Psyllid ID: psy17194

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-
Protein Sequence
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPESNPFRSGFK
Secondary Structure (PSIPRED)
cccHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccHHccccccHHHHHHHHHHHHHHHHcHcHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEcccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHcccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccHccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccEEEEEEHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKlqepksqrKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALnesryhtkphhrehaegedsatgVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQgvgsafadtsgLAMIADRFTEENERSQALGIALAFISFgclvappfggalyqfagKEIPFLILAFVSLLDGFMLLLVMKPVKeqlnqkkpeshstvpiwklfmdpyiAVCSGALLMANVALAFLEPTISLWiednlttdnwkigmiwlpaffphVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFiipfstsyqmlmlpicgicfGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAigpivaggivdAIGFTALNFLIAFMNILYAPVLIYLKniydfkpfeneanilmadppkkeyqtytmqdrqpvandyKNHLEYSmqetsidenkqpaanvgtngvsnpfkasapstgppetppfggalyqfagKEIPFLILAFVSLLDGFMLLLVMKPVKeqlnqkkpeshstvpiwklfmdpyiAVCSGALLMANVALAFLEPTISLWiednlttdnwkigmiwlpaffphVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFiipfstsyqmlmlpicgicfGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAigpivaggivdAIGFTALNFLIAFMNILYAPVLIYLKniydfkpfeneanilmadppkkeyqtytmqdrqpvandyKNHLEYSmqetsidenkqpaanvgtngvsnpfkasapstgppesnpfrsgfk
Flexible Loop (DISEMBL)
meafkacwtvvgtlkvpvlnleVNEVKDIVWeklqepksqrklILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKeqlnqkkpeshstvpiWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKeqlnqkkpeshstvpiWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFkasapstgppesnpfrsgfk
Low Complexity Region (SEG)
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPESNPFRSGFK
Disordered region (IsUnstruct)
***FKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEED**************************TGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV*************TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILM*********************************************************************FGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV*************TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILM***************************************************************************
Disordered Region (DISOPRED)
********TVVGTLKVPV***********************KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLV**********************KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYD**************************************LEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVM**********************LFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL********************************************************************************************
Disordered Region (DISEMBL)
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRY**************SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ*********STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK*********ETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ*********STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK*******************
Disordered Region (DISPRO)
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAW*****************PHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKE**********STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR***************************ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ*********STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR***********************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEAFKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPESNPFRSGFK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	871	2.2.26 [Sep-21-2011]
O17444	578	Vesicular acetylcholine t	yes	N/A	0.557	0.840	0.770	0.0
P81721	515	Vesicular acetylcholine t	N/A	N/A	0.536	0.906	0.553	1e-150
Q91498	511	Vesicular acetylcholine t	N/A	N/A	0.536	0.913	0.553	1e-150
Q91514	511	Vesicular acetylcholine t	N/A	N/A	0.551	0.939	0.542	1e-149
Q08C75	513	Probable vesicular acetyl	yes	N/A	0.566	0.961	0.524	1e-146
P34711	532	Vesicular acetylcholine t	yes	N/A	0.564	0.924	0.524	1e-144
P59845	493	Probable vesicular acetyl	no	N/A	0.520	0.918	0.535	1e-136
Q16572	532	Vesicular acetylcholine t	yes	N/A	0.537	0.879	0.523	1e-132
Q62666	530	Vesicular acetylcholine t	yes	N/A	0.529	0.869	0.516	1e-132
O35304	530	Vesicular acetylcholine t	yes	N/A	0.529	0.869	0.514	1e-132

>sp|O17444|VACHT_DROME Vesicular acetylcholine transporter OS=Drosophila melanogaster GN=VAChT PE=2 SV=2

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/488 (77%), Positives = 420/488 (86%), Gaps = 2/488 (0%)

Query: 11  VGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL 70
           + + ++PV+NLEV EVKDIVWEK+QEP +QR+LILVIVS ALLLDNMLYMVIVPIIPDYL
Sbjct: 1   MASFQIPVINLEVREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYL 60

Query: 71  RFIGAWGEEDQLQALNES-RYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALI 129
           R IG++ +      L ++      P H +H  G+DSATG+LFASKAIVQLMVNPFSG LI
Sbjct: 61  REIGSFDDGPTPPPLRDNITGKIIPVHHDH-HGQDSATGILFASKAIVQLMVNPFSGGLI 119

Query: 130 DRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 189
           D+IGYDLPMMIGL IMF STA+FACG SY VLFFARSLQG GSAFADT+GLAMIADRFTE
Sbjct: 120 DKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTE 179

Query: 190 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV 249
           ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILA V LLDG MLLLVMKPV
Sbjct: 180 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKPV 239

Query: 250 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW 309
           KE + Q K      +PIW+L MDPYIAVC+GAL M+NVALAFLEPTISLW+EDN+TTDNW
Sbjct: 240 KEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNW 299

Query: 310 KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLML 369
           KIGM+WLPAFFPHV GVVITVK+A+ YP +QWLM A GL LEG  CFIIPF + Y+MLML
Sbjct: 300 KIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLML 359

Query: 370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA 429
           PIC ICFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+A
Sbjct: 360 PICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEA 419

Query: 430 IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPV 489
           IGFTALNFLIAF N+ Y PVL  L+NIYDFKPFENEANILM DPP KEYQTY M D++PV
Sbjct: 420 IGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQKPV 479

Query: 490 ANDYKNHL 497
               KNHL
Sbjct: 480 EGGVKNHL 487

Involved in acetylcholine transport into synaptic vesicles.
Drosophila melanogaster (taxid: 7227)

>sp|P81721|VACHT_TORCA Vesicular acetylcholine transporter OS=Torpedo californica PE=2 SV=2

 Score =  532 bits (1371), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 270/488 (55%), Positives = 344/488 (70%), Gaps = 21/488 (4%)

Query: 23  VNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAW------ 76
           + E    +   + EP+ +RK++LVIV  A+LLDNMLYMVIVPIIP+YL  I  +      
Sbjct: 21  IGERSKRISGAMNEPRRKRKILLVIVCIAMLLDNMLYMVIVPIIPNYLETIRTYKLVYIT 80

Query: 77  ----GEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI 132
               G    L  LN ++       R     ED   GVLFASKAI+QL+ NPF+G  IDR+
Sbjct: 81  TPSNGTNGSL--LNSTQRAVL--ERNPNANEDIQIGVLFASKAILQLLSNPFTGTFIDRV 136

Query: 133 GYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENE 192
           GYD+P++IGL IMF ST  FA G SY VLF ARSLQG+GSAFADTSG+AMIAD++TEE+E
Sbjct: 137 GYDIPLLIGLTIMFFSTITFAFGESYAVLFAARSLQGLGSAFADTSGIAMIADKYTEESE 196

Query: 193 RSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ 252
           R+QALGIALAFISFG LVAPPFGG LYQFAGK +PFL+L+FV LLDG +LL+V+ P   +
Sbjct: 197 RTQALGIALAFISFGSLVAPPFGGVLYQFAGKWVPFLVLSFVCLLDGILLLMVVTPFASR 256

Query: 253 LNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIG 312
             +   +     PI+KL +DPYIAV +GAL   N+ LAFLEPTIS W++  +    W++G
Sbjct: 257 TRENMLQG---TPIYKLMIDPYIAVVAGALTTCNIPLAFLEPTISNWMKKTMNASEWQMG 313

Query: 313 MIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPIC 372
           + WLPAFFPH+ GV ITVKLA  YP YQW   AVGLV+ G     IP   +++ L++P+C
Sbjct: 314 ITWLPAFFPHILGVYITVKLAAKYPNYQWFYGAVGLVIIGASSCTIPACRNFEELIIPLC 373

Query: 373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF 432
            +CFG+ALVDTALLPTL +LVD+RYVSVYGS+YAIADISYS+AYA+GPI+AG IV  +GF
Sbjct: 374 ALCFGIALVDTALLPTLAFLVDIRYVSVYGSVYAIADISYSVAYALGPIMAGQIVHDLGF 433

Query: 433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR----QP 488
             LN  +  +NILYAP L++L+N+   KP  +E NIL+ + PK  Y T  M++R    +P
Sbjct: 434 VQLNLGMGLVNILYAPALLFLRNVCQMKPSLSERNILLEEGPKGLYDTIIMEERKAAKEP 493

Query: 489 VANDYKNH 496
             +   NH
Sbjct: 494 HGSSSGNH 501

Involved in acetylcholine transport into synaptic vesicles.

Torpedo californica (taxid: 7787)

>sp|Q91498|VACHT_TORMA Vesicular acetylcholine transporter OS=Torpedo marmorata PE=2 SV=2

 Score =  531 bits (1368), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 270/488 (55%), Positives = 345/488 (70%), Gaps = 21/488 (4%)

Query: 23  VNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAW------ 76
           + E    +   + EP+ +RK++LVIV  A+LLDNMLYMVIVPIIP+YL  I  +      
Sbjct: 17  IGERSKRISGAMNEPRRKRKILLVIVCIAMLLDNMLYMVIVPIIPNYLETIRTYKLVYIT 76

Query: 77  ----GEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI 132
               G    L  LN ++       R     ED   GVLFASKAI+QL+ NPF+G  IDR+
Sbjct: 77  TPSNGTNGSL--LNSTQRAVL--ERNPNANEDIQIGVLFASKAILQLLSNPFTGTFIDRV 132

Query: 133 GYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENE 192
           GYD+P++IGL IMF ST  FA G SY +LF ARSLQG+GSAFADTSG+AMIAD++TEE+E
Sbjct: 133 GYDIPLLIGLTIMFFSTITFAFGESYAILFAARSLQGLGSAFADTSGIAMIADKYTEESE 192

Query: 193 RSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ 252
           R+QALGIALAFISFG LVAPPFGG LYQFAGK +PFL+L+FV LLDG +LL+V+ P    
Sbjct: 193 RTQALGIALAFISFGSLVAPPFGGVLYQFAGKWVPFLVLSFVCLLDGILLLMVVTPFA-- 250

Query: 253 LNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIG 312
            ++ +  +    PI+KL +DPYIAV +GAL   N+ LAFLEPTIS W++  +    W++G
Sbjct: 251 -SRTRVNTLQGTPIYKLMIDPYIAVVAGALTTCNIPLAFLEPTISNWMKKTMNASEWQMG 309

Query: 313 MIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPIC 372
           + WLPAFFPH+ GV ITVKLA  YP YQWL  AVGLV+ G     IP   +++ L++P+C
Sbjct: 310 ITWLPAFFPHILGVYITVKLAAKYPNYQWLYGAVGLVIIGASSCTIPACRNFEELIIPLC 369

Query: 373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF 432
            +CFG+ALVDTALLPTL +LVD+RYVSVYGS+YAIADISYS+AYA+GPI+AG IV  +GF
Sbjct: 370 ALCFGIALVDTALLPTLAFLVDIRYVSVYGSVYAIADISYSVAYALGPIMAGQIVHDLGF 429

Query: 433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR----QP 488
             LN  +  +NILYAP L++L+N+   KP  +E NIL+ + PK  Y T  M++R    +P
Sbjct: 430 VQLNLGMGLVNILYAPGLLFLRNVCQMKPSLSERNILLEEGPKGLYDTIIMEERKEAKEP 489

Query: 489 VANDYKNH 496
                 NH
Sbjct: 490 HGTSSGNH 497

Involved in acetylcholine transport into synaptic vesicles.

Torpedo marmorata (taxid: 7788)

>sp|Q91514|VACHT_TORTO Vesicular acetylcholine transporter OS=Torpedo torpedo PE=2 SV=1

 Score =  529 bits (1362), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 273/503 (54%), Positives = 350/503 (69%), Gaps = 23/503 (4%)

Query: 10  VVGTLKVPV--LNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIP 67
           VVG  K  +  ++  + E    +   + EP  +RK++LVIV  A+LLDNMLYMVIVPI+P
Sbjct: 2   VVGQAKAAMGKISSAIGERSKRISGAMNEPLRKRKILLVIVCIAMLLDNMLYMVIVPIVP 61

Query: 68  DYLRFIGAW----------GEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIV 117
           +YL  I  +          G    L  LN ++       R     ED   GVLFASKAI+
Sbjct: 62  NYLETIRTYKLVYITIPSNGTNGSL--LNSTQRAVL--ERNPNANEDIQIGVLFASKAIL 117

Query: 118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADT 177
           QL+ NPF+G  IDR+GYD+P++IGL IMF ST  FA G SY +LF ARSLQG+GSAFADT
Sbjct: 118 QLLSNPFTGTFIDRVGYDIPLLIGLTIMFFSTITFAFGESYAILFAARSLQGLGSAFADT 177

Query: 178 SGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLL 237
           SG+AMIAD++TEE+ER+QALGIALAFISFG LVAPPFGG LYQFAGK +PFL+L+FV LL
Sbjct: 178 SGIAMIADKYTEESERTQALGIALAFISFGSLVAPPFGGVLYQFAGKWVPFLVLSFVCLL 237

Query: 238 DGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTIS 297
           DG +LL+V+ P     ++ +  +    PI KL +DPYIAV +GAL   N+ LAFLEPTIS
Sbjct: 238 DGILLLMVVTPFA---SRTRGNTLQGTPIHKLMIDPYIAVVAGALTTCNIPLAFLEPTIS 294

Query: 298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI 357
            W++  +    W++G+ WLPAFFPH+ GV ITVKLA  YP YQWL  A GLV+ G+    
Sbjct: 295 NWMKKTMNASEWQMGITWLPAFFPHILGVYITVKLAAKYPNYQWLYGAFGLVIIGVSSCT 354

Query: 358 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA 417
           IP   +++ L++P+C +CFG+ALVDTALLPTL +LVD+RYVSVYGS+YAIADISYS+AYA
Sbjct: 355 IPACRNFEELIIPLCALCFGIALVDTALLPTLAFLVDIRYVSVYGSVYAIADISYSVAYA 414

Query: 418 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKE 477
           +GPI+AG IV  +GF  LN  +  +NILYAP L++L+N+   KP  +E NIL+ D PK  
Sbjct: 415 LGPIMAGQIVHDLGFVQLNLGMGLVNILYAPALLFLRNVCQMKPSLSERNILLEDGPKGL 474

Query: 478 YQTYTMQDR----QPVANDYKNH 496
           Y T  M++R    +P      NH
Sbjct: 475 YDTIIMEERKAAKEPHGTSSGNH 497

Involved in acetylcholine transport into synaptic vesicles.

Torpedo torpedo (taxid: 30481)

>sp|Q08C75|VACHA_DANRE Probable vesicular acetylcholine transporter-A OS=Danio rerio GN=slc18a3a PE=2 SV=1

 Score =  521 bits (1341), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 270/515 (52%), Positives = 349/515 (67%), Gaps = 22/515 (4%)

Query: 22  EVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQ 81
           E+ E    +   +Q+P+ QR++ILVIV  ALLLDNMLYMVIVPI+PDYL  + +  E+  
Sbjct: 19  EMGERTKQLGNAIQDPERQRRIILVIVCVALLLDNMLYMVIVPIVPDYLAHLESESEQAH 78

Query: 82  LQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIG 141
           ++  N S   T+       E  D   GVLFASKAI+QL+VNP +G  IDR+GYD+P++IG
Sbjct: 79  VKG-NSSINITQ------NENFDLQIGVLFASKAILQLLVNPLTGTFIDRVGYDIPLLIG 131

Query: 142 LCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL 201
           L IMF+ST +FA   +Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE+ERS+ALGIAL
Sbjct: 132 LSIMFVSTCIFAFAENYATLFMARSLQGLGSAFADTSGIAMIADKYAEESERSRALGIAL 191

Query: 202 AFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH 261
           AFISFG L APPFGG LY+FAGK  PF+ LA V L DG + L V+KP   +  +  P   
Sbjct: 192 AFISFGSLAAPPFGGVLYEFAGKRFPFIALACVCLADGILCLTVLKPFSSRTRENMPVG- 250

Query: 262 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFP 321
              PI+KL +DPYIAV +GAL   N+ LAFLEPTI+ W+E+ +    W+IG+ WLPAFFP
Sbjct: 251 --TPIYKLMIDPYIAVVAGALTTCNIPLAFLEPTIANWMEETMNASQWQIGITWLPAFFP 308

Query: 322 HVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALV 381
           H+ GV +TVKLA  YP  QW   A+G+V+ G    I+P   +++ L++P+CG+CFG+ALV
Sbjct: 309 HILGVYLTVKLAAKYPHLQWFYGALGMVIIGASSCIVPACKNFEQLIIPLCGVCFGIALV 368

Query: 382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF 441
           DTALLPTL +LVDVR+VSVYGS+YAIADISY +AYA+GPIVAG IV  +GF  LN  +  
Sbjct: 369 DTALLPTLAFLVDVRHVSVYGSVYAIADISYCVAYALGPIVAGKIVHDLGFVQLNLGMGL 428

Query: 442 MNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSM 501
            N+LYAP L+ L+N+   KP  +E N+L+ +     Y T  M++RQ   + Y +    S 
Sbjct: 429 ANVLYAPALLLLRNVSLMKPSHSERNMLLEEGATGLYDTIRMEERQRKKHGYSS----SG 484

Query: 502 QETSIDENKQPAANVGTNGVSNPFKASAPSTGPPE 536
               IDEN   A      G S  F  S   T  PE
Sbjct: 485 NCVPIDENGTFA------GQSKSF--SEEETSEPE 511

Involved in acetylcholine transport into synaptic vesicles.

Danio rerio (taxid: 7955)

>sp|P34711|UNC17_CAEEL Vesicular acetylcholine transporter unc-17 OS=Caenorhabditis elegans GN=unc-17 PE=2 SV=1

 Score =  514 bits (1323), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/511 (52%), Positives = 352/511 (68%), Gaps = 19/511 (3%)

Query: 14  LKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFI 73
             VPV+N +   +K    + L++  +Q+K +LVIVS ALLLDNMLYMVIVPIIP YLR I
Sbjct: 3   FNVPVINRDSEILKADAKKWLEQQDNQKKCVLVIVSIALLLDNMLYMVIVPIIPKYLRDI 62

Query: 74  GAW-----GEEDQLQALNESRYHTKP-HHREHAEGEDSATGVLFASKAIVQLMVNPFSGA 127
             +     G  ++   L    Y  +    R +   E+   G LFASKA++Q+ VNPFSG 
Sbjct: 63  HNYQVTFEGYHNETSQLANGTYLVREVGGRINFLDEELELGWLFASKALLQIFVNPFSGY 122

Query: 128 LIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRF 187
           +IDR+GY++PM++GLC MF STA+FA G+SYGVL FARSLQG GSAFADTSGLAMIADRF
Sbjct: 123 IIDRVGYEIPMILGLCTMFFSTAIFALGKSYGVLLFARSLQGFGSAFADTSGLAMIADRF 182

Query: 188 TEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK 247
           TEENERS ALGIALAFISFGCLVAPPFG  LY  AGK +PFLIL+FV L D   + +V+ 
Sbjct: 183 TEENERSAALGIALAFISFGCLVAPPFGSVLYSLAGKPVPFLILSFVCLADAIAVFMVIN 242

Query: 248 PVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-TT 306
           P +   +    +   T P+W+LFMDP+IA CSGAL+MANV+LAFLEPTI+ W+ + +  T
Sbjct: 243 PHRRGTDSHGEKVQGT-PMWRLFMDPFIACCSGALIMANVSLAFLEPTITTWMSEMMPDT 301

Query: 307 DNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQM 366
             W +G+IWLP FFPHV GV +TVK+ + +P + W +  VGL +EG+ CF IP++TS   
Sbjct: 302 PGWLVGVIWLPPFFPHVLGVYVTVKMLRAFPHHTWAIAMVGLAMEGIACFAIPYTTSVMQ 361

Query: 367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGI 426
           L++P+  +CFG+AL+DT+LLP LG+LVD R+VSVYGS+YAIADISYSLAYA GPI+AG I
Sbjct: 362 LVIPLSFVCFGIALIDTSLLPMLGHLVDTRHVSVYGSVYAIADISYSLAYAFGPIIAGWI 421

Query: 427 VDAIGFTALNFLIAFMNILYAPVLIYLKNIYDF-----KPFENEANILMADPPKKEYQTY 481
           V   GFTALN +I   N+ YAPVL  L+ ++ +     K    E   L +  P   Y   
Sbjct: 422 VTNWGFTALNIIIFATNVTYAPVLFLLRKVHSYDTLGAKGDTAEMTQLNSSAPAGGY--- 478

Query: 482 TMQDRQPVANDYKNHLEYSMQETSIDENKQP 512
              + +P A   +++  +  Q++  ++ + P
Sbjct: 479 ---NGKPEATTAESYQGWEDQQSYQNQAQIP 506

Involved in acetylcholine transport into synaptic vesicles.

Caenorhabditis elegans (taxid: 6239)

>sp|P59845|VACHB_DANRE Probable vesicular acetylcholine transporter-B OS=Danio rerio GN=slc18a3b PE=2 SV=1

 Score =  487 bits (1254), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/476 (53%), Positives = 331/476 (69%), Gaps = 23/476 (4%)

Query: 12  GTLKVPVLNLE-VNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL 70
           G  +  VL L  + E    +   L+EP+ +R+L+LV+V  ALLLDNMLYMVIVPIIPDYL
Sbjct: 8   GLAQSAVLQLSAMGERSRELGGALREPERKRRLLLVVVCVALLLDNMLYMVIVPIIPDYL 67

Query: 71  RFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALID 130
                                 +      +   D   GVLFASKA++QL+VNP SG  ID
Sbjct: 68  -------------------ADLRGERGNSSADLDIQIGVLFASKALLQLLVNPLSGTFID 108

Query: 131 RIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE 190
           R+GYDLP++IGL +MFLST +FA   +YG LF ARSLQG+GSAFADTSG+AMIAD+FTEE
Sbjct: 109 RVGYDLPLLIGLLVMFLSTCIFAFAENYGTLFAARSLQGLGSAFADTSGIAMIADKFTEE 168

Query: 191 NERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVK 250
            ERS+ALGIALAFISFG LVAPPFGG LY+FAGK +PF++LA V L DG +LL V+KP  
Sbjct: 169 AERSRALGIALAFISFGSLVAPPFGGILYEFAGKRVPFIVLACVCLADGVLLLTVVKPFS 228

Query: 251 EQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK 310
           ++  +  P      PI +L +DPYIAV +GAL + N+ LAFLEPTI+ W+E  +    W+
Sbjct: 229 DRTRENMPVG---TPIHRLMVDPYIAVVAGALTVCNIPLAFLEPTIANWMESTMDASKWQ 285

Query: 311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP 370
           +G++WLPAF PHV GV ITV+LA  YP  QW   A+G+V+ G     +P   ++  L+ P
Sbjct: 286 MGLVWLPAFLPHVLGVYITVRLAARYPERQWFYGALGMVIIGASSCTVPACKTFGELVFP 345

Query: 371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI 430
           +CGICFG+ALVDTALLPTL +LVDVR+VSVYGS+YAIADISYS+AYA+GP+VAG IV  +
Sbjct: 346 LCGICFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYSVAYAMGPVVAGQIVHNL 405

Query: 431 GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR 486
           GF  LN  +  +N+LYAP L+ L+ +   KP  +E N+L+ + P   Y +  +++R
Sbjct: 406 GFVQLNLGMGLVNVLYAPALLLLRPVCQIKPSFSERNVLLEEGPSGLYDSIRLEER 461

Involved in acetylcholine transport into synaptic vesicles.

Danio rerio (taxid: 7955)

>sp|Q16572|VACHT_HUMAN Vesicular acetylcholine transporter OS=Homo sapiens GN=SLC18A3 PE=1 SV=2

 Score =  474 bits (1220), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/495 (52%), Positives = 329/495 (66%), Gaps = 27/495 (5%)

Query: 24  NEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGE----- 78
            ++ + V   LQEP+ QR+L+LVIV  ALLLDNMLYMVIVPI+PDY+  +   GE     
Sbjct: 15  TKLSEAVGAALQEPRRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGGEGPTRT 74

Query: 79  ----EDQL---QALNESRYHTKP--------------HHREHAEGEDSATGVLFASKAIV 117
               E  L      N S Y                    R   E ED   GVLFASKAI+
Sbjct: 75  PEVWEPTLPLPTPANASAYTANTSASPTAAWPAGSALRPRYPTESEDVKIGVLFASKAIL 134

Query: 118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADT 177
           QL+VNP SG  IDR+ YD+P++IGL +MF ST LFA    Y  LF ARSLQG+GSAFADT
Sbjct: 135 QLLVNPLSGPFIDRMSYDVPLLIGLGVMFASTVLFAFAEDYATLFAARSLQGLGSAFADT 194

Query: 178 SGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLL 237
           SG+AMIAD++ EE ERS+ALG+ALAFISFG LVAPPFGG LY+FAGK +PFL+LA VSL 
Sbjct: 195 SGIAMIADKYPEEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVSLF 254

Query: 238 DGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTIS 297
           D  +LL V KP       +      T PI +L +DPYIAV +GAL   N+ LAFLEPTI+
Sbjct: 255 DALLLLAVAKPFSAAARARANLPVGT-PIHRLMLDPYIAVVAGALTTCNIPLAFLEPTIA 313

Query: 298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI 357
            W++  +    W++GM WLPAF PHV GV +TV+LA  YP  QWL  A+GL + G    I
Sbjct: 314 TWMKHTMAASEWEMGMAWLPAFVPHVLGVYLTVRLAARYPHLQWLYGALGLAVIGASSCI 373

Query: 358 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA 417
           +P   S+  L++ +CG+CFG+ALVDTALLPTL +LVDVR+VSVYGS+YAIADISYS+AYA
Sbjct: 374 VPACRSFAPLVVSLCGLCFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYSVAYA 433

Query: 418 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKE 477
           +GPIVAG IV ++GF  L+  +   N+LYAPVL+ L+N+       +E ++L+ +PP+  
Sbjct: 434 LGPIVAGHIVHSLGFEQLSLGMGLANLLYAPVLLLLRNVGLLTRSRSERDVLLDEPPQGL 493

Query: 478 YQTYTMQDRQPVAND 492
           Y    +++R     D
Sbjct: 494 YDAVRLRERPVSGQD 508

Involved in acetylcholine transport into synaptic vesicles.

Homo sapiens (taxid: 9606)

>sp|Q62666|VACHT_RAT Vesicular acetylcholine transporter OS=Rattus norvegicus GN=Slc18a3 PE=2 SV=2

 Score =  473 bits (1218), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/492 (51%), Positives = 330/492 (67%), Gaps = 31/492 (6%)

Query: 24  NEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQL- 82
            ++ + V   LQEP+ QR+L+LVIV  ALLLDNMLYMVIVPI+PDY+  +    E   L 
Sbjct: 15  TKLSEAVGAALQEPQRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGSEGPTLV 74

Query: 83  ---------------------------QALNESRYHTKPHHREHAEGEDSATGVLFASKA 115
                                       A   +R   +P  R   E ED   GVLFASKA
Sbjct: 75  SEVWEPTLPPPTLANASAYLANTSASPTAAGSARSILRP--RYPTESEDVKIGVLFASKA 132

Query: 116 IVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFA 175
           I+QL+VNP SG  IDR+ YD+P++IGL +MF ST +FA    Y  LF ARSLQG+GSAFA
Sbjct: 133 ILQLLVNPLSGPFIDRMSYDVPLLIGLGVMFASTVMFAFAEDYATLFAARSLQGLGSAFA 192

Query: 176 DTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVS 235
           DTSG+AMIAD++ EE ERS+ALG+ALAFISFG LVAPPFGG LY+FAGK +PFL+LA VS
Sbjct: 193 DTSGIAMIADKYPEEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVS 252

Query: 236 LLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPT 295
           L D  +LL V KP       +      T PI +L +DPYIAV +GAL   N+ LAFLEPT
Sbjct: 253 LFDALLLLAVAKPFSAAARARANLPVGT-PIHRLMLDPYIAVVAGALTTCNIPLAFLEPT 311

Query: 296 ISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC 355
           I+ W++  +    W++GM+WLPAF PHV GV +TV+LA  YP  QWL  A+GL + G+  
Sbjct: 312 IATWMKHTMAASEWEMGMVWLPAFVPHVLGVYLTVRLAARYPHLQWLYGALGLAVIGVSS 371

Query: 356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA 415
            ++P   S+  L++ +CG+CFG+ALVDTALLPTL +LVDVR+VSVYGS+YAIADISYS+A
Sbjct: 372 CVVPACRSFAPLVVSLCGLCFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYSVA 431

Query: 416 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPK 475
           YA+GPIVAG IV ++GF  L+  +   N+LYAPVL+ L+N+       +E ++L+ +PP+
Sbjct: 432 YALGPIVAGHIVHSLGFEQLSLGMGLANLLYAPVLLLLRNVGLLTRSRSERDVLLDEPPQ 491

Query: 476 KEYQTYTMQDRQ 487
             Y    +++ Q
Sbjct: 492 GLYDAVRLREVQ 503

Involved in acetylcholine transport into synaptic vesicles.

Rattus norvegicus (taxid: 10116)

>sp|O35304|VACHT_MOUSE Vesicular acetylcholine transporter OS=Mus musculus GN=Slc18a3 PE=2 SV=1

 Score =  472 bits (1215), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 253/492 (51%), Positives = 329/492 (66%), Gaps = 31/492 (6%)

Query: 24  NEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQL- 82
            ++ + V   LQEP+ QR+L+LVIV  ALLLDNMLYMVIVPI+PDY+  +    E   L 
Sbjct: 15  TKLSEAVGAALQEPQRQRRLVLVIVCVALLLDNMLYMVIVPIVPDYIAHMRGGSESPTLI 74

Query: 83  ---------------------------QALNESRYHTKPHHREHAEGEDSATGVLFASKA 115
                                       A   +R   +P  R   E ED   GVLFASKA
Sbjct: 75  SEVWEPTLPPPTLANASAYLANTSASPTAAGSARSILRP--RYPTESEDVKIGVLFASKA 132

Query: 116 IVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFA 175
           I+QL+VNP SG  IDR+ YD+P++IGL +MF ST +FA    Y   F ARSLQG+GSAFA
Sbjct: 133 ILQLLVNPLSGPFIDRMSYDVPLLIGLGVMFASTVMFAFAEDYATFFAARSLQGLGSAFA 192

Query: 176 DTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVS 235
           DTSG+AMIAD++ EE ERS+ALG+ALAFISFG LVAPPFGG LY+FAGK +PFL+LA VS
Sbjct: 193 DTSGIAMIADKYPEEPERSRALGVALAFISFGSLVAPPFGGILYEFAGKRVPFLVLAAVS 252

Query: 236 LLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPT 295
           L D  +LL V KP       +      T PI +L +DPYIAV +GAL   N+ LAFLEPT
Sbjct: 253 LFDALLLLAVAKPFSAAARARANLPVGT-PIHRLMLDPYIAVVAGALTTCNIPLAFLEPT 311

Query: 296 ISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC 355
           I+ W++  +    W++GM+WLPAF PHV GV +TV+LA  YP  QWL  A+GL + G+  
Sbjct: 312 IATWMKHTMAASEWEMGMVWLPAFVPHVLGVYLTVRLAARYPHLQWLYGALGLAVIGVSS 371

Query: 356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA 415
            ++P   S+  L++ +CG+CFG+ALVDTALLPTL +LVDVR+VSVYGS+YAIADISYS+A
Sbjct: 372 CVVPACRSFAPLVVSLCGLCFGIALVDTALLPTLAFLVDVRHVSVYGSVYAIADISYSVA 431

Query: 416 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPK 475
           YA+GPIVAG IV ++GF  L+  +   N+LYAPVL+ L+N+       +E ++L+ +PP+
Sbjct: 432 YALGPIVAGHIVHSLGFEQLSLGMGLANLLYAPVLLLLRNVGLLTRSRSERDVLLDEPPQ 491

Query: 476 KEYQTYTMQDRQ 487
             Y    +++ Q
Sbjct: 492 GLYDAVRLREVQ 503

Involved in acetylcholine transport into synaptic vesicles.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	871
270002008	743	hypothetical protein TcasGA2_TC000945 [T	0.578	0.678	0.776	0.0
91077000	548	PREDICTED: similar to vesamicol binding	0.564	0.897	0.789	0.0
242023366	604	Vesicular acetylcholine transporter, put	0.561	0.809	0.783	0.0
345494254	675	PREDICTED: vesicular acetylcholine trans	0.563	0.727	0.774	0.0
347967725	587	AGAP002369-PA [Anopheles gambiae str. PE	0.578	0.858	0.765	0.0
157126210	582	vesamicol binding protein, putative [Aed	0.572	0.857	0.768	0.0
328782367	688	PREDICTED: vesicular acetylcholine trans	0.594	0.752	0.723	0.0
322792819	584	hypothetical protein SINV_05992 [Solenop	0.593	0.885	0.731	0.0
332028561	585	Vesicular acetylcholine transporter [Acr	0.570	0.849	0.756	0.0
170030542	585	vesamicol binding protein [Culex quinque	0.564	0.841	0.768	0.0

>gi|270002008|gb|EEZ98455.1| hypothetical protein TcasGA2_TC000945 [Tribolium castaneum]

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/506 (77%), Positives = 454/506 (89%), Gaps = 2/506 (0%)

Query: 4   FKACWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIV 63
             ACW++     +P+LN+E  E+K+++W K+QEP++QRKLILVIVS ALLLDNMLYMVIV
Sbjct: 187 LSACWSLAAMTTIPILNMEWGELKEVMWTKVQEPRTQRKLILVIVSIALLLDNMLYMVIV 246

Query: 64  PIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP 123
           PIIPDYLR+IGA+ +E  +   N +     P+  +H  G+DSATG+LFASKAIVQLMVNP
Sbjct: 247 PIIPDYLRYIGAYNDEVTVPG-NATLPPGTPYKHDH-HGQDSATGILFASKAIVQLMVNP 304

Query: 124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMI 183
           FSGALIDRIGYD+PMMIGL IMFLSTA+FACGRSYG+LFFARSLQGVGSAFADTSGLAMI
Sbjct: 305 FSGALIDRIGYDIPMMIGLTIMFLSTAVFACGRSYGLLFFARSLQGVGSAFADTSGLAMI 364

Query: 184 ADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLL 243
           ADRFTEENERS+ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAFVSL+DGFMLL
Sbjct: 365 ADRFTEENERSKALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFVSLMDGFMLL 424

Query: 244 LVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN 303
           LVMKP+K QL +       +VPIW+LFMDPYIAVCSGAL+M+NVALAFLEPTISLW+EDN
Sbjct: 425 LVMKPLKTQLKEAGLAKPPSVPIWRLFMDPYIAVCSGALMMSNVALAFLEPTISLWMEDN 484

Query: 304 LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS 363
           LTTDNWKIGMIWLPAFFPHVFGV+ TVK+AK YP YQWLM A GL LEGLCCFIIPF++S
Sbjct: 485 LTTDNWKIGMIWLPAFFPHVFGVIFTVKMAKKYPQYQWLMAAGGLALEGLCCFIIPFASS 544

Query: 364 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA 423
           Y++LM+PICGICFG+AL+DTALLPTLGYLVDVRYVS+YGSIYAIADISYS+AYAIGPI+A
Sbjct: 545 YKVLMIPICGICFGVALIDTALLPTLGYLVDVRYVSIYGSIYAIADISYSVAYAIGPIIA 604

Query: 424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTM 483
           GG+V+AIGFTALN  IAF N+LYAPVL+YLK+IYDFKPFENEANILM+DPP KEYQTY+M
Sbjct: 605 GGVVEAIGFTALNVGIAFSNLLYAPVLMYLKHIYDFKPFENEANILMSDPPNKEYQTYSM 664

Query: 484 QDRQPVANDYKNHLEYSMQETSIDEN 509
           Q+++P+++D +NHLEY  QET+ D N
Sbjct: 665 QEQKPISDDIQNHLEYKQQETNFDSN 690

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91077000|ref|XP_975499.1| PREDICTED: similar to vesamicol binding protein, putative [Tribolium castaneum]

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/494 (78%), Positives = 449/494 (90%), Gaps = 2/494 (0%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +P+LN+E  E+K+++W K+QEP++QRKLILVIVS ALLLDNMLYMVIVPIIPDYLR+IGA
Sbjct: 4   IPILNMEWGELKEVMWTKVQEPRTQRKLILVIVSIALLLDNMLYMVIVPIIPDYLRYIGA 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           + +E  +   N +     P+  +H  G+DSATG+LFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  YNDEVTVPG-NATLPPGTPYKHDH-HGQDSATGILFASKAIVQLMVNPFSGALIDRIGYD 121

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           +PMMIGL IMFLSTA+FACGRSYG+LFFARSLQGVGSAFADTSGLAMIADRFTEENERS+
Sbjct: 122 IPMMIGLTIMFLSTAVFACGRSYGLLFFARSLQGVGSAFADTSGLAMIADRFTEENERSK 181

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAFVSL+DGFMLLLVMKP+K QL +
Sbjct: 182 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFVSLMDGFMLLLVMKPLKTQLKE 241

Query: 256 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW 315
                  +VPIW+LFMDPYIAVCSGAL+M+NVALAFLEPTISLW+EDNLTTDNWKIGMIW
Sbjct: 242 AGLAKPPSVPIWRLFMDPYIAVCSGALMMSNVALAFLEPTISLWMEDNLTTDNWKIGMIW 301

Query: 316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC 375
           LPAFFPHVFGV+ TVK+AK YP YQWLM A GL LEGLCCFIIPF++SY++LM+PICGIC
Sbjct: 302 LPAFFPHVFGVIFTVKMAKKYPQYQWLMAAGGLALEGLCCFIIPFASSYKVLMIPICGIC 361

Query: 376 FGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
           FG+AL+DTALLPTLGYLVDVRYVS+YGSIYAIADISYS+AYAIGPI+AGG+V+AIGFTAL
Sbjct: 362 FGVALIDTALLPTLGYLVDVRYVSIYGSIYAIADISYSVAYAIGPIIAGGVVEAIGFTAL 421

Query: 436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN 495
           N  IAF N+LYAPVL+YLK+IYDFKPFENEANILM+DPP KEYQTY+MQ+++P+++D +N
Sbjct: 422 NVGIAFSNLLYAPVLMYLKHIYDFKPFENEANILMSDPPNKEYQTYSMQEQKPISDDIQN 481

Query: 496 HLEYSMQETSIDEN 509
           HLEY  QET+ D N
Sbjct: 482 HLEYKQQETNFDSN 495

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242023366|ref|XP_002432105.1| Vesicular acetylcholine transporter, putative [Pediculus humanus corporis] gi|212517479|gb|EEB19367.1| Vesicular acetylcholine transporter, putative [Pediculus humanus corporis]

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/494 (78%), Positives = 443/494 (89%), Gaps = 5/494 (1%)

Query: 13  TLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRF 72
           T  +PV+NLEV E+KDI+W KLQEP  QR+L+L+IVS ALLLDNMLYMVIVPIIPDYLR+
Sbjct: 11  TFNIPVINLEVGELKDIIWAKLQEPHYQRRLVLIIVSIALLLDNMLYMVIVPIIPDYLRY 70

Query: 73  IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI 132
           IGA+ + D +   N ++   K  H     G+D++TGVLFASKAIVQLM+NPFSGALIDRI
Sbjct: 71  IGAYEQIDVILPPNGTQGPVKHDHH----GQDTSTGVLFASKAIVQLMINPFSGALIDRI 126

Query: 133 GYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENE 192
           GYD+PMMIGL IMFLSTA+FACGRSYG+LFFARSLQGVGSAFADTSGLAMIADRFTEE E
Sbjct: 127 GYDIPMMIGLTIMFLSTAVFACGRSYGLLFFARSLQGVGSAFADTSGLAMIADRFTEEAE 186

Query: 193 RSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ 252
           RS+ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAF+SL DGFMLLLVMKP+K  
Sbjct: 187 RSKALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFISLADGFMLLLVMKPLKTI 246

Query: 253 LNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIG 312
           + + K ES  T+PIW+L MDPYIAVC+GAL+M+NVALAFLEPTISLW+EDNLTTDNWKIG
Sbjct: 247 IKEAKAESPDTIPIWRLLMDPYIAVCAGALMMSNVALAFLEPTISLWMEDNLTTDNWKIG 306

Query: 313 MIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPIC 372
           MIWLPAFFPHV GVV+TVK+AK YP +QW M A GL  EG+CCFIIPFS SY+MLMLPIC
Sbjct: 307 MIWLPAFFPHVIGVVVTVKMAKKYPQWQWAMAAGGLAFEGMCCFIIPFSGSYKMLMLPIC 366

Query: 373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF 432
           GICFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+AIGF
Sbjct: 367 GICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGF 426

Query: 433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAND 492
           TALNFLIAF N+LYAPVL+Y+KNIYDFKPF+NEANILM+DPP KEYQTY+MQD++P+  +
Sbjct: 427 TALNFLIAFSNLLYAPVLMYIKNIYDFKPFQNEANILMSDPPAKEYQTYSMQDQKPLDQN 486

Query: 493 YKNHLEYS-MQETS 505
           YKNHL+Y  MQ+T 
Sbjct: 487 YKNHLDYGRMQDTE 500

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345494254|ref|XP_001605173.2| PREDICTED: vesicular acetylcholine transporter-like [Nasonia vitripennis]

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/501 (77%), Positives = 444/501 (88%), Gaps = 10/501 (1%)

Query: 10  VVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDY 69
            + ++K+PVLNLEV EVK+IVW KLQEP +QR+LILVIV  ALLLDNMLYMVIVPIIPDY
Sbjct: 87  TMSSIKIPVLNLEVGEVKEIVWTKLQEPVAQRRLILVIVCIALLLDNMLYMVIVPIIPDY 146

Query: 70  LRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALI 129
           L++IGA+ +E    +L  +      HH     G+DSATGVLFASKAIVQLMVNPFSGALI
Sbjct: 147 LKYIGAFADE----SLPPNTTAAPGHH-----GQDSATGVLFASKAIVQLMVNPFSGALI 197

Query: 130 DRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 189
           DRIGYD+PMMIGL IMFLSTA+FACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE
Sbjct: 198 DRIGYDIPMMIGLTIMFLSTAVFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 257

Query: 190 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV 249
           ENERS+ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAFVSL DG MLLLVMKP 
Sbjct: 258 ENERSKALGIALAFISFGCLVAPPFGGALYQFAGKEMPFLILAFVSLADGLMLLLVMKPF 317

Query: 250 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW 309
           KEQL + + ES  T+PIW+LF+DPYIAVC+GAL+M+NVALAFLEPT+SLW+EDN+T DNW
Sbjct: 318 KEQLKESRKESGPTIPIWRLFIDPYIAVCAGALMMSNVALAFLEPTLSLWMEDNITHDNW 377

Query: 310 KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLML 369
           K+GM+WLPAFFPHVFGV ITVK+AK YP +QWLM A GL LEG CCFIIPFSTSY  LM+
Sbjct: 378 KMGMVWLPAFFPHVFGVAITVKMAKKYPQHQWLMAAGGLALEGFCCFIIPFSTSYTFLMI 437

Query: 370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA 429
           PICGICFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI+AGG+V+A
Sbjct: 438 PICGICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIIAGGVVEA 497

Query: 430 IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPV 489
           IGFTALNF IAF N+LYAPVL+YL++IYDFKPF++EANILM DPP KEYQTY +Q+++PV
Sbjct: 498 IGFTALNFGIAFSNLLYAPVLMYLRHIYDFKPFQDEANILMQDPPDKEYQTYVLQEQRPV 557

Query: 490 ANDYKNHLEYSMQ-ETSIDEN 509
           + +  NHL    + ET++D++
Sbjct: 558 SGEVGNHLTSQTRMETNVDQD 578

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347967725|ref|XP_312587.5| AGAP002369-PA [Anopheles gambiae str. PEST] gi|333468329|gb|EAA07682.6| AGAP002369-PA [Anopheles gambiae str. PEST]

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/508 (76%), Positives = 439/508 (86%), Gaps = 4/508 (0%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +P++NLE +EVK+I W K++EP+SQRKLILVIVS ALLLDNMLYMVIVPIIPDYLR+IG 
Sbjct: 4   LPIINLEPSEVKEIFWTKVKEPQSQRKLILVIVSIALLLDNMLYMVIVPIIPDYLRYIGT 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           WG E+       +   T PH   H  G+DSATG+LFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  WGPEEPYNMSAPTTVFT-PHTHSH-HGQDSATGILFASKAIVQLMVNPFSGALIDRIGYD 121

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           LPMM+GL IMFLST +FACGRSY +LFFARSLQGVGSAFADTSGLAMIADRFTEE ER++
Sbjct: 122 LPMMVGLIIMFLSTMVFACGRSYSMLFFARSLQGVGSAFADTSGLAMIADRFTEEAERTK 181

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PF+ILA +SL+DGFMLLLVMKP+KEQL  
Sbjct: 182 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFVILALISLIDGFMLLLVMKPIKEQLAD 241

Query: 256 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW 315
           ++     +VPIW+L MDPYIAVC+GAL+M+NVALAFLEPTISLW+EDNLTTDNWKIGM+W
Sbjct: 242 RQEVRAPSVPIWRLLMDPYIAVCAGALMMSNVALAFLEPTISLWMEDNLTTDNWKIGMVW 301

Query: 316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC 375
           LPAFFPHVFGV+ITVK+A  YP  QWLM A GL LEGLCCFIIPFS+SY MLM+PICGIC
Sbjct: 302 LPAFFPHVFGVIITVKMAAQYPDKQWLMAAGGLALEGLCCFIIPFSSSYIMLMIPICGIC 361

Query: 376 FGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
           FG+AL+DTALLPTLGYLVD+RYVSVYGSIYAIADISYSLAYA+GPI+AGG+V+AIGFTAL
Sbjct: 362 FGIALIDTALLPTLGYLVDIRYVSVYGSIYAIADISYSLAYAVGPIIAGGVVEAIGFTAL 421

Query: 436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN 495
           NFLIAF N+LYAPV+ YL+NIYDFK FENEAN+LM DPP KEYQTYTM D+Q V  +YKN
Sbjct: 422 NFLIAFSNLLYAPVMYYLRNIYDFKHFENEANVLMGDPPTKEYQTYTMHDQQMVGEEYKN 481

Query: 496 HLEYSMQETSIDENKQPAANVGTNGVSN 523
           HLEY  Q    D N Q   N+      N
Sbjct: 482 HLEYGRQTD--DGNYQQETNIDQGYSQN 507

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157126210|ref|XP_001660850.1| vesamicol binding protein, putative [Aedes aegypti] gi|108873321|gb|EAT37546.1| AAEL010462-PA [Aedes aegypti]

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/501 (76%), Positives = 436/501 (87%), Gaps = 2/501 (0%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +P++NLE +EVK+I W K+QEP SQRKLILVIVS ALLLDNMLYMVIVPIIPDYLR+IG 
Sbjct: 4   LPIINLEPSEVKEIFWTKVQEPTSQRKLILVIVSIALLLDNMLYMVIVPIIPDYLRYIGT 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           WG E+ +     +   T PH   H  G+DSATGVLFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  WGPEEPMNTSAPTTVFT-PHAHAH-NGQDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 121

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           LPMM+GL IMFLST +FACGRSY +LFFARSLQGVGSAFADTSGLAMIADRFTEE ERS+
Sbjct: 122 LPMMVGLLIMFLSTMVFACGRSYSMLFFARSLQGVGSAFADTSGLAMIADRFTEEAERSK 181

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PF+ILA +SL+DGFMLLLVMKP+KE L +
Sbjct: 182 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFVILALISLMDGFMLLLVMKPIKEILAE 241

Query: 256 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW 315
           ++     T+PIW+L +DPYIAVC+GAL M+NVALAFLEPTISLW+ED LT DNWKIGM+W
Sbjct: 242 RQEVKQDTIPIWRLLIDPYIAVCAGALTMSNVALAFLEPTISLWMEDTLTNDNWKIGMVW 301

Query: 316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC 375
           LPAFFPHVFGVVITVK+A+ YP  QW+M A GL LEGLCCF+IPFS+SY MLM+PICGIC
Sbjct: 302 LPAFFPHVFGVVITVKMARKYPEKQWIMAAGGLALEGLCCFMIPFSSSYIMLMIPICGIC 361

Query: 376 FGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
           FG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+AIGFTAL
Sbjct: 362 FGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTAL 421

Query: 436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN 495
           NF IAF N+LYAPVL YL+NIYDFK FENEAN+LM DPP KEYQTYTMQD+Q V  +YKN
Sbjct: 422 NFGIAFSNLLYAPVLGYLRNIYDFKHFENEANVLMGDPPTKEYQTYTMQDQQAVGTEYKN 481

Query: 496 HLEYSMQETSIDENKQPAANV 516
           HLEY  Q+      +Q   N+
Sbjct: 482 HLEYGRQQDDSGYQQQQETNI 502

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328782367|ref|XP_001120960.2| PREDICTED: vesicular acetylcholine transporter-like [Apis mellifera]

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/532 (72%), Positives = 456/532 (85%), Gaps = 14/532 (2%)

Query: 12  GTLK-VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL 70
           GT+  +P+LN+E++E+K+IVW KLQEPK+QRKL+L+IVS ALLLDNMLYMVIVPIIPDYL
Sbjct: 106 GTMTTIPILNIELSELKEIVWAKLQEPKAQRKLVLIIVSIALLLDNMLYMVIVPIIPDYL 165

Query: 71  RFIGAWG---EEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA 127
           +++GA+G   EED++ A       T  HH     G+DSATGVLFASKAIVQLMVNPFSGA
Sbjct: 166 KYVGAFGDVEEEDEVNATG-----TPSHH-----GQDSATGVLFASKAIVQLMVNPFSGA 215

Query: 128 LIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRF 187
           LIDRIGYD+PMMIGLCIMFLSTA+FACGRSYGVLFFARSLQGVGSAFADTSGLAMIADR+
Sbjct: 216 LIDRIGYDIPMMIGLCIMFLSTAVFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRY 275

Query: 188 TEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK 247
           TEE ERS+ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAF+SL DG MLLLVMK
Sbjct: 276 TEEAERSKALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFISLADGVMLLLVMK 335

Query: 248 PVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTD 307
           PVKEQ+ Q++ E   T+PIW+L MDPYIAVC+GAL+M+NVALAFLEPTISLW+EDN+T D
Sbjct: 336 PVKEQVKQRQGEMRQTIPIWRLLMDPYIAVCAGALMMSNVALAFLEPTISLWMEDNITRD 395

Query: 308 NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML 367
           NWK+GMIWLPAFFPHVFGV+ITVK+AK YP  QWLM A GL LEG+CCFIIPF +SY  L
Sbjct: 396 NWKMGMIWLPAFFPHVFGVMITVKMAKQYPQQQWLMAASGLALEGMCCFIIPFCSSYGAL 455

Query: 368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV 427
           M+P+CGICFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V
Sbjct: 456 MIPLCGICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSVAYAVGPIIAGGVV 515

Query: 428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQ 487
           +AIGFTALN  IAF N+LYAPVL+YL++IYDFKPF++EA++LM +PP KEYQTY +Q+++
Sbjct: 516 EAIGFTALNIGIAFSNLLYAPVLMYLRHIYDFKPFQDEADVLMQNPPDKEYQTYVLQEQR 575

Query: 488 PVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPP 539
           P++ +  NHL  +  ET++D+ +   A    +   N   A     G  + PP
Sbjct: 576 PLSGEVGNHLNQARMETNVDQEQNYQAGQNYDYGQNINAAGYTQPGYEQQPP 627

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322792819|gb|EFZ16652.1| hypothetical protein SINV_05992 [Solenopsis invicta]

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/529 (73%), Positives = 455/529 (86%), Gaps = 12/529 (2%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +P+LN+E  E+K+IVW KLQEPK+QRKLILVIVS ALLLDNMLYMVIVPIIPDYL+++GA
Sbjct: 4   IPILNMEFGELKEIVWTKLQEPKAQRKLILVIVSVALLLDNMLYMVIVPIIPDYLKYVGA 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           +G ++++  +N +     P H     G+DSATGVLFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  FGTDEEVVMVNTT---GPPGH----HGQDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 116

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           +PMMIGLCIMFLST++FACG+SY VLFFARSLQGVGSAFADT+GLAMIADRFTEE+ERS+
Sbjct: 117 IPMMIGLCIMFLSTSVFACGKSYSVLFFARSLQGVGSAFADTAGLAMIADRFTEESERSK 176

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAFVSL DGFMLLLVMKP+KEQL  
Sbjct: 177 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFVSLADGFMLLLVMKPIKEQLRD 236

Query: 256 KK-PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMI 314
           +   E+ ST+PIW+L MDPYIAVC+GAL+M+NVALAFLEPTISLW+ED +T DNWKIGMI
Sbjct: 237 RNMHETKSTIPIWRLLMDPYIAVCAGALMMSNVALAFLEPTISLWMEDTMTHDNWKIGMI 296

Query: 315 WLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGI 374
           WLPAFFPHV GVVITVK+AK YP YQWLM A GL LEGLCCFIIPF +SYQ+LM+P+CGI
Sbjct: 297 WLPAFFPHVVGVVITVKMAKQYPQYQWLMAAGGLALEGLCCFIIPFCSSYQVLMIPLCGI 356

Query: 375 CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTA 434
           CFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+AIGFTA
Sbjct: 357 CFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSVAYAVGPIIAGGVVEAIGFTA 416

Query: 435 LNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYK 494
           LN  IAF N+LYAPVL YL++IYDFKPF++EANILM DPP KEYQTY +Q+++P+  +  
Sbjct: 417 LNVGIAFSNLLYAPVLYYLRHIYDFKPFQDEANILMQDPPDKEYQTYVLQEQRPITGEIG 476

Query: 495 NHLEYSMQETSI----DENKQPAANVGTNGVSNPFKASAPSTGPPETPP 539
           NHL  +  ET+I    D++ Q A  V  +  ++ + A + +    E  P
Sbjct: 477 NHLNQTRMETNIDQGYDQSYQTAGQVSYDQRADGYGAQSYNQPAHEQQP 525

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332028561|gb|EGI68598.1| Vesicular acetylcholine transporter [Acromyrmex echinatior]

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/509 (75%), Positives = 448/509 (88%), Gaps = 12/509 (2%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +P+LN+E +E+K+IVW KLQEPKSQRKLILVIVS ALLLDNMLYMVIVPIIPDYL+++GA
Sbjct: 4   IPILNMEFSELKEIVWTKLQEPKSQRKLILVIVSIALLLDNMLYMVIVPIIPDYLKYVGA 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           +GE ++   +N S   + P       G+DSATGVLFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  FGEIEE-PPVNASGPVSHP-------GQDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 115

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           +PMMIGL IMFLST++FACG+SYGVLFFARSLQGVGSAFADT+GLAMIADRFTEE+ERS+
Sbjct: 116 IPMMIGLSIMFLSTSVFACGKSYGVLFFARSLQGVGSAFADTAGLAMIADRFTEESERSK 175

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILAFVSL DGFMLLLVMKP+KEQL +
Sbjct: 176 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILAFVSLADGFMLLLVMKPIKEQLQE 235

Query: 256 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW 315
           +  E  ST+PIW+L MDPYIAVC+GAL+M+NVALAFLEPTISLW+ED +T DNWKIGMIW
Sbjct: 236 RHHEPKSTIPIWRLLMDPYIAVCAGALMMSNVALAFLEPTISLWMEDTMTHDNWKIGMIW 295

Query: 316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC 375
           LPAFFPHV GVVITV++AK YP YQWLM A GL LEGLCCFIIPF +SY++LM+P+CGIC
Sbjct: 296 LPAFFPHVIGVVITVRMAKQYPQYQWLMAAGGLALEGLCCFIIPFCSSYKVLMIPLCGIC 355

Query: 376 FGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
           FG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+AIGFTAL
Sbjct: 356 FGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSVAYAVGPIIAGGVVEAIGFTAL 415

Query: 436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN 495
           N  IAF N+LYAPVL YL++IYDFKPF++EAN+LM DPP KEYQTY +Q+++P+  +  N
Sbjct: 416 NVGIAFSNLLYAPVLYYLRHIYDFKPFQDEANVLMQDPPDKEYQTYVLQEQRPITGEIGN 475

Query: 496 HLEYSMQETSI----DENKQPAANVGTNG 520
           HL  +  ET+I    D+N Q    VG +G
Sbjct: 476 HLNQTRMETNIDQGYDQNYQTTGQVGYDG 504

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170030542|ref|XP_001843147.1| vesamicol binding protein [Culex quinquefasciatus] gi|167867823|gb|EDS31206.1| vesamicol binding protein [Culex quinquefasciatus]

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/506 (76%), Positives = 440/506 (86%), Gaps = 14/506 (2%)

Query: 16  VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
           +PV+NLE +EVK+I W K++EP SQR+LILVIVS ALLLDNMLYMVIVPIIPDYLR+IG 
Sbjct: 4   LPVINLEPSEVKEIFWTKVKEPGSQRRLILVIVSIALLLDNMLYMVIVPIIPDYLRYIGT 63

Query: 76  WGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD 135
           WG E+ + A   +   T PH   H  G+D+ATGVLFASKAIVQLMVNPFSGALIDRIGYD
Sbjct: 64  WGPEEPVNASAPTTVWT-PHAHAH-HGQDTATGVLFASKAIVQLMVNPFSGALIDRIGYD 121

Query: 136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ 195
           LPMM+GL IMFLST +FACGRSY +LFFARSLQGVGSAFADTSGLAMIADRFTEENERS+
Sbjct: 122 LPMMVGLIIMFLSTMVFACGRSYSMLFFARSLQGVGSAFADTSGLAMIADRFTEENERSK 181

Query: 196 ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ 255
           ALGIALAFISFGCLVAPPFGGALYQFAGKE+PF+ILA VSLLDGFMLLLVMKP+KE +  
Sbjct: 182 ALGIALAFISFGCLVAPPFGGALYQFAGKEVPFIILALVSLLDGFMLLLVMKPIKEIMAD 241

Query: 256 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW 315
           ++     TVPIW+L +DPYIAVC+GAL M+NVALAFLEPTISLW+EDNLT +NWKIGM+W
Sbjct: 242 RQELPQETVPIWRLLIDPYIAVCAGALTMSNVALAFLEPTISLWMEDNLTAENWKIGMVW 301

Query: 316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC 375
           LPAFFPHV GVVITVKLA++YP  QWLM A GL LEGLCCFIIPFS+SY +LM+PICGIC
Sbjct: 302 LPAFFPHVLGVVITVKLARIYPEKQWLMAAGGLALEGLCCFIIPFSSSYIVLMIPICGIC 361

Query: 376 FGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
           FG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+AIGFTAL
Sbjct: 362 FGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEAIGFTAL 421

Query: 436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN 495
           NF+IAF N+ YAPVL+YL+NIYDFK FENEANILM +PP KEYQTYTMQD+Q V  +YKN
Sbjct: 422 NFMIAFANLFYAPVLMYLRNIYDFKHFENEANILMGEPPTKEYQTYTMQDQQAVGTEYKN 481

Query: 496 HLEYS------------MQETSIDEN 509
           HLEY              QET+ID+ 
Sbjct: 482 HLEYGRPQDDQGYQQHQQQETNIDQG 507

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	871
FB|FBgn0015323	578	VAChT "VAChT" [Drosophila mela	0.572	0.863	0.754	3.3e-208
WB|WBGene00006756	532	unc-17 [Caenorhabditis elegans	0.508	0.832	0.574	6e-135
UNIPROTKB|P34711	532	unc-17 "Vesicular acetylcholin	0.508	0.832	0.574	6e-135
ZFIN|ZDB-GENE-060929-990	513	slc18a3a "solute carrier famil	0.544	0.923	0.536	8.8e-134
ZFIN|ZDB-GENE-040426-1410	493	slc18a3b "solute carrier famil	0.436	0.770	0.579	1.2e-132
UNIPROTKB|Q16572	532	SLC18A3 "Vesicular acetylcholi	0.450	0.736	0.565	4.2e-130
UNIPROTKB|E2QRS8	517	SLC18A3 "Uncharacterized prote	0.523	0.882	0.543	1.6e-127
UNIPROTKB|F6V4W8	516	SLC18A3 "Uncharacterized prote	0.523	0.883	0.543	1.6e-127
UNIPROTKB|E1BK36	524	SLC18A3 "Uncharacterized prote	0.453	0.753	0.548	3.4e-126
UNIPROTKB|F1NJI5	428	SLC18A3 "Uncharacterized prote	0.455	0.927	0.549	5.4e-118

FB|FBgn0015323 VAChT "VAChT" [Drosophila melanogaster (taxid:7227)]

 Score = 1986 (704.2 bits), Expect = 3.3e-208, Sum P(2) = 3.3e-208
 Identities = 382/506 (75%), Positives = 430/506 (84%)

Query:    11 VGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL 70
             + + ++PV+NLEV EVKDIVWEK+QEP +QR+LILVIVS ALLLDNMLYMVIVPIIPDYL
Sbjct:     1 MASFQIPVINLEVREVKDIVWEKIQEPVNQRRLILVIVSIALLLDNMLYMVIVPIIPDYL 60

Query:    71 RFIGAWGEEDQLQALNES-RYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALI 129
             R IG++ +      L ++      P H +H  G+DSATG+LFASKAIVQLMVNPFSG LI
Sbjct:    61 REIGSFDDGPTPPPLRDNITGKIIPVHHDH-HGQDSATGILFASKAIVQLMVNPFSGGLI 119

Query:   130 DRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 189
             D+IGYDLPMMIGL IMF STA+FACG SY VLFFARSLQG GSAFADT+GLAMIADRFTE
Sbjct:   120 DKIGYDLPMMIGLTIMFFSTAVFACGSSYSVLFFARSLQGAGSAFADTAGLAMIADRFTE 179

Query:   190 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV 249
             ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKE+PFLILA V LLDG MLLLVMKPV
Sbjct:   180 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEVPFLILALVCLLDGLMLLLVMKPV 239

Query:   250 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW 309
             KE + Q K      +PIW+L MDPYIAVC+GAL M+NVALAFLEPTISLW+EDN+TTDNW
Sbjct:   240 KEAMKQSKDVQDQVIPIWRLLMDPYIAVCAGALTMSNVALAFLEPTISLWMEDNMTTDNW 299

Query:   310 KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLML 369
             KIGM+WLPAFFPHV GVVITVK+A+ YP +QWLM A GL LEG  CFIIPF + Y+MLML
Sbjct:   300 KIGMVWLPAFFPHVLGVVITVKMARKYPQHQWLMAAGGLALEGFSCFIIPFCSGYKMLML 359

Query:   370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA 429
             PIC ICFG+AL+DTALLPTLGYLVDVRYVSVYGSIYAIADISYS+AYA+GPI+AGG+V+A
Sbjct:   360 PICVICFGIALIDTALLPTLGYLVDVRYVSVYGSIYAIADISYSIAYAVGPIIAGGVVEA 419

Query:   430 IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPV 489
             IGFTALNFLIAF N+ Y PVL  L+NIYDFKPFENEANILM DPP KEYQTY M D++PV
Sbjct:   420 IGFTALNFLIAFSNLAYVPVLRKLRNIYDFKPFENEANILMQDPPNKEYQTYVMHDQKPV 479

Query:   490 ANDYKNHLEYSMQ-----ETSIDENK 510
                 KNHLEY  Q     ET++D+ +
Sbjct:   480 EGGVKNHLEYGQQYQQEQETNLDDQQ 505

GO:0005278 "acetylcholine:hydrogen antiporter activity" evidence=NAS

GO:0006836 "neurotransmitter transport" evidence=NAS

GO:0005277 "acetylcholine transmembrane transporter activity" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA;NAS

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015893 "drug transport" evidence=IEA

WB|WBGene00006756 unc-17 [Caenorhabditis elegans (taxid:6239)]

 Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
 Identities = 259/451 (57%), Positives = 331/451 (73%)

Query:    16 VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
             VPV+N +   +K    + L++  +Q+K +LVIVS ALLLDNMLYMVIVPIIP YLR I  
Sbjct:     5 VPVINRDSEILKADAKKWLEQQDNQKKCVLVIVSIALLLDNMLYMVIVPIIPKYLRDIHN 64

Query:    76 W-----GEEDQLQALNESRYHTKP-HHREHAEGEDSATGVLFASKAIVQLMVNPFSGALI 129
             +     G  ++   L    Y  +    R +   E+   G LFASKA++Q+ VNPFSG +I
Sbjct:    65 YQVTFEGYHNETSQLANGTYLVREVGGRINFLDEELELGWLFASKALLQIFVNPFSGYII 124

Query:   130 DRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 189
             DR+GY++PM++GLC MF STA+FA G+SYGVL FARSLQG GSAFADTSGLAMIADRFTE
Sbjct:   125 DRVGYEIPMILGLCTMFFSTAIFALGKSYGVLLFARSLQGFGSAFADTSGLAMIADRFTE 184

Query:   190 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV 249
             ENERS ALGIALAFISFGCLVAPPFG  LY  AGK +PFLIL+FV L D   + +V+ P 
Sbjct:   185 ENERSAALGIALAFISFGCLVAPPFGSVLYSLAGKPVPFLILSFVCLADAIAVFMVINPH 244

Query:   250 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLT-TDN 308
             +   +    +   T P+W+LFMDP+IA CSGAL+MANV+LAFLEPTI+ W+ + +  T  
Sbjct:   245 RRGTDSHGEKVQGT-PMWRLFMDPFIACCSGALIMANVSLAFLEPTITTWMSEMMPDTPG 303

Query:   309 WKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLM 368
             W +G+IWLP FFPHV GV +TVK+ + +P + W +  VGL +EG+ CF IP++TS   L+
Sbjct:   304 WLVGVIWLPPFFPHVLGVYVTVKMLRAFPHHTWAIAMVGLAMEGIACFAIPYTTSVMQLV 363

Query:   369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD 428
             +P+  +CFG+AL+DT+LLP LG+LVD R+VSVYGS+YAIADISYSLAYA GPI+AG IV 
Sbjct:   364 IPLSFVCFGIALIDTSLLPMLGHLVDTRHVSVYGSVYAIADISYSLAYAFGPIIAGWIVT 423

Query:   429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDF 459
               GFTALN +I   N+ YAPVL  L+ ++ +
Sbjct:   424 NWGFTALNIIIFATNVTYAPVLFLLRKVHSY 454

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015893 "drug transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0015870 "acetylcholine transport" evidence=ISS

GO:0040012 "regulation of locomotion" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0043051 "regulation of pharyngeal pumping" evidence=IGI;IMP

GO:0046928 "regulation of neurotransmitter secretion" evidence=IMP

GO:0043005 "neuron projection" evidence=IDA

GO:0045202 "synapse" evidence=IDA

GO:0030285 "integral to synaptic vesicle membrane" evidence=NAS

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0005277 "acetylcholine transmembrane transporter activity" evidence=ISS

GO:0007271 "synaptic transmission, cholinergic" evidence=IMP

UNIPROTKB|P34711 unc-17 "Vesicular acetylcholine transporter unc-17" [Caenorhabditis elegans (taxid:6239)]

 Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
 Identities = 259/451 (57%), Positives = 331/451 (73%)

Query:    16 VPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGA 75
             VPV+N +   +K    + L++  +Q+K +LVIVS ALLLDNMLYMVIVPIIP YLR I  
Sbjct:     5 VPVINRDSEILKADAKKWLEQQDNQKKCVLVIVSIALLLDNMLYMVIVPIIPKYLRDIHN 64

Query:    76 W-----GEEDQLQALNESRYHTKP-HHREHAEGEDSATGVLFASKAIVQLMVNPFSGALI 129
             +     G  ++   L    Y  +    R +   E+   G LFASKA++Q+ VNPFSG +I
Sbjct:    65 YQVTFEGYHNETSQLANGTYLVREVGGRINFLDEELELGWLFASKALLQIFVNPFSGYII 124

Query:   130 DRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE 189
             DR+GY++PM++GLC MF STA+FA G+SYGVL FARSLQG GSAFADTSGLAMIADRFTE
Sbjct:   125 DRVGYEIPMILGLCTMFFSTAIFALGKSYGVLLFARSLQGFGSAFADTSGLAMIADRFTE 184

Query:   190 ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV 249
             ENERS ALGIALAFISFGCLVAPPFG  LY  AGK +PFLIL+FV L D   + +V+ P 
Sbjct:   185 ENERSAALGIALAFISFGCLVAPPFGSVLYSLAGKPVPFLILSFVCLADAIAVFMVINPH 244

Query:   250 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLT-TDN 308
             +   +    +   T P+W+LFMDP+IA CSGAL+MANV+LAFLEPTI+ W+ + +  T  
Sbjct:   245 RRGTDSHGEKVQGT-PMWRLFMDPFIACCSGALIMANVSLAFLEPTITTWMSEMMPDTPG 303

Query:   309 WKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLM 368
             W +G+IWLP FFPHV GV +TVK+ + +P + W +  VGL +EG+ CF IP++TS   L+
Sbjct:   304 WLVGVIWLPPFFPHVLGVYVTVKMLRAFPHHTWAIAMVGLAMEGIACFAIPYTTSVMQLV 363

Query:   369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD 428
             +P+  +CFG+AL+DT+LLP LG+LVD R+VSVYGS+YAIADISYSLAYA GPI+AG IV 
Sbjct:   364 IPLSFVCFGIALIDTSLLPMLGHLVDTRHVSVYGSVYAIADISYSLAYAFGPIIAGWIVT 423

Query:   429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDF 459
               GFTALN +I   N+ YAPVL  L+ ++ +
Sbjct:   424 NWGFTALNIIIFATNVTYAPVLFLLRKVHSY 454

GO:0005887 "integral to plasma membrane" evidence=NAS

GO:0015870 "acetylcholine transport" evidence=NAS

GO:0005277 "acetylcholine transmembrane transporter activity" evidence=IMP

GO:0006937 "regulation of muscle contraction" evidence=IMP

ZFIN|ZDB-GENE-060929-990 slc18a3a "solute carrier family 18 (vesicular acetylcholine), member 3a" [Danio rerio (taxid:7955)]

 Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
 Identities = 262/488 (53%), Positives = 341/488 (69%)

Query:    22 EVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQ 81
             E+ E    +   +Q+P+ QR++ILVIV  ALLLDNMLYMVIVPI+PDYL  + +  E+  
Sbjct:    19 EMGERTKQLGNAIQDPERQRRIILVIVCVALLLDNMLYMVIVPIVPDYLAHLESESEQAH 78

Query:    82 LQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIG 141
             ++  N S   T+       E  D   GVLFASKAI+QL+VNP +G  IDR+GYD+P++IG
Sbjct:    79 VKG-NSSINITQN------ENFDLQIGVLFASKAILQLLVNPLTGTFIDRVGYDIPLLIG 131

Query:   142 LCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL 201
             L IMF+ST +FA   +Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE+ERS+ALGIAL
Sbjct:   132 LSIMFVSTCIFAFAENYATLFMARSLQGLGSAFADTSGIAMIADKYAEESERSRALGIAL 191

Query:   202 AFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH 261
             AFISFG L APPFGG LY+FAGK  PF+ LA V L DG + L V+KP   +  +  P   
Sbjct:   192 AFISFGSLAAPPFGGVLYEFAGKRFPFIALACVCLADGILCLTVLKPFSSRTRENMPVG- 250

Query:   262 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFP 321
                PI+KL +DPYIAV +GAL   N+ LAFLEPTI+ W+E+ +    W+IG+ WLPAFFP
Sbjct:   251 --TPIYKLMIDPYIAVVAGALTTCNIPLAFLEPTIANWMEETMNASQWQIGITWLPAFFP 308

Query:   322 HVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALV 381
             H+ GV +TVKLA  YP  QW   A+G+V+ G    I+P   +++ L++P+CG+CFG+ALV
Sbjct:   309 HILGVYLTVKLAAKYPHLQWFYGALGMVIIGASSCIVPACKNFEQLIIPLCGVCFGIALV 368

Query:   382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF 441
             DTALLPTL +LVDVR+VSVYGS+YAIADISY +AYA+GPIVAG IV  +GF  LN  +  
Sbjct:   369 DTALLPTLAFLVDVRHVSVYGSVYAIADISYCVAYALGPIVAGKIVHDLGFVQLNLGMGL 428

Query:   442 MNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSM 501
              N+LYAP L+ L+N+   KP  +E N+L+ +     Y T  M++RQ   + Y +    S 
Sbjct:   429 ANVLYAPALLLLRNVSLMKPSHSERNMLLEEGATGLYDTIRMEERQRKKHGYSS----SG 484

Query:   502 QETSIDEN 509
                 IDEN
Sbjct:   485 NCVPIDEN 492

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015893 "drug transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0006836 "neurotransmitter transport" evidence=IEA

ZFIN|ZDB-GENE-040426-1410 slc18a3b "solute carrier family 18 (vesicular acetylcholine), member 3b" [Danio rerio (taxid:7955)]

 Score = 1176 (419.0 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
 Identities = 222/383 (57%), Positives = 287/383 (74%)

Query:   104 DSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFF 163
             D   GVLFASKA++QL+VNP SG  IDR+GYDLP++IGL +MFLST +FA   +YG LF 
Sbjct:    82 DIQIGVLFASKALLQLLVNPLSGTFIDRVGYDLPLLIGLLVMFLSTCIFAFAENYGTLFA 141

Query:   164 ARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAG 223
             ARSLQG+GSAFADTSG+AMIAD+FTEE ERS+ALGIALAFISFG LVAPPFGG LY+FAG
Sbjct:   142 ARSLQGLGSAFADTSGIAMIADKFTEEAERSRALGIALAFISFGSLVAPPFGGILYEFAG 201

Query:   224 KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL 283
             K +PF++LA V L DG +LL V+KP  ++  +  P      PI +L +DPYIAV +GAL 
Sbjct:   202 KRVPFIVLACVCLADGVLLLTVVKPFSDRTRENMPVG---TPIHRLMVDPYIAVVAGALT 258

Query:   284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLM 343
             + N+ LAFLEPTI+ W+E  +    W++G++WLPAF PHV GV ITV+LA  YP  QW  
Sbjct:   259 VCNIPLAFLEPTIANWMESTMDASKWQMGLVWLPAFLPHVLGVYITVRLAARYPERQWFY 318

Query:   344 VAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGS 403
              A+G+V+ G     +P   ++  L+ P+CGICFG+ALVDTALLPTL +LVDVR+VSVYGS
Sbjct:   319 GALGMVIIGASSCTVPACKTFGELVFPLCGICFGIALVDTALLPTLAFLVDVRHVSVYGS 378

Query:   404 IYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFE 463
             +YAIADISYS+AYA+GP+VAG IV  +GF  LN  +  +N+LYAP L+ L+ +   KP  
Sbjct:   379 VYAIADISYSVAYAMGPVVAGQIVHNLGFVQLNLGMGLVNVLYAPALLLLRPVCQIKPSF 438

Query:   464 NEANILMADPPKKEYQTYTMQDR 486
             +E N+L+ + P   Y +  +++R
Sbjct:   439 SERNVLLEEGPSGLYDSIRLEER 461

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015238 "drug transmembrane transporter activity" evidence=IEA

GO:0015893 "drug transport" evidence=IEA

GO:0006836 "neurotransmitter transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q16572 SLC18A3 "Vesicular acetylcholine transporter" [Homo sapiens (taxid:9606)]

 Score = 1135 (404.6 bits), Expect = 4.2e-130, Sum P(2) = 4.2e-130
 Identities = 223/394 (56%), Positives = 285/394 (72%)

Query:    97 REHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR 156
             R   E ED   GVLFASKAI+QL+VNP SG  IDR+ YD+P++IGL +MF ST LFA   
Sbjct:   114 RYPTESEDVKIGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGLGVMFASTVLFAFAE 173

Query:   157 SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGG 216
              Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE ERS+ALG+ALAFISFG LVAPPFGG
Sbjct:   174 DYATLFAARSLQGLGSAFADTSGIAMIADKYPEEPERSRALGVALAFISFGSLVAPPFGG 233

Query:   217 ALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIA 276
              LY+FAGK +PFL+LA VSL D  +LL V KP       +      T PI +L +DPYIA
Sbjct:   234 ILYEFAGKRVPFLVLAAVSLFDALLLLAVAKPFSAAARARANLPVGT-PIHRLMLDPYIA 292

Query:   277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY 336
             V +GAL   N+ LAFLEPTI+ W++  +    W++GM WLPAF PHV GV +TV+LA  Y
Sbjct:   293 VVAGALTTCNIPLAFLEPTIATWMKHTMAASEWEMGMAWLPAFVPHVLGVYLTVRLAARY 352

Query:   337 PTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR 396
             P  QWL  A+GL + G    I+P   S+  L++ +CG+CFG+ALVDTALLPTL +LVDVR
Sbjct:   353 PHLQWLYGALGLAVIGASSCIVPACRSFAPLVVSLCGLCFGIALVDTALLPTLAFLVDVR 412

Query:   397 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI 456
             +VSVYGS+YAIADISYS+AYA+GPIVAG IV ++GF  L+  +   N+LYAPVL+ L+N+
Sbjct:   413 HVSVYGSVYAIADISYSVAYALGPIVAGHIVHSLGFEQLSLGMGLANLLYAPVLLLLRNV 472

Query:   457 YDFKPFENEANILMADPPKKEYQTYTMQDRQPVA 490
                    +E ++L+ +PP+  Y    +++R PV+
Sbjct:   473 GLLTRSRSERDVLLDEPPQGLYDAVRLRER-PVS 505

GO:0005277 "acetylcholine transmembrane transporter activity" evidence=TAS

GO:0016020 "membrane" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0015870 "acetylcholine transport" evidence=TAS

GO:0005886 "plasma membrane" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0007269 "neurotransmitter secretion" evidence=TAS

GO:0060201 "clathrin-sculpted acetylcholine transport vesicle membrane" evidence=TAS

UNIPROTKB|E2QRS8 SLC18A3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
 Identities = 255/469 (54%), Positives = 329/469 (70%)

Query:    34 LQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL------RFIGAWGEEDQLQ---- 83
             LQ+P+  R+L+LVIV  AL LDNMLYMVIVPI+PDY+      R      E   LQ    
Sbjct:    25 LQDPRRHRRLVLVIVCVALFLDNMLYMVIVPIVPDYIAGMQKARRPTPGTEVSTLQLSTP 84

Query:    84 -ALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGL 142
              +++ +R +T        E ED   GVLFASKAI+QL+VNP SG  IDR+ YD+P++IGL
Sbjct:    85 ASVSANRGNTSESPTAATENEDVKIGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGL 144

Query:   143 CIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA 202
              ++F ST LFA    Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE ERS+ALG+ALA
Sbjct:   145 GVLFASTLLFAFAEDYATLFAARSLQGLGSAFADTSGIAMIADKYPEEPERSRALGVALA 204

Query:   203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS 262
             FISFG LVAPPFGG LYQFAGK  PFL+LA VSLLD  +LL+V KP       +      
Sbjct:   205 FISFGSLVAPPFGGFLYQFAGKHTPFLVLAAVSLLDALLLLVVAKPFSAATRARANLPVG 264

Query:   263 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPH 322
             T PI +L +DPYIAV +GAL   N+ LAFLEPTI+ W+E  +    W+ GM WLPAF PH
Sbjct:   265 T-PIHRLMLDPYIAVVAGALTTCNIPLAFLEPTIATWMEHTMAASEWETGMAWLPAFVPH 323

Query:   323 VFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVD 382
             V GV +TV+LA  YP  QWL  A+GL + G    ++P   S+  L++ +CG+CFG+ALVD
Sbjct:   324 VLGVYLTVRLAARYPHLQWLYGALGLAVIGASSCVVPACRSFAPLVVSLCGLCFGIALVD 383

Query:   383 TALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFM 442
             TALLPTL +LVDVR+VSVYGS+YAIADISYS+AYA+GPIVAG IV ++GF  L+  +   
Sbjct:   384 TALLPTLAFLVDVRHVSVYGSVYAIADISYSVAYALGPIVAGHIVHSLGFAQLSLGMGLA 443

Query:   443 NILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAN 491
             N+LYAPVL+ L+N+   +   +E ++L+ +PP+  Y    +++R PV++
Sbjct:   444 NLLYAPVLLLLRNVGLLRRSRSERDVLLEEPPQGLYDAVRLRER-PVSD 491

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F6V4W8 SLC18A3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1252 (445.8 bits), Expect = 1.6e-127, P = 1.6e-127
 Identities = 255/469 (54%), Positives = 329/469 (70%)

Query:    34 LQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYL------RFIGAWGEEDQLQ---- 83
             LQ+P+  R+L+LVIV  AL LDNMLYMVIVPI+PDY+      R      E   LQ    
Sbjct:    24 LQDPRRHRRLVLVIVCVALFLDNMLYMVIVPIVPDYIAGMQKARRPTPGTEVSTLQLSTP 83

Query:    84 -ALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGL 142
              +++ +R +T        E ED   GVLFASKAI+QL+VNP SG  IDR+ YD+P++IGL
Sbjct:    84 ASVSANRGNTSESPTAATENEDVKIGVLFASKAILQLLVNPLSGPFIDRMSYDVPLLIGL 143

Query:   143 CIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA 202
              ++F ST LFA    Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE ERS+ALG+ALA
Sbjct:   144 GVLFASTLLFAFAEDYATLFAARSLQGLGSAFADTSGIAMIADKYPEEPERSRALGVALA 203

Query:   203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS 262
             FISFG LVAPPFGG LYQFAGK  PFL+LA VSLLD  +LL+V KP       +      
Sbjct:   204 FISFGSLVAPPFGGFLYQFAGKHTPFLVLAAVSLLDALLLLVVAKPFSAATRARANLPVG 263

Query:   263 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPH 322
             T PI +L +DPYIAV +GAL   N+ LAFLEPTI+ W+E  +    W+ GM WLPAF PH
Sbjct:   264 T-PIHRLMLDPYIAVVAGALTTCNIPLAFLEPTIATWMEHTMAASEWETGMAWLPAFVPH 322

Query:   323 VFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVD 382
             V GV +TV+LA  YP  QWL  A+GL + G    ++P   S+  L++ +CG+CFG+ALVD
Sbjct:   323 VLGVYLTVRLAARYPHLQWLYGALGLAVIGASSCVVPACRSFAPLVVSLCGLCFGIALVD 382

Query:   383 TALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFM 442
             TALLPTL +LVDVR+VSVYGS+YAIADISYS+AYA+GPIVAG IV ++GF  L+  +   
Sbjct:   383 TALLPTLAFLVDVRHVSVYGSVYAIADISYSVAYALGPIVAGHIVHSLGFAQLSLGMGLA 442

Query:   443 NILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAN 491
             N+LYAPVL+ L+N+   +   +E ++L+ +PP+  Y    +++R PV++
Sbjct:   443 NLLYAPVLLLLRNVGLLRRSRSERDVLLEEPPQGLYDAVRLRER-PVSD 490

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BK36 SLC18A3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 1120 (399.3 bits), Expect = 3.4e-126, Sum P(2) = 3.4e-126
 Identities = 219/399 (54%), Positives = 286/399 (71%)

Query:    93 KPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALF 152
             KP H    + ED   GVLFASKAI+QL+VNP SG  IDR+ YDLP+++GL ++F ST +F
Sbjct:   104 KPQHPR--DNEDVKIGVLFASKAILQLLVNPLSGTFIDRMSYDLPLLLGLGVLFASTVMF 161

Query:   153 ACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAP 212
             A    Y  LF ARSLQG+GSAFADTSG+AMIAD++ EE ERS+ALG+ALAFISFG LVAP
Sbjct:   162 AFAEDYATLFAARSLQGLGSAFADTSGIAMIADKYPEEPERSRALGLALAFISFGSLVAP 221

Query:   213 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD 272
             PFGG L++FAGK  PFL+LA VSL D  +LL+V KP       +      T PI +L +D
Sbjct:   222 PFGGFLHEFAGKSAPFLVLAAVSLFDALLLLVVAKPFSAAARARANLPVGT-PIHRLMLD 280

Query:   273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL 332
             PYIAV +GAL   N+ LAFLEPTI+ W+E  +    W+ G+ WLPAF PHV GV +TV+L
Sbjct:   281 PYIAVVAGALTTCNIPLAFLEPTIATWMERTMAASEWEAGIAWLPAFVPHVLGVYLTVRL 340

Query:   333 AKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL 392
             A  YP  QWL  A GL + G    ++P   S+  L++ +CG+CFG+ALVDTALLPTL +L
Sbjct:   341 AARYPHLQWLYGAFGLAVIGASSCLVPACRSFAPLVISLCGLCFGIALVDTALLPTLAFL 400

Query:   393 VDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY 452
             VDVR+VSVYGS+YAIADISY +AYA+GPIVAG IV ++GF  L+  +   N+LYAPVL+ 
Sbjct:   401 VDVRHVSVYGSVYAIADISYCVAYALGPIVAGHIVHSLGFAQLSLGMGLANLLYAPVLLL 460

Query:   453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAN 491
             L+N+   K   +E ++L+ +PP+  Y    +++R P+++
Sbjct:   461 LRNVGLLKRSRSERDVLLDEPPQGLYDAVRLRER-PMSD 498

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1NJI5 SLC18A3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
 Identities = 221/402 (54%), Positives = 287/402 (71%)

Query:    93 KPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALF 152
             KP H    + ED   GVLF SKA++QL+VNP SG LIDR+GY+ P++ GL +MFLST  F
Sbjct:    31 KPRHTR--DSEDVQIGVLFTSKAMLQLLVNPLSGTLIDRVGYEAPLLAGLAVMFLSTTTF 88

Query:   153 ACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAP 212
             A   +Y  LF ARSLQG+GSAFADT+G+A+IADR+ EE  RS+ALG ALA ISFG L AP
Sbjct:    89 AFAGNYATLFAARSLQGLGSAFADTAGIALIADRYAEEPARSRALGTALACISFGSLAAP 148

Query:   213 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD 272
             PFGG LY+FAGK++PFL+LA V LLDG +LL +  P         P      PI +L +D
Sbjct:   149 PFGGVLYEFAGKQVPFLVLACVCLLDGLLLLALAPPCAAGARANMPVG---TPIHRLMID 205

Query:   273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL 332
             PYIAV +GAL   N+ LAFLEPTI+ W+++++    W++G+ WLPAFFPHV GV +TV+L
Sbjct:   206 PYIAVVAGALATCNIPLAFLEPTIANWMKESMGASEWEVGLTWLPAFFPHVLGVYVTVRL 265

Query:   333 AKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL 392
             A  YP  QW   A+G+ + G    ++P   ++  +++P+CGICFG+ALVDTALLPTL +L
Sbjct:   266 AAAYPHLQWFYGALGMAIIGASSCLVPACRNFWQVIIPLCGICFGIALVDTALLPTLAFL 325

Query:   393 VDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY 452
             VDVR+VSVYGS+YAIADISY +AYA+GP+VAG IV  +GF  LN  +   N+LYAPVLI+
Sbjct:   326 VDVRHVSVYGSVYAIADISYCVAYALGPVVAGQIVHTMGFVQLNLGMGLANVLYAPVLIF 385

Query:   453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYK 494
             LKN+   KP  +E NIL+ + PK  Y T  M+DR+ V    +
Sbjct:   386 LKNVCQMKPSHSERNILLEEGPKGLYDTIKMEDRRGVGKSLR 427

GO:0016021 "integral to membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P34711	UNC17_CAEEL	No assigned EC number	0.5244	0.5648	0.9248	yes	N/A
Q08C75	VACHA_DANRE	No assigned EC number	0.5242	0.5660	0.9610	yes	N/A
O35304	VACHT_MOUSE	No assigned EC number	0.5142	0.5292	0.8698	yes	N/A
Q62666	VACHT_RAT	No assigned EC number	0.5162	0.5292	0.8698	yes	N/A
O17444	VACHT_DROME	No assigned EC number	0.7704	0.5579	0.8408	yes	N/A
Q16572	VACHT_HUMAN	No assigned EC number	0.5232	0.5373	0.8796	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	871
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	1e-39
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	4e-36
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	1e-27
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	2e-13
COG2814	394	COG2814, AraJ, Arabinose efflux permease [Carbohyd	2e-10
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	9e-08
TIGR00893	399	TIGR00893, 2A0114, D-galactonate transporter	1e-06
PRK14995	495	PRK14995, PRK14995, methyl viologen resistance pro	1e-06
pfam13347	425	pfam13347, MFS_2, MFS/sugar transport protein	3e-06
COG0738	422	COG0738, FucP, Fucose permease [Carbohydrate trans	1e-05
TIGR00900	365	TIGR00900, 2A0121, H+ Antiporter protein	3e-05
PRK09874	408	PRK09874, PRK09874, drug efflux system protein Mdt	7e-05
COG0477	338	COG0477, ProP, Permeases of the major facilitator	1e-04
TIGR00710	385	TIGR00710, efflux_Bcr_CflA, drug resistance transp	1e-04
PRK11652	394	PRK11652, emrD, multidrug resistance protein D; Pr	2e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	3e-04
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	3e-04
pfam00083	449	pfam00083, Sugar_tr, Sugar (and other) transporter	4e-04
PRK15402	406	PRK15402, PRK15402, multidrug efflux system transl	4e-04
TIGR00880	141	TIGR00880, 2_A_01_02, Multidrug resistance protein	6e-04
cd06174	352	cd06174, MFS, The Major Facilitator Superfamily (M	0.001
pfam07690	346	pfam07690, MFS_1, Major Facilitator Superfamily	0.001
TIGR00891	405	TIGR00891, 2A0112, putative sialic acid transporte	0.002
TIGR00892	455	TIGR00892, 2A0113, monocarboxylate transporter 1	0.003
PRK05122	399	PRK05122, PRK05122, major facilitator superfamily	0.003
TIGR00883	394	TIGR00883, 2A0106, metabolite-proton symporter	0.003
TIGR00897	402	TIGR00897, 2A0118, polyol permease family	0.004

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score =  142 bits (361), Expect = 1e-39
 Identities = 63/141 (44%), Positives = 84/141 (59%), Gaps = 1/141 (0%)

Query: 108 GVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSL 167
           G+L A  A+ QL+ +P SG L DR G    +++GL I  LSTA+FA   +  VL  AR L
Sbjct: 1   GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFL 60

Query: 168 QGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIP 227
           QG G+AFA  +G A+IAD +  E ER  ALG+  A I+ G L+ PP GG L QF G   P
Sbjct: 61  QGFGAAFALVAGAALIADIYPPE-ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAP 119

Query: 228 FLILAFVSLLDGFMLLLVMKP 248
           FL LA ++L    +L  ++  
Sbjct: 120 FLFLAILALAAFILLAFLLPE 140

Length = 141

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score =  139 bits (353), Expect = 4e-36
 Identities = 85/410 (20%), Positives = 164/410 (40%), Gaps = 58/410 (14%)

Query: 45  LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGED 104
           L+++     L  +   ++ P +P     +G                              
Sbjct: 1   LLLLFLGFFLSGLDRGLLSPALPLLAEDLGL---------------------------SA 33

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFA 164
           S  G++ ++ ++   + +  +G L DR G    +++GL +  L + L A   S  +L   
Sbjct: 34  SQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVG 93

Query: 165 RSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGK 224
           R L G+G      +  A+IA+ F  + ER +ALG+  A    G L+ P  GG L +  G 
Sbjct: 94  RFLLGLGGGALYPAAAALIAEWFPPK-ERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152

Query: 225 EIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLM 284
              FLILA + LL   +LL +++ +                         +A+    L  
Sbjct: 153 RWLFLILAILGLLLALLLLFLLRLL-----------------------LLLALAFFLLSF 189

Query: 285 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV 344
               L    P     +++ L     + G++        + G ++   L+      + L++
Sbjct: 190 GYYGLLTYLPLY---LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLL 246

Query: 345 AVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSI 404
             GL+L  L   ++  + S  +L++ +  + FG+     ALL     L         G+ 
Sbjct: 247 I-GLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEAR---GTA 302

Query: 405 YAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK 454
             + +   SL  A+GP++AG ++D  G+  +  ++A + +L A +L+ L 
Sbjct: 303 SGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLLLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score =  114 bits (287), Expect = 1e-27
 Identities = 83/320 (25%), Positives = 133/320 (41%), Gaps = 9/320 (2%)

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFA 164
           +  G+L  + ++   +  P +G L DR G    ++IGL +  L   L     S  +L   
Sbjct: 32  TEIGLLLTAFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLLLFASSLWLLLVL 91

Query: 165 RSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGK 224
           R LQG+G      +  A+IAD F  E ER +ALG+  A    G  + P  GG L    G 
Sbjct: 92  RVLQGLGGGALFPAAAALIADWFPPE-ERGRALGLLSAGFGLGAALGPLLGGLLASLFGW 150

Query: 225 EIPFLILAFVSLLDGFM---LLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA 281
              FLILA ++LL   +   LL    P  ++    +      VP WKL +   +     A
Sbjct: 151 RAAFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWKLLLRDPVLWLLLA 210

Query: 282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW 341
           LL+   A   L   + L+ E  L       G++   A      G ++  +L+      + 
Sbjct: 211 LLLFGFAFFALLTYLPLYQEV-LGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRR 269

Query: 342 LMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC-FGMALVDTALLPTLGYLVDVRYVSV 400
           L++A+ L++       +   T   + +L    +  FG  LV  AL   +  L        
Sbjct: 270 LLLALLLLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNALVSDLAPKEER-- 327

Query: 401 YGSIYAIADISYSLAYAIGP 420
            G+   + + + SL  A+GP
Sbjct: 328 -GTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 72.3 bits (178), Expect = 2e-13
 Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 30/243 (12%)

Query: 538 PPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM 597
           P  GG L +  G    FLILA + LL   +LL +++ +                      
Sbjct: 140 PLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLRLL---------------------- 177

Query: 598 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVK 657
              +A+    L      L    P     +++ L     + G++        + G ++   
Sbjct: 178 -LLLALAFFLLSFGYYGLLTYLPLY---LQEVLGLSAAEAGLLLSLFGLGGILGALLGGL 233

Query: 658 LAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGY 717
           L+      + L++  GL+L  L   ++  + S  +L++ +  + FG+     ALL     
Sbjct: 234 LSDRLGRRRLLLLI-GLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASE 292

Query: 718 LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLI 777
           L         G+   + +   SL  A+GP++AG ++D  G+  +  ++A + +L A +L+
Sbjct: 293 LAPPEAR---GTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349

Query: 778 YLK 780
            L 
Sbjct: 350 LLP 352

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|225371 COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]

 Score = 63.4 bits (155), Expect = 2e-10
 Identities = 69/348 (19%), Positives = 129/348 (37%), Gaps = 45/348 (12%)

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFA 164
            A G L  + A+   +  P    L  R+     ++  L +  +S  L A   S+ VL  A
Sbjct: 48  GAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLA 107

Query: 165 RSLQGV--GSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA 222
           R+L G+  G  ++  + LA    R     +R +AL +    ++   ++  P G  L Q  
Sbjct: 108 RALAGLAHGVFWSIAAALAA---RLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164

Query: 223 GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL 282
           G    FL +A ++LL   +L  ++ P  E          +   + +L   P + +   A 
Sbjct: 165 GWRATFLAIAVLALLALLLLWKLL-PPSEISGSLPGPLRT---LLRLLRRPGVLLGLLAT 220

Query: 283 LMAN----VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITV------KL 332
            +          ++ P    ++E         + ++ L       FG+   +      +L
Sbjct: 221 FLFMTGHFALYTYIRP----FLESVAGFSVSAVSLVLL------AFGIAGFIGNLLGGRL 270

Query: 333 AKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL 392
           A   P      +   L+L  L    + F+ +   L L      +G A          G  
Sbjct: 271 ADRGPR---RALIAALLLLALALLALTFTGASPALAL-ALLFLWGFAFS----PALQGLQ 322

Query: 393 VDV-----RYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL 435
             +         + GS+   A   ++L  A+G  + G ++DA+G+ A 
Sbjct: 323 TRLARLAPDAADLAGSLNVAA---FNLGIALGAALGGLVLDALGYAAT 367

Length = 394

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 54.7 bits (132), Expect = 9e-08
 Identities = 50/213 (23%), Positives = 83/213 (38%), Gaps = 8/213 (3%)

Query: 538 PPFGGALYQFAGKEIPFLILAFVSLLDGFM---LLLVMKPVKEQLNQKKPESHSTVPIWK 594
           P  GG L    G    FLILA ++LL   +   LL    P  ++    +      VP WK
Sbjct: 138 PLLGGLLASLFGWRAAFLILAILALLAAVLAALLLPRPPPESKRPKPAEEAPAPLVPAWK 197

Query: 595 LFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVI 654
           L +   +     ALL+   A   L   + L+ E  L       G++   A      G ++
Sbjct: 198 LLLRDPVLWLLLALLLFGFAFFALLTYLPLYQEV-LGLSALLAGLLLGLAGLLGAIGRLL 256

Query: 655 TVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGIC-FGMALVDTALLP 713
             +L+      + L++A+ L++       +   T   + +L    +  FG  LV  AL  
Sbjct: 257 LGRLSDRLGRRRRLLLALLLLILAALGLALLSLTESSLWLLVALLLLGFGAGLVFPALNA 316

Query: 714 TLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP 746
            +  L         G+   + + + SL  A+GP
Sbjct: 317 LVSDLAPKEER---GTASGLYNTAGSLGGALGP 346

Length = 346

>gnl|CDD|233174 TIGR00893, 2A0114, D-galactonate transporter

 Score = 51.6 bits (124), Expect = 1e-06
 Identities = 63/377 (16%), Positives = 125/377 (33%), Gaps = 33/377 (8%)

Query: 103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLF 162
             +  G +F++ +   ++     G L+DR G    + + + I  + T L A   +Y  L+
Sbjct: 27  SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLY 86

Query: 163 FARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA 222
             R L G   A      + ++A  F    ER+ A+ I  +    G ++  P  G +    
Sbjct: 87  ILRVLLGAAEAPFFPGIILIVASWFPAS-ERATAVSIFNSAQGLGGIIGGPLVGWILIHF 145

Query: 223 GKEIPFLILAFVSLLDGFMLLLVMKPVKEQ-------------------LNQKKPESHST 263
             +  F+I   + ++ G + L  +    ++                      K P +   
Sbjct: 146 SWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKK 205

Query: 264 VPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHV 323
             I +L  D  +   +    + N+ L F       ++         + G +         
Sbjct: 206 YQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGF 265

Query: 324 FGVVITVKLAKLYPTYQWLMV----AVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGM- 378
            G+++  +L+ L       +V       +    L   +   +    +    +  +  G  
Sbjct: 266 IGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN-YVNIPYAALALVALGFF 324

Query: 379 ALVDTALLPTLGYLVDVRYV--SVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN 436
            L   A+   L        +     G I ++     +L   +GPIV G I    G  A  
Sbjct: 325 GLGAGAIGWALISDNAPGNIAGLTGGLINSLG----NLGGIVGPIVIGAIAATTGSFAGA 380

Query: 437 FLIAFMNILYAPVLIYL 453
            ++     L    L YL
Sbjct: 381 LMVVAALALIG-ALSYL 396

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 399

>gnl|CDD|184957 PRK14995, PRK14995, methyl viologen resistance protein SmvA; Provisional

 Score = 51.7 bits (124), Expect = 1e-06
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSG 179
           MV P  GAL DRIG+   +M+G  +  L++   A   +   L   R+L  +G+A    + 
Sbjct: 57  MVLPM-GALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPAT 115

Query: 180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGAL 218
           LA I   FTEE +R+ ALG+  A  S G    P  GG L
Sbjct: 116 LAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL 154

Length = 495

>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein

 Score = 50.3 bits (121), Expect = 3e-06
 Identities = 61/354 (17%), Positives = 122/354 (34%), Gaps = 29/354 (8%)

Query: 106 ATGVLFASKAIVQLMVNPFSGALIDR------------IGYDLPMMIGLCIMFLSTALFA 153
              +   ++ I     +P  GA+IDR            +   +P+ I L ++F +    +
Sbjct: 37  VGTIFLVAR-IWDAFTDPIVGAIIDRTRTRWGKFRPWLLIGAIPLAISLVLLFATPFGLS 95

Query: 154 CGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCL---- 209
                   F    L G+   F +    ++I     +  ER+          + G L    
Sbjct: 96  MTAKLIYAFITYILLGLAYTFVNIPYWSLIPVLTRDPKERTSLASYRRIGATIGGLLVAV 155

Query: 210 VAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKL 269
           +APP    L    G +  FL    +++L     L+     KE+++   PE    V +  +
Sbjct: 156 IAPPLVALLGGGNGAKGYFLAALIIAILAVVGFLICFAGTKERVSVP-PEQKEKVSLRDM 214

Query: 270 F-----MDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVF 324
           F       P + +     L+  +A+A     +  +    L        ++ L      + 
Sbjct: 215 FKALFKNRPLLILL-LLYLLNALAMAVRNGLLLYYFTYVLGNAGL-FSVLLLIGTIAAIL 272

Query: 325 GVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTA 384
           G  +   LAK +   +  ++ + L   GL         S  + ++ +     G+ L    
Sbjct: 273 GAPLWPWLAKRFGKKRTFLLGMLLAAIGLVLLFFLPPGSLWLFLVLVVLAGIGLGLATLL 332

Query: 385 LLPTLGYLVDVRYV----SVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTA 434
               L  +VD           G  +++   +  L  A+G  + G ++   G+ A
Sbjct: 333 PWAMLADVVDYGEWKTGKRREGITFSLYSFADKLGGALGGAIVGLLLAFAGYVA 386

This family is part of the major facilitator superfamily of membrane transport proteins. Length = 425

>gnl|CDD|223809 COG0738, FucP, Fucose permease [Carbohydrate transport and metabolism]

 Score = 48.1 bits (115), Expect = 1e-05
 Identities = 68/359 (18%), Positives = 120/359 (33%), Gaps = 50/359 (13%)

Query: 125 SGALIDRIGYDLPMMIGLCIMFLSTALF---ACGRSYGVLFFARSLQGVGSAFADTSGLA 181
           +G LI ++GY   +++GL +  +  ALF   A  +SYG    A  +   G    +T+   
Sbjct: 68  AGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANP 127

Query: 182 MIADRFTEENERSQALGIALAFISFGCLVAPPFGGAL-----YQFAGKEI---------- 226
            +      E+  +  L +A AF   G ++ P  G +L                       
Sbjct: 128 YVTLLGKPESA-AFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADAS 186

Query: 227 ----PFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL 282
               P+LILA + +L   ++LL   P  +        S S      LF + ++ +   A+
Sbjct: 187 SVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLS-SLFQNKHLRLGVLAI 245

Query: 283 LM---ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY 339
            +   A VA+     +    +              +   F     G  I   L       
Sbjct: 246 FLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFM---VGRFIGSALMSRIKPE 302

Query: 340 QWLM-VAVGLVLEGLCCFIIPFSTSY-QMLMLPICGICFGMALVDTALLPT---LGYLVD 394
           ++L   A+  +   L    +        +  L + G+   +      + PT   L     
Sbjct: 303 KYLAFYALIAI---LLLLAVALIGGVVALYALFLIGLFNSI------MFPTIFSLALKNL 353

Query: 395 VRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 453
             + SV   +  +A +      AI P + G I D  G            + Y  VL + 
Sbjct: 354 GEHTSVGSGLLVMAIVG----GAIIPPLQGVIADMFGIQLTFL--IVPLLCYLYVLFFA 406

Length = 422

>gnl|CDD|162098 TIGR00900, 2A0121, H+ Antiporter protein

 Score = 46.9 bits (112), Expect = 3e-05
 Identities = 66/346 (19%), Positives = 126/346 (36%), Gaps = 27/346 (7%)

Query: 102 GEDSATGVLFASKAIVQLMVNPFSGALIDR-------IGYDLPMMIGLCIMFLSTALFAC 154
           G  S   +   +  +  ++++P +GAL DR       IG DL  +  + +  L       
Sbjct: 31  GSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADL--IRAVLVAVLPFVALLG 88

Query: 155 GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPF 214
           G +   ++    +  +  AF   +  AM+ D   EE + +QA  ++ A  S   +V P  
Sbjct: 89  GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE-QLTQANSLSQAVRSLFYIVGPGI 147

Query: 215 GGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK----LF 270
           GG +Y   G +    + A    +   +++ V  P       +   +       +    + 
Sbjct: 148 GGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVL 207

Query: 271 MDPYI-AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVI- 328
            +P +  +   ALL   V    +           L   +   G  W+ A F    G ++ 
Sbjct: 208 KNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYG--WVLAAF--GLGALLG 263

Query: 329 --TVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALL 386
              + L   Y     LM     V+ GL   ++  +     L L    + F + +    + 
Sbjct: 264 ALLLGLLGRYFKRMALMTGAIFVI-GLAILVVGLTPPNFPLFLV---LWFAIGVGYGPIN 319

Query: 387 PTLGYLVDVRYVSVY-GSIYAIADISYSLAYAIGPIVAGGIVDAIG 431
              G L+  R  +   G ++         A+ +G I+AG + D +G
Sbjct: 320 VPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 365

>gnl|CDD|182127 PRK09874, PRK09874, drug efflux system protein MdtG; Provisional

 Score = 45.7 bits (108), Expect = 7e-05
 Identities = 92/363 (25%), Positives = 150/363 (41%), Gaps = 46/363 (12%)

Query: 107 TGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARS 166
           +G++F+   +   + +PF G L DR G  + ++     M +   L    ++       R+
Sbjct: 56  SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA 115

Query: 167 LQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEI 226
           L G+   F   +  A+IA +    N+   ALG        G L+ P  GG L    G   
Sbjct: 116 LLGLLGGFVPNAN-ALIATQ-VPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRP 173

Query: 227 PFLILAFVSLLDGFMLLLVMK----PV--KEQLNQKKPESHSTVPIWKLFMDPYIAVCSG 280
            F I A V  L   + L  ++    PV  KE L+ ++  +    P  KL +  ++     
Sbjct: 174 VFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNP--KLVLSLFVTT--- 228

Query: 281 ALLMANVALAFLEPTISLWIED---NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-- 335
             L+  VA   + P ++L++ +   N++   +  GMI   A  P V  ++   +L KL  
Sbjct: 229 --LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMI---ASVPGVAALLSAPRLGKLGD 283

Query: 336 -YPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVD 394
                + L+ A  L+   L   +IP S     L L I     G A  D ALLP +  L+ 
Sbjct: 284 RIGPEKILITA--LIFSVL--LLIPMSFVQTPLQLGILRFLLGAA--DGALLPAVQTLL- 336

Query: 395 VRYVSVYGSIYAIAD--ISYSLAY-----AIGPIVAGGIVDAIGFTALNFLIA---FMNI 444
                VY S   IA    SY+ ++       GP++   I    GF A+  + A     N 
Sbjct: 337 -----VYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNA 391

Query: 445 LYA 447
           +Y+
Sbjct: 392 VYS 394

Length = 408

>gnl|CDD|223553 COG0477, ProP, Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 53/298 (17%), Positives = 104/298 (34%), Gaps = 5/298 (1%)

Query: 99  HAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTAL--FACGR 156
                    G+L ++  +   + +  +G L DR G    ++IGL +  L T L   A   
Sbjct: 33  SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92

Query: 157 SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI-ALAFISFGCLVAPPFG 215
              +L   R LQG+G         A++++ F E  ER  A+G+  L   + G  + P   
Sbjct: 93  GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLA 152

Query: 216 GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYI 275
           G L         +     ++ L G +LL+++  +   L   +      + + +L     +
Sbjct: 153 GLLLGAL--LWGWRAAFLLAALLGLLLLILVLLLDLLLAAPRLPLAVGLALIELGKLLLL 210

Query: 276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL 335
            +      +  + L          +   L      +  +++ A    V   ++      L
Sbjct: 211 LLILLLGGLVLLLLGLYLSAAGFGLRALLLGLGLALLALFVGALILLVLLPILLGAAGGL 270

Query: 336 YPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLV 393
                     + L+L GL   +        ++      +     L+  ALL  +  LV
Sbjct: 271 SALVGAAGGLLALILLGLAGLLGTLVGGSLLVDRLGRSLGLRAILLAGALLLAILLLV 328

Length = 338

>gnl|CDD|233099 TIGR00710, efflux_Bcr_CflA, drug resistance transporter, Bcr/CflA subfamily

 Score = 45.1 bits (107), Expect = 1e-04
 Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 10/159 (6%)

Query: 115 AIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAF 174
           A  QL+  P S    DR G    +++GL I  LS+   A   +   L   R +Q  G++ 
Sbjct: 54  AAGQLLWGPLS----DRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASA 109

Query: 175 ADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFV 234
                 A++ D +  E E S+   I +  ++    VAP  GG +  +      F  L+  
Sbjct: 110 GSVISQALVRDIYPGE-ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLA 168

Query: 235 SLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDP 273
            +L   +  L+   + E L  +     ST   ++ F+  
Sbjct: 169 GIL---LSALIFFILPETLPYEARIQIST--YFETFLLL 202

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033. Length = 385

>gnl|CDD|183259 PRK11652, emrD, multidrug resistance protein D; Provisional

 Score = 44.5 bits (106), Expect = 2e-04
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 16/143 (11%)

Query: 124 FSGALIDRIGYDLPMMIGLCIMFLST--ALFACGRSYGVLFFARSLQGVGSAFADTSGLA 181
           F G L DR+G    +++G+ I  L T  ALFA   S  VL  A ++QG+G+         
Sbjct: 62  FYGPLSDRVGRRPVILVGMSIFILGTLVALFA--HSLTVLIAASAIQGLGTGVGGVMART 119

Query: 182 MIADRFTEENERSQALGIALAFISFGC----LVAPPFGGALYQFAGKEIPFLILAFVSLL 237
           +  D +     R      A + ++ G     L+AP  GG L    G    +L L    LL
Sbjct: 120 LPRDLYEGTQLRH-----ANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLL---LL 171

Query: 238 DGFMLLLVMKPVKEQLNQKKPES 260
              +   + + + E        +
Sbjct: 172 GAGVTFSMARWMPETRPADARRT 194

Length = 394

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 43.6 bits (103), Expect = 3e-04
 Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 5/173 (2%)

Query: 281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ 340
           A  +A +  + L P + L++ ++L     +IG++       +     +  +L+  +   +
Sbjct: 4   AAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRR 63

Query: 341 WLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV 400
            L++  GL+L  L   ++ F++S  +L++       G   +  A    +           
Sbjct: 64  VLLI--GLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEER-- 119

Query: 401 YGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 453
            G    +    + L  A+GP++ G +    G+ A   ++A + +L A +   L
Sbjct: 120 -GRALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALL 171

Length = 346

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 43.6 bits (103), Expect = 3e-04
 Identities = 31/173 (17%), Positives = 72/173 (41%), Gaps = 5/173 (2%)

Query: 607 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ 666
           A  +A +  + L P + L++ ++L     +IG++       +     +  +L+  +   +
Sbjct: 4   AAFLAGLGRSLLGPALPLYLAEDLGISPTEIGLLLTAFSLGYALAQPLAGRLSDRFGRRR 63

Query: 667 WLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV 726
            L++  GL+L  L   ++ F++S  +L++       G   +  A    +           
Sbjct: 64  VLLI--GLLLFALGLLLLLFASSLWLLLVLRVLQGLGGGALFPAAAALIADWFPPEER-- 119

Query: 727 YGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 779
            G    +    + L  A+GP++ G +    G+ A   ++A + +L A +   L
Sbjct: 120 -GRALGLLSAGFGLGAALGPLLGGLLASLFGWRAAFLILAILALLAAVLAALL 171

Length = 346

>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter

 Score = 43.4 bits (103), Expect = 4e-04
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 5/161 (3%)

Query: 89  RYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLS 148
           +                 +G++ +  ++  L+ + F+G L DR G    ++IG  +  + 
Sbjct: 30  KRFGALTSIGACAASTVLSGLIVSIFSVGCLIGSLFAGKLGDRFGRKKSLLIGNVLFVIG 89

Query: 149 TAL--FACGRSYGVLFFARSLQGVGSAFADTSGLA-MIADRFTEENERSQALGIALAFIS 205
             L  FA G+S+ +L   R + G+G      S L  M       +  R     +    I+
Sbjct: 90  ALLQGFAKGKSFYMLIVGRVIVGLGVGGI--SVLVPMYISEIAPKKLRGALGSLYQLGIT 147

Query: 206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVM 246
           FG LVA   G  L +++  +   + L    +    +L+ ++
Sbjct: 148 FGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPAILLLIGLL 188

Length = 449

>gnl|CDD|185300 PRK15402, PRK15402, multidrug efflux system translocase MdfA; Provisional

 Score = 43.4 bits (103), Expect = 4e-04
 Identities = 61/269 (22%), Positives = 100/269 (37%), Gaps = 45/269 (16%)

Query: 115 AIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAF 174
             +Q ++ P S    DRIG    M+ G+    L+       +S       R LQG+G  F
Sbjct: 62  MFLQWLLGPLS----DRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCF 117

Query: 175 ADTSGLAMIADRFTEENE-RSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAF 233
               G A I + F E +  +  AL   +A ++   L+ P  G AL         F++ A 
Sbjct: 118 IGAVGYAAIQESFEEADAIKITALMANVALLA--PLLGPLVGAALIHVLPWRGMFVLFAA 175

Query: 234 VSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL--------LMA 285
           ++ L  F L   M     ++ +K            +  +      +GAL        L+A
Sbjct: 176 LAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKN--RRFVAGALALGLVSLPLLA 233

Query: 286 NVALAFLEPTI------------SLW--------IEDNLT----TDNWKIGMIWLPAFFP 321
            +AL+   P I             L         I  NLT    T    +  +     +P
Sbjct: 234 WIALS---PVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWP 290

Query: 322 HVFGVVITVKLAKLYPTYQWLMVAVGLVL 350
            V G+++   LA +  ++ +L +  GL L
Sbjct: 291 MVAGLLLAA-LATVISSHAYLWLTAGLSL 318

Length = 406

>gnl|CDD|233166 TIGR00880, 2_A_01_02, Multidrug resistance protein

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKP 574
           ++  + GP   PP GG L QF G   PFL LA ++L    +L  ++  
Sbjct: 93  SAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140

Length = 141

>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

 Score = 41.5 bits (98), Expect = 0.001
 Identities = 31/179 (17%), Positives = 76/179 (42%), Gaps = 6/179 (3%)

Query: 601 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK 660
           + +      ++ +    L P + L  ED L     + G+I       +  G ++   L+ 
Sbjct: 1   LLLLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSD 59

Query: 661 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVD 720
            +      ++ +GL+L  L   ++ F++S  +L++    +  G   +  A    +     
Sbjct: 60  RFGR--RRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFP 117

Query: 721 VRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 779
            +     G    +    + L   +GP++ G + +++G+  L  ++A + +L A +L++L
Sbjct: 118 PKER---GRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL 173

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated. Length = 352

>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily

 Score = 42.0 bits (99), Expect = 0.001
 Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 94  PHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFA 153
           P ++E         G+L     ++  +     G L DR+G    +++ L ++ L+    A
Sbjct: 226 PLYQEVLGLSALLAGLLLGLAGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLA 285

Query: 154 C---GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLV 210
                 S   L  A  L G G+     +  A+++D   +E ER  A G+     S G  +
Sbjct: 286 LLSLTESSLWLLVALLLLGFGAGLVFPALNALVSDLAPKE-ERGTASGLYNTAGSLGGAL 344

Query: 211 AP 212
            P
Sbjct: 345 GP 346

Length = 346

>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter

 Score = 41.0 bits (96), Expect = 0.002
 Identities = 38/149 (25%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG--RSYGVLF 162
           S       S+    LM     G   DR G  LPM+    I+  S    ACG    Y  +F
Sbjct: 51  SLISAALISRWFGALMF----GLWGDRYGRRLPMVT--SIVLFSAGTLACGFAPGYITMF 104

Query: 163 FARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA 222
            AR + G+G      S  A + + + +   R++A G+ ++  + G +VA      +    
Sbjct: 105 IARLVIGIGMGGEYGSSAAYVIESWPKH-LRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163

Query: 223 GKEIPFLILAFVSLLDGFMLLLVMKPVKE 251
           G    +  L F+S+L     L + K + E
Sbjct: 164 G--DGWRALFFISILPIIFALWLRKNIPE 190

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 405

>gnl|CDD|233173 TIGR00892, 2A0113, monocarboxylate transporter 1

 Score = 40.9 bits (96), Expect = 0.003
 Identities = 79/347 (22%), Positives = 124/347 (35%), Gaps = 47/347 (13%)

Query: 117 VQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVL---FFARSLQGVGSA 173
           V     P S  L++R G    ++ G  +   S  +     S  V+     A  + G+G A
Sbjct: 66  VLYAGGPISSILVNRFGCRPVVIAGGLLA--SLGMILASFSSNVIELYLTAGFITGLGLA 123

Query: 174 FADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAF 233
           F     L M+   F     R  A G+A+A          P    L++  G    FLIL  
Sbjct: 124 FNFQPSLTMLGKYF--YRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGG 181

Query: 234 VSLLDGFMLLLVMKPVKEQLNQKKPESH---------------STVPIWKLFMD------ 272
           + LL   +   +M+PV       K +S                ST      F+D      
Sbjct: 182 L-LLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTH 240

Query: 273 -PYIAVCSGALLMANVALAFLEPTISL--WIEDNLTTDNWKIGMIWLPAFFPHVF----G 325
             ++   SG ++M    L F  P I L  + +D    +     ++ +  F         G
Sbjct: 241 RGFLVYLSGNVIM---FLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCG 297

Query: 326 VVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTAL 385
           ++  +K   + P  Q+L  +  L+  GL   +   +  Y  L++           V   L
Sbjct: 298 LIAGLKW--IRPHVQYLF-SFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALL 354

Query: 386 LPTLGYLVDV-RYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG 431
              L  LV   R+ S  G    +  I    A  IGP +AG +VDA  
Sbjct: 355 FEVLMDLVGAQRFSSAVG----LVTIVECCAVLIGPPLAGRLVDATK 397

[Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 455

>gnl|CDD|235348 PRK05122, PRK05122, major facilitator superfamily transporter; Provisional

 Score = 40.6 bits (96), Expect = 0.003
 Identities = 81/355 (22%), Positives = 137/355 (38%), Gaps = 54/355 (15%)

Query: 108 GVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTAL----FACGR----SYG 159
           G++ + + +  L+  P +G   D +G    ++ GLC   LS  L             S  
Sbjct: 54  GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLL 113

Query: 160 VLFFARSLQGVGSAFADT-SGLAMIADRFTEENERSQAL-GIALAFISFGCL-VAPPFGG 216
           +L   R L G+G + A T S L  I         R  +  GIA    ++G L +  P G 
Sbjct: 114 LLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIA----TYGALAIGAPLGV 169

Query: 217 ALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIA 276
            LY + G     L++  ++LL G +L      V     + +      V + +      + 
Sbjct: 170 LLYHWGGLAGLGLLIMLLALL-GLLLARPRPAVP--PVKGERLPFRRV-LGR------VW 219

Query: 277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVV-ITVKL--A 333
                L +A++    +   I+L+         W        A    +FGV  +  +L   
Sbjct: 220 PYGMGLALASIGFGTIATFITLYYAAR----GWDGA-----ALALTLFGVAFVGARLLFG 270

Query: 334 KLYPTYQWLMVA-VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL 392
            L      L VA V L++E L   ++  + S  M ++      FG +LV     P LG +
Sbjct: 271 NLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV----FPALG-V 325

Query: 393 VDVRYVSVYG-----SIYAI-ADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF 441
             V+ V           Y++  D+S  +    GP +AG +    G+ ++ FL A 
Sbjct: 326 EAVKRVPPQNRGAALGAYSVFLDLSLGIT---GP-LAGLVASWFGYPSI-FLAAA 375

Length = 399

>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter

 Score = 40.3 bits (95), Expect = 0.003
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 20/183 (10%)

Query: 126 GALIDRIGYDLPMMIGLCIMFLSTALFACGRSYG--------VLFFARSLQGVGSAFADT 177
           G   DRIG    ++I L +M + T L     SY         +L  AR +QG  S   + 
Sbjct: 56  GHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGF-SLGGEW 114

Query: 178 SGLAMIADRFTEENER---------SQALGIALAFISFGCLVAPPFGGALYQFAGKEIPF 228
            G A+    +    +R            +G+ LA ++   L       AL ++ G  IPF
Sbjct: 115 GGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW-GWRIPF 173

Query: 229 LILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVA 288
           L+ A + L+ G  L   ++        ++       PI +           G  L+    
Sbjct: 174 LVSAVLVLI-GLYLRRNLEETPVFEKAQEKHKKKRGPIAETLTKHRKPFLLGLGLVIATT 232

Query: 289 LAF 291
             F
Sbjct: 233 TTF 235

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc [Transport and binding proteins, Unknown substrate]. Length = 394

>gnl|CDD|162096 TIGR00897, 2A0118, polyol permease family

 Score = 40.2 bits (94), Expect = 0.004
 Identities = 85/342 (24%), Positives = 126/342 (36%), Gaps = 35/342 (10%)

Query: 124 FSGALIDRIGYDLPMMIGLCIMFLSTALF---ACGR-SYGVLFFARSLQGVGSAFADTSG 179
            SG + + IG    MMIGL +  +  A F     G  +Y ++     ++G+G      S 
Sbjct: 67  ISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSF 126

Query: 180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILA-FVSLLD 238
           L  +    T+++  S A+G   A  S G  V   +  +    A  E+  L  A    L  
Sbjct: 127 LVWVVYN-TKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTG 185

Query: 239 GFMLLLVMK----PVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEP 294
           G + L   K    P   Q  +K  E      I  LF +P + +  G + + N    F   
Sbjct: 186 GVIALFSNKDIFTPQHMQTREKFSELGKAATI--LFTNPNVLL-GGMVRIINTIGLFGFA 242

Query: 295 TI--SLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY---PTYQWLMVAVGLV 349
                   E   +T  W    IW   FF ++   VI   +        T +W    VG  
Sbjct: 243 VFLPMFVAELGFSTSEWL--QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFG-GVGCG 299

Query: 350 LEGLCCFIIPFSTSYQMLMLPICGICFGMALVD----TALLPTLGYLVDVRYVSVYGSIY 405
           +  L  + IP    +   +  I  I  G+ L       A+ PTL        +SV     
Sbjct: 300 IFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPLAAVFPTLAPKHKGAAMSVLN--- 356

Query: 406 AIADISYSLAYAI-----GPIVAGGIVDAIGFTALNFLIAFM 442
             A +S  LA AI     G   A G+V    F AL  + AF+
Sbjct: 357 LSAGLSAFLAPAIAVLFIGFFGAIGVV--WIFAALYVVSAFL 396

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]. Length = 402

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	871
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	100.0
KOG3764|consensus	464		100.0
PRK03545	390	putative arabinose transporter; Provisional	100.0
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	100.0
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	100.0
PRK11663	434	regulatory protein UhpC; Provisional	100.0
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	100.0
PRK14995	495	methyl viologen resistance protein SmvA; Provision	100.0
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	100.0
PRK10642	490	proline/glycine betaine transporter; Provisional	100.0
PRK10213	394	nepI ribonucleoside transporter; Reviewed	100.0
PRK09705	393	cynX putative cyanate transporter; Provisional	100.0
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	100.0
PRK03699	394	putative transporter; Provisional	100.0
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	100.0
TIGR00892	455	2A0113 monocarboxylate transporter 1.	100.0
PRK10504	471	putative transporter; Provisional	100.0
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	100.0
PLN00028	476	nitrate transmembrane transporter; Provisional	100.0
TIGR00893	399	2A0114 d-galactonate transporter.	100.0
PRK10489	417	enterobactin exporter EntS; Provisional	100.0
PRK10091	382	MFS transport protein AraJ; Provisional	100.0
PRK12307	426	putative sialic acid transporter; Provisional	100.0
TIGR00891	405	2A0112 putative sialic acid transporter.	100.0
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	100.0
TIGR00900	365	2A0121 H+ Antiporter protein.	100.0
PRK05122	399	major facilitator superfamily transporter; Provisi	100.0
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	100.0
PRK15403	413	multidrug efflux system protein MdtM; Provisional	100.0
PRK09874	408	drug efflux system protein MdtG; Provisional	100.0
PRK03893	496	putative sialic acid transporter; Provisional	100.0
TIGR00897	402	2A0118 polyol permease family. This family of prot	100.0
PRK03633	381	putative MFS family transporter protein; Provision	100.0
PRK10406	432	alpha-ketoglutarate transporter; Provisional	100.0
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	100.0
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	100.0
PRK12382	392	putative transporter; Provisional	100.0
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	100.0
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.98
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.98
PRK10133	438	L-fucose transporter; Provisional	99.98
COG2814	394	AraJ Arabinose efflux permease [Carbohydrate trans	99.98
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.98
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.98
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.98
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.97
PRK10054	395	putative transporter; Provisional	99.97
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.97
PRK15075	434	citrate-proton symporter; Provisional	99.97
COG2271	448	UhpC Sugar phosphate permease [Carbohydrate transp	99.97
PRK09952	438	shikimate transporter; Provisional	99.97
PRK15011	393	sugar efflux transporter B; Provisional	99.97
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.97
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.97
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.97
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.97
PRK14995	495	methyl viologen resistance protein SmvA; Provision	99.97
PRK11043	401	putative transporter; Provisional	99.97
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.97
KOG3764|consensus	464		99.97
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.97
PRK11010	491	ampG muropeptide transporter; Validated	99.97
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.97
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.97
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.97
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.97
PRK11663	434	regulatory protein UhpC; Provisional	99.97
PRK03545	390	putative arabinose transporter; Provisional	99.97
KOG2532|consensus	466		99.97
PRK09528	420	lacY galactoside permease; Reviewed	99.97
KOG1330|consensus	493		99.96
TIGR00895	398	2A0115 benzoate transport.	99.96
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.96
PRK10504	471	putative transporter; Provisional	99.96
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.96
PRK09556	467	uhpT sugar phosphate antiporter; Reviewed	99.96
PRK11902	402	ampG muropeptide transporter; Reviewed	99.96
TIGR00898	505	2A0119 cation transport protein.	99.96
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.96
TIGR00892	455	2A0113 monocarboxylate transporter 1.	99.96
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.96
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.96
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.96
PRK11273	452	glpT sn-glycerol-3-phosphate transporter; Provisio	99.96
TIGR00893	399	2A0114 d-galactonate transporter.	99.96
PRK10489	417	enterobactin exporter EntS; Provisional	99.96
PLN00028	476	nitrate transmembrane transporter; Provisional	99.96
TIGR02332	412	HpaX 4-hydroxyphenylacetate permease. This protein	99.96
PRK10091	382	MFS transport protein AraJ; Provisional	99.95
PRK09705	393	cynX putative cyanate transporter; Provisional	99.95
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.95
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.95
TIGR00899	375	2A0120 sugar efflux transporter. This family of pr	99.95
TIGR00897	402	2A0118 polyol permease family. This family of prot	99.95
TIGR00712	438	glpT glycerol-3-phosphate transporter. This model	99.95
TIGR00711	485	efflux_EmrB drug resistance transporter, EmrB/QacA	99.95
PRK05122	399	major facilitator superfamily transporter; Provisi	99.95
PRK11646	400	multidrug resistance protein MdtH; Provisional	99.95
PRK03699	394	putative transporter; Provisional	99.95
KOG2504|consensus	509		99.95
PRK10213	394	nepI ribonucleoside transporter; Reviewed	99.95
PRK09874	408	drug efflux system protein MdtG; Provisional	99.95
PRK10054	395	putative transporter; Provisional	99.95
TIGR00900	365	2A0121 H+ Antiporter protein.	99.95
PRK12382	392	putative transporter; Provisional	99.95
TIGR00902	382	2A0127 phenyl proprionate permease family protein.	99.95
KOG2532|consensus	466		99.95
TIGR00903	368	2A0129 major facilitator 4 family protein. This fa	99.95
PRK15402	406	multidrug efflux system translocase MdfA; Provisio	99.95
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.95
PRK03633	381	putative MFS family transporter protein; Provision	99.95
PRK09528	420	lacY galactoside permease; Reviewed	99.95
TIGR00890	377	2A0111 Oxalate/Formate Antiporter.	99.95
PRK03893	496	putative sialic acid transporter; Provisional	99.95
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.94
PRK11195	393	lysophospholipid transporter LplT; Provisional	99.94
PRK11551	406	putative 3-hydroxyphenylpropionic transporter MhpT	99.94
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.94
PRK10642	490	proline/glycine betaine transporter; Provisional	99.94
KOG2533|consensus	495		99.94
PRK15011	393	sugar efflux transporter B; Provisional	99.94
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.94
TIGR00901	356	2A0125 AmpG-related permease.	99.94
TIGR00881	379	2A0104 phosphoglycerate transporter family protein	99.94
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.94
TIGR00710	385	efflux_Bcr_CflA drug resistance transporter, Bcr/C	99.94
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.94
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.94
PRK12307	426	putative sialic acid transporter; Provisional	99.94
PRK10473	392	multidrug efflux system protein MdtL; Provisional	99.94
TIGR01299	742	synapt_SV2 synaptic vesicle protein SV2. This mode	99.94
TIGR00891	405	2A0112 putative sialic acid transporter.	99.93
PF05977	524	MFS_3: Transmembrane secretion effector; InterPro:	99.93
KOG2615|consensus	451		99.93
PRK11128	382	putative 3-phenylpropionic acid transporter; Provi	99.93
TIGR00894	465	2A0114euk Na(+)-dependent inorganic phosphate cotr	99.93
PRK11043	401	putative transporter; Provisional	99.93
PRK10133	438	L-fucose transporter; Provisional	99.93
PRK15403	413	multidrug efflux system protein MdtM; Provisional	99.93
TIGR00882	396	2A0105 oligosaccharide:H+ symporter.	99.93
COG2223	417	NarK Nitrate/nitrite transporter [Inorganic ion tr	99.93
PRK11010	491	ampG muropeptide transporter; Validated	99.93
PRK09952	438	shikimate transporter; Provisional	99.93
PF07690	352	MFS_1: Major Facilitator Superfamily; InterPro: IP	99.93
KOG2504|consensus	509		99.92
PRK10406	432	alpha-ketoglutarate transporter; Provisional	99.92
KOG0569|consensus	485		99.92
TIGR00879	481	SP MFS transporter, sugar porter (SP) family. This	99.92
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.92
TIGR00886	366	2A0108 nitrite extrusion protein (nitrite facilita	99.92
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.92
cd06174	352	MFS The Major Facilitator Superfamily (MFS) is a l	99.92
PRK11102	377	bicyclomycin/multidrug efflux system; Provisional	99.92
PRK15034	462	nitrate/nitrite transport protein NarU; Provisiona	99.92
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.92
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.92
TIGR00895	398	2A0115 benzoate transport.	99.92
TIGR00805	633	oat sodium-independent organic anion transporter.	99.92
PRK06814	1140	acylglycerophosphoethanolamine acyltransferase; Pr	99.92
PRK10207	489	dipeptide/tripeptide permease B; Provisional	99.92
TIGR00889	418	2A0110 nucleoside transporter. This family of prot	99.91
PRK11902	402	ampG muropeptide transporter; Reviewed	99.91
PRK15075	434	citrate-proton symporter; Provisional	99.91
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.91
PRK11652	394	emrD multidrug resistance protein D; Provisional	99.91
PF06609	599	TRI12: Fungal trichothecene efflux pump (TRI12); I	99.91
TIGR00896	355	CynX cyanate transporter. This family of proteins	99.91
PRK10077	479	xylE D-xylose transporter XylE; Provisional	99.91
TIGR00924	475	yjdL_sub1_fam amino acid/peptide transporter (Pept	99.91
TIGR00885	410	fucP L-fucose:H+ symporter permease. This family d	99.9
TIGR00883	394	2A0106 metabolite-proton symporter. This model rep	99.9
TIGR00887	502	2A0109 phosphate:H+ symporter. This model represen	99.9
PRK09669	444	putative symporter YagG; Provisional	99.9
PRK08633	1146	2-acyl-glycerophospho-ethanolamine acyltransferase	99.89
TIGR00792	437	gph sugar (Glycoside-Pentoside-Hexuronide) transpo	99.89
TIGR02718	390	sider_RhtX_FptX siderophore transporter, RhtX/FptX	99.89
TIGR00898	505	2A0119 cation transport protein.	99.89
PRK10429	473	melibiose:sodium symporter; Provisional	99.89
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.88
PRK09848	448	glucuronide transporter; Provisional	99.88
PF13347	428	MFS_2: MFS/sugar transport protein	99.88
PF01306	412	LacY_symp: LacY proton/sugar symporter; InterPro:	99.88
KOG0252|consensus	538		99.88
KOG0254|consensus	513		99.87
PRK09584	500	tppB putative tripeptide transporter permease; Rev	99.87
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.87
COG2807	395	CynX Cyanate permease [Inorganic ion transport and	99.86
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.86
KOG0255|consensus	521		99.85
KOG2533|consensus	495		99.85
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.85
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.85
PTZ00207	591	hypothetical protein; Provisional	99.85
TIGR00901	356	2A0125 AmpG-related permease.	99.85
TIGR00806	511	rfc RFC reduced folate carrier. Proteins of the RF	99.85
PRK11462	460	putative transporter; Provisional	99.84
PRK09848	448	glucuronide transporter; Provisional	99.84
KOG4686|consensus	459		99.84
COG2211	467	MelB Na+/melibiose symporter and related transport	99.84
COG0738	422	FucP Fucose permease [Carbohydrate transport and m	99.83
KOG0253|consensus	528		99.83
TIGR00805	633	oat sodium-independent organic anion transporter.	99.83
PF03825	400	Nuc_H_symport: Nucleoside H+ symporter	99.82
KOG1330|consensus	493		99.82
PRK10429	473	melibiose:sodium symporter; Provisional	99.81
PRK09669	444	putative symporter YagG; Provisional	99.81
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.8
PF13347	428	MFS_2: MFS/sugar transport protein	99.8
PRK15462	493	dipeptide/tripeptide permease D; Provisional	99.8
TIGR00788	468	fbt folate/biopterin transporter. The only functio	99.79
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.79
PRK11462	460	putative transporter; Provisional	99.78
KOG2615|consensus	451		99.78
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.76
PTZ00207	591	hypothetical protein; Provisional	99.76
TIGR01301	477	GPH_sucrose GPH family sucrose/H+ symporter. This	99.76
COG2211	467	MelB Na+/melibiose symporter and related transport	99.75
PF11700	477	ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0	99.75
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.74
KOG2325|consensus	488		99.73
TIGR01272	310	gluP glucose/galactose transporter. Disruption of	99.72
KOG0253|consensus	528		99.72
KOG0569|consensus	485		99.72
KOG2563|consensus	480		99.71
KOG4686|consensus	459		99.69
COG3104	498	PTR2 Dipeptide/tripeptide permease [Amino acid tra	99.69
KOG0252|consensus	538		99.67
KOG2816|consensus	463		99.65
KOG0255|consensus	521		99.65
PF03209	403	PUCC: PUCC protein; InterPro: IPR004896 This prote	99.64
PF00083	451	Sugar_tr: Sugar (and other) transporter; InterPro:	99.57
KOG0254|consensus	513		99.57
COG2270	438	Permeases of the major facilitator superfamily [Ge	99.54
KOG3626|consensus	735		99.54
KOG2563|consensus	480		99.51
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.49
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.49
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.49
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.48
KOG3762|consensus	618		99.38
KOG3626|consensus	735		99.33
KOG2816|consensus	463		99.32
PF03092	433	BT1: BT1 family; InterPro: IPR004324 Members of th	99.3
PF03137	539	OATP: Organic Anion Transporter Polypeptide (OATP)	99.28
KOG2325|consensus	488		99.21
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.17
PF01770	412	Folate_carrier: Reduced folate carrier; InterPro:	99.15
KOG3762|consensus	618		99.07
PF05631	354	DUF791: Protein of unknown function (DUF791); Inte	99.04
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.03
TIGR00880	141	2_A_01_02 Multidrug resistance protein.	99.03
KOG3098|consensus	461		99.01
PF06963	432	FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi	99.01
KOG0637|consensus	498		98.94
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.94
KOG3574|consensus	510		98.87
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.75
COG0477	338	ProP Permeases of the major facilitator superfamil	98.73
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	98.71
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.7
KOG4332|consensus	454		98.54
TIGR00926	654	2A1704 Peptide:H+ symporter (also transports b-lac	98.46
KOG0637|consensus	498		98.4
PF02487	402	CLN3: CLN3 protein; InterPro: IPR003492 Batten's d	98.38
TIGR00769	472	AAA ADP/ATP carrier protein family. These proteins	98.36
KOG3810|consensus	433		98.33
PF06813	250	Nodulin-like: Nodulin-like; InterPro: IPR010658 Th	98.33
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	98.18
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	98.16
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	98.15
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	98.11
KOG1237|consensus	571		98.06
KOG1237|consensus	571		98.05
PF12832	77	MFS_1_like: MFS_1 like family	98.02
KOG3574|consensus	510		97.97
KOG3810|consensus	433		97.9
KOG4332|consensus	454		97.88
COG3202	509	ATP/ADP translocase [Energy production and convers	97.86
KOG3098|consensus	461		97.82
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.77
PF12832	77	MFS_1_like: MFS_1 like family	97.63
PF13000	544	Acatn: Acetyl-coenzyme A transporter 1; InterPro:	97.51
TIGR00939	437	2a57 Equilibrative Nucleoside Transporter (ENT).	97.41
COG0477	338	ProP Permeases of the major facilitator superfamil	97.34
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	97.26
KOG3880|consensus	409		97.23
KOG1479|consensus	406		97.21
PF06779	85	DUF1228: Protein of unknown function (DUF1228); In	97.17
PRK03612	521	spermidine synthase; Provisional	97.16
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	96.84
PRK03612	521	spermidine synthase; Provisional	96.82
KOG1479|consensus	406		96.78
PF05978	156	UNC-93: Ion channel regulatory protein UNC-93; Int	96.54
PF00854	372	PTR2: POT family; InterPro: IPR000109 This entry r	96.43
PF03219	491	TLC: TLC ATP/ADP transporter; InterPro: IPR004667	96.42
KOG3097|consensus	390		96.3
KOG2601|consensus	503		94.87
KOG4830|consensus	412		94.69
KOG3880|consensus	409		94.56
COG3202	509	ATP/ADP translocase [Energy production and convers	92.84
PF01733	309	Nucleoside_tran: Nucleoside transporter; InterPro:	90.99
PF07672	267	MFS_Mycoplasma: Mycoplasma MFS transporter; InterP	90.01
KOG2601|consensus	503		86.9
PF03547	385	Mem_trans: Membrane transport protein; InterPro: I	80.19

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-36  Score=318.81  Aligned_cols=378  Identities=19%  Similarity=0.215  Sum_probs=321.3

Q ss_pred             cccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHH
Q psy17194         39 SQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQ  118 (871)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~  118 (871)
                      +..+..++.+.++.|..+........++|++.+|+|+                           |..+.|++.+.|.++.
T Consensus         9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v---------------------------s~~~aG~lis~yAl~~   61 (394)
T COG2814           9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV---------------------------SEGAAGQLITAYALGV   61 (394)
T ss_pred             ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC---------------------------CHHHHHHHHHHHHHHH
Confidence            3445667888899999999999999999999999977                           8999999999999999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHH
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALG  198 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g  198 (871)
                      .+++|+...+.||+.||++++..+.++.++.+++++++||+.++++|++.|+..|.+++...++.++++ |+++|+++++
T Consensus        62 ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv-pp~~~~~Aia  140 (394)
T COG2814          62 ALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV-PPGKRGRALA  140 (394)
T ss_pred             HHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CccchhhHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999999997 6689999999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHH
Q psy17194        199 IALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVC  278 (871)
Q Consensus       199 ~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (871)
                      +...+.+++.++|.++|.++.+.+|||.+|++.+.++++..+..+...|  |.+  .+++.+.+..+..+.+|+|.++..
T Consensus       141 iv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~~~~~~~~l~~p~v~~~  216 (394)
T COG2814         141 LVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE--ISGSLPGPLRTLLRLLRRPGVLLG  216 (394)
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcchhHHHHHhcCchHHHH
Confidence            9999999999999999999999999999999999999999888888887  111  111222333456789999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q psy17194        279 SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII  358 (871)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~  358 (871)
                      ....++...+.+..++|+.+++++..|++...+++++..++++.++|+.++|++.|| +.++.+  .....+..+..+.+
T Consensus       217 l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l--~~~~~l~a~~~l~l  293 (394)
T COG2814         217 LLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL--IAALLLLALALLAL  293 (394)
T ss_pred             HHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH--HHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999 777744  44444444444444


Q ss_pred             hc-chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHH
Q psy17194        359 PF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNF  437 (871)
Q Consensus       359 ~~-~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~  437 (871)
                      .+ ..+.+...+..++.++.....   .........+ ..|+.++.+.+++....++|.++|..++|.+.|+.|+....+
T Consensus       294 ~~~~~~~~~~~~~~~~wg~a~~~~---~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~  369 (394)
T COG2814         294 TFTGASPALALALLFLWGFAFSPA---LQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGW  369 (394)
T ss_pred             HHhcchHHHHHHHHHHHHHHhhhh---hhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence            43 344444444444444444332   3444444555 456889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q psy17194        438 LIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~  455 (871)
                      +.+++.+++..+.+...+
T Consensus       370 ~~a~l~~~a~~~~~~~~~  387 (394)
T COG2814         370 VGAALLLLALLLALLSAR  387 (394)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999888887776665444

>KOG3764|consensus

Probab=100.00  E-value=1.6e-37  Score=315.29  Aligned_cols=421  Identities=54%  Similarity=0.884  Sum_probs=364.5

Q ss_pred             hhhccCcccccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHh----------hhhcccC---------
Q psy17194         31 WEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQA----------LNESRYH---------   91 (871)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~----------~~~~~~~---------   91 (871)
                      ++..+++++.|+.++.+++++.+++++..+.+.|++|.+..|.+....+.+...          -+.+-+.         
T Consensus         9 ~~~~~~~r~~r~lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~   88 (464)
T KOG3764|consen    9 LKLLVEQRRSRPLILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTN   88 (464)
T ss_pred             hhhhhccccccceEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccc
Confidence            345566777778888899999999999999999999999999762000000000          0000000         


Q ss_pred             ----CCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy17194         92 ----TKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSL  167 (871)
Q Consensus        92 ----~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l  167 (871)
                          ..|-++...+.+.+++|++++++.+.+.+.+|+.|.+.||+|+|..+++|+.+...+++++++.++++.++++|.+
T Consensus        89 a~~~~~~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~L  168 (464)
T KOG3764|consen   89 ASAGKSPAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSL  168 (464)
T ss_pred             cccccCchhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHH
Confidence                1112235667788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcc
Q psy17194        168 QGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK  247 (871)
Q Consensus       168 ~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~  247 (871)
                      ||+|.++..++..++++|.|+++++|++++|+.....++|.++||+.||++++..|.+.+|++.+++.++...+-++.++
T Consensus       169 QgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~  248 (464)
T KOG3764|consen  169 QGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE  248 (464)
T ss_pred             hhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence            99999999999999999999888889999999999999999999999999999999999999999999999998888886


Q ss_pred             cchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHH
Q psy17194        248 PVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVV  327 (871)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~  327 (871)
                      +.+...+    ...+..++++++++|..+.........+.+.....+.++.++.|.+..+..+.|+.+....+.+.++..
T Consensus       249 p~~~~~~----~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~  324 (464)
T KOG3764|consen  249 PTEMDPD----STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTN  324 (464)
T ss_pred             ccccCcc----ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCc
Confidence            6443221    334556789999999999999888888899999999999999999886677999999999999999999


Q ss_pred             HHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc---chhhH
Q psy17194        328 ITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS---VYGSI  404 (871)
Q Consensus       328 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~---~rg~a  404 (871)
                      +.|.++||++..+++....+++..+..+...++.+++..+++..+..+++.+.......+...+++|.++.+   ..|..
T Consensus       325 lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsV  404 (464)
T KOG3764|consen  325 LFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSV  404 (464)
T ss_pred             hHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeH
Confidence            999999999977777778888888888888889999999999999999999999999999999999987766   78999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        405 YAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       405 ~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .++......+|.++||.++|.+.+..|++|...+.++..++...++.+++.
T Consensus       405 yaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~  455 (464)
T KOG3764|consen  405 YAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI  455 (464)
T ss_pred             HHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999988888877776655

>PRK03545 putative arabinose transporter; Provisional

Probab=100.00  E-value=2.9e-34  Score=319.39  Aligned_cols=374  Identities=14%  Similarity=0.132  Sum_probs=294.6

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      +++..+..+.++.++.........+++|.+.+++|.                           |+.+.|++.+.+.+++.
T Consensus         6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------s~~~~g~~~~~~~~~~~   58 (390)
T PRK03545          6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM---------------------------QTAQVGLMLTIYAWVVA   58 (390)
T ss_pred             cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            345455555665565545555667788999999866                           89999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      +++++.|+++||+|||+++..+.++.+++++++++++|++.++++|+++|++.+...+...+++.|++ |+++|++++|+
T Consensus        59 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~g~  137 (390)
T PRK03545         59 LMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVA-PAGKKAQALSL  137 (390)
T ss_pred             HHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ChhhhhhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999986 67899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHH
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCS  279 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (871)
                      ...+.++|.++||++++.+.+++|||+.|++.++++++..++.+...|+.+++      ++....+.++.+|+|.++...
T Consensus       138 ~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~  211 (390)
T PRK03545        138 LATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSE------HSGSLKSLPLLFRRPALVSLY  211 (390)
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC------CcchHHHHHHHHhCcHHHHHH
Confidence            99999999999999999999999999999999988877766666555543221      111223456788888877665


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH-Hh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF-II  358 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-~~  358 (871)
                      ...++..........+.+.++++.+|.+..+.+++.+...++.+++.++.+++.||+++|+..   .+..+..++.. ..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~---~~~~~~~~~~~~l~  288 (390)
T PRK03545        212 LLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL---IAIALLLVCLLLLL  288 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH---HHHHHHHHHHHHHH
Confidence            555555555555567778888888899999999999999999999999999999999976532   22233333322 23


Q ss_pred             hcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHH
Q psy17194        359 PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFL  438 (871)
Q Consensus       359 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~  438 (871)
                      ...++.+.+++..++.|++.+...+...   ....+. .++.+++++|+.+....+|..+||.++|.+.|++|++..|++
T Consensus       289 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~-~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~  364 (390)
T PRK03545        289 PAANSEWHLSVLSIFWGIAIMCIGLAMQ---VKVLKL-APDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYV  364 (390)
T ss_pred             HHhchHHHHHHHHHHHHHHHhcchHHHH---HHHHHh-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHH
Confidence            3445566666666677777655433222   223333 347889999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHh
Q psy17194        439 IAFMNILYAPVLIYLK  454 (871)
Q Consensus       439 ~~~~~~~~~~~~~~~~  454 (871)
                      .+.+.+++++......
T Consensus       365 ~~~~~~~~~~~~~~~~  380 (390)
T PRK03545        365 GAALALAALVWSILIF  380 (390)
T ss_pred             HHHHHHHHHHHHHHHc
Confidence            8888877766655443

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.2e-35  Score=301.13  Aligned_cols=386  Identities=14%  Similarity=0.089  Sum_probs=319.4

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      .|+.++..+++++...++.+.......|.+.++.+.                           |.+|+|++.+++.+.+.
T Consensus        26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l---------------------------sk~~lG~i~s~f~i~YG   78 (448)
T COG2271          26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL---------------------------SKTQLGILGSAFSITYG   78 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            345677888899999999999999999999999765                           89999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      ++-.+.|.++||.++|+.+.+++++.++..++++++++++.+.++.++.|+.+|...|.+...+..|+ +++|||+..++
T Consensus        79 ~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf-sr~eRG~~~si  157 (448)
T COG2271          79 VSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWF-SRKERGTWWSI  157 (448)
T ss_pred             HHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc-CccccCceEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999998 67899999999


Q ss_pred             HHHHHHHHHHHhHHHH--HHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc------------c--CCCCCCcc
Q psy17194        200 ALAFISFGCLVAPPFG--GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN------------Q--KKPESHST  263 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~--~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~------------~--~~~~~~~~  263 (871)
                      ++.+.++|..+.|++.  +++..+++||..|++.++++++..++.++..++.|++..            +  +++++.+.
T Consensus       158 Wn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~  237 (448)
T COG2271         158 WNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEG  237 (448)
T ss_pred             ehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCC
Confidence            9999999999999999  888888899999999999999999999999888774321            0  01111111


Q ss_pred             cc-----hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc--
Q psy17194        264 VP-----IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--  336 (871)
Q Consensus       264 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--  336 (871)
                      .+     .+.+++||.+|.+++...+....-+.+..+.|.|+.|..|+|...+++..+.+=++.+.|.++.|+++||+  
T Consensus       238 ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfk  317 (448)
T COG2271         238 LTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFK  317 (448)
T ss_pred             ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcc
Confidence            22     33467899999999999999999999999999999999999999999999999999999999999999996  


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH-H
Q psy17194        337 PTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-A  415 (871)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l-g  415 (871)
                      |||. ...++.+++..++...+-.+++...++...+++.+|+....|. +-.-....|..|++..|++.|+...+..+ |
T Consensus       318 grR~-p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~G  395 (448)
T COG2271         318 GRRG-PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFVGLFAYLIG  395 (448)
T ss_pred             cccc-hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchhhhHHHHhh
Confidence            4444 3344455555566666655554433333334444444443232 22222344556778899999999999999 8


Q ss_pred             HHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        416 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       416 ~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .+.+....|++.|.+||...|++..+.++++.+++....+
T Consensus       396 a~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~  435 (448)
T COG2271         396 AALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN  435 (448)
T ss_pred             HHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999988887777666554443

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=100.00  E-value=2.4e-34  Score=327.21  Aligned_cols=382  Identities=13%  Similarity=0.043  Sum_probs=294.0

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .+..+...++++++.++++..+.+.+|.+.+++|.                           +..+.|++.+++.+++.+
T Consensus        27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~---------------------------s~~~~g~~~s~~~~~~~~   79 (467)
T PRK09556         27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL---------------------------STTELGMIGLGFSITYGV   79 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34456677888888899999999999999999876                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFAC-----GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-----a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      ++++.|+++||+|||+++.++.++.+++.+..++     +++++.+++.|+++|++.+...+...++++|++ |+++|++
T Consensus        80 ~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~rg~  158 (467)
T PRK09556         80 GKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT-PRRKRGR  158 (467)
T ss_pred             HHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc-Cccceee
Confidence            9999999999999999999888888777766654     589999999999999999999999999999997 6689999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhh---CChhHHHHHHHHHHHHHHHHHHhcccchhhhcc---------C---CCC-
Q psy17194        196 ALGIALAFISFGCLVAPPFGGALYQFA---GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ---------K---KPE-  259 (871)
Q Consensus       196 ~~g~~~~~~~~G~~lg~~l~~~l~~~~---gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~---------~---~~~-  259 (871)
                      ++|++..+.++|.++++++..++.+.+   +||..|.+.+++.++..++.+++.++.|++.+.         .   +++ 
T Consensus       159 a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  238 (467)
T PRK09556        159 FLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKE  238 (467)
T ss_pred             eEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhc
Confidence            999999999999999999988777653   699999998888887777777766665543110         0   000 


Q ss_pred             -CCcccc-----hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHH
Q psy17194        260 -SHSTVP-----IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLA  333 (871)
Q Consensus       260 -~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~  333 (871)
                       ++....     .++.+|+|.++...+..++..........+.|.|+++.+|.+..+.++..+...++.+++.+++|+++
T Consensus       239 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~ls  318 (467)
T PRK09556        239 TESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLS  318 (467)
T ss_pred             cccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             000111     12267889999888888887777777888999999999999999999999888999999999999999


Q ss_pred             hhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHH
Q psy17194        334 KLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS  413 (871)
Q Consensus       334 dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~  413 (871)
                      ||+++|+...............+.....++.+...+..++.|++....   .........+..|++.+|++.|+.+...+
T Consensus       319 Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~---~~~~~~~~~~~~p~~~~g~a~gi~~~~g~  395 (467)
T PRK09556        319 DLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGP---QLLIGVAAVGFVPKKAIGVANGIKGTFAY  395 (467)
T ss_pred             HHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhH---HHHHHHHHHhhcchhhHHHHHHHHHHHHH
Confidence            999988855332222222222222223334444444444444332211   11111233466677999999999999988


Q ss_pred             H-HHHHHHHHHHHHHh------------hhChhhHHHHHHHHHHHHHHHHHHH
Q psy17194        414 L-AYAIGPIVAGGIVD------------AIGFTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       414 l-g~~igp~l~g~l~~------------~~g~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                      + |.+++|.+.|.+.|            ..||+..|++..++.+++.++.+++
T Consensus       396 l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~  448 (467)
T PRK09556        396 LFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV  448 (467)
T ss_pred             HHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence            7 77999999999999            6789999998877777766655544

>PRK11663 regulatory protein UhpC; Provisional

Probab=100.00  E-value=1.1e-32  Score=310.50  Aligned_cols=383  Identities=16%  Similarity=0.151  Sum_probs=289.5

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      ++......++..++.+++...+.+.+|.+.+++|.                           |+.+.|++.+.+.+++.+
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~~   73 (434)
T PRK11663         21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGL---------------------------SRSDIGLLATLFYITYGV   73 (434)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34555666777777788887888999999999866                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      ++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|++.|...+...+++.+++ |+++|+++++++
T Consensus        74 ~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~-~~~~rg~~~~~~  152 (434)
T PRK11663         74 SKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWY-SRTERGGWWAIW  152 (434)
T ss_pred             HHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhC-CHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999997 678999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC----------C--CC-CCcccchh
Q psy17194        201 LAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK----------K--PE-SHSTVPIW  267 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~----------~--~~-~~~~~~~~  267 (871)
                      +.+.++|..+++.+++++.+.+|||+.|++.+++.++..++..+..+|.+++....          +  ++ ++...+.+
T Consensus       153 ~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (434)
T PRK11663        153 NTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRK  232 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChh
Confidence            99999999999999999999999999999988887766555555566554321000          0  00 00011111


Q ss_pred             -----hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc--Cchh
Q psy17194        268 -----KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--PTYQ  340 (871)
Q Consensus       268 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~~~  340 (871)
                           ..++++.++......++.......+..++|.|+.+++|.+..+.+...+.+.++..++.++.|+++||+  ++|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~  312 (434)
T PRK11663        233 EILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRG  312 (434)
T ss_pred             hhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc
Confidence                 255678888777766666667777788999999888899999999999999999999999999999998  3333


Q ss_pred             HHH-H-HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHH
Q psy17194        341 WLM-V-AVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAI  418 (871)
Q Consensus       341 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~i  418 (871)
                      ... . ..+.....+...... ..+......  ++.++|.....+ .........+..++++||++.|+.++..++|.++
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~  388 (434)
T PRK11663        313 PMNLIFAAGILLSVGSLWLMP-FASYVMQAA--CFFTIGFFVFGP-QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAAL  388 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHcc-cccHHHHHH--HHHHHHHHHhhH-HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHH
Confidence            221 1 112222222222222 222222222  222333222111 1111222345556789999999999999999999


Q ss_pred             HHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        419 GPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       419 gp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      +|.+.|++.|+.||+..|++.+++.++..+..+...+
T Consensus       389 ~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  425 (434)
T PRK11663        389 SGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN  425 (434)
T ss_pred             hcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999988887777665554443

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=100.00  E-value=1.5e-32  Score=306.62  Aligned_cols=372  Identities=13%  Similarity=0.125  Sum_probs=284.3

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      .+|+.+..+++.+++++++...+....|.+.+++|.                           +..+.|++.+++.+++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~---------------------------s~~~~g~~~s~~~~~~~   57 (412)
T TIGR02332         5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL---------------------------SATMFGLAATLFYAAYV   57 (412)
T ss_pred             ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            456778888889999999999999999988888866                           89999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      +++++.|+++||+|||+++..++++++++.+++++++|++.+++.|+++|++.+...+...+++.|++ |+++|++++++
T Consensus        58 ~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~rg~~~~~  136 (412)
T TIGR02332        58 ICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF-PAYFRARANAL  136 (412)
T ss_pred             HHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999997 67899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHh------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc-----c----------CC-
Q psy17194        200 ALAFISFGCLVAPPFGGALYQ------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN-----Q----------KK-  257 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~-----~----------~~-  257 (871)
                      ++.+.++|.++++++++++.+      ..|||+.|++.+++.++..++.+++.||+|++.+     +          +. 
T Consensus       137 ~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~  216 (412)
T TIGR02332       137 FMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQL  216 (412)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccc
Confidence            999999999999999998874      3699999999998888777777777777653211     0          00 


Q ss_pred             ----CC---CCcc---cchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCchhHHHHHHhhHHhHHHHH
Q psy17194        258 ----PE---SHST---VPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN-LTTDNWKIGMIWLPAFFPHVFGV  326 (871)
Q Consensus       258 ----~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~s~~~~g~~~~~~~~~~~~~~  326 (871)
                          .+   ++..   ...++.++++.++......++.......+..++|.++++. .+.+..+.+.......++.+++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~  296 (412)
T TIGR02332       217 TLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM  296 (412)
T ss_pred             cccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH
Confidence                00   0000   0111223356777777777777777788889999999773 46778888988889999999999


Q ss_pred             HHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHH
Q psy17194        327 VITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYA  406 (871)
Q Consensus       327 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~g  406 (871)
                      ++.|+++||+++|+... .....+..++..+.....+....+...++.++|....   .........+.+|+++|++++|
T Consensus       297 l~~g~l~dr~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~a~g  372 (412)
T TIGR02332       297 IWWSRHSDRLKERKHHT-ALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSA---MAIFWTTPDQSISLQARAIAIA  372 (412)
T ss_pred             HHHHHHhcccCccHHHH-HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhh---hhHHHhhcccccchHHHHHHHH
Confidence            99999999999776432 2222222333222222222222222222223332221   1111122223457789999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHH
Q psy17194        407 IADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMN  443 (871)
Q Consensus       407 i~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~  443 (871)
                      +.+...++|.+++|.+.|.+.|..| |++.+++.+++.
T Consensus       373 ~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       373 VINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL  410 (412)
T ss_pred             HHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence            9999999999999999999999886 999988776543

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=100.00  E-value=3.7e-32  Score=310.90  Aligned_cols=357  Identities=21%  Similarity=0.158  Sum_probs=293.6

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      ++..+..++++.++..++.+++...+|.+.+++|.                           +..+.+|+.+.+.++..+
T Consensus         4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~---------------------------s~~~~~~~~~~~~l~~~~   56 (495)
T PRK14995          4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA---------------------------SGNELLWIIDIYSLVMAG   56 (495)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHhHHHHHHHHHHHHHHH
Confidence            46678889999999999999999999999999876                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +.+++|+++||+|||++++++.++++++++++++++|++.++++|+++|++.+...+...+.+.+.++|+++|++++|++
T Consensus        57 ~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~  136 (495)
T PRK14995         57 MVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVW  136 (495)
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999988888877776778999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC---------------------
Q psy17194        201 LAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE---------------------  259 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~---------------------  259 (871)
                      .....+|..+||.+++++.+++|||+.|++...++++..++..++.|+.+++.+++.+.                     
T Consensus       137 ~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~  216 (495)
T PRK14995        137 AAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL  216 (495)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999998888887777777776644321111100                     


Q ss_pred             -----------------------------CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchh
Q psy17194        260 -----------------------------SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK  310 (871)
Q Consensus       260 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  310 (871)
                                                   .+.+.-..+++|+|.+.......++..........++|.|++..+|.++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~  296 (495)
T PRK14995        217 KGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLE  296 (495)
T ss_pred             ccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence                                         001111235778888777777777766677777788899999999999999


Q ss_pred             HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc---chhhHHHHHHHHHHHHHHhhhhhhhhh
Q psy17194        311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF---STSYQMLMLPICGICFGMALVDTALLP  387 (871)
Q Consensus       311 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~l~g~g~~~~~~~~~~  387 (871)
                      +|.......++..++.++.|++.||+|+|+.+  ..+..+..++.+.+..   .++.+..+...++.|+|.+...+....
T Consensus       297 ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~  374 (495)
T PRK14995        297 AGMFMLPVMVASGFSGPIAGILVSRLGLRLVA--TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTS  374 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999988754  5555555555443322   234455556677778888876333333


Q ss_pred             hhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        388 TLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  429 (871)
Q Consensus       388 ~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~  429 (871)
                         ...+..|+++++.+.++.++..++|..+|+.+.|.+.++
T Consensus       375 ---~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~  413 (495)
T PRK14995        375 ---AIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR  413 (495)
T ss_pred             ---HHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               334445779999999999999999999999999998764

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=100.00  E-value=9.9e-32  Score=301.20  Aligned_cols=380  Identities=15%  Similarity=0.086  Sum_probs=290.4

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      ++|..+.+.++..+++.++.....+..|.+.+++|.                           ++.+.|++.+.+.++..
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~   64 (406)
T PRK11551         12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL---------------------------DVAQMGWAFSAGILGLL   64 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            456677777788889999999999999999999866                           88999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      ++.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++
T Consensus        65 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~  143 (406)
T PRK11551         65 PGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAV-GPRLRGTAVSL  143 (406)
T ss_pred             HHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999987 66899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcc---hhHH
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD---PYIA  276 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  276 (871)
                      .+....+|..+++.+++.+.+..+||+.|++.+++.++..++..++.||.++..+++.+++.........+++   +..+
T Consensus       144 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (406)
T PRK11551        144 MYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATL  223 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHH
Confidence            9999999999999999998888899999999887777666666666676554322211111111111222322   2233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q psy17194        277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF  356 (871)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~  356 (871)
                      ......+...........+.|.++++ .|.+..+.+...+...++.+++.++.|++.||+|+|+.+  ..+.....++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--~~~~~~~~~~~~  300 (406)
T PRK11551        224 LLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV--LLIYAGILASLA  300 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHH
Confidence            33333333344455566778888776 699999999999999999999999999999999988855  334444445555


Q ss_pred             HhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhH
Q psy17194        357 IIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTAL  435 (871)
Q Consensus       357 ~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~  435 (871)
                      .....++.+.+.+..++.+++.+...+.....   ..+..|+++|+++.|+.+....+|..++|.+.|.+.++.+ +...
T Consensus       301 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~  377 (406)
T PRK11551        301 ALAAAPSFAGMLLAGFAAGLFVVGGQSVLYAL---APLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGV  377 (406)
T ss_pred             HHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHH---HHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHH
Confidence            55555565555555555565554443333333   3344567999999999999999999999999999998754 5556


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q psy17194        436 NFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~~  453 (871)
                      ++....+.++..++.+..
T Consensus       378 ~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        378 IGASIPVILVAALAALLL  395 (406)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            666555555554444433

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=100.00  E-value=2e-31  Score=304.65  Aligned_cols=384  Identities=14%  Similarity=0.121  Sum_probs=271.7

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCch--hHHHH--HHHHHHHHH
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGED--SATGV--LFASKAIVQ  118 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~--~~s~~~l~~  118 (871)
                      +.+...+++.++++++...+....|.+.+++..                         +.++  ...+.  +.++..+++
T Consensus        16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~l~~   70 (490)
T PRK10642         16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFP-------------------------GADPSVQMIAALATFSVPFLIR   70 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-------------------------CCCcHHHHHHHHHHHHHHHHHH
Confidence            456677889999999999999999999888753                         1122  12222  357888999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHH--------HHHHHHHHHhhhhhhhhhHHHHhhcccCCh
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGV--------LFFARSLQGVGSAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~--------l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~  190 (871)
                      .++++++|+++||+|||+++.+++++++++++++++++|++.        ++++|+++|++.|..++...++++|++ |+
T Consensus        71 ~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~-p~  149 (490)
T PRK10642         71 PLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS-PD  149 (490)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC-CC
Confidence            999999999999999999999999999999999999999875        889999999999999999999999997 66


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHh--------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc----CC-
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALYQ--------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ----KK-  257 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~--------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~----~~-  257 (871)
                      ++|+++.++...+..+|..+|+.+...+..        .+|||++|++.+++.++ .++.....||+++..+.    ++ 
T Consensus       150 ~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~  228 (490)
T PRK10642        150 RKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQG  228 (490)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhh
Confidence            899999999999988998888877655432        57999999997766554 33344556665432110    00 


Q ss_pred             CC----CCcccchhhhhcc-hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHH
Q psy17194        258 PE----SHSTVPIWKLFMD-PY-IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVK  331 (871)
Q Consensus       258 ~~----~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~  331 (871)
                      ++    +....+.++++++ +. +.......++....++....++|.|+++.+|.+..+.++......++..++.++.|+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~  308 (490)
T PRK10642        229 DREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGL  308 (490)
T ss_pred             ccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            00    0112234455543 22 222223333445566677789999998888998888887777788889999999999


Q ss_pred             HHhhcCchhHHHHHHHHHHHH---HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHH
Q psy17194        332 LAKLYPTYQWLMVAVGLVLEG---LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA  408 (871)
Q Consensus       332 l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~  408 (871)
                      ++||+|||+.+  ..+..+..   +..+......+...+++.+++.+++.+...+......   .+.+|++.||++.|+.
T Consensus       309 l~dr~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~---~~~~p~~~Rg~~~g~~  383 (490)
T PRK10642        309 LSDRFGRRPFV--ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTL---PAMFPTHIRYSALAAA  383 (490)
T ss_pred             HHHHhccHHHH--HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHCCCccchHHHHHH
Confidence            99999999855  33332222   1112222233445555556666665554433333332   2346779999999986


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHHHHhhccc
Q psy17194        409 DISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYLKNIYD  458 (871)
Q Consensus       409 ~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~  458 (871)
                      +....+++.++|.+.+++.+..+ |+..+++..+..++.++..++.++.++
T Consensus       384 ~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~  434 (490)
T PRK10642        384 FNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETAN  434 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccC
Confidence            66667778899999999988765 666666655555555555555555443

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=100.00  E-value=5.6e-31  Score=292.17  Aligned_cols=365  Identities=15%  Similarity=0.124  Sum_probs=279.0

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      |+.+..+.++.+..........+.+|.+.+++|.                           ++++.|+..+++.++..++
T Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~~~   71 (394)
T PRK10213         19 WSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI---------------------------SEGVAGQSVTVTAFVAMFA   71 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHH
Confidence            4444444444444444454666788999999866                           8999999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL  201 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~  201 (871)
                      +++.|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++..
T Consensus        72 ~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~~~~a~~~~~  150 (394)
T PRK10213         72 SLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLV-PPRTVPKALSVIF  150 (394)
T ss_pred             HHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHc-CHhHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999999997 6789999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHH
Q psy17194        202 AFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  281 (871)
Q Consensus       202 ~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (871)
                      .+.++|.++||++++.+.+.+|||+.|++.++++++..+......|+.++   ++   ++...+.++.+|+|.++...+.
T Consensus       151 ~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~---~~---~~~~~~~~~~l~~~~~~~~~~~  224 (394)
T PRK10213        151 GAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG---EP---SHQKQNTFRLLQRPGVMAGMIA  224 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc---cc---ccchhHHHHHhcCHHHHHHHHH
Confidence            99999999999999999999999999999887777655444444444321   11   1122234677888888776665


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS  361 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (871)
                      .++..........+.++++.+++|+++.+.+.......++.+++.++.+++.||.++ +.+ +...........++....
T Consensus       225 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l-~~~~~~~~~~~~~l~~~~  302 (394)
T PRK10213        225 IFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LAL-AGAPLVLAVSALVLTLWG  302 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHH-HHHHHHHHHHHHHHHHHh
Confidence            555555555555565444456679999999999999999999999999999999643 322 122233233333433344


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHH
Q psy17194        362 TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  441 (871)
Q Consensus       362 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~  441 (871)
                      ++.+.+.+..++.|++.+...+.........   . +++++++.++.....++|..+||.++|.+.|..|++..++..++
T Consensus       303 ~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~  378 (394)
T PRK10213        303 SDKIVATGVAIIWGLTFALVPVGWSTWITRS---L-ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGT  378 (394)
T ss_pred             hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHH---C-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHH
Confidence            5666666677777888877644444443332   2 25567778888888899999999999999999999888888766


Q ss_pred             HHHHH
Q psy17194        442 MNILY  446 (871)
Q Consensus       442 ~~~~~  446 (871)
                      +.++.
T Consensus       379 ~~~~~  383 (394)
T PRK10213        379 LMLLT  383 (394)
T ss_pred             HHHHH
Confidence            55444

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=100.00  E-value=2.4e-31  Score=295.38  Aligned_cols=365  Identities=14%  Similarity=0.089  Sum_probs=276.3

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ...++++.+.... .....+++|.+.+++|.                           |..+.|++.+++.+++.+++++
T Consensus        12 ~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~---------------------------s~~~~g~~~s~~~~~~~l~~~~   63 (393)
T PRK09705         12 LVLVLIGLNMRPL-LTSVGPLLPQLRQASGM---------------------------SFSVAALLTALPVVTMGGLALA   63 (393)
T ss_pred             HHHHHHHHHcchh-hhccchhHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHhhh
Confidence            3344444443322 35667999999999876                           8999999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHH
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFI  204 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~  204 (871)
                      .|+++||+|||+++..+.++++++.+++++++|++.++++|+++|++.+...+...+++.+++ | ++|+++++++..+.
T Consensus        64 ~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~-~-~~~~~~~g~~~~~~  141 (393)
T PRK09705         64 GSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRF-Q-QRTPLVMGLWSAAL  141 (393)
T ss_pred             hHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHc-c-ccchhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999986 5 68999999999999


Q ss_pred             HHHHHHhHHHHHHHHhhh-CChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHH
Q psy17194        205 SFGCLVAPPFGGALYQFA-GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL  283 (871)
Q Consensus       205 ~~G~~lg~~l~~~l~~~~-gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (871)
                      .+|..+|+.+++++.++. +||+.+.+.++..++..+..+...++.+++   ++++   .....+.++++..+......+
T Consensus       142 ~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~l~~~~~~~l~~~~~  215 (393)
T PRK09705        142 MGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVAS---SHKT---TTTPVRVVFTPRAWTLGVYFG  215 (393)
T ss_pred             HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCC---CcCCcccccCHhHHHHHHHHH
Confidence            999999999999998875 899988776666554333332222222111   1111   112345567777777766666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc-ch
Q psy17194        284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF-ST  362 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~  362 (871)
                      +....+.....+.|.|+++ +|.+..+.+...+.+.++.+++.++.+++.||+++|+..  ..+..+..++...... ..
T Consensus       216 ~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~--~~~~~l~~~~~~~~~~~~~  292 (393)
T PRK09705        216 LINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL--MLALVLQLVGFCGFIWLPL  292 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH--HHHHHHHHHHHHHHHHccc
Confidence            6677777888899999876 799999999999999999999999999999999998855  4444444444443322 22


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIA  440 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~-~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~  440 (871)
                      +.....  .++.+++.+...+...   ....+.. +++++|+.+++.+....++..++|.+.|++.|..| |...|++..
T Consensus       293 ~~~~~~--~~l~g~g~g~~~~~~~---~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~  367 (393)
T PRK09705        293 QLPVLW--AMVCGLGLGGAFPLCL---LLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHA  367 (393)
T ss_pred             hHHHHH--HHHHHHhccchHHHHH---HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHH
Confidence            222222  2344566555433222   2233333 35788999999999999999999999999999987 777777777


Q ss_pred             HHHHHHHHHHHHH
Q psy17194        441 FMNILYAPVLIYL  453 (871)
Q Consensus       441 ~~~~~~~~~~~~~  453 (871)
                      +++++..++....
T Consensus       368 ~~~~~~~~~~~~~  380 (393)
T PRK09705        368 LCVVGLMIITLRF  380 (393)
T ss_pred             HHHHHHHHHHHHh
Confidence            6666555544433

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=100.00  E-value=2.3e-31  Score=297.91  Aligned_cols=374  Identities=17%  Similarity=0.175  Sum_probs=290.9

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .+.....+.+..++..+....+.|.+|.+.+++|.                           ++.+.++..+.+.+++.+
T Consensus        11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~~~~~~~~~~~~~~   63 (406)
T PRK15402         11 ALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA---------------------------GAEWVPTSMTAYLAGGMF   63 (406)
T ss_pred             HHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34556666777777888888899999999999866                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|.+++++.
T Consensus        64 ~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~  142 (406)
T PRK15402         64 LQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESF-EEADAIKITALM  142 (406)
T ss_pred             HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHh-ChhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998888999999987 668899999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHH
Q psy17194        201 LAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  280 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (871)
                      .....+|..+||.+++.+.++.+||+.|++.+++.++..+..++..||.+++.+++.+.++...+.++++++|.++....
T Consensus       143 ~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (406)
T PRK15402        143 ANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGAL  222 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHH
Confidence            99999999999999999999899999999988888877666666565543221111111112234566788998887776


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      ..++............|.++.+.+|.++.+.++......++.+++.++.+++.||+++|+..  ..+..+..++.+....
T Consensus       223 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~--~~~~~~~~~g~~~~~~  300 (406)
T PRK15402        223 ALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI--RMGLWPMVAGLLLAAL  300 (406)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHHHHHHHH
Confidence            66666555555666678888888899999999888777888899999999999999988854  4455444444444332


Q ss_pred             -----chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        361 -----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       361 -----~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                           ..+.+.+++..++.+++.+...+......    ...+++++|++.++.+....++..+|+.+.+.+.+..++...
T Consensus       301 ~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~  376 (406)
T PRK15402        301 ATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT----LFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLF  376 (406)
T ss_pred             HHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH----hhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHH
Confidence                 22344455666777887776533332222    112347899999999999999999999999999998886665


Q ss_pred             HHHHHHHHHHHHH
Q psy17194        436 NFLIAFMNILYAP  448 (871)
Q Consensus       436 f~~~~~~~~~~~~  448 (871)
                      .+..++..++.+.
T Consensus       377 ~~~~~~~~~~~~~  389 (406)
T PRK15402        377 NLFNLANGLLWLL  389 (406)
T ss_pred             HHHHHHHHHHHHH
Confidence            5554444444433

>PRK03699 putative transporter; Provisional

Probab=100.00  E-value=2.9e-31  Score=295.48  Aligned_cols=377  Identities=14%  Similarity=0.094  Sum_probs=289.1

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      |++.....++++++.........+++|.+.+++|.                           |..+.+++.+.+.+++.+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~---------------------------s~~~~g~~~s~~~~~~~i   57 (394)
T PRK03699          5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL---------------------------PVSSMSNTFTFLNAGILI   57 (394)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            44556677788888888888899999999999866                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      ++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++ |+++|+++++..
T Consensus        58 ~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~  136 (394)
T PRK03699         58 SIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY-EGKQRGSRLLFT  136 (394)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc-ccchHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999888899999987 667899999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHh-hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHH
Q psy17194        201 LAFISFGCLVAPPFGGALYQ-FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCS  279 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~-~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (871)
                      +....+|..++|.+.+.+.. ..|||++|++.+++.++..++.++.  +.|+..++++++  .....++ ..++.++...
T Consensus       137 ~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~--~~~~~~~-~~~~~~~~~~  211 (394)
T PRK03699        137 DSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFS--EFPALGKHAPKA--DKPVAKE-KWGIGVLFLA  211 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhc--CCccccccCccc--cCccccc-cCChHHHHHH
Confidence            99999999999999888764 5799999999888777655444332  212111111111  1111111 2245556555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      ...++.......+..+.|.|+++.+|.+..+.+.+.+.+.++..++.++.++++||+++|+.+  .....+..+..++..
T Consensus       212 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l--~~~~~~~~~~~~~~~  289 (394)
T PRK03699        212 IAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL--TVLAGLALVLMYLFV  289 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH--HHHHHHHHHHHHHHH
Confidence            556666666677788999999998999999999999999999999999999999999999865  333334444444444


Q ss_pred             cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH
Q psy17194        360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  439 (871)
Q Consensus       360 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~  439 (871)
                      ..++.+...+..++.|++.+...+.......   + ..++.+++..+.......+|..++|.+.|++.|..|++..+++.
T Consensus       290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~  365 (394)
T PRK03699        290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGS---Q-QTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTA  365 (394)
T ss_pred             HcCCchHHHHHHHHHHHHHHHHHHHHHHHHH---H-HccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhh
Confidence            4555555555555666665554333332222   2 22345677788888889999999999999999999999999988


Q ss_pred             HHHHHHHHHHHHHHhhc
Q psy17194        440 AFMNILYAPVLIYLKNI  456 (871)
Q Consensus       440 ~~~~~~~~~~~~~~~~~  456 (871)
                      +++.+++.++.....+.
T Consensus       366 ~~~~~~~~~~~~~~~~~  382 (394)
T PRK03699        366 NGLYAVVFVMCILLGFV  382 (394)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            87777766555555443

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=100.00  E-value=1.2e-31  Score=297.45  Aligned_cols=358  Identities=15%  Similarity=0.174  Sum_probs=279.5

Q ss_pred             HHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhC
Q psy17194         54 LDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIG  133 (871)
Q Consensus        54 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G  133 (871)
                      +.........+++|.+.+++|.                           +..+.|++.+++.+++.+++++.|+++||+|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G   66 (377)
T TIGR00890        14 FTSGYVYTWTLLAPPLGRYFGV---------------------------GVTAVAIWFTLLLIGLAMSMPVGGLLADKFG   66 (377)
T ss_pred             HHhhHHhhhhhHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcC
Confidence            3333455677889999999866                           8999999999999999999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHH
Q psy17194        134 YDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPP  213 (871)
Q Consensus       134 rr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~  213 (871)
                      ||+++..+.++.+++.+++++++|++.+++.|++.|++.+..++.....+.+++ | ++|++++++...+.++|..++++
T Consensus        67 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~  144 (377)
T TIGR00890        67 PRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWF-P-DKRGLASGIIIGGYGLGSFILSP  144 (377)
T ss_pred             ccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHc-C-cccHHHHHHHHHhcchhHhHHHH
Confidence            999999999999999999999999999999999999999988888888899986 5 58999999999999999988777


Q ss_pred             HHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC-CCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy17194        214 FGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK-PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFL  292 (871)
Q Consensus       214 l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (871)
                      +.+.+.+..|||+.|++.+++.++..+..+++.++++++.++++ +.++.....++.+|++.++......++........
T Consensus       145 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (377)
T TIGR00890       145 LITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLL  224 (377)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHH
Confidence            77777777899999999999888877777766655443221111 11112234567788888877666666555555555


Q ss_pred             HHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhH--HHHHH
Q psy17194        293 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQ--MLMLP  370 (871)
Q Consensus       293 ~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~  370 (871)
                      ..+.+.|.+ +++.+..+.+...+...++..++.++.+++.||++||+.+  ..+..+..++.+...+.++..  ..+..
T Consensus       225 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (377)
T TIGR00890       225 IGLYKPYGQ-SLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM--SIVFGISAVGMAAMLFIPMLNDVLFLAT  301 (377)
T ss_pred             HHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence            566666654 4788888889999999999999999999999999998855  555555556555555444322  22333


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILY  446 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~  446 (871)
                      .++.+++.+...+.....   ..+..|+++|+++.|+.+....+|..++|.+.|.+.+..||++.|.+.+++.+++
T Consensus       302 ~~~~g~~~g~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~  374 (377)
T TIGR00890       302 VALVFFTWGGTISLFPSL---VSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS  374 (377)
T ss_pred             HHHHHHHhccchhccHHH---HHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence            445555555543333333   3344566899999999999999999999999999999999999999887766654

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=100.00  E-value=1.5e-31  Score=302.31  Aligned_cols=378  Identities=18%  Similarity=0.168  Sum_probs=289.1

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      +|.++...++...........+...+|.+.+++|.                           +..+.+++.+.+.++..+
T Consensus        17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~---------------------------s~~~~~~~~s~~~~~~~~   69 (455)
T TIGR00892        17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA---------------------------TYSETAWISSIMLAVLYA   69 (455)
T ss_pred             chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc---------------------------chhHHHHHHHHHHHHHHH
Confidence            35455555555544444445566778889888866                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFF-ARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~-~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      +.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|+++|++.+...+...+++.+++ + ++|++++++
T Consensus        70 ~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~-~-~~r~~a~g~  147 (455)
T TIGR00892        70 GGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYF-Y-RRRPLANGL  147 (455)
T ss_pred             hhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHH-H-hhHHHHHHH
Confidence            9999999999999999999999999999999999999998875 579999999987677788889987 5 689999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhh---hcc--C----C-CCCC--------
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ---LNQ--K----K-PESH--------  261 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~---~~~--~----~-~~~~--------  261 (871)
                      .+.+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..++.++.   ..+  +    . ..++        
T Consensus       148 ~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (455)
T TIGR00892       148 AMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAE  227 (455)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhh
Confidence            99999999999999999999999999999999988877665555544432210   000  0    0 0000        


Q ss_pred             cccc--hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc--C
Q psy17194        262 STVP--IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--P  337 (871)
Q Consensus       262 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g  337 (871)
                      ...+  ..+++++|.++......++..........+++.|+++ +|.+..+.+++.+...++.++++++.+++.||.  +
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~  306 (455)
T TIGR00892       228 KINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIR  306 (455)
T ss_pred             hhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence            0001  1256788888887777777777777777788888865 699999999999999999999999999999974  3


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHH
Q psy17194        338 TYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA  417 (871)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~  417 (871)
                      +++...+..+..+.+++.+++...++.+.+++..++.|++.+...+...+...   +..+++++++++|+++...++|.+
T Consensus       307 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~---~~~~~~~~g~~~g~~~~~~~lg~~  383 (455)
T TIGR00892       307 PHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLM---DLVGAQRFSSAVGLVTIVECCAVL  383 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHH---HHhhHHHHhhHHhHHHHHHHHHHH
Confidence            34433333344444455555556667777777788888888776444444433   344568999999999999999999


Q ss_pred             HHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHH
Q psy17194        418 IGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       418 igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~  451 (871)
                      +||.++|.+.+..| |++.|++.+++.+++.+...
T Consensus       384 igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~  418 (455)
T TIGR00892       384 IGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLA  418 (455)
T ss_pred             ccccceeeeehhcCCcchHHHHhhHHHHHHHHHHH
Confidence            99999999999885 99999988877666554333

>PRK10504 putative transporter; Provisional

Probab=100.00  E-value=7.4e-31  Score=299.92  Aligned_cols=358  Identities=17%  Similarity=0.210  Sum_probs=285.0

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      +.++.++++.++..++.+.+.+.+|.+.+++|.                           ++.+.|++.+.+.++..++.
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------------------------s~~~~~~~~~~~~~~~~~~~   62 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE---------------------------SPLHMHMVIVSYVLTVAVML   62 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc---------------------------CHHHHHHHHHHHHHHHHHHH
Confidence            345677888888999999999999999999876                           88999999999999999999


Q ss_pred             hhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHH
Q psy17194        123 PFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA  202 (871)
Q Consensus       123 ~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~  202 (871)
                      +++|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++...
T Consensus        63 ~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  141 (471)
T PRK10504         63 PASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIV-PREQYMAAMTFVTL  141 (471)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc-CHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999986 77899999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC--------------------CC----
Q psy17194        203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK--------------------KP----  258 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~--------------------~~----  258 (871)
                      ..++|..+||.+++.+.++.|||+.|++.....++..+......|+.+++.++.                    +.    
T Consensus       142 ~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (471)
T PRK10504        142 PGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLG  221 (471)
T ss_pred             HHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCC
Confidence            999999999999999999999999999988877776666666555432211100                    00    


Q ss_pred             -------------------------CCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHH
Q psy17194        259 -------------------------ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGM  313 (871)
Q Consensus       259 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~  313 (871)
                                               +.+++....+++|||.+.......++..........+.|.|++..+|.++.+.++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  301 (471)
T PRK10504        222 LSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGL  301 (471)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence                                     0001111235788898888887777777777777778888888888999999999


Q ss_pred             HHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc---hhhHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy17194        314 IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS---TSYQMLMLPICGICFGMALVDTALLPTLG  390 (871)
Q Consensus       314 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~l~g~g~~~~~~~~~~~~~  390 (871)
                      ......++..++.++.+++.||+|+|+.+  ..+..+.++...++.+.   .+.+...+..++.|++.+...+...... 
T Consensus       302 ~~~~~~~~~~~~~~~~~~l~~r~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-  378 (471)
T PRK10504        302 MMIPMVLGSMGMKRIVVQVVNRFGYRRVL--VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLT-  378 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCchHHH--HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            99888888888889999999999998865  44555444444433332   2233333344556666666544433333 


Q ss_pred             hhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        391 YLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       391 ~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                        .+..|++.+|.++++.++...+|..+|+.+.|.+.+..|+.
T Consensus       379 --~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~  419 (471)
T PRK10504        379 --LKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ  419 (471)
T ss_pred             --HHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence              33456689999999999999999999999999999987764

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=100.00  E-value=3.5e-31  Score=289.21  Aligned_cols=357  Identities=12%  Similarity=0.088  Sum_probs=261.2

Q ss_pred             HHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCC
Q psy17194         55 DNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGY  134 (871)
Q Consensus        55 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr  134 (871)
                      +.+....+.|++|.+.+|+|.                           |+.+.|++.+.+.+++.+++++.|+++||+||
T Consensus         3 ~~~~~~~~~~~lp~i~~~~~~---------------------------s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~gr   55 (368)
T TIGR00903         3 SQAIWVTFSPVLSLVAEDIDV---------------------------SKEELGLLAITYPAAFLALTIPSGLLLDRAFK   55 (368)
T ss_pred             hhHHHHHHHhhHHHHHHHhCc---------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            344556678999999999876                           88999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHH
Q psy17194        135 DLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPF  214 (871)
Q Consensus       135 r~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l  214 (871)
                      |+++..+.+....+.+....++|++.+++.|+++|++.+.. +.....++|++ |+++|++++++.+.+..+|.++++++
T Consensus        56 r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~-~~~~r~~a~~~~~~~~~lG~~l~~~~  133 (368)
T TIGR00903        56 RWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFL-LNAFAPAASQI-REERRDLVISLLSFAMYLGIIFALAA  133 (368)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99877666555554433333479999999999999999964 55566678987 67899999999999999999999999


Q ss_pred             HHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHH
Q psy17194        215 GGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEP  294 (871)
Q Consensus       215 ~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (871)
                      ++++.+.+|||+.|++.++++++..++.++..||.|+..++..+.++...+.++++|+|.++.+....++.......+..
T Consensus       134 ~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~  213 (368)
T TIGR00903       134 GLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAI  213 (368)
T ss_pred             HHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999888888888888876543221111011112466789999999999999998889999999


Q ss_pred             HHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCch---hHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q psy17194        295 TISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY---QWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPI  371 (871)
Q Consensus       295 ~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  371 (871)
                      ++|.|+++ .|.+.. .+.......+...++   .++++||..||   +.. ......+.++.....+...+....+...
T Consensus       214 wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~  287 (368)
T TIGR00903       214 WLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIY-IRAAALLIAAFFLALAFELNRLALFAFI  287 (368)
T ss_pred             HHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHH-HHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence            99999966 577754 455544444444444   56777776543   322 2222333334443444444433333333


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      .+.+++....   .........+.+|++.||++.|+.+...++++.++|++.+.+..  |.+..|.+.++..++..+...
T Consensus       288 ~l~~~~~~~~---~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~  362 (368)
T TIGR00903       288 GIAGLLMLPA---YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL  362 (368)
T ss_pred             HHHHHhhhhh---HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence            3334433333   22233445566788999999999999999999999999998874  777888888777776665543

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=100.00  E-value=3.2e-31  Score=301.08  Aligned_cols=379  Identities=11%  Similarity=0.034  Sum_probs=275.9

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      ++.+...+...++.........|.+|.+.+++|.                           +..+.|++.+.+.+++.++
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl---------------------------s~~~~g~~~~~~~~~~~~~   87 (476)
T PLN00028         35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL---------------------------TKSDIGNAGIASVSGSIFS   87 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHH
Confidence            3455556666677777777788899999999876                           8899999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL  201 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~  201 (871)
                      .++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+... ....++++++ |+++|++++|+..
T Consensus        88 ~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~-~~~~rg~a~g~~~  165 (476)
T PLN00028         88 RLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMF-NGKIVGTANGIAA  165 (476)
T ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhc-ChhheeHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999988654 4567889987 6689999999998


Q ss_pred             HHHHHHHHHhHHHHHHHHh---------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc----CCC-CC-Ccccch
Q psy17194        202 AFISFGCLVAPPFGGALYQ---------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ----KKP-ES-HSTVPI  266 (871)
Q Consensus       202 ~~~~~G~~lg~~l~~~l~~---------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~----~~~-~~-~~~~~~  266 (871)
                      ...++|..+++.+.+.+..         ..|||+.|++.+++.++..++.+++.++.|+...+    +.+ ++ +.....
T Consensus       166 ~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  245 (476)
T PLN00028        166 GWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVL  245 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHH
Confidence            8888888877766655432         24899999999999888777776665544432100    000 00 011223


Q ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCch-----hH
Q psy17194        267 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY-----QW  341 (871)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~  341 (871)
                      ++.+++++++.+.+..++..........++|.|+.+.+|.+..+++.+.+...++.+++.+++|+++||+++|     |.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~  325 (476)
T PLN00028        246 RYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRL  325 (476)
T ss_pred             HHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhH
Confidence            4556778877766665555555556677889998888999999999999999999999999999999999865     22


Q ss_pred             HHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q psy17194        342 LMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  421 (871)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~  421 (871)
                      ........+.++..+......+.+...+..++.+++.+...+...+...    ...++.+|++.|+.+....+|+.++|.
T Consensus       326 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~g~~~g~~~~~g~lg~~i~~~  401 (476)
T PLN00028        326 WALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVP----FVSRRSLGVISGLTGAGGNVGAVLTQL  401 (476)
T ss_pred             HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCc----ccChhhchhhhhhhhccccHHHHHHHH
Confidence            2223333333343444444555554444455555555444333333322    234578999999988777777777776


Q ss_pred             HHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        422 VAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       422 l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                      +.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus       402 l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~  433 (476)
T PLN00028        402 LFF-TGSSYSTETGISLMGVMIIACTLPVAFIH  433 (476)
T ss_pred             HHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence            654 22234699999999888887777666654

>TIGR00893 2A0114 d-galactonate transporter

Probab=100.00  E-value=4.2e-31  Score=295.18  Aligned_cols=367  Identities=16%  Similarity=0.192  Sum_probs=286.4

Q ss_pred             HHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhh
Q psy17194         53 LLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI  132 (871)
Q Consensus        53 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~  132 (871)
                      ++..++...+.+..|.+.+++|.                           ++.+.|++.+++.++..++.++.|+++||+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~   56 (399)
T TIGR00893         4 VINYLDRANLSFAAPMLQEDLGL---------------------------SAAQYGYVFSAFSWGYVVGQFPGGWLLDRF   56 (399)
T ss_pred             hHHHHHHHhhhHhHHHHHHhhCC---------------------------ChhhHHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence            45566677777888888888766                           889999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhH
Q psy17194        133 GYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAP  212 (871)
Q Consensus       133 Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~  212 (871)
                      |||+++..+.++.+++..+++++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++.+....+|.++++
T Consensus        57 g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~~~  135 (399)
T TIGR00893        57 GARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWF-PASERATAVSIFNSAQGLGGIIGG  135 (399)
T ss_pred             CcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhC-CHHHHHHHHHHHHHhchHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999987 678999999999999999999999


Q ss_pred             HHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC-------------------CCCCCcccchhhhhcch
Q psy17194        213 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK-------------------KPESHSTVPIWKLFMDP  273 (871)
Q Consensus       213 ~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  273 (871)
                      .+++.+.+..+||+.|++.+++.++..++.++..++++++.+..                   ++++......++.+++|
T Consensus       136 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (399)
T TIGR00893       136 PLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDR  215 (399)
T ss_pred             HHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCH
Confidence            99999999999999999998888877776666665544321100                   00011122355778889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhH--HHH----HHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW--LMV----AVG  347 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~----~~~  347 (871)
                      .++......++..........+.|.|+++.+|.+..+.+++.+...++.+++.++.+++.||+++|+.  ...    ..+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  295 (399)
T TIGR00893       216 RVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIA  295 (399)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHH
Confidence            98888888888888888888999999999899999999999999999999999999999999998851  110    111


Q ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      .....+........++.+..+....+.+++.+ ..+   .......+..|+++|++++|+.+....+|..++|.+.|.+.
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~  371 (399)
T TIGR00893       296 GLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGA---IGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIA  371 (399)
T ss_pred             HHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhh---HHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhc
Confidence            11111111122222233333222222233332 322   33333445566799999999999999999999999999999


Q ss_pred             hhhC-hhhHHHHHHHHHHHHHHHHH
Q psy17194        428 DAIG-FTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       428 ~~~g-~~~~f~~~~~~~~~~~~~~~  451 (871)
                      |..| |+..|++.+++.++..+..+
T Consensus       372 ~~~g~~~~~~~~~~~~~~~~~~~~~  396 (399)
T TIGR00893       372 ATTGSFAGALMVVAALALIGALSYL  396 (399)
T ss_pred             cCCCchhHHHHHHHHHHHHHHHHHH
Confidence            9999 99999988877766655443

>PRK10489 enterobactin exporter EntS; Provisional

Probab=100.00  E-value=4.1e-31  Score=296.93  Aligned_cols=369  Identities=13%  Similarity=0.095  Sum_probs=282.1

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      .+.+..++..+......+.+|.+.++++.                           ++.+.|++.+.+.++..+++++.|
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~l~~~~~~~~~G   73 (417)
T PRK10489         21 AVFIARFISIFGLGLLGVAVPVQIQMMTG---------------------------STLQVGLSVTLTGGAMFIGLMVGG   73 (417)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------CHHHHHHHHHHHHHHHHHHHHhhH
Confidence            34455666777777888889999888754                           889999999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFAC-----GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL  201 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~-----a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~  201 (871)
                      +++||+|||+++..+.++.+++.++.+.     .++++.+++.|+++|++.+...++..+++.|++ |+++|++++++..
T Consensus        74 ~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  152 (417)
T PRK10489         74 VLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALV-GRENLMQAGAITM  152 (417)
T ss_pred             HHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhcc-CHHHHHHHHHHHH
Confidence            9999999999999988888877665542     567899999999999999988899899999986 6789999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC-CCcccchhhhhcchhHHHHHH
Q psy17194        202 AFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE-SHSTVPIWKLFMDPYIAVCSG  280 (871)
Q Consensus       202 ~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  280 (871)
                      ...++|..+||.+++.+.+..+|++.|++.++..++..++.+ ..|+.+++.+++++. ++.....+..+++|.++....
T Consensus       153 ~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (417)
T PRK10489        153 LTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIAL  231 (417)
T ss_pred             HHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHH
Confidence            999999999999999999988999999988877766554443 444432221111111 011122345667777665554


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      ..++... ......++|.|+++.+|.++.+.+++.+...++.+++.++.+++.||.++++.+  ..+..+.+++.+.+.+
T Consensus       232 ~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l--~~~~~~~~~~~~~~~~  308 (417)
T PRK10489        232 LGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLM--LLSTLGSFLAVGLFGL  308 (417)
T ss_pred             HHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHH--HHHHHHHHHHHHHHHc
Confidence            4443332 345667888998887899999999999999999999999999999997766644  4555555666666666


Q ss_pred             chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHH
Q psy17194        361 STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIA  440 (871)
Q Consensus       361 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~  440 (871)
                      .++.+..++..++.|++.+...+....   ...+..|++.||+++|+.+....+|..+||.+.|.+.+..|++..++..+
T Consensus       309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~  385 (417)
T PRK10489        309 MPMWILAVLCLALFGYLSAISSLLQYT---LLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASG  385 (417)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHH
Confidence            677666666666677766654332222   23344566889999999999999999999999999999999998888777


Q ss_pred             HHHHHHHHHH
Q psy17194        441 FMNILYAPVL  450 (871)
Q Consensus       441 ~~~~~~~~~~  450 (871)
                      ++.++...+.
T Consensus       386 ~~~~~~~~~~  395 (417)
T PRK10489        386 FGLLIIGVLL  395 (417)
T ss_pred             HHHHHHHHHH
Confidence            6655544443

>PRK10091 MFS transport protein AraJ; Provisional

Probab=100.00  E-value=1.5e-30  Score=288.40  Aligned_cols=369  Identities=14%  Similarity=0.172  Sum_probs=281.6

Q ss_pred             hhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         44 ILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      .+..+.++.+..........+.+|.+.+++|.                           +..+.|++.+++.+++.++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~---------------------------s~~~~g~~~s~~~~~~~~~~~   56 (382)
T PRK10091          4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGI---------------------------SIPAAGHMISYYALGVVVGAP   56 (382)
T ss_pred             hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCC---------------------------CHHHHhHHHHHHHHHHHHHHH
Confidence            35567777788888888889999999999876                           889999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      ++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+...+++.|++ |+++|++++++...+
T Consensus        57 ~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  135 (382)
T PRK10091         57 IIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII-KPGKVTAAVAGMVSG  135 (382)
T ss_pred             HHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC-ChHHhhHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998888889999986 667899999999999


Q ss_pred             HHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHH
Q psy17194        204 ISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL  283 (871)
Q Consensus       204 ~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (871)
                      ..+|..+|+++++++.+.+|||+.|++.+++.++..+..++..|+.+++.      +....+..+.+|++..+......+
T Consensus       136 ~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~  209 (382)
T PRK10091        136 MTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA------KGGLREQFHFLRSPAPWLIFAATM  209 (382)
T ss_pred             HHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc------ccCHHHHHHHhcChHHHHHHHHHH
Confidence            99999999999999999899999999999888776666666666543211      111122345667777666555544


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc-ch
Q psy17194        284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF-ST  362 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-~~  362 (871)
                      +..........+.+.++.+.+|.++.+.++..+...++.+++.++.+++.||+++|+..  ..+..+.+++.++... .+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~--~~~~~~~~i~~~~~~~~~~  287 (382)
T PRK10091        210 FGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA--AVTDFIIVLALLMLFFFGG  287 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH--HHHHHHHHHHHHHHHHHHh
Confidence            44444444455667788877899999999999999999999999999999999988855  4445555555444332 33


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hChhhHHHHHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA-IGFTALNFLIA  440 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~-~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~-~g~~~~f~~~~  440 (871)
                      +.+...+..++.+++.....   .+......+.. +++.++.+  ..+....+|.++||.++|.+.|. .+|++.+.+.+
T Consensus       288 ~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~  362 (382)
T PRK10091        288 MKTASLIFAFICCAGLFALS---APLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAA  362 (382)
T ss_pred             hHHHHHHHHHHHHHHHHhhh---HHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHH
Confidence            44444444444455444332   22222222222 33444544  34677889999999999999996 67999999887


Q ss_pred             HHHHHHHHHHHHH
Q psy17194        441 FMNILYAPVLIYL  453 (871)
Q Consensus       441 ~~~~~~~~~~~~~  453 (871)
                      ++.++...+....
T Consensus       363 ~~~~~~~~~~~~~  375 (382)
T PRK10091        363 LLSFAAMSSLLLY  375 (382)
T ss_pred             HHHHHHHHHHHHH
Confidence            7766655444433

>PRK12307 putative sialic acid transporter; Provisional

Probab=100.00  E-value=9.6e-31  Score=295.22  Aligned_cols=366  Identities=17%  Similarity=0.121  Sum_probs=268.2

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      .+++.+...+++++.+.++.....+.+|.+.+++|.                           ++.+.+++.+++.+++.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------------------s~~~~~~~~~~~~~~~~   67 (426)
T PRK12307         15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL---------------------------TDMEGAFLATAAFIGRP   67 (426)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            345556778888889999999999999999999876                           88999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      +++++.|+++||+|||+++.++.++.+++.++++++++++.++++|+++|++.+...+...+++.|++ |+++|++++++
T Consensus        68 l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~-~~~~r~~~~~~  146 (426)
T PRK12307         68 FGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESW-PKHLKSKASAF  146 (426)
T ss_pred             HHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC-CHhHhhHhhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999987 67899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC--CCCC--Cc-----ccchhhhh
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK--KPES--HS-----TVPIWKLF  270 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~--~~~~--~~-----~~~~~~~~  270 (871)
                      ...+..+|.++++.+.+.+.+.++||+.|++..+..++ .+......|++++..+++  .+.+  +.     ....++.+
T Consensus       147 ~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (426)
T PRK12307        147 LVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLF  225 (426)
T ss_pred             HHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHH
Confidence            99999999999999999998889999999885543332 222222233332211110  0000  00     11345677


Q ss_pred             cchhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        271 MDPYIAVCSGALLM---ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       271 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      +++.++........   .......+..++|.|+++ .|.++.+.+...+...++.+++.++.+++.||+++|+.+  ..+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~--~~~  302 (426)
T PRK12307        226 NRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTF--SIG  302 (426)
T ss_pred             hhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHH
Confidence            77766543332222   222223356678888876 588888899988888999999999999999999998855  444


Q ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHh--hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMA--LVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  425 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~--~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~  425 (871)
                      ..+..+..+......+.....+..++.+++..  ...+...   ..+.+..|++.||+++|+.+....+++.++|.+.|+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~  379 (426)
T PRK12307        303 LLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP---KFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATW  379 (426)
T ss_pred             HHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH---HHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence            44443333333222211112222223333221  1111112   223455677999999999999999999999999999


Q ss_pred             HHhhhChhhHHHHHH
Q psy17194        426 IVDAIGFTALNFLIA  440 (871)
Q Consensus       426 l~~~~g~~~~f~~~~  440 (871)
                      +.+..|+....++..
T Consensus       380 l~~~~g~~~~~~~~~  394 (426)
T PRK12307        380 LGITMGLGAALTFIV  394 (426)
T ss_pred             HHHcccHHHHHHHHH
Confidence            999998766544433

>TIGR00891 2A0112 putative sialic acid transporter

Probab=100.00  E-value=7.3e-31  Score=294.33  Aligned_cols=368  Identities=14%  Similarity=0.112  Sum_probs=275.2

Q ss_pred             ccccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHH
Q psy17194         38 KSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIV  117 (871)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~  117 (871)
                      ++++++.+...+++++.+.++.....++.|.+.+++|.                           ++.+.|++.+++.++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------------------------s~~~~g~~~~~~~~~   59 (405)
T TIGR00891         7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL---------------------------TTVDAASLISAALIS   59 (405)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------ChhhHHHHHHHHHHH
Confidence            34567778888999999999999999999999999876                           889999999999999


Q ss_pred             HHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       118 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      ..+++++.|.++||+|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++ |+++|++++
T Consensus        60 ~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~~~~~~  138 (405)
T TIGR00891        60 RWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW-PKHLRNKAS  138 (405)
T ss_pred             HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC-ChhhhhHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987 668999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhC--ChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhh-----
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQFAG--KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLF-----  270 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~~g--wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  270 (871)
                      ++.+.+..+|..+++.+++.+.+..+  ||+.|++.++..++.. +.....||+++..+++++++......++..     
T Consensus       139 ~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (405)
T TIGR00891       139 GLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHR  217 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchh
Confidence            99999999999999999999988776  9999988766555443 334445554321111110000000000000     


Q ss_pred             ----------------cc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHH
Q psy17194        271 ----------------MD-P-YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL  332 (871)
Q Consensus       271 ----------------~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  332 (871)
                                      ++ + .+........+..........++|.|+.+++|.+..+.+++.+...++.+++.++.+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l  297 (405)
T TIGR00891       218 IANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFL  297 (405)
T ss_pred             hhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                            00 0 11222222233333444556678889988899999999999999999999999999999


Q ss_pred             HhhcCchhHHHHHHHHHHHHH-HHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHH
Q psy17194        333 AKLYPTYQWLMVAVGLVLEGL-CCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS  411 (871)
Q Consensus       333 ~dr~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~  411 (871)
                      .||+|+|+.+  ..+..+..+ .........+.+.+.+..++.++..+...+.....   +.+..|+++||+++|+.+..
T Consensus       298 ~dr~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~~~  372 (405)
T TIGR00891       298 GDWLGRRKAY--VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKH---LGEYFPTDQRAAGLGFTYQL  372 (405)
T ss_pred             HHHhCchhhh--HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHH---HhhhCCcchhHHHhhHHHHH
Confidence            9999998855  333333322 22222233444444444344444443332333333   34455679999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhC-hhhHHHHH
Q psy17194        412 YSLAYAIGPIVAGGIVDAIG-FTALNFLI  439 (871)
Q Consensus       412 ~~lg~~igp~l~g~l~~~~g-~~~~f~~~  439 (871)
                      ..+|..++|++.|.+.|..| |+..+...
T Consensus       373 ~~~g~~~g~~~~g~l~~~~g~~~~~~~~~  401 (405)
T TIGR00891       373 GNLGGALAPIIGALLAQRLDEYGTALASL  401 (405)
T ss_pred             HHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence            99999999999999999999 87766553

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=100.00  E-value=2.1e-30  Score=293.61  Aligned_cols=382  Identities=11%  Similarity=0.028  Sum_probs=274.1

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      |..+...++......++.....+.+|.+.++ |.                           +..+.|++.+++.+++.++
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~---------------------------s~~~~g~~~~~~~i~~~~~   79 (452)
T PRK11273         28 WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF---------------------------SRGDLGFALSGISIAYGFS   79 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC---------------------------CHHHHHHHHHHHHHHHHHH
Confidence            4444444455555555555566777877655 55                           8899999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR----SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~----s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      ++++|+++||+|||++++++.++.+++.+++++++    +++.+++.|++.|++.+...+.....+.+++ |+++|++++
T Consensus        80 ~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~-~~~~r~~~~  158 (452)
T PRK11273         80 KFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGIV  158 (452)
T ss_pred             HhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhC-ChHHHHHHH
Confidence            99999999999999999999999999998888763    7888999999999999998888888899987 668999999


Q ss_pred             HHHHHHHHHHHH-HhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc---cC---C-------CCCCcc
Q psy17194        198 GIALAFISFGCL-VAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN---QK---K-------PESHST  263 (871)
Q Consensus       198 g~~~~~~~~G~~-lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~---~~---~-------~~~~~~  263 (871)
                      ++++.+.++|.. .+|+++..+....|||+.|++.+++.++..++.+++.+|.+++..   ++   .       +++.+.
T Consensus       159 ~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (452)
T PRK11273        159 SVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQE  238 (452)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCC
Confidence            999999999874 456554444444599999999988888777777777776544210   00   0       000000


Q ss_pred             cch-----hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc--
Q psy17194        264 VPI-----WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--  336 (871)
Q Consensus       264 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--  336 (871)
                      .+.     ..++|++.++...+..++..........++|.|+++..|++..+.++....+.++.+++.++.|+++||+  
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~  318 (452)
T PRK11273        239 LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR  318 (452)
T ss_pred             ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence            111     2356788888887777777777777888999999998899988999888888899999999999999998  


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q psy17194        337 PTYQWLMVAVGLVLEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  414 (871)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l  414 (871)
                      +||+...+. ...+..++.+.+..  ..+.+..++..++.+  .....+ .........+..|++.||+++|+.+...++
T Consensus       319 ~r~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~-~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~  394 (452)
T PRK11273        319 GNRGATGVF-FMTLVTIATIVYWLNPAGNPTVDMACMIVIG--FLIYGP-VMLIGLHALELAPKKAAGTAAGFTGLFGYL  394 (452)
T ss_pred             CCcchHHHH-HHHHHHHHHHHHHHhcccChHHHHHHHHHHH--HHHHhH-HHHHHHHHHHHcChhhhhhHHHHHHHHHHH
Confidence            444322111 12222222222211  223333333233333  322111 111122234556779999999999998888


Q ss_pred             HHHH-HHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhc
Q psy17194        415 AYAI-GPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI  456 (871)
Q Consensus       415 g~~i-gp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  456 (871)
                      |+.+ +|.+.|.+.|..||+..|++.+++++++++......+.
T Consensus       395 g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  437 (452)
T PRK11273        395 GGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG  437 (452)
T ss_pred             HHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence            8765 79999999999999999998888777776666655543

>TIGR00900 2A0121 H+ Antiporter protein

Probab=100.00  E-value=1.2e-30  Score=288.12  Aligned_cols=351  Identities=16%  Similarity=0.195  Sum_probs=281.5

Q ss_pred             HHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhH
Q psy17194         48 VSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA  127 (871)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~  127 (871)
                      +.++.++..+......+.+|.+..+++.                           ++.+.|++.+++.++..+++++.|+
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~i~~~~~G~   56 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLAGTG---------------------------SASVLSLAALAGMLPYVVLSPIAGA   56 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhc---------------------------cHHHHHHHHHHHHHHHHHHHHhhhH
Confidence            4566777788888888999999988755                           8899999999999999999999999


Q ss_pred             hhhhhCCchHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHH
Q psy17194        128 LIDRIGYDLPMMIGLCIMFLSTALFACGR-----SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA  202 (871)
Q Consensus       128 l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-----s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~  202 (871)
                      ++||+|||++++.+.++.+++.++..+++     +++.+++.|++.|++.+...+...+++.|++ |+++|++++++.+.
T Consensus        57 l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  135 (365)
T TIGR00900        57 LADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLV-PEEQLTQANSLSQA  135 (365)
T ss_pred             HHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHhHHHH
Confidence            99999999999999999999888888887     9999999999999999999999999999986 67899999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC----CCcccchhhhhcchhHHHH
Q psy17194        203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE----SHSTVPIWKLFMDPYIAVC  278 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  278 (871)
                      ...+|.++||.+++.+.+..|||+.|++.++..++..++.+...++.+++.++++.+    ++.....+..+|+|.++..
T Consensus       136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (365)
T TIGR00900       136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTL  215 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHH
Confidence            999999999999999999999999999988776665554444332222111111101    0111234456788888877


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q psy17194        279 SGALLMANVALAFLE-PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       279 ~~~~~~~~~~~~~~~-~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      ....++......... .+.|.|.++.+|.+..+.+.+.....++..++.++.+++.||+++++..  ..+..+.+++.+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~  293 (365)
T TIGR00900       216 LLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM--TGAIFVIGLAILV  293 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH--HHHHHHHHHHHHH
Confidence            776666666665555 7788888877899999999999999999999999999999999988854  4555555666666


Q ss_pred             hhcchh-hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        358 IPFSTS-YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       358 ~~~~~~-~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      ..+.++ .+..++..++.+++.+...+.....   ..+..|+++||++.|+.+....++..++|.+.|.+.|..|
T Consensus       294 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g  365 (365)
T TIGR00900       294 VGLTPPNFPLFLVLWFAIGVGYGPINVPQGTL---LQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG  365 (365)
T ss_pred             HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            655553 6666677777788877764444333   4444566999999999999999999999999999998764

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=100.00  E-value=3.1e-30  Score=288.34  Aligned_cols=369  Identities=18%  Similarity=0.212  Sum_probs=277.4

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHH-HHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYL-RFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      .++.+..+.+..++..++.++..|++|.+. +++|.                           |+.+.|++.+++.+++.
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~---------------------------s~~~~g~~~~~~~~~~~   65 (399)
T PRK05122         13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF---------------------------SAFLAGLVISLQYLATL   65 (399)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---------------------------cHHHHHHHHHHHHHHHH
Confidence            345566788888999999999999999865 55654                           89999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChh
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG--------RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEEN  191 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a--------~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~  191 (871)
                      +++++.|+++||+|||++++.+.++.+++.+.+.++        .+++.+++.|+++|++.+...+...+++.|++ |++
T Consensus        66 i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~  144 (399)
T PRK05122         66 LSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV-GAL  144 (399)
T ss_pred             HhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc-Chh
Confidence            999999999999999999999999888877666543        25778999999999999999999999999987 678


Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhc
Q psy17194        192 ERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  271 (871)
Q Consensus       192 ~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (871)
                      +|++++++...+..+|.++|+.+++.+.+.+||+..+++.+++.++..+.   .. +.++..+++ +   +..+.++.+|
T Consensus       145 ~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~-~---~~~~~~~~~~  216 (399)
T PRK05122        145 HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLL---AR-PRPAVPPVK-G---ERLPFRRVLG  216 (399)
T ss_pred             hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH---Hh-cCCCCCCCC-c---cchhHHHHHH
Confidence            99999999999999999999999999999999999988776665443222   11 111111111 1   1112333333


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      +  .+.......+..........+.+.|+.+ .|.+  ..++..+.+.++.+++.++.+++.||+++|+.+  ..+..+.
T Consensus       217 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~  289 (399)
T PRK05122        217 R--VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVA--IVSLLVE  289 (399)
T ss_pred             H--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHH
Confidence            2  1222222223344455566677777765 4553  445666777888899999999999999998854  5555566


Q ss_pred             HHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        352 GLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       352 ~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      +++.+.....++.+.+++..++.|++.+...+....   ...+..|+++||++.|+.+....+|..++|.+.|.+.+..|
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~---~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g  366 (399)
T PRK05122        290 ILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGV---EAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG  366 (399)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            666666666667666667777788888766433332   33445567999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        432 FTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       432 ~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      |++.|++.+++.++++++.++.++
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~  390 (399)
T PRK05122        367 YPSIFLAAALAALLGLALTWLLYR  390 (399)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999988877776666555443

>TIGR00899 2A0120 sugar efflux transporter

Probab=100.00  E-value=4.1e-30  Score=285.03  Aligned_cols=365  Identities=15%  Similarity=0.131  Sum_probs=278.4

Q ss_pred             HHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHh
Q psy17194         50 TALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGAL  128 (871)
Q Consensus        50 ~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l  128 (871)
                      +.+++..+..+...|.+|.+.+ ++|.                           |+.+.|++.+++.+...+.+++.|++
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~---------------------------s~~~~g~~~~~~~~~~~~~~~~~g~l   56 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRA---------------------------RPAMIGLFYTGSAIVGIAVSQLLATR   56 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4466777888888899998764 5554                           89999999999999999999999999


Q ss_pred             hhhhCCchHHH-HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH--HHHHHHHHH
Q psy17194        129 IDRIGYDLPMM-IGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA--LGIALAFIS  205 (871)
Q Consensus       129 ~Dr~Grr~~l~-~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~--~g~~~~~~~  205 (871)
                      +||+||||.++ .+.++.+++.++++++++++.+++.|++.|.+.+...|...+++.|+. |+++|++.  .+......+
T Consensus        57 ~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  135 (375)
T TIGR00899        57 SDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHA-DRTGREAVMFSSVMRAQIS  135 (375)
T ss_pred             HhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHh-hhcchhhHHHHHHHHHHHh
Confidence            99999988765 466666777888899999999999999999888888898889888875 55566644  688888899


Q ss_pred             HHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHH
Q psy17194        206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMA  285 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (871)
                      +|.++||.+++.+.+.+|||+.|++.+++.++..++.+++.||.+++.+++    +...+.++.++++.++......++.
T Consensus       136 ~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  211 (375)
T TIGR00899       136 LAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA----LTRLEVRGLLASRDTRLLFVACTLM  211 (375)
T ss_pred             HHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc----cCcchhhhhhcCcchHHHHHHHHHH
Confidence            999999999999999999999999999888877777777677654322111    1122334466777776655555554


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhH
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQ  365 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (871)
                      ..........+|.|+++++|.++.+.+++.........++.++.|++.||+++|+.+  ..+.....+........++.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--~~~~~~~~~~~~~~~~~~~~~  289 (375)
T TIGR00899       212 WGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM--LLAALAGVAFYTGLAADNSLW  289 (375)
T ss_pred             HHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH--HHHHHHHHHHHHHHHHHHHHH
Confidence            444555566778888888999999999888777777788889999999999999855  344444444444444455666


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHH
Q psy17194        366 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  445 (871)
Q Consensus       366 ~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~  445 (871)
                      ..++..++.+++.+...+.......   +. .++++++++++.+...++|..++|.+.|.+.+..||+..|++.+++.++
T Consensus       290 ~~~~~~~~~g~~~g~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~  365 (375)
T TIGR00899       290 ALLMLQLLNAIFIGILAGIGMLYFQ---DL-MPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIV  365 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH---Hh-CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence            6666666777777765433333322   22 3456789999999999999999999999999999999999988887776


Q ss_pred             HHHHHHH
Q psy17194        446 YAPVLIY  452 (871)
Q Consensus       446 ~~~~~~~  452 (871)
                      +.++..+
T Consensus       366 ~~~~~~~  372 (375)
T TIGR00899       366 ALFCLLL  372 (375)
T ss_pred             HHHHHhe
Confidence            6655543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=100.00  E-value=8.6e-30  Score=284.38  Aligned_cols=366  Identities=17%  Similarity=0.182  Sum_probs=275.4

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      .+.+..++..+......|.+|.+.++++.                           +..+.++..+++.+++.++++++|
T Consensus        20 ~~~~~~~~~~~~~~~~~p~l~~i~~~~~~---------------------------~~~~~~~~~s~~~~~~~~~~~~~G   72 (413)
T PRK15403         20 ALILYDFAAYLTTDLIQPGIINVVRDFNA---------------------------DVSLAPASVSLYLAGGMALQWLLG   72 (413)
T ss_pred             HHHHHHHHHHHHHHhhccCHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHHhhh
Confidence            33445566777888999999999999876                           889999999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISF  206 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~  206 (871)
                      +++||+|||++++.+.++++++.+++.+++|++.++++|+++|++.+...+...+++.|++ |+++|++++++......+
T Consensus        73 ~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  151 (413)
T PRK15403         73 PLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAF-GQTKGIKLMAIITSIVLV  151 (413)
T ss_pred             HHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999877788888999987 668999999999999999


Q ss_pred             HHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHH
Q psy17194        207 GCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  286 (871)
Q Consensus       207 G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (871)
                      |..+||++++.+.+++|||+.|++.+++.++..+..++..||.+++.+++.+.+....+.++++|||.++...+..++..
T Consensus       152 ~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~  231 (413)
T PRK15403        152 APIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSY  231 (413)
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            99999999999999899999999999888877666555566643321111111112235567889999988877777777


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh---cchh
Q psy17194        287 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP---FSTS  363 (871)
Q Consensus       287 ~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~~  363 (871)
                      .....+..+.|.++++.+|.++.+.++.......+..++..+.+++.+|..+++...........+...+...   ..++
T Consensus       232 ~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~  311 (413)
T PRK15403        232 IPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHV  311 (413)
T ss_pred             HHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            7777777788999999899999999998887788888888888887655544443211111111111111111   1223


Q ss_pred             hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHH
Q psy17194        364 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMN  443 (871)
Q Consensus       364 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~  443 (871)
                      .+..++..++.++|.+...+......  ..+  ....+|++.++.+.....+..+++...|++.++ +-.+.|...+++.
T Consensus       312 ~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~--~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~  386 (413)
T PRK15403        312 WLWSVLGTSLYAFGIGLIFPTLFRFT--LFS--NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVA  386 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHH--hcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHH
Confidence            33345566777888777644333211  111  123479999999999999999999999988776 5566666555444


Q ss_pred             HH
Q psy17194        444 IL  445 (871)
Q Consensus       444 ~~  445 (871)
                      .+
T Consensus       387 ~~  388 (413)
T PRK15403        387 GV  388 (413)
T ss_pred             HH
Confidence            43

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=100.00  E-value=5.9e-30  Score=287.19  Aligned_cols=380  Identities=19%  Similarity=0.208  Sum_probs=287.4

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      +....++++.++..+..+...|++|.+.+++|....                      +......|++.+++.++..+++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~----------------------~~~~~~~g~~~~~~~~~~~~~~   71 (408)
T PRK09874         14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGH----------------------SALNMWSGLVFSITFLFSAIAS   71 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccc----------------------hhHHHHHHHHHHHHHHHHHHHH
Confidence            345566777888888888999999999999876110                      0012346999999999999999


Q ss_pred             hhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHH
Q psy17194        123 PFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA  202 (871)
Q Consensus       123 ~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~  202 (871)
                      +++|+++||+|||++++.+.++.+++.+++.++++++.+++.|++.|++.+ ..+...+++.+++ |+++|++++++...
T Consensus        72 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~  149 (408)
T PRK09874         72 PFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQV-PRNKSGWALGTLST  149 (408)
T ss_pred             HHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhc-CHhhhhHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999866 4577788889986 67899999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHH-HHH
Q psy17194        203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVC-SGA  281 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  281 (871)
                      ...+|..++|.+++.+.+.++||+.|++.+++.++..+..+++.++.+++.++  +++.+..+..+.+++++++.. ...
T Consensus       150 ~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  227 (408)
T PRK09874        150 GGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSK--KEMLHMREVVTSLKNPKLVLSLFVT  227 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccc--hhhhHHHHHHHhCcCCchHHHHHHH
Confidence            99999999999999999989999999999988887777666666654322111  111112233455667665443 333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCch---hHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNW---KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII  358 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~---~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~  358 (871)
                      .+..........++++.|+.+..+....   ..+.+.+...++..++.+..|++.||+++|+.+  ..+..+..++.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~--~~~~~~~~~~~~~~  305 (408)
T PRK09874        228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKIL--ITALIFSVLLLIPM  305 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhH--HHHHHHHHHHHHHH
Confidence            3334444555667778887765442221   245555666778888899999999999998855  45555555555555


Q ss_pred             hcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHH
Q psy17194        359 PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFL  438 (871)
Q Consensus       359 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~  438 (871)
                      .+.++.+.+++..++.|++.+...+......   .+..+++++|+.+++.+....+|..+||.++|.+.+..||++.|++
T Consensus       306 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~  382 (408)
T PRK09874        306 SFVQTPLQLGILRFLLGAADGALLPAVQTLL---VYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLV  382 (408)
T ss_pred             HHhccHHHHHHHHHHHHhhhHhhHHHHHHHH---HHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHH
Confidence            5556666667777778888877644444443   3334568899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q psy17194        439 IAFMNILYAPVLIYL  453 (871)
Q Consensus       439 ~~~~~~~~~~~~~~~  453 (871)
                      .+++.++..+..++.
T Consensus       383 ~~~~~l~~~~~~~~~  397 (408)
T PRK09874        383 TAGVVLFNAVYSWNS  397 (408)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            988877766655443

>PRK03893 putative sialic acid transporter; Provisional

Probab=100.00  E-value=3.9e-30  Score=296.26  Aligned_cols=370  Identities=15%  Similarity=0.158  Sum_probs=266.7

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      ++++.+..++++++++.++.....+.+|.+.+++|.                           ++.+.+++.+.+.+++.
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---------------------------s~~~~~~~~~~~~~~~~   69 (496)
T PRK03893         17 AQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL---------------------------TTVQAASLISAAFISRW   69 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHH
Confidence            345677788899999999999999999999999866                           88999999999999999


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      ++.++.|+++||+|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++
T Consensus        70 ~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~  148 (496)
T PRK03893         70 FGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW-PKHLRNKASGF  148 (496)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999997 67899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhh-hcc-hhHH-
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKL-FMD-PYIA-  276 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-  276 (871)
                      ...+..+|..+++.+++.+.+.++||+.|++..+..++ .++.....|+.++..++++++. ...+..+. .++ +... 
T Consensus       149 ~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  226 (496)
T PRK03893        149 LISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIF-ALWLRKNLPEAEDWKEKHAGKA-PVRTMVDILYRGEHRIIN  226 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhCCCchhhhhhccccc-cchhHHHHHhcchhHHHH
Confidence            99999999999999999999999999999875444333 2222333344322111111111 00000010 000 0000 


Q ss_pred             ----------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        277 ----------------------------------------------------VCSGALLMANVALAFLEPTISLWIEDNL  304 (871)
Q Consensus       277 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~  304 (871)
                                                                          ......+...........++|.|+++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~  306 (496)
T PRK03893        227 ILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDL  306 (496)
T ss_pred             HHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhc
Confidence                                                                0000000000001123467889998889


Q ss_pred             CCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc--hhhHHHHHHHHHHH-HHHhhh
Q psy17194        305 TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS--TSYQMLMLPICGIC-FGMALV  381 (871)
Q Consensus       305 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g-~g~~~~  381 (871)
                      |.+..+.+++.+...++.+++.++.|+++||+|+|+.+  ..+..+..+..+.....  .+.+......++.+ .+.+ .
T Consensus       307 g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  383 (496)
T PRK03893        307 GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY--VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQG-I  383 (496)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcc-c
Confidence            99999999999999999999999999999999998865  33443333333322222  22222222222222 2222 1


Q ss_pred             hhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHH
Q psy17194        382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  445 (871)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~  445 (871)
                      .+...   ..+.+..|+++||+++|+.+....+|..+||.+.|.+.|.+||+..+...+....+
T Consensus       384 ~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~  444 (496)
T PRK03893        384 SGLLP---KLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF  444 (496)
T ss_pred             chhhH---HHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence            12222   23345556789999999999999999999999999999999999887665544433

>TIGR00897 2A0118 polyol permease family

Probab=100.00  E-value=8e-30  Score=284.51  Aligned_cols=378  Identities=16%  Similarity=0.173  Sum_probs=280.5

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .++.+....++.++.........+.++.+.+++|.                           ++.+.|++.+.+.+++.+
T Consensus        11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~i   63 (402)
T TIGR00897        11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGL---------------------------SPQQSASAFTLYGIAAAI   63 (402)
T ss_pred             CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCC---------------------------CHHHhHHHHHHHHHHHHH
Confidence            34455666777777777777667778888888765                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFA---C-GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~---~-a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      ++++.|+++||+|||+++..+.++.+++.+++.   + .++++.+++.|+++|++.+...+...+.+.+++ |+++|+++
T Consensus        64 ~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~-~~~~~g~~  142 (402)
T TIGR00897        64 SAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNT-KQDNLSSA  142 (402)
T ss_pred             HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhC-CHHHHHHH
Confidence            999999999999999999999999988876553   3 357889999999999999888888888888986 56899999


Q ss_pred             HHHHHHHHHHHH-HHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC--CCcccchhhhhcch
Q psy17194        197 LGIALAFISFGC-LVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE--SHSTVPIWKLFMDP  273 (871)
Q Consensus       197 ~g~~~~~~~~G~-~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  273 (871)
                      +|+.+.+.++|. .+||.+++++.+.+||+..++......++..++..++.++.+++.++++++  ++.....+.++|+|
T Consensus       143 ~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (402)
T TIGR00897       143 VGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNP  222 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcCh
Confidence            999999999997 689999999988889776666554444444444444444432221111111  11122345678899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  353 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~  353 (871)
                      .++......++..........+.|.|+++ +|.+..+.+.+.+...++..++.+..|+++||+++|+... ..+....++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~l~~~~  300 (402)
T TIGR00897       223 NVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVR-WFGGVGCGI  300 (402)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHH
Confidence            88887777777677777778889988865 8999999998888889999999999999999999887542 122222222


Q ss_pred             HHHHhh-----cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        354 CCFIIP-----FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       354 ~~~~~~-----~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      ..+.+.     ..++.+..++..++.|++.+...    +..... ...++++||+++|+.+....+|..++|.+.|.+.|
T Consensus       301 ~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~----~~~~~~-~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~  375 (402)
T TIGR00897       301 FTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV----PLAAVF-PTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIG  375 (402)
T ss_pred             HHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH----HHHHHH-HhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            211111     12344555555666666665542    222222 22455789999999999999999999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHHHH
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                      ..|+...+++.+++.++..++..+.
T Consensus       376 ~~g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       376 FFGAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             hcchHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999888877776665554

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>PRK03633 putative MFS family transporter protein; Provisional

Probab=100.00  E-value=1.6e-29  Score=280.21  Aligned_cols=363  Identities=14%  Similarity=0.156  Sum_probs=272.5

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      +.+..++++.++..+..+...|.+|.+.+++|.                           |..++|++.+.+.+++.+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------s~~~~G~~~s~~~l~~~~~~   58 (381)
T PRK03633          6 RPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL---------------------------PTWQVGVVSSSYFTGNLVGT   58 (381)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHH
Confidence            346677888888999999999999999999866                           88999999999999999999


Q ss_pred             hhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHH
Q psy17194        123 PFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA  202 (871)
Q Consensus       123 ~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~  202 (871)
                      ++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+...+.+.+.. ++++|++++++++.
T Consensus        59 ~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  137 (381)
T PRK03633         59 LLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG-TSRNRGRLLAAYMM  137 (381)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999888888888876 56899999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHH
Q psy17194        203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL  282 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (871)
                      ..++|..+||.+++.+.+...|...+. .+....... ...+. +.++++.  ++   ++..+.++.+|+|.++......
T Consensus       138 ~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~  209 (381)
T PRK03633        138 VYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAIL-PLLFT-RILNQQA--EN---HDSTSIWPMLKLRQARLGVNGC  209 (381)
T ss_pred             HHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHH-HHHHh-cccCCCC--CC---CCCCCHHHHHHhcchHHHHHHH
Confidence            999999999999999877543443333 222222211 12221 1111111  11   1123445677888776654444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch
Q psy17194        283 LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST  362 (871)
Q Consensus       283 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (871)
                      +...........++|.|+++ .|.++.+.+...+...++.++++++.+++.||+++|+.+  ..+..+..++.+...  .
T Consensus       210 ~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l--~~~~~~~~~~~~~~~--~  284 (381)
T PRK03633        210 IISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL--RVQVFVVILGSIAML--S  284 (381)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH--HHHHHHHHHHHHHHh--h
Confidence            44444555666778888876 588999999999988999999999999999999998855  444444444443332  1


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFM  442 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~  442 (871)
                       .........+.+++.+...+.   ......+..++++++.+.+..+...++|.++||.++|++.|+.|+++.|.+.+.+
T Consensus       285 -~~~~~~~~~l~g~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~  360 (381)
T PRK03633        285 -QAAMAPALFILGAAGFTLYPV---AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASV  360 (381)
T ss_pred             -hHHHHHHHHHHHHHHHhHHHH---HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHH
Confidence             122223344555554444332   3333445556677788888888889999999999999999999999999988777


Q ss_pred             HHHHHHHH
Q psy17194        443 NILYAPVL  450 (871)
Q Consensus       443 ~~~~~~~~  450 (871)
                      .++.....
T Consensus       361 ~l~~~~~~  368 (381)
T PRK03633        361 SFIYLLML  368 (381)
T ss_pred             HHHHHHHH
Confidence            76554433

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=100.00  E-value=1e-29  Score=286.41  Aligned_cols=378  Identities=14%  Similarity=0.102  Sum_probs=259.5

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchh---HHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDS---ATGVLFASKAIV  117 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~---~~g~~~s~~~l~  117 (871)
                      ++..+...+++.+++.++...+....|.+.++++..                        +.+..   +.+.+.+...++
T Consensus        20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~   75 (432)
T PRK10406         20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPS------------------------GNTTTQLLQTAGVFAAGFLM   75 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------------------CCchHHHHHHHHHHHHHHHH
Confidence            344566667888999999999988889998887521                        11333   344455555666


Q ss_pred             HHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHhhhhhhhhhHHHHhhcccCC
Q psy17194        118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYG--------VLFFARSLQGVGSAFADTSGLAMIADRFTE  189 (871)
Q Consensus       118 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~--------~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~  189 (871)
                      ..++++++|+++||+|||+++..+.++++++++++++++++.        .+++.|+++|++.|..++...++++|++ |
T Consensus        76 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~-p  154 (432)
T PRK10406         76 RPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVA-V  154 (432)
T ss_pred             HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhC-C
Confidence            669999999999999999999999999999999999988764        5889999999999999999999999987 6


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh--------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        190 ENERSQALGIALAFISFGCLVAPPFGGALYQ--------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  261 (871)
Q Consensus       190 ~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~--------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~  261 (871)
                      +++|+++.++.+.+...|.++++.+...+..        .+|||++|++.+++.++.. ......||.++.++++   .+
T Consensus       155 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~~~~~---~~  230 (432)
T PRK10406        155 EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQETRA---LK  230 (432)
T ss_pred             CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchHHHhh---hc
Confidence            6899999999999999998888877665542        5799999999887776543 2233344433221111   11


Q ss_pred             cccchhhhhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchh
Q psy17194        262 STVPIWKLFMDPYIAVCSGALLM-ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ  340 (871)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~  340 (871)
                      +..+.++++|++..+.......+ ....++.+..++|.|+++.+|.+..+.+...+...+...++.++.|+++||++||+
T Consensus       231 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~  310 (432)
T PRK10406        231 EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT  310 (432)
T ss_pred             ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence            12346678888877665544443 35566677889999998888999888888888877888888999999999999988


Q ss_pred             HHHHHHHHHHHHHHHH--H--hhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH-H
Q psy17194        341 WLMVAVGLVLEGLCCF--I--IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-A  415 (871)
Q Consensus       341 ~~~~~~~~~~~~~~~~--~--~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l-g  415 (871)
                      .+.  ....+..+...  .  .....+....+....+..++.+...+   .......+.+|++.|+++.|+.+...++ .
T Consensus       311 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~  385 (432)
T PRK10406        311 SML--CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTS---ISGILKAEMFPAQVRALGVGLSYAVANALF  385 (432)
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCCCccchhhhHHHHHHHHHH
Confidence            553  22222211111  1  11112222222111212222222211   1222344567779999999999876554 3


Q ss_pred             HHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHHHH
Q psy17194        416 YAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       416 ~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                      +...|.+.+.+ +..| |...+++.++..++..+..+++
T Consensus       386 g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        386 GGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             HhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence            45577777754 5556 5555555555555555554443

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=100.00  E-value=1.4e-29  Score=281.97  Aligned_cols=359  Identities=15%  Similarity=0.182  Sum_probs=274.3

Q ss_pred             hhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         44 ILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      .+..+....++.........|.+|.+.+++|.                           ++.+.|++.+++.++..++.+
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~~~~~   58 (385)
T TIGR00710         6 FALLLGCLSILGPLGIDMYLPAFPEIAADLST---------------------------PASIVQMTLTLYLLGFAAGQL   58 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence            33444444566777888889999999999876                           889999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      +.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++.+..
T Consensus        59 ~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  137 (385)
T TIGR00710        59 LWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIY-PGEELSRIYSILMPV  137 (385)
T ss_pred             hhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhc-CcHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999987 668999999999999


Q ss_pred             HHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHH
Q psy17194        204 ISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL  283 (871)
Q Consensus       204 ~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (871)
                      ..+|..+|+.+++.+.+.++||+.|++.+++.++..+..++..||.+++.++ ++.++.....++.+|++.++.......
T Consensus       138 ~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (385)
T TIGR00710       138 LALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEAR-IQISTYFETFLLLLKSKMFWGYALIYG  216 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-CCHHHHHHHHHHHHcCchhHHHHHHHH
Confidence            9999999999999999999999999999888887777666666654332211 111122234556788888877766666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc--
Q psy17194        284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS--  361 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--  361 (871)
                      +..........+.|.++++.+|.++.+.+++.....++.+++.++.+++.||+++|+.+  ..+..+..++.+++...  
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  294 (385)
T TIGR00710       217 ASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL--RMGLILFAVSAVLLEITAI  294 (385)
T ss_pred             HHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence            65666666667778888888999999999999999999999999999999999998855  33444444433333221  


Q ss_pred             ---hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHH
Q psy17194        362 ---TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNF  437 (871)
Q Consensus       362 ---~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~  437 (871)
                         .+....+...++.+++.+...+..   .....+.. +++++++.++.+.....++.+.+.+.+.+.+..++...+.
T Consensus       295 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~  369 (385)
T TIGR00710       295 LGLGSWAMIIGPMMFVGIGNSMISSIA---MAYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLS  369 (385)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHH---HHHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHH
Confidence               122333444455666666553322   23334443 4688999999988887766666666665544444443333

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=100.00  E-value=1.1e-29  Score=294.45  Aligned_cols=381  Identities=15%  Similarity=0.155  Sum_probs=287.1

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .|..+++++++.+.+.++...+.+++|.+.+++|.                           +..+.+++.+++.++.++
T Consensus       165 ~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl---------------------------s~~~~g~l~s~~~lG~ii  217 (742)
T TIGR01299       165 QWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI---------------------------PDSGKGMLGLIVYLGMMV  217 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            45566677778888888888889999999999876                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +++++|+++||+|||+++++++++.+++.++++++++++.++++|++.|++.|...+...+++.|++ |+++|++.++++
T Consensus       218 G~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~-p~~~Rg~~~g~~  296 (742)
T TIGR01299       218 GAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFL-AQEKRGEHLSWL  296 (742)
T ss_pred             HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999986 778999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhh-------------CChhHHHHHHHHHHHHHHHHHHhcccchhhhcc------------
Q psy17194        201 LAFISFGCLVAPPFGGALYQFA-------------GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ------------  255 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~-------------gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~------------  255 (871)
                      .++..+|.++++.++..+...+             +||+.+++.++.+++. ++..+++||+|.....            
T Consensus       297 ~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~  375 (742)
T TIGR01299       297 CMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILK  375 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHH
Confidence            9999999999999887776533             5899888877766554 4455666776532100            


Q ss_pred             -----CCCCC-------------------------Cccc-------------------chhhhhcc---hhHHHHHHHHH
Q psy17194        256 -----KKPES-------------------------HSTV-------------------PIWKLFMD---PYIAVCSGALL  283 (871)
Q Consensus       256 -----~~~~~-------------------------~~~~-------------------~~~~~~~~---~~~~~~~~~~~  283 (871)
                           +.+..                         ....                   +++++++.   +..+.+.+..+
T Consensus       376 ~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf  455 (742)
T TIGR01299       376 LIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWF  455 (742)
T ss_pred             HHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHH
Confidence                 00000                         0000                   12223332   23355666677


Q ss_pred             HHHHHHHHHHHHHHHHHHHh----h-------------------------------------CC-----C----------
Q psy17194        284 MANVALAFLEPTISLWIEDN----L-------------------------------------TT-----D----------  307 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~----~-------------------------------------g~-----s----------  307 (871)
                      ...+.++++..++|..+++.    +                                     |+     +          
T Consensus       456 ~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (742)
T TIGR01299       456 TLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECT  535 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccc
Confidence            77788888889999765431    0                                     00     0          


Q ss_pred             ----------------------------------------------------------chhHHHHHHhhHHhHHHHHHHH
Q psy17194        308 ----------------------------------------------------------NWKIGMIWLPAFFPHVFGVVIT  329 (871)
Q Consensus       308 ----------------------------------------------------------~~~~g~~~~~~~~~~~~~~~~~  329 (871)
                                                                                .....+...+..++.+++.++.
T Consensus       536 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~  615 (742)
T TIGR01299       536 FDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVS  615 (742)
T ss_pred             eeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                                      0011233455668889999999


Q ss_pred             HHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH
Q psy17194        330 VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD  409 (871)
Q Consensus       330 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~  409 (871)
                      |+++||+|||+.+  ..++++.+++++++++.++...+++..++.+++.+...+   .......+.+|.+.|++++|+.+
T Consensus       616 g~L~Dr~GRr~~l--~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~---~~~a~~aEl~Pt~~Rgta~Gi~~  690 (742)
T TIGR01299       616 ALLMDKIGRLRML--AGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWN---ALDVLTVELYPSDKRATAFGFLN  690 (742)
T ss_pred             HHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHH
Confidence            9999999999955  667777777777777776666666555666665554433   33344556677799999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhc
Q psy17194        410 ISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI  456 (871)
Q Consensus       410 ~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  456 (871)
                      ....+|.+++|+++|.+.+. +....|++.+++.++++++.++++++
T Consensus       691 ~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPET  736 (742)
T TIGR01299       691 ALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPDT  736 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            99999999999999988775 45667777777766666666655543

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>PRK12382 putative transporter; Provisional

Probab=100.00  E-value=1.7e-29  Score=281.47  Aligned_cols=367  Identities=16%  Similarity=0.157  Sum_probs=270.3

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHH-HHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYL-RFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQ  118 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~  118 (871)
                      +.+..+..+.++.++..+..++..|.+|.+. +++|.                           |..++|++.+++.+++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~---------------------------s~~~~g~~~s~~~~~~   64 (392)
T PRK12382         12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF---------------------------GNTMVGIAVGIQFLAT   64 (392)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC---------------------------cHHHHHHHHHHHHHHH
Confidence            3445566677778888888889999999865 56655                           8999999999999999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHH---h-----hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFA---C-----GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~---~-----a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~  190 (871)
                      .++++++|+++||+||||+++.+.++..++.+.+.   +     .++++.+++.|+++|++.+...+...+++.|++ |+
T Consensus        65 ~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~-~~  143 (392)
T PRK12382         65 VLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV-GP  143 (392)
T ss_pred             HHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-Cc
Confidence            99999999999999999999999888776654332   1     358899999999999999999999899999987 66


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhh
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLF  270 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (871)
                      ++|++++++.+.+...|..+||++++.+.+.+|||..+.+..+..++...    +.++.++.++++ ++   ..+.++.+
T Consensus       144 ~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~---~~~~~~~~  215 (392)
T PRK12382        144 KHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA----FNGTVRKVPAHA-GE---RPSLWSVV  215 (392)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH----HHHhccCCCCCc-cc---CchHHHHH
Confidence            89999999999999999999999999999989999887765554433222    112212111111 11   11222222


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q psy17194        271 MDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVL  350 (871)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~  350 (871)
                      |  .++......++..........+.+.|+++ .+.+.  .++....+.++.++++++.|++.||+|+|+.+  ..+..+
T Consensus       216 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--~~~~~~  288 (392)
T PRK12382        216 G--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA--IVSLLV  288 (392)
T ss_pred             H--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh--HHHHHH
Confidence            2  11111112222334444556677777765 45543  45666667788889999999999999998855  455555


Q ss_pred             HHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        351 EGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       351 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                      .+++.++....++.+..++..++.+++.+...+...   ....+..++++||++.|+.++...+|..++|.+.|.+.|+.
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~  365 (392)
T PRK12382        289 ETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALG---VEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF  365 (392)
T ss_pred             HHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            566666666666666666667777777776533332   33445566799999999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHH
Q psy17194        431 GFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       431 g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      ||++.|.+.+++.++.+++.+.
T Consensus       366 g~~~~~~~~~~~~~~~~~~~~~  387 (392)
T PRK12382        366 GYPSVFLAGAISAVLGIIVTIL  387 (392)
T ss_pred             CchHHHHHHHHHHHHHHHHHHh
Confidence            9999999988877776665543

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=100.00  E-value=4.4e-30  Score=295.25  Aligned_cols=354  Identities=15%  Similarity=0.196  Sum_probs=290.4

Q ss_pred             hhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         44 ILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      .+..++++.++..++.....+.+|.+.+++|.                           +..+.+++.+.+.++..++.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~---------------------------s~~~~~~~~~~~~~~~~~~~~   55 (485)
T TIGR00711         3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS---------------------------SLSQVQWVITSYMLANAISIP   55 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------------------ChhhhhHHHHHHHHHHHHHHH
Confidence            45567788889999999999999999999876                           788999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      +.|+++||+|||++++.+.++.+++.+++++++|++.+++.|+++|++.+...+...+++.|++ |+++|+++++++...
T Consensus        56 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~  134 (485)
T TIGR00711        56 LTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIY-PPEKRGRAMAIWGLT  134 (485)
T ss_pred             hHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999997 678999999999999


Q ss_pred             HHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC----------------------CC--
Q psy17194        204 ISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK----------------------PE--  259 (871)
Q Consensus       204 ~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~----------------------~~--  259 (871)
                      ..+|..+||.+++++.+++|||+.|++.+.++++..++..+..|+++++.+++.                      ++  
T Consensus       135 ~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~  214 (485)
T TIGR00711       135 VLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERG  214 (485)
T ss_pred             HHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence            999999999999999999999999999988887777766666665432211110                      00  


Q ss_pred             ---------------------------CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHH
Q psy17194        260 ---------------------------SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIG  312 (871)
Q Consensus       260 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g  312 (871)
                                                 ++++....+.+|++.++...+..++..........++|.|+++.+|.++.+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g  294 (485)
T TIGR00711       215 WFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAG  294 (485)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence                                       00111123567788887777777777777777788899999999999999999


Q ss_pred             HHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc--c--hhhHHHHHHHHHHHHHHhhhhhhhhhh
Q psy17194        313 MIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF--S--TSYQMLMLPICGICFGMALVDTALLPT  388 (871)
Q Consensus       313 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~l~~~~~l~g~g~~~~~~~~~~~  388 (871)
                      +......++..++.++.|++.||+|+|+.+  ..+..+.+++..++.+  .  .+.+......++.|+|.+...+..   
T Consensus       295 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~---  369 (485)
T TIGR00711       295 LHILPVGLAPMLSSPIAGRMGDKIDPRKLV--TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPL---  369 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCcHHHH--HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHH---
Confidence            999999999999999999999999998854  5556556665555442  1  234455556677788887763333   


Q ss_pred             hhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        389 LGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       389 ~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                      .....+..|++++|++.|+.++...+|..+|+.+.|.+.++.
T Consensus       370 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~  411 (485)
T TIGR00711       370 TTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR  411 (485)
T ss_pred             HHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            333344557799999999999999999999999999988753

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.98  E-value=5.5e-30  Score=291.94  Aligned_cols=404  Identities=13%  Similarity=0.129  Sum_probs=294.2

Q ss_pred             ccccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHH
Q psy17194         38 KSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIV  117 (871)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~  117 (871)
                      ...|+.+..+++++..+.+.++..+....+.+.++-..   +  +..-..+....+...+.+++.+..+.|++.+++.++
T Consensus        14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~   88 (465)
T TIGR00894        14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENS---T--DLACLSAENELDNIKNPNFKWSGALQGLILSSHFYG   88 (465)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCC---C--CccccccccccccccCCCCCCCHHHhhHHHHHHHHH
Confidence            34456777788888888899999988888877653110   0  000000001112223447789999999999999999


Q ss_pred             HHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG--RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       118 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a--~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      +.+++++.|+++||+|||+++..+.++.+++.+++.++  .+++.+++.|+++|++.+...+....+++|++ |+++|++
T Consensus        89 ~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~  167 (465)
T TIGR00894        89 QIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWA-PPKERSR  167 (465)
T ss_pred             HHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcC-CHHHHHH
Confidence            99999999999999999999999999999998887554  56888999999999999999999999999997 6789999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhh-CChhHHHHHHHHHHHHHHHHHHhcccchhhhccC-------------CC--C
Q psy17194        196 ALGIALAFISFGCLVAPPFGGALYQFA-GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK-------------KP--E  259 (871)
Q Consensus       196 ~~g~~~~~~~~G~~lg~~l~~~l~~~~-gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~-------------~~--~  259 (871)
                      ++++...+..+|.++++++++.+.+.+ |||++|++.++++++..++.+.+.++.|+..+..             ++  +
T Consensus       168 ~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~  247 (465)
T TIGR00894       168 LLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGS  247 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCC
Confidence            999999999999999999999999884 9999999999988887777776666544321110             00  0


Q ss_pred             CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCch
Q psy17194        260 SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY  339 (871)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~  339 (871)
                      .+...+++++++++.++...+..+........+..++|.|+++.+|.+..+.++..+...++..++.++.|+++||+++|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~  327 (465)
T TIGR00894       248 TRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSS  327 (465)
T ss_pred             CCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            11123467788999999888888888888888889999999999999999999999999999999999999999987544


Q ss_pred             hH--------HHHHHHHHHHHHHHHHhhc-chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHH
Q psy17194        340 QW--------LMVAVGLVLEGLCCFIIPF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADI  410 (871)
Q Consensus       340 ~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~  410 (871)
                      +.        +....+..+.++..+.... ..+....++...+.+.+.+...    +..........++.+|.+.++.+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~g~~~g~~~~  403 (465)
T TIGR00894       328 KTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPL----AGVLINSLDLAPRFLGFIKGITGL  403 (465)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhh----hhhhhchhhcChhHHHHHHHHHHH
Confidence            21        1111111111111211222 2233333333333333333221    111112222344688999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhh---ChhhHHHHHHHHHHHHHHHHH
Q psy17194        411 SYSLAYAIGPIVAGGIVDAI---GFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       411 ~~~lg~~igp~l~g~l~~~~---g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      ...+++.++|.+.|.+.+..   +|...|.+.++..+++.++..
T Consensus       404 ~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~  447 (465)
T TIGR00894       404 PGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL  447 (465)
T ss_pred             HHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence            99999999999999988753   378888888777766655443

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.98  E-value=2.6e-29  Score=278.29  Aligned_cols=362  Identities=15%  Similarity=0.132  Sum_probs=286.5

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      .+.+.++...+..+...|++|.+.+++|.                           |..++|++.+++.+...++++++|
T Consensus         8 ~l~~~~~~~~~~~~~~~p~l~~~l~~~g~---------------------------s~~~ig~~~s~~~~~~~~~~~~~g   60 (382)
T TIGR00902         8 WLALGFFGYFCAYGIFLPFFPAWLKGIGL---------------------------GEEMIGLLIGAALIARFAGGLFFA   60 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            35666777788889999999999999876                           899999999999999999999999


Q ss_pred             HhhhhhCCchHH----HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPM----MIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALA  202 (871)
Q Consensus       127 ~l~Dr~Grr~~l----~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~  202 (871)
                      +++||+|||+..    ..+..+..+  ..+..+++++.+++.|+++|.+.+...|...++..++   +++|++++|....
T Consensus        61 ~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~  135 (382)
T TIGR00902        61 PLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW---QKQFGLDYGKVRL  135 (382)
T ss_pred             HHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH---HHHcCCCccHHHH
Confidence            999999985433    222222222  2445678999999999999999998899988887663   3689999999999


Q ss_pred             HHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHH
Q psy17194        203 FISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL  282 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (871)
                      ..++|.++||++++.+.+++|||..|++.++..++ .++.....++.+++.++++++.+...+.++++|+|+++......
T Consensus       136 ~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~  214 (382)
T TIGR00902       136 IGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAV  214 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHH
Confidence            99999999999999999999999999887665333 33333333332221111111112223467888999999888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch
Q psy17194        283 LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST  362 (871)
Q Consensus       283 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (871)
                      ++.........++.|.|+++ .|.++.++|.+++...++.+++..+.+++.||+|.|+.+  ..+.....+....+++.+
T Consensus       215 ~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l--~~~~~~~~~~~~~~~~~~  291 (382)
T TIGR00902       215 CLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL--LISAIACVGRWAIIGAIE  291 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH--HHHHHHHHHHHHHHHhHh
Confidence            88888888888999999976 899999999999998999999999999999999999854  778888888888888888


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhChhhHHHHHHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  441 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~-~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~  441 (871)
                      +.+.++...++.++..+...+.   ...++.+. |++++++++++++ ....+|..++|.++|.+.|+.|+ ..|++.+.
T Consensus       292 ~~~~~~~~q~l~g~~~~~~~~~---~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~  366 (382)
T TIGR00902       292 AFPLIFLLQILHCGTFAVCHLA---AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAI  366 (382)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH---HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHH
Confidence            9888888889999999887444   33344444 7788999999986 46789999999999999999986 66777777


Q ss_pred             HHHHHHHH
Q psy17194        442 MNILYAPV  449 (871)
Q Consensus       442 ~~~~~~~~  449 (871)
                      +.+++.++
T Consensus       367 ~~~~~~~~  374 (382)
T TIGR00902       367 IAAAAFFL  374 (382)
T ss_pred             HHHHHHHH
Confidence            66655433

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>PRK10133 L-fucose transporter; Provisional

Probab=99.98  E-value=3.5e-29  Score=280.73  Aligned_cols=370  Identities=14%  Similarity=0.128  Sum_probs=272.4

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      ....+..+++.+++..+......+.+|.+.+++|.                           ++.+.|++.+.+.+++.+
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~---------------------------s~~~~gl~~~~~~~g~~i   76 (438)
T PRK10133         24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL---------------------------TNFQAGLIQSAFYFGYFI   76 (438)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34455677777788888888889999999888866                           899999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALF---ACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~---~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      ++++.|+++||+|||+++..+.++++++.+++   .++++++.++++|+++|+|.|...+...+++.|+ +++++|.+.+
T Consensus        77 ~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~-~~~~~~~~~~  155 (438)
T PRK10133         77 IPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL-GPESSGHFRL  155 (438)
T ss_pred             HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CChhhHHHHH
Confidence            99999999999999999999999999999875   4678999999999999999999999999999996 5666777789


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHh------------------h--------hCChhHHHHHHHHHHHHHHHH-HHhcccch
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQ------------------F--------AGKEIPFLILAFVSLLDGFML-LLVMKPVK  250 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~------------------~--------~gwr~~f~~~~~~~l~~~i~~-~~~~~~~~  250 (871)
                      ++.+....+|..+|+.+++.+..                  .        .+||++|+....+..+..++. ....|+.+
T Consensus       156 s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~  235 (438)
T PRK10133        156 NLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQ  235 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            99999999999999999876541                  0        357777765443333222222 22223321


Q ss_pred             hhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhCCCchhHHHHHHhhHHhHHHHHHHH
Q psy17194        251 EQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWI-EDNLTTDNWKIGMIWLPAFFPHVFGVVIT  329 (871)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~  329 (871)
                      ++.+.+++..+.....++++++|.++...+..++..........+.+.|+ ++.+|.++.+.++....+.++.+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~  315 (438)
T PRK10133        236 SDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTG  315 (438)
T ss_pred             ccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111101111123346788899887766666666666666677788885 56789999999999999999999999999


Q ss_pred             HHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH
Q psy17194        330 VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD  409 (871)
Q Consensus       330 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~  409 (871)
                      +++.||+++|+.+  ..+..+..+++++..+.++.. .+....+.+++.+...|...+...+.    .+++.+.+.++..
T Consensus       316 g~l~~r~g~~~~l--~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~P~~~s~a~~~----~~~~~~~as~l~~  388 (438)
T PRK10133        316 TWLISRFAPHKVL--AAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQYPTIFSLGIKN----LGQDTKYGSSFIV  388 (438)
T ss_pred             HHHHHHcCHHHHH--HHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHcc----cchhhccchhHHh
Confidence            9999999999865  444444334443333333332 24455677888888755555544332    2344577777776


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHH
Q psy17194        410 ISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILY  446 (871)
Q Consensus       410 ~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~  446 (871)
                      + ..+|+.++|++.|.+.|..| .+..|++..+..+..
T Consensus       389 ~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~  425 (438)
T PRK10133        389 M-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVI  425 (438)
T ss_pred             H-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence            4 55789999999999999988 788887655444433

>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]

Probab=99.98  E-value=3.7e-29  Score=263.56  Aligned_cols=374  Identities=14%  Similarity=0.091  Sum_probs=300.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      ..++.+.+..|......+.....+|.. .+++|.|..++|...+.|.++..++.++...+.||+.||+++  ...+.++.
T Consensus        13 ~~l~aLa~~~F~igttEfv~~gLLp~i-A~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lL--l~~l~lFi   89 (394)
T COG2814          13 LALLALALAAFAIGTTEFVPVGLLPPI-AADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLL--LGLLALFI   89 (394)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHhchHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHH--HHHHHHHH
Confidence            345666777788888888888899884 566999999999999999999999999999999999999966  77888899


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        353 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       353 ~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ++.+++++++|++.+.+.|++.++..|...+.......+++   |+++|++++++...+..++..+|.+++.++-|.+||
T Consensus        90 ~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv---pp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW  166 (394)
T COG2814          90 VSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV---PPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW  166 (394)
T ss_pred             HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence            99999999999999999999999999998666666655554   559999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCc
Q psy17194        433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      |+.|+..+.+.++..+..+...+ +++...                       ..                         
T Consensus       167 R~~F~~ia~l~ll~~~~~~~~lP-~~~~~~-----------------------~~-------------------------  197 (394)
T COG2814         167 RATFLAIAVLALLALLLLWKLLP-PSEISG-----------------------SL-------------------------  197 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCC-CccCCC-----------------------CC-------------------------
Confidence            99999999888877665544322 000000                       00                         


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                                                                                               ..+....
T Consensus       198 -------------------------------------------------------------------------~~~~~~~  204 (394)
T COG2814         198 -------------------------------------------------------------------------PGPLRTL  204 (394)
T ss_pred             -------------------------------------------------------------------------CcchhHH
Confidence                                                                                     0000013


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHH
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  672 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~  672 (871)
                      .+++|+|.++...+..++.+.+.|..++++..++++..|+|....+++++..+++.++|+.++||+.|| +.++  ....
T Consensus       205 ~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~--~l~~  281 (394)
T COG2814         205 LRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR--ALIA  281 (394)
T ss_pred             HHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh--HHHH
Confidence            779999999999999999999999999999999999999999999999999999999999999999999 6666  5555


Q ss_pred             HHHHHhhHHhhhcch-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHH
Q psy17194        673 GLVLEGLCCFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  751 (871)
Q Consensus       673 g~~~~~~~l~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~  751 (871)
                      ...+.++.++.+.+. .+.+..+..++..++....   ..........+ .-++....+.++++...|+|.++|..++|.
T Consensus       282 ~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~---~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~  357 (394)
T COG2814         282 ALLLLALALLALTFTGASPALALALLFLWGFAFSP---ALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGL  357 (394)
T ss_pred             HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhh---hhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            555556666655543 3344444444445554333   22233444444 226889999999999999999999999999


Q ss_pred             hHhhhChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17194        752 IVDAIGFTALNFLIAFMNILYAPVLIYLKN  781 (871)
Q Consensus       752 l~~~~g~~~~~~~~a~~~~~~~~~~~~~~~  781 (871)
                      ++|++|+....++.+.+.+++..+.+...+
T Consensus       358 v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~  387 (394)
T COG2814         358 VLDALGYAATGWVGAALLLLALLLALLSAR  387 (394)
T ss_pred             HHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999888888766655443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.98  E-value=3.1e-29  Score=278.83  Aligned_cols=363  Identities=15%  Similarity=0.173  Sum_probs=271.9

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHH-HHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYL-RFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ++....++.........|+++.+. +++|.                           |+.++|++.+...+...+.++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~gl~~~~~~l~~~~~~~~~   66 (400)
T PRK11646         14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGW---------------------------AAVMVGIALGLRQFIQQGLGIFG   66 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------cHHHHHHHHHHHHHHHHHHHhhh
Confidence            445666777777788888888765 45544                           89999999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHH
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFIS  205 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~  205 (871)
                      |+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++.+...+
T Consensus        67 G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~  145 (400)
T PRK11646         67 GAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLI-RPHQRGRFFSLLMMQDS  145 (400)
T ss_pred             hHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999989999999999986 67899999999999999


Q ss_pred             HHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHH
Q psy17194        206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMA  285 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (871)
                      +|..+||.+++++. .+|||+.|++.++..++..++..++.|+.+++    +.+++...+.++.+++|.++......+..
T Consensus       146 ~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (400)
T PRK11646        146 AGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLS----TVRTPVREGMTRVLRDKRFVTYVLTLTGY  220 (400)
T ss_pred             HHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccc----ccchhhHHHHHHHHcCchHHHHHHHHHHH
Confidence            99999999999998 67999999998888777666555555542211    11112223456778888876655444433


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHHHHHhhcchhh
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK-LYPTYQWLMVAVGLVLEGLCCFIIPFSTSY  364 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (871)
                      .........+.|.|+++..+ ++.+.+++.+...++...+....+++.| |++.++.+  ..+..+.+++.+.++..++.
T Consensus       221 ~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~~~~l~~~~~~  297 (400)
T PRK11646        221 YMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRL--MAGLLIMSLSMFPIGMVSNL  297 (400)
T ss_pred             HHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH--HHHHHHHHHHHHHHHHhhhH
Confidence            33333345677888877655 6778888887777666655555566665 45555533  45555666666666666666


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC----hhhHHHHHH
Q psy17194        365 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG----FTALNFLIA  440 (871)
Q Consensus       365 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g----~~~~f~~~~  440 (871)
                      +.+.+..++.+++.+...+.....   ..+..|+++||+++|+.+....+|..+||.++|.+.|+.+    ....+++.+
T Consensus       298 ~~~~~~~~l~~~g~~~~~p~~~~~---~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~  374 (400)
T PRK11646        298 QQLFTLICLFYIGSIIAEPARETL---SASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLG  374 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHH---HHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHH
Confidence            666555666777776654333333   3344566999999999999999999999999999999853    244555544


Q ss_pred             HHHHHHHH
Q psy17194        441 FMNILYAP  448 (871)
Q Consensus       441 ~~~~~~~~  448 (871)
                      ++.++..+
T Consensus       375 ~~~~~~~~  382 (400)
T PRK11646        375 IIGLITLL  382 (400)
T ss_pred             HHHHHHHH
Confidence            44444433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.98  E-value=1e-28  Score=275.29  Aligned_cols=357  Identities=14%  Similarity=0.147  Sum_probs=266.4

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ....+..+..........+.+|.+.+++|.                           +..+.+++.+.+.++..++.++.
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------s~~~~~~~~~~~~~~~~~~~~~~   58 (392)
T PRK10473          6 LCSFALVLLYPAGIDMYLVGLPRIAADLNA---------------------------SEAQLHIAFSVYLAGMAAAMLFA   58 (392)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHHhH
Confidence            344455566667777777999999999866                           88999999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHH
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFIS  205 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~  205 (871)
                      |+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++.+....
T Consensus        59 G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~  137 (392)
T PRK10473         59 GKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTL-DDRRRAKVLSLLNGITC  137 (392)
T ss_pred             hHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999987 67899999999999999


Q ss_pred             HHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHH
Q psy17194        206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMA  285 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (871)
                      +|..++|.+++.+.+..+||+.|++.+++.++..++..+..+|.+++.+  +++.......++.++++.++.......+.
T Consensus       138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (392)
T PRK10473        138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARA--PAASSKPRENSESLLNRFFLSRLVITTLS  215 (392)
T ss_pred             HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCccc--CCccchHHHHHHHHhCHHHHHHHHHHHHH
Confidence            9999999999998888899999999998888877777666666543221  11112223445677888776655544444


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhH
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQ  365 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (871)
                      ......+..+.|.++++++|.++.+.+...+...++.+++.++.+++.||+|+|+.+  ..+..+..++.+......+.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~--~~~~~~~~~~~~~~~~~~~~~  293 (392)
T PRK10473        216 VTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM--LTSQVLFLAAGITLALSPSHA  293 (392)
T ss_pred             HHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence            444444555667778888899999999999889999999999999999999998855  555555555555554444444


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccch-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHH
Q psy17194        366 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVY-GSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMN  443 (871)
Q Consensus       366 ~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~r-g~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~  443 (871)
                      ..+....+.+.|.+...+.  .....+.+   .++| |.+.    ....++..+++.+++++.+..|+.....+.+...
T Consensus       294 ~~~~~~~l~~~g~~~~~~~--~~~~~~~~---~~~~~g~~~----~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~  363 (392)
T PRK10473        294 VSLFGITLICAGFSVGFGV--AMSQALGP---FSLRAGVAS----STLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI  363 (392)
T ss_pred             HHHHHHHHHHHHHHHHhHH--HHHHHhcc---CcccccHHH----HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence            3333334444444433221  11122222   2333 3343    4455677788888888888888876555544433

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.98  E-value=9e-30  Score=264.02  Aligned_cols=379  Identities=15%  Similarity=0.105  Sum_probs=308.5

Q ss_pred             cccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHH
Q psy17194         39 SQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQ  118 (871)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~  118 (871)
                      ..+++.+.+..++..++.+...+..++.+.+.+++|.                           |+.|.+++.++..+..
T Consensus        10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L---------------------------S~~q~~ll~aiPil~G   62 (417)
T COG2223          10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL---------------------------SEGQKGLLVAIPILVG   62 (417)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC---------------------------CHHHHHHHHHHHHHHh
Confidence            3455677778888888888888888888888877765                           9999999999999999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR---SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      .+..++.|.+.||+|.|++..++.++..+.++..+++.   +++++++.+++.|++.+.+ ....+.++.+| |||++|.
T Consensus        63 allRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~f-P~~~qG~  140 (417)
T COG2223          63 ALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFF-PKEKQGL  140 (417)
T ss_pred             HHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccccee-hcccccccccC-ChhhhhH
Confidence            99999999999999999999999999999999999985   4559999999999998865 56689999998 6789999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHhhhC---ChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcc
Q psy17194        196 ALGIALAFISFGCLVAPPFGGALYQFAG---KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD  272 (871)
Q Consensus       196 ~~g~~~~~~~~G~~lg~~l~~~l~~~~g---wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (871)
                      ++|++. ..++|..+...++..+....+   ||....+..+..++..+..++...+.++.+...++..  +...+.++++
T Consensus       141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~--~~~~~~v~~~  217 (417)
T COG2223         141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL--PAQLKAVFSN  217 (417)
T ss_pred             HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc--hhHHHHHhcC
Confidence            999999 999999999999999999889   9999999999988888899999888777522221111  1556778889


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +..|.+...++....++..+..++|.|++++|+.++.++|.....+.+...+.++.+|+++||+|.+|+.  ......+.
T Consensus       218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~--~~~f~~~~  295 (417)
T COG2223         218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT--LAVFVGMA  295 (417)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH--HHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999966  33444444


Q ss_pred             HHHHHhhcc-------hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        353 LCCFIIPFS-------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  425 (871)
Q Consensus       353 ~~~~~~~~~-------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~  425 (871)
                      ++.......       .+....+...+..++..+..    ....-.+++.+.+++.|.+.|+....+.+|+..-|...|.
T Consensus       296 ~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~G----nGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~  371 (417)
T COG2223         296 LAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLG----NGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGV  371 (417)
T ss_pred             HHHHHHHccccccccCcchHHHHHHHHHHHHHhccC----cchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHH
Confidence            444443332       22333333233333333333    2222234454556788999999999999999999999999


Q ss_pred             HHhhhC-hhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        426 IVDAIG-FTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       426 l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      ..+..| +...|+++..+.+++.+..+....
T Consensus       372 ~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~  402 (417)
T COG2223         372 SLDLTGSYTGAFMLLLAFYLVALVLTWALYA  402 (417)
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999998 888999988888877766555443

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.97  E-value=6.8e-29  Score=275.41  Aligned_cols=370  Identities=16%  Similarity=0.125  Sum_probs=275.3

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ..++++.++..++...+...++.+.++++.                           ++.+.+++.+.+.+++.++.+++
T Consensus         6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~~~~~~~~~l~~~l~~~~~   58 (393)
T PRK11195          6 YAIMAAQFFSALADNALLFAAIALLKELHY---------------------------PDWSQPLLQMFFVLAYIVLAPFV   58 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------cHHHHHHHHHHHHHHHHHHHhhh
Confidence            456777888787666666666677777754                           78899999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHH
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFIS  205 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~  205 (871)
                      |+++||+|||++++++.++.+++.+++.++.+.   ++.|+++|++.+...|+..+++.|++ |+++|++++++.+....
T Consensus        59 G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~-~~~~~~~a~~~~~~~~~  134 (393)
T PRK11195         59 GAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL-PGEKLVKANGWMEGSTI  134 (393)
T ss_pred             hHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence            999999999999999999999998888777664   78899999999999999999999997 67899999999999999


Q ss_pred             HHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc-----ccchhhhhcchhHHHHHH
Q psy17194        206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS-----TVPIWKLFMDPYIAVCSG  280 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  280 (871)
                      +|.++||.++|++.+. .|+..+++.+...++. ++..+..|+.+++.++.+.+...     ....+.++++|.+.....
T Consensus       135 ~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  212 (393)
T PRK11195        135 AAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLA  212 (393)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHH
Confidence            9999999999999886 4888887776555443 33344555543221111110000     112345677777665554


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      ...+...........++.|+++.+|.++.+.|++.+...++.+++.+..+++.||.++++..  ..+. +.++..+...+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~--~~g~-~~~~~~~~~~~  289 (393)
T PRK11195        213 GTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL--PAGI-LMGLVVLLMAL  289 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH--HHHH-HHHHHHHHHHH
Confidence            44444444555566677888888999999999999999999999999999999999888744  4443 33343444445


Q ss_pred             chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH
Q psy17194        361 STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV-YGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  439 (871)
Q Consensus       361 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~-rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~  439 (871)
                      .++.+...+..++.|++.+...+...+..++   ..|++. +|++.++.+...+++..++..+.+.+ +..|-+..+++.
T Consensus       290 ~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~---~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  365 (393)
T PRK11195        290 QHSLLPAYPLLILIGALGGFFVVPMNALLQH---RGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIV  365 (393)
T ss_pred             HhHHHHHHHHHHHHHHhhhhhhhhHHHHHHh---hCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHH
Confidence            5566655566667788777764444444333   223343 69999999999999999999999955 678988888877


Q ss_pred             HHHHHHHHHHHHHHhh
Q psy17194        440 AFMNILYAPVLIYLKN  455 (871)
Q Consensus       440 ~~~~~~~~~~~~~~~~  455 (871)
                      ++..++...+.+..+.
T Consensus       366 ~~~~~~~~~~~~~~~~  381 (393)
T PRK11195        366 GFGLLVALAMALLWRW  381 (393)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            7666665555444443

>PRK10054 putative transporter; Provisional

Probab=99.97  E-value=4.4e-29  Score=277.13  Aligned_cols=366  Identities=13%  Similarity=0.099  Sum_probs=279.0

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      +..+.+..++.....+...|.+|.+.+ ++|.                           +..++|++.+.+.+++.++++
T Consensus         9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~---------------------------s~~~~g~~~s~~~~~~~~~~~   61 (395)
T PRK10054          9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSL---------------------------SVDLIGYAMTIALTIGVVFSL   61 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence            445666777788888888899988775 4554                           899999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      +.|+++||+|||++++++.++.+++.++.+++++++.+++.|.+.|.+.+...+...++..|.+ |+++|++++++.+..
T Consensus        62 ~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~  140 (395)
T PRK10054         62 GFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNL-SSTSKTKIFSLNYTM  140 (395)
T ss_pred             HHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999888888888999999986 668999999999999


Q ss_pred             HHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHH
Q psy17194        204 ISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL  283 (871)
Q Consensus       204 ~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (871)
                      .++|.++||.+++++.+ .+|+.+|++.+++.++..++..++.++.+++.+++   ++...+.++.+|+|.++......+
T Consensus       141 ~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  216 (395)
T PRK10054        141 LNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE---TGSVWSPSVLLQDKALLWFTCSGF  216 (395)
T ss_pred             HHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccccccc---hhhhhhhhhhccCceehHHHHHHH
Confidence            99999999999999875 69999999988887776665555554432211111   111123366788888877776666


Q ss_pred             HHHHHHHHHHHHHHHHHHHh--hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc
Q psy17194        284 MANVALAFLEPTISLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS  361 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (871)
                      +..........+.+.|+.+.  .+.+....+.+.....+.....+...+++.||.++|+.+  ..++.+..++...+.+.
T Consensus       217 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~  294 (395)
T PRK10054        217 LASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM--TAGTLCFVIGLVGFIFS  294 (395)
T ss_pred             HHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH--HHHHHHHHHHHHHHHHc
Confidence            66666555555666665433  345566677777777777777788889999999988855  55555556665555443


Q ss_pred             -hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHH
Q psy17194        362 -TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIA  440 (871)
Q Consensus       362 -~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~  440 (871)
                       ++.+.+.+...+.++|.+...+.......   +..|++.++++.+..+ ...+|.++||.++|.+.|+.|+...|++.+
T Consensus       295 ~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~---~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~  370 (395)
T PRK10054        295 GNSLLLWGMSAAVFTVGEIIYAPGEYMLID---HIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILA  370 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhHHHHHH---HhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHH
Confidence             45655666677778887765443333333   3345588899988765 566899999999999999999988888766


Q ss_pred             HHHHHHHH
Q psy17194        441 FMNILYAP  448 (871)
Q Consensus       441 ~~~~~~~~  448 (871)
                      .+..+...
T Consensus       371 ~~~~~~~~  378 (395)
T PRK10054        371 LAIVAAWL  378 (395)
T ss_pred             HHHHHHHH
Confidence            55444433

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.97  E-value=9.6e-30  Score=282.37  Aligned_cols=355  Identities=11%  Similarity=0.081  Sum_probs=272.4

Q ss_pred             HHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhh
Q psy17194         51 ALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALID  130 (871)
Q Consensus        51 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D  130 (871)
                      +++...++.....+.+|.+.+++|.                           ++.+.|++.+++.++..++.++.|+++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~~~~~~~g~l~d   55 (379)
T TIGR00881         3 GYAAYYLVRKNFALAMPYLVEEIGL---------------------------SKTDLGLLLSSFSIAYGISKFVMGSVSD   55 (379)
T ss_pred             hhhHHHHhHHhhhhhhHHHHHHhCC---------------------------CHhHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence            4556677788888889999888866                           8899999999999999999999999999


Q ss_pred             hhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHH
Q psy17194        131 RIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLV  210 (871)
Q Consensus       131 r~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~l  210 (871)
                      |+|||++++.+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++.+....+|..+
T Consensus        56 r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~  134 (379)
T TIGR00881        56 RSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWF-SRSERGTWVSFWNCSHNVGGGL  134 (379)
T ss_pred             hhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhc-CHhhheeeEeehhccchhHHHH
Confidence            999999999999999999999999999999999999999999999999999999997 6789999999999999999999


Q ss_pred             hH-HHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC------CC-------C-----Ccccchhhhhc
Q psy17194        211 AP-PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK------PE-------S-----HSTVPIWKLFM  271 (871)
Q Consensus       211 g~-~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~------~~-------~-----~~~~~~~~~~~  271 (871)
                      ++ .+++.+.+..+||+.|++.+++.++..++.+++.++.+++.+.++      ++       +     ......++.++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (379)
T TIGR00881       135 LPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLL  214 (379)
T ss_pred             HHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHh
Confidence            99 577777788899999999988887777776666665443211000      00       0     00112345677


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC-chhHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP-TYQWLMVAVGLVL  350 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-~~~~~~~~~~~~~  350 (871)
                      +|.++...+..++..........+.|.|+++.+|.+..+.+...+...++.+++.++.+++.||.. +|+..........
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~  294 (379)
T TIGR00881       215 NKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMAL  294 (379)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHH
Confidence            888888777777777777788889999999989999999999999999999999999999999863 3332221222222


Q ss_pred             HHHHHHHhhc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        351 EGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       351 ~~~~~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      ..++......  ..+.....+..++.++......   ........+..|+++||++.|+.+....+|..++|.+.|.+.|
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~  371 (379)
T TIGR00881       295 IIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ---MLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD  371 (379)
T ss_pred             HHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhh---HHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence            2222222222  2233333333333443322221   1122233455667999999999999999999999999999999


Q ss_pred             hhChhhHH
Q psy17194        429 AIGFTALN  436 (871)
Q Consensus       429 ~~g~~~~f  436 (871)
                      ..||++.|
T Consensus       372 ~~g~~~~f  379 (379)
T TIGR00881       372 GFGWAGAF  379 (379)
T ss_pred             hhcccccC
Confidence            99998754

>PRK15075 citrate-proton symporter; Provisional

Probab=99.97  E-value=1.4e-28  Score=277.23  Aligned_cols=359  Identities=16%  Similarity=0.116  Sum_probs=247.4

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHH-HHH-----
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVL-FAS-----  113 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~-~s~-----  113 (871)
                      .|++.....+++.+++.++...+.+..|.+.++++.                           ++.+.+.+ .+.     
T Consensus        12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~---------------------------~~~~~~~~~~~~~~~~~   64 (434)
T PRK15075         12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP---------------------------AGNEFASLMLTFAVFGA   64 (434)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CCCchHHHHHHHHHHHH
Confidence            345567888999999999999999999999999865                           34443332 222     


Q ss_pred             HHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHhhhhhhhhhHHHHhhc
Q psy17194        114 KAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYG--------VLFFARSLQGVGSAFADTSGLAMIAD  185 (871)
Q Consensus       114 ~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~--------~l~~~r~l~G~~~g~~~~~~~a~i~~  185 (871)
                      ..++..+++++.|+++||+|||++++.+.++++++.++++++++++        .++++|+++|++.+...+...++++|
T Consensus        65 ~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e  144 (434)
T PRK15075         65 GFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAE  144 (434)
T ss_pred             HHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHh
Confidence            2333356889999999999999999999999999999999999987        46889999999999999988999999


Q ss_pred             ccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHH--------hhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        186 RFTEENERSQALGIALAFISFGCLVAPPFGGALY--------QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  257 (871)
Q Consensus       186 ~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~--------~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  257 (871)
                      ++ |+++|++++++.....++|..+|+.+++.+.        +.+|||++|++..+...+ ........||.++..+++ 
T Consensus       145 ~~-p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~-  221 (434)
T PRK15075        145 IA-TPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEEFLARK-  221 (434)
T ss_pred             hC-CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHHHHHhh-
Confidence            97 6689999999999999999988888887763        467999999985543222 111111222221111111 


Q ss_pred             CCCCcccchhhhhcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc
Q psy17194        258 PESHSTVPIWKLFMDPYIAVC-SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY  336 (871)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~  336 (871)
                      ++.+.....++..+++..+.. ....++..........+.|.|+++.+|++..+.++......++.+++.++.|+++||+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~  301 (434)
T PRK15075        222 HRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI  301 (434)
T ss_pred             hccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            111111112233444444333 2333334445566778899999988899998888888888889999999999999999


Q ss_pred             CchhHHHHHHHHHHHHH-HHHH---hhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHH-
Q psy17194        337 PTYQWLMVAVGLVLEGL-CCFI---IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS-  411 (871)
Q Consensus       337 g~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~-  411 (871)
                      |||+.+.  .+..+..+ ....   ....++........++.+++.+...+...   ....+..|++.|+++.++.+.. 
T Consensus       302 g~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~~~e~~p~~~rg~~~g~~~~~~  376 (434)
T PRK15075        302 GRRPVLI--AFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMV---VALTEVMPAEVRTAGFSLAYSLA  376 (434)
T ss_pred             cchHHHH--HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHH---HHHHHHCCCCccchheeHHHHHH
Confidence            9998653  22222111 1111   11122332232323334455554433223   3344556779999999996544 


Q ss_pred             HHHHHHHHHHHHHHHHhhhChh
Q psy17194        412 YSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       412 ~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      ..+++.++|.+.|++.|..|++
T Consensus       377 ~~~~g~~~p~~~g~i~~~~g~~  398 (434)
T PRK15075        377 TAIFGGFTPAISTWLIHVTGDK  398 (434)
T ss_pred             HHHHhhhHHHHHHHHHHhcCCc
Confidence            4446888999999999998864

>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]

Probab=99.97  E-value=7.3e-30  Score=263.69  Aligned_cols=375  Identities=13%  Similarity=0.039  Sum_probs=285.4

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFG  377 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g  377 (871)
                      +.+.++.++|..+.|++.+.+.+.+.++-.+.|.++||.+.|+  .+..++++.++..++++++++.+.+.+...+.|..
T Consensus        53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~--fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~f  130 (448)
T COG2271          53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY--FMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWF  130 (448)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce--eehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            4567778899999999999999999999999999999999998  44899999999999999999999999999999999


Q ss_pred             HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH--HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        378 MALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA--GGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~--g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .|...|.....   +..-+++++||+..+++|+..++|+++.|++.  +.+.++.+|+..|++-++++++..++.++..+
T Consensus       131 Qg~Gwpp~~~~---i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r  207 (448)
T COG2271         131 QGMGWPPCART---ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR  207 (448)
T ss_pred             hcCCCcHHHHH---HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence            99885555444   44456679999999999999999999999999  99999999999999999988887776666554


Q ss_pred             cccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCc
Q psy17194        456 IYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPP  535 (871)
Q Consensus       456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  535 (871)
                      .+.++.--++.++.++|+.+..        .+++        +                +                    
T Consensus       208 d~Pqs~GLP~ie~~~~d~~e~~--------~~~~--------~----------------~--------------------  235 (448)
T COG2271         208 DRPQSEGLPPIEEYRGDPLEIY--------EEEK--------E----------------N--------------------  235 (448)
T ss_pred             CCccccCCCCHHHhhcCchhhh--------hhhc--------c----------------C--------------------
Confidence            3222211111111111100000        0000        0                0                    


Q ss_pred             cccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHH
Q psy17194        536 ETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVAL  615 (871)
Q Consensus       536 ~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  615 (871)
                                                                     ++.....+-.+.+++||.+|..+++..+.+..=
T Consensus       236 -----------------------------------------------~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR  268 (448)
T COG2271         236 -----------------------------------------------EGLTAWQIFVKYVLKNKLIWLLALANVFVYVVR  268 (448)
T ss_pred             -----------------------------------------------CCccHHHHHHHHHHcChHHHHHHHHHHHHHHHH
Confidence                                                           000000011367999999999999999999999


Q ss_pred             HHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC-chhhHHHHHHHHHHhhHHhhh--cchhhhHH
Q psy17194        616 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP-TYQWLMVAVGLVLEGLCCFII--PFSTSYQM  692 (871)
Q Consensus       616 ~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~-~~~~~~~~~g~~~~~~~l~~~--~~~~~~~~  692 (871)
                      |++.-|.|+|+.|..|+|..+++..++..=++.+.|++++|+++||.- .||.....+.++...+++..+  ..+.+.+.
T Consensus       269 ~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l  348 (448)
T COG2271         269 YGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLL  348 (448)
T ss_pred             HHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHH
Confidence            999999999999999999999999999999999999999999999975 334334444444444444444  33344555


Q ss_pred             HHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHH-HHhHhhhhHHHhHhhhChHHHHHHHHHHHHH
Q psy17194        693 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-AYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  771 (871)
Q Consensus       693 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~-g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~  771 (871)
                      ..+.++.+|+......   +-+-....|..|++..|+|.|+...+.++ |.+.+-...|++.|.+||...|.+..+.+++
T Consensus       349 ~~~~l~~iGf~IyGPq---mLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l  425 (448)
T COG2271         349 DAILLFIIGFLIYGPQ---MLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALL  425 (448)
T ss_pred             HHHHHHHHHHHHhhHH---HHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHH
Confidence            5666666666555433   33444455666789999999999999999 8899999999999999999999888877777


Q ss_pred             HHHHHHHH
Q psy17194        772 YAPVLIYL  779 (871)
Q Consensus       772 ~~~~~~~~  779 (871)
                      +.+.++..
T Consensus       426 ~~lll~~~  433 (448)
T COG2271         426 AILLLLPV  433 (448)
T ss_pred             HHHHHHHH
Confidence            76554444

>PRK09952 shikimate transporter; Provisional

Probab=99.97  E-value=3.8e-28  Score=273.59  Aligned_cols=379  Identities=13%  Similarity=0.091  Sum_probs=261.5

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHH-----HHHH
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLF-----ASKA  115 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~-----s~~~  115 (871)
                      ++.+...+++.+++.++...+..+.|.+.. ++--                         +.++. .+++.     ++..
T Consensus        21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------------------------~~~~~-~~~~~~~~~~~~~~   74 (438)
T PRK09952         21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFP-------------------------QVSPA-MGTLAAFATFGVGF   74 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------------CCCcH-HHHHHHHHHHHHHH
Confidence            456667788899999999998877775544 4310                         11333 34442     4556


Q ss_pred             HHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHhhhhhhhhhHHHHhhccc
Q psy17194        116 IVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYG--------VLFFARSLQGVGSAFADTSGLAMIADRF  187 (871)
Q Consensus       116 l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~--------~l~~~r~l~G~~~g~~~~~~~a~i~~~~  187 (871)
                      ++..+++++.|+++||+|||++++.+.+++++++++++++++++        .++++|+++|++.|..++...+++.|++
T Consensus        75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~  154 (438)
T PRK09952         75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA  154 (438)
T ss_pred             HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence            77889999999999999999999999999999999999999987        5888999999999999999999999986


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh--------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc--CC
Q psy17194        188 TEENERSQALGIALAFISFGCLVAPPFGGALYQ--------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ--KK  257 (871)
Q Consensus       188 ~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~--------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~--~~  257 (871)
                       |+++|++..+..+.+..+|.+++..+...+..        .+|||++|++.+++.++. +......||.++..+.  +.
T Consensus       155 -p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~  232 (438)
T PRK09952        155 -PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQ  232 (438)
T ss_pred             -CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhc
Confidence             66899999999999999999999887776653        479999999887765442 2223334454432111  11


Q ss_pred             CCCCcccch-hhhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh
Q psy17194        258 PESHSTVPI-WKLFMDPYIAVCSG-ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL  335 (871)
Q Consensus       258 ~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr  335 (871)
                      ++.+...+. ..++++++.+.... ..++.....+....+.|.|+++.+|.+......+.....+...++.++.|+++||
T Consensus       233 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr  312 (438)
T PRK09952        233 AAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADR  312 (438)
T ss_pred             ccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111122 23556666555433 3444455566677888999988889888765555555567778888999999999


Q ss_pred             cCchhHHHHHHHHHHHHHHHHHh--hc-c-hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHH
Q psy17194        336 YPTYQWLMVAVGLVLEGLCCFII--PF-S-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS  411 (871)
Q Consensus       336 ~g~~~~~~~~~~~~~~~~~~~~~--~~-~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~  411 (871)
                      +|||+.+  ..+.++..++.+.+  .. . ++.+.+++..++.+++.+...+...+.   ..+.+|.+.|+++.++.+..
T Consensus       313 ~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~e~~p~~~r~tg~g~~~~~  387 (438)
T PRK09952        313 FGRRRVY--ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPM---FTEMFGASYRYSGAGVGYQV  387 (438)
T ss_pred             hCchHHH--HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCcchhHHHHhHHHHH
Confidence            9999865  33333322222211  11 1 223333334444556655553333333   34455668999999986554


Q ss_pred             -HHHHHHHHHHHHHHHHhhh--ChhhHHHHHHHHHHHHHHHHHHH
Q psy17194        412 -YSLAYAIGPIVAGGIVDAI--GFTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       412 -~~lg~~igp~l~g~l~~~~--g~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                       ..+++.++|.+.+++.+..  +|...+.+.+++.+++.+..+..
T Consensus       388 ~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~  432 (438)
T PRK09952        388 ASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM  432 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence             5589999999999999865  37777777777777666665544

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.97  E-value=5.1e-28  Score=269.11  Aligned_cols=369  Identities=16%  Similarity=0.141  Sum_probs=260.2

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ..+.+..++..+......|.+|.+.. ++|.                           +++++|++.+...+...+.+++
T Consensus        18 ~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~---------------------------s~~~~g~~~~~~~~~~~~~~~~   70 (393)
T PRK15011         18 TAFLIVAFLTGIAGALQTPTLSIFLTDEVHA---------------------------RPAMVGFFFTGSAVIGILVSQF   70 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence            34556677888888888899998764 5544                           8899999988776655555555


Q ss_pred             hhHhhhhhCCchHH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhH--HHHHHHHH
Q psy17194        125 SGALIDRIGYDLPM-MIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENER--SQALGIAL  201 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l-~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r--~~~~g~~~  201 (871)
                      .|.++||+||||.+ +.+.++.+++..+.+++++++.+++.+.+.|...+...|...+++.++. ++++|  +...++.+
T Consensus        71 ~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  149 (393)
T PRK15011         71 LAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHA-DKTGREAVMFSSFLR  149 (393)
T ss_pred             HHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh-hhccchHHHHHHHHH
Confidence            55559999999875 5566666778888889999998877665555555567888888888864 43434  34558889


Q ss_pred             HHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcc-hhHHHHHH
Q psy17194        202 AFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD-PYIAVCSG  280 (871)
Q Consensus       202 ~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  280 (871)
                      .+.++|.++||++++.+.+++|||..|++.++..++..++.++..||.+++.+++++   +...   ..++ +..+....
T Consensus       150 ~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~  223 (393)
T PRK15011        150 AQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG---TLEA---PRRNRRDTLLLFV  223 (393)
T ss_pred             HHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc---cccc---cccccccHHHHHH
Confidence            999999999999999999999999999999988888777777777765432211111   1011   1122 22233333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      ...........+..+.|.|+++.+|.++.+.+++.+...++.+++.++.|+++||+++|+.+  ..+.....+.......
T Consensus       224 ~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~--~~~~~~~~~~~~~~~~  301 (393)
T PRK15011        224 ICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM--RVAAVAGVCFYAGMLM  301 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH--HHHHHHHHHHHHHHHH
Confidence            33333444555667788899888999999999888777777888999999999999999854  3343333333333334


Q ss_pred             chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHH
Q psy17194        361 STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIA  440 (871)
Q Consensus       361 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~  440 (871)
                      .++.+..++.+++.+++.+...+......   .+.. ++++|+++++.+...++|..++|.++|.+.|..||+..|++.+
T Consensus       302 ~~~~~~~l~~~~l~~~~~g~~~~~~~~~~---~~~~-p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~  377 (393)
T PRK15011        302 AHSPAILLGLQLLNAIYIGILGGIGMLYF---QDLM-PGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFAL  377 (393)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            45555555555555555555433332222   2333 3569999999999999999999999999999999999998887


Q ss_pred             HHHHHHHHHHHHHh
Q psy17194        441 FMNILYAPVLIYLK  454 (871)
Q Consensus       441 ~~~~~~~~~~~~~~  454 (871)
                      ++.++.+++.++.+
T Consensus       378 ~~~~~~~~~~~~~~  391 (393)
T PRK15011        378 VMIIATLFCLLRIK  391 (393)
T ss_pred             HHHHHHHHHHHhhc
Confidence            77777666655443

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.97  E-value=3.5e-28  Score=266.27  Aligned_cols=372  Identities=10%  Similarity=0.073  Sum_probs=273.5

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      ++.+....++.++......+..|+.+.+.+ ++|.                           |++|.+++.+++.+++.+
T Consensus        33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l---------------------------s~~q~g~l~ai~~l~~al   85 (462)
T PRK15034         33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF---------------------------TTDQLFLLTALPSVSGAL   85 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            457777888888889999999998888876 6655                           999999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG-----RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-----~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      +.++.|++.||+|.|+++.++.++.++.+++++++     +|++.+++.|++.|++ +..++.....+++++ |+++||+
T Consensus        86 ~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf-p~~~rG~  163 (462)
T PRK15034         86 LRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF-PKAKQGS  163 (462)
T ss_pred             HHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC-CHhHhHH
Confidence            99999999999999999999999999999999987     8999999999999998 667888899999998 6789999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHH-----h-------------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        196 ALGIALAFISFGCLVAPPFGGALY-----Q-------------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  257 (871)
Q Consensus       196 ~~g~~~~~~~~G~~lg~~l~~~l~-----~-------------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  257 (871)
                      ++|+.....++|..+++++...+.     +             ..+||.++++..++.++..++.+++.++.++      
T Consensus       164 A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------  237 (462)
T PRK15034        164 ALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS------  237 (462)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------
Confidence            999998777777776666554433     2             2347777778777777777777776554332      


Q ss_pred             CCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC
Q psy17194        258 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  337 (871)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g  337 (871)
                       ++....+..+.+|+|..|.+...+++....+..+..++|.|+++.++  ............+...+.++++|+++||+|
T Consensus       238 -~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRiG  314 (462)
T PRK15034        238 -SRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKFG  314 (462)
T ss_pred             -cccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence             12234556779999999999999988888888888899999888663  222222233445778888999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHH--hhcc----hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc---c------------
Q psy17194        338 TYQWLMVAVGLVLEGLCCFI--IPFS----TSYQMLMLPICGICFGMALVDTALLPTLGYLVDV---R------------  396 (871)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~---~------------  396 (871)
                      ++|++  ..+.....++...  ....    .+.+...+..+...++.|..++...-++....+.   +            
T Consensus       315 ~~~vl--~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~  392 (462)
T PRK15034        315 GVRVT--LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA  392 (462)
T ss_pred             chHHH--HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHH
Confidence            99865  3333333332211  1111    2334333333333333333322233333332221   0            


Q ss_pred             ---cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHHHH
Q psy17194        397 ---YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       397 ---~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                         .+++.|.+.|+.+....+|+++-|.+.|...+..| +...|+.+.+..++++.+.++.
T Consensus       393 ~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~  453 (462)
T PRK15034        393 QREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV  453 (462)
T ss_pred             hhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence               01256889999999999999999999999998876 7788888887777776665543

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.97  E-value=1.5e-28  Score=269.61  Aligned_cols=346  Identities=23%  Similarity=0.370  Sum_probs=300.7

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      .+.+..+...++.....+..|.+.+++|.                           +..+.+++.+...++..++.++.|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~g   55 (352)
T cd06174           3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL---------------------------SASQAGLIVSAFSLGYALGSLLAG   55 (352)
T ss_pred             HHHHHHHHHHHhhhhhHhhHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHHhHH
Confidence            45566778888888889999999988765                           889999999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISF  206 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~  206 (871)
                      +++||+|||+.+..+.++..++.+++.+.++++.+++.|++.|++.+...+...+++.|++ |+|+|++.+++.+....+
T Consensus        56 ~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  134 (352)
T cd06174          56 YLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWF-PPKERGRALGLFSAGFGL  134 (352)
T ss_pred             HHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhC-CccchhhhhhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999987 668999999999999999


Q ss_pred             HHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHH
Q psy17194        207 GCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  286 (871)
Q Consensus       207 G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (871)
                      |..+++.+++.+.+..+||+.|++.+++.++..+...+..                          |.++......++..
T Consensus       135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~  188 (352)
T cd06174         135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL--------------------------RLLLLLALAFFLLS  188 (352)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------------------------HHHHHHHHHHHHHH
Confidence            9999999999999998999999999988887766655442                          55666667777777


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchh-HHHHHHHHHHHHHHHHHhhcchhhH
Q psy17194        287 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ-WLMVAVGLVLEGLCCFIIPFSTSYQ  365 (871)
Q Consensus       287 ~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  365 (871)
                      ........+.+.+.++.+|.+..+.+.......++..++.++.+++.||+++|+ .+  ..+..+..++.+.....++.+
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~  266 (352)
T cd06174         189 FGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL--LIGLLLAALGLLLLALAPSLA  266 (352)
T ss_pred             hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHHHHHHHHHHHHHhccHH
Confidence            788888889999998878999999999999999999999999999999999887 65  556667777777777777777


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHH
Q psy17194        366 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  445 (871)
Q Consensus       366 ~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~  445 (871)
                      ..++..++.+++.+...+.......+   ..|+++|++.+++.+....++..++|.+.|.+.+..+|+..+++.+++.++
T Consensus       267 ~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i  343 (352)
T cd06174         267 LLLVALLLLGFGLGFAFPALLTLASE---LAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALL  343 (352)
T ss_pred             HHHHHHHHHHHHHhccchhHHHHHHh---hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHH
Confidence            77777888888888775544444444   445599999999999999999999999999999999999999999888877


Q ss_pred             HHHHHH
Q psy17194        446 YAPVLI  451 (871)
Q Consensus       446 ~~~~~~  451 (871)
                      ..+..+
T Consensus       344 ~~i~~~  349 (352)
T cd06174         344 AALLLL  349 (352)
T ss_pred             HHHHhe
Confidence            665543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.97  E-value=1e-28  Score=278.82  Aligned_cols=382  Identities=10%  Similarity=0.038  Sum_probs=274.5

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      +..+....+.+..............|.+.+ +|.                           ++.+.|++.+++.++..++
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~---------------------------s~~~~g~~~~~~~~~~~~~   77 (438)
T TIGR00712        26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF---------------------------SKGELGFALSAISIAYGFS   77 (438)
T ss_pred             HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC---------------------------CHhHhHHHHHHHHHHHHHh
Confidence            444555556666666666666666676554 454                           8899999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG----RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a----~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      .++.|+++||+|||+++..+.++.+++.+++++.    ++++.+.+.|++.|++.+...+.....+.|++ |+++|++++
T Consensus        78 ~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~-~~~~rg~~~  156 (438)
T TIGR00712        78 KFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWW-SQSERGTIV  156 (438)
T ss_pred             hhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhc-CcccchhHH
Confidence            9999999999999999999999999998887764    46778889999999999999888899999987 668999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHH-hhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc------CCC-------CCCcc
Q psy17194        198 GIALAFISFGCLVAPPFGGALY-QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ------KKP-------ESHST  263 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~-~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~------~~~-------~~~~~  263 (871)
                      ++++.+.++|..+++.+.+.+. +..+||..|++.++++++..++.+++.+|.++..+.      +.+       +.+..
T Consensus       157 ~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (438)
T TIGR00712       157 SIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQE  236 (438)
T ss_pred             HHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccc
Confidence            9999999999999988776544 456899999999998888777777777765542110      000       00000


Q ss_pred             cch-----hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCc
Q psy17194        264 VPI-----WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT  338 (871)
Q Consensus       264 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~  338 (871)
                      .+.     +..+|++.++......++..........++|.|+++..|.++.+.++....+.++.+++.+++|+++||+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~  316 (438)
T TIGR00712       237 LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFK  316 (438)
T ss_pred             cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            011     135778888887777666666667778899999998889999999999988899999999999999999964


Q ss_pred             hhHHHHHHHHH-HHHHHHHHhhc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHH
Q psy17194        339 YQWLMVAVGLV-LEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA  415 (871)
Q Consensus       339 ~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg  415 (871)
                      ++......... ...++.+.+..  ..+.+......++.+++  ...+. ........+..|++.||++.|+.+....+|
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g  393 (438)
T TIGR00712       317 GNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL--IYGPV-MLIGLHALELAPKKAAGTAAGFTGLFGYLG  393 (438)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH--HccHH-HHHHHHHHHhcChhheeeehhhhchHHHhh
Confidence            43211111111 11122222111  12333222222333332  21111 111122345567789999999999888877


Q ss_pred             H-HHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        416 Y-AIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       416 ~-~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      + +++|.+.|.+.|+.||...|++..++.+++.+..+.+.+
T Consensus       394 g~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  434 (438)
T TIGR00712       394 GSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI  434 (438)
T ss_pred             hhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence            4 689999999999999999999888777766666555544

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.97  E-value=3.3e-29  Score=275.16  Aligned_cols=339  Identities=25%  Similarity=0.399  Sum_probs=261.8

Q ss_pred             HHHHHHHHhhhhhhcccch-hHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhH
Q psy17194         49 STALLLDNMLYMVIVPIIP-DYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA  127 (871)
Q Consensus        49 ~~~~~~~~~~~~~~~~~l~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~  127 (871)
                      +++.++..+......+.+| .+.+++|.                           ++.++|++.+++.++..+++++.|+
T Consensus         2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~~~~~~~~~~~~~~~~~~~g~   54 (352)
T PF07690_consen    2 FLAFFLSGFGFSIISPALPLYLAEELGL---------------------------SPSQIGLLFSAFFLGSALFSPFAGY   54 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-HHHCCSTT---------------------------TSHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHccCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5667778888888888998 66666654                           8899999999999999999999999


Q ss_pred             hhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHH
Q psy17194        128 LIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFG  207 (871)
Q Consensus       128 l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G  207 (871)
                      ++||+|||+++..+.++.+++.++..++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++.+...++|
T Consensus        55 l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~g  133 (352)
T PF07690_consen   55 LSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWF-PPEERGRAFGILSAGFSLG  133 (352)
T ss_dssp             HHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccc-hhhhhhhccccccchhhhh
Confidence            999999999999999999999777767788889999999999999999999999999997 5689999999999999999


Q ss_pred             HHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC------cccc-hhhhhcchhHHHHHH
Q psy17194        208 CLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH------STVP-IWKLFMDPYIAVCSG  280 (871)
Q Consensus       208 ~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~~~  280 (871)
                      .++||.+++.+.+.++||+.|++.+++.++..++..++.++++++.++++++++      ...+ .+.+++++.++....
T Consensus       134 ~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (352)
T PF07690_consen  134 SILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLI  213 (352)
T ss_dssp             HHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHH
T ss_pred             hhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhh
Confidence            999999999999888999999999999988777544555443333222222111      1122 455666666664555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCC-chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTD-NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      ..+...........+.|.|+.+.+|.+ ..+.+...+...+...++.++.+++.||+++++..  ........+..+.+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~  291 (352)
T PF07690_consen  214 AFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL--LIAILLLILGALGLL  291 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH--HHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--HHHHHHHHHHHHHHH
Confidence            555555566778888999878889999 78999999999999999999999999999987644  233333333333333


Q ss_pred             c---chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q psy17194        360 F---STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP  420 (871)
Q Consensus       360 ~---~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp  420 (871)
                      .   ..+....+...++.|++.+...+.....   ..+..|++++|++.|+.+...++|..+||
T Consensus       292 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  292 LLPFSSSPVWLIIALFLIGFGFGIVFPILFSL---IQELVPPEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             CSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHH---HHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            2   2334555556677777777764444444   44445669999999999999999999987

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>PRK14995 methyl viologen resistance protein SmvA; Provisional

Probab=99.97  E-value=5.4e-28  Score=276.60  Aligned_cols=401  Identities=14%  Similarity=0.053  Sum_probs=279.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      +..+++..++.......+...+|.+ .+++|.+..+.+|+.+.+.++..++.++.|+++||+|||+.+  ..+..+..++
T Consensus         8 ~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l--~~~~~~~~~~   84 (495)
T PRK14995          8 LVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLL--MLGGTLFGLA   84 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHHHHH
Confidence            3444555566666666677777775 566899999999999999999999999999999999999965  7788888899


Q ss_pred             HHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        355 CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       355 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~-~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      .+.++++++.+.++++++++|+|.+...+.....   +.+.+ ++++|++++|+......+|..+||.++|.+.++.|||
T Consensus        85 ~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~---l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr  161 (495)
T PRK14995         85 SLAAAFSPTASWLIATRALLAIGAAMIVPATLAG---IRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWG  161 (495)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChH
Confidence            9999999999999999999999998764433333   22333 4589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPA  513 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (871)
                      |.|++...+.++.+++..+..+.+++++             +++.            + ...                  
T Consensus       162 ~~f~i~~~~~~~~~~l~~~~l~~~~~~~-------------~~~~------------d-~~g------------------  197 (495)
T PRK14995        162 SVFLINVPIVLVVMGLTARYVPRQAGRR-------------DQPL------------N-LGH------------------  197 (495)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCCC-------------CCCC------------C-hHh------------------
Confidence            9999987776665554443322110000             0000            0 000                  


Q ss_pred             cccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh
Q psy17194        514 ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW  593 (871)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  593 (871)
                                 ......++..   -..+.......+|+........+..... +..+...+.    +..+|..+     .
T Consensus       198 -----------~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~f~~~e~----~~~~p~~~-----~  253 (495)
T PRK14995        198 -----------ALMLIVAILL---LVYSAKTALKGFLSLWVTSLTLLTGALL-LGLFIRTQL----AASRPMID-----M  253 (495)
T ss_pred             -----------HHHHHHHHHH---HHHHHHhccccCCchHHHHHHHHHHHHH-HHHHHHHHh----cCCCCCcC-----H
Confidence                       0000000000   0000000011222222222222222222 222222111    11122222     6


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHH
Q psy17194        594 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  673 (871)
Q Consensus       594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g  673 (871)
                      +++|+|.+....+..++.+..+++...++|.|+|+.+|+|+.++|+.+.+..++..+++++.|++.||+++|+  .+..|
T Consensus       254 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~--~~~~g  331 (495)
T PRK14995        254 RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRL--VATGG  331 (495)
T ss_pred             HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH--HHHHH
Confidence            7999999999888888888888888899999999999999999999999999999999999999999999877  55667


Q ss_pred             HHHHhhHHhhhc---chhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        674 LVLEGLCCFIIP---FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       674 ~~~~~~~l~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      ..+.+++++.+.   ..++.+.....++..|+|.+...++........++   ++++|.+++++|+.+++|+.+|+.+.|
T Consensus       332 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~lG~~~G~ai~g  408 (495)
T PRK14995        332 MALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAP---PEKAAAAGAIETMAYELGAGLGIAIFG  408 (495)
T ss_pred             HHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCC---HHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence            666666655443   22344445566777788888776655555554444   888999999999999999999999999


Q ss_pred             HhHh
Q psy17194        751 GIVD  754 (871)
Q Consensus       751 ~l~~  754 (871)
                      .+++
T Consensus       409 ~i~~  412 (495)
T PRK14995        409 LLLS  412 (495)
T ss_pred             HHHH
Confidence            8865

>PRK11043 putative transporter; Provisional

Probab=99.97  E-value=1.3e-27  Score=267.14  Aligned_cols=352  Identities=14%  Similarity=0.148  Sum_probs=264.0

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      .+.+..++..+..+.+.|.+|.+.+++|.                           ++.+.|++.+++.++..++.+++|
T Consensus        10 ~~~~~~~~~~~~~~~~~p~~~~i~~~~~~---------------------------s~~~~g~~~s~~~~~~~~~~~~~g   62 (401)
T PRK11043         10 YLAGLSMLGFLATDMYLPAFKAIQADLQT---------------------------SASAVSASLSLFLAGFALGQLLWG   62 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHCC---------------------------CHHHHHHHHHHHHHHHHHHHHhhh
Confidence            33434555667778888999999999866                           889999999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISF  206 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~  206 (871)
                      +++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |++++++.++.......+
T Consensus        63 ~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  141 (401)
T PRK11043         63 PLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRY-PAQKANRVFATIMPLVAL  141 (401)
T ss_pred             hHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999888888889999987 567899999999999999


Q ss_pred             HHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHH
Q psy17194        207 GCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  286 (871)
Q Consensus       207 G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (871)
                      |..++|.+++++.+.+|||+.|++.+++.++..+..+++.++.+++     ++++...+.++.+|++.++..........
T Consensus       142 ~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (401)
T PRK11043        142 SPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKAR-----KQSQDALTFKQLLKSKTYLGNVLIFAACS  216 (401)
T ss_pred             HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCcc-----ccchHHHHHHHHHcChhHHHHHHHHHHHH
Confidence            9999999999999999999999999888877666555443332211     11122345677888887765554444444


Q ss_pred             HHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHH-HHHHHHHHHHHHhhc--chh
Q psy17194        287 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA-VGLVLEGLCCFIIPF--STS  363 (871)
Q Consensus       287 ~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~-~~~~~~~~~~~~~~~--~~~  363 (871)
                      ........+.|.++++ +|.+..+.++......++..++.++.+++.||+++|+..... ....+..+.......  .++
T Consensus       217 ~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (401)
T PRK11043        217 AAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS  295 (401)
T ss_pred             HHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence            4555556677877754 799999999988888888999999999999999988744211 111111122222211  233


Q ss_pred             hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHH
Q psy17194        364 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN  436 (871)
Q Consensus       364 ~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f  436 (871)
                      .+..++...+.+++.+...+..   .....+. .++++|++.|+.++....+...++.+.|.+.+.......+
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  364 (401)
T PRK11043        296 LVPLLIPFCVMAAANGAIYPIV---VAQALRP-FPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS  364 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---HHHHhhh-CcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence            4444444555666666653332   2223333 3468999999999999999999999999998754444433

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.97  E-value=2.6e-28  Score=279.88  Aligned_cols=387  Identities=14%  Similarity=0.038  Sum_probs=264.8

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      .+...+..++.+.++++...+.+..|.+.+++..                   -+.++++.+..+.+++.+++.++..++
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~s~~~ig~~~~   71 (479)
T PRK10077         11 FSITLVATLGGLLFGYDTAVISGTVESLNTVFVA-------------------PQNLSESAANSLLGFCVASALIGCIIG   71 (479)
T ss_pred             HHHHHHHHHHHHhcCcccceehHhHHHHHHHhcc-------------------cccccccCChhHHHHHHHHHHHHHHHH
Confidence            4456667778889999999999999999888732                   123345778999999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCC
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG------------RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE  189 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------------~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~  189 (871)
                      ++++|+++||+|||++++++.++++++.++++++            +.++.++++|+++|++.|...+...++++|++ |
T Consensus        72 ~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~-~  150 (479)
T PRK10077         72 GALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIA-P  150 (479)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhC-C
Confidence            9999999999999999999999999998887763            23567889999999999999999999999997 6


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHhHHHHHHHH--------hhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCC-
Q psy17194        190 ENERSQALGIALAFISFGCLVAPPFGGALY--------QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPES-  260 (871)
Q Consensus       190 ~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~--------~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~-  260 (871)
                      +++|++++++.+.+..+|.++++.+++.+.        +.+|||++|++.+++.++..+. .++.||+++....+++.+ 
T Consensus       151 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~  229 (479)
T PRK10077        151 AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQ  229 (479)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHH
Confidence            689999999999999999999988877654        3468999999988877776544 455666553211110000 


Q ss_pred             -----------Cc----ccchhhhhc-----chhHHHH----HHHH-HHH----HHHHHHHHHHHHHHHHHhhCCCchhH
Q psy17194        261 -----------HS----TVPIWKLFM-----DPYIAVC----SGAL-LMA----NVALAFLEPTISLWIEDNLTTDNWKI  311 (871)
Q Consensus       261 -----------~~----~~~~~~~~~-----~~~~~~~----~~~~-~~~----~~~~~~~~~~~~~~l~~~~g~s~~~~  311 (871)
                                 ..    ..+.++.++     .+.++..    .... ...    .........+.|.+. +..|.+....
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~  308 (479)
T PRK10077        230 AEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIA  308 (479)
T ss_pred             HHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchH
Confidence                       00    001111111     0111000    0000 000    011112223345444 4578887777


Q ss_pred             HHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc--hh-hH-HHHHHHHHHHHHHhhhhhhhhh
Q psy17194        312 GMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS--TS-YQ-MLMLPICGICFGMALVDTALLP  387 (871)
Q Consensus       312 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~l~~~~~l~g~g~~~~~~~~~~  387 (871)
                      .+......+..+++.++.++++||+|||+.+  ..+..+.+++.+.+...  .+ .+ ......++.+++.+....  ..
T Consensus       309 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~--i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  384 (479)
T PRK10077        309 LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ--IIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWG--PV  384 (479)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcChHHH--HHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhcccc--ch
Confidence            7777777888899999999999999999865  55555555555444322  11 11 222233334444433211  11


Q ss_pred             hhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH------hhhChhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        388 TLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV------DAIGFTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       388 ~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~------~~~g~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                      ......+.+|+++|++++|+.+....++.++++.+.+.+.      +..++++.|++.+++.++..++.++..
T Consensus       385 ~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  457 (479)
T PRK10077        385 CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFV  457 (479)
T ss_pred             hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhcc
Confidence            2233445567799999999999999999999877766444      578888889888877666655554443

>KOG3764|consensus

Probab=99.97  E-value=6.3e-30  Score=260.13  Aligned_cols=352  Identities=37%  Similarity=0.605  Sum_probs=308.5

Q ss_pred             hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhh
Q psy17194        304 LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDT  383 (871)
Q Consensus       304 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~  383 (871)
                      .+.++.++|+++....+...+.+++.|.+.||+|+|-.+  .+|+.......+++++..+++.++++|.++|+|.+....
T Consensus       101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm--~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t  178 (464)
T KOG3764|consen  101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPM--VAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT  178 (464)
T ss_pred             ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHH--HHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence            455778899999999999999999999999999988744  889999999999999999999999999999999999855


Q ss_pred             hhhhhhhhhhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q psy17194        384 ALLPTLGYLVDVRYV-SVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPF  462 (871)
Q Consensus       384 ~~~~~~~~~~~~~~~-~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  462 (871)
                      ...++   +++.+|. ++|++++|+.-.+..+|..+||+++|.++|..|++..|+++++++++-..+-+++.+.++.+++
T Consensus       179 sglam---lAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~  255 (464)
T KOG3764|consen  179 SGLAM---LADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD  255 (464)
T ss_pred             hhHHH---HHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence            55555   4454443 4689999999999999999999999999999999999999999888877776655431110000


Q ss_pred             chhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhH
Q psy17194        463 ENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGG  542 (871)
Q Consensus       463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  542 (871)
                                                                                                      
T Consensus       256 --------------------------------------------------------------------------------  255 (464)
T KOG3764|consen  256 --------------------------------------------------------------------------------  255 (464)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             HHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcH
Q psy17194        543 ALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTI  622 (871)
Q Consensus       543 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  622 (871)
                                                                ..++..|+++++++|.++.........+..+.+..+++
T Consensus       256 ------------------------------------------~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtl  293 (464)
T KOG3764|consen  256 ------------------------------------------STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTL  293 (464)
T ss_pred             ------------------------------------------ccccCccHHHHHhCchHhhhhcchhhccchHHHhCccc
Confidence                                                      00011257899999999999999999999999999999


Q ss_pred             HHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhh
Q psy17194        623 SLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICF  702 (871)
Q Consensus       623 p~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~  702 (871)
                      |+++.+...-+..+.|+.+++..+.++++..+.|.+.||++..|++....++++.+.++...++.+++..+++..++.++
T Consensus       294 slwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~  373 (464)
T KOG3764|consen  294 SLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGF  373 (464)
T ss_pred             HHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHH
Confidence            99998988877779999999999999999999999999999878878889999999888888899999889999999999


Q ss_pred             hhhhcchhhhhhhhhhhhhcccc---ccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        703 GMALVDTALLPTLGYLVDVRYVS---VYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~---~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +.+.+...+.|...+.+|.++.+   .+|+.+++.....++|.++||.++|.+.+..||.|...+.++..++.++++.++
T Consensus       374 ~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll  453 (464)
T KOG3764|consen  374 GIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL  453 (464)
T ss_pred             HHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999766   899999999999999999999999999999999999999999999999887777


Q ss_pred             hcc
Q psy17194        780 KNI  782 (871)
Q Consensus       780 ~~~  782 (871)
                      +..
T Consensus       454 ~~v  456 (464)
T KOG3764|consen  454 RIV  456 (464)
T ss_pred             HHh
Confidence            653

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.97  E-value=1.4e-27  Score=266.39  Aligned_cols=354  Identities=17%  Similarity=0.223  Sum_probs=269.7

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .++.+.+..+..++..+......|.+|.+.+++|.                           ++.+.+++.+++.++..+
T Consensus         6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~---------------------------s~~~~~~~~~~~~~~~~~   58 (394)
T PRK11652          6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV---------------------------REGAVQAVMAAYLLTYGL   58 (394)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34455555566667777788888999999999866                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +.+++|+++||+|||+++.++.++.+++.+++.++++++.+++.|++.|++.+...+....+..|.+ +++++++++++.
T Consensus        59 ~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  137 (394)
T PRK11652         59 SQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLY-EGTQLRHANSLL  137 (394)
T ss_pred             HHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-CHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999988888889999987 568999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHH
Q psy17194        201 LAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  280 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (871)
                      +.+..+|..+||.+++.+.+..|||+.|++.++..++..++..+..||.++..+   ++++.....++.+++|.++....
T Consensus       138 ~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  214 (394)
T PRK11652        138 NMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADA---RRTRVLASYRTLLSNRRFNCYLL  214 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCcccc---chhHHHHHHHHHHcChHHHHHHH
Confidence            999999999999999999998899999999888777666655556665432211   11112344566788888776555


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      ..+........+....+.++++.+|.++.+.++......++..++..+.+++.||++++. ...........+.......
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~  293 (394)
T PRK11652        215 MLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-WQSVICCLLAGLLMWIPGW  293 (394)
T ss_pred             HHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence            555545555555666777888888999999999888888889999999999999998332 2111222222222222211


Q ss_pred             --chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        361 --STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       361 --~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                        ..+.+.++...++.+++.+...+.....   ..+.. ++++|++.++.+....+|..+++.+.+.+.+..
T Consensus       294 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~-~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~  361 (394)
T PRK11652        294 FGVMNVWTLLVPAALFFFGAGMLFPLATSG---AMEPF-PYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG  361 (394)
T ss_pred             hccccHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhc-cccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence              2244555666677777777764444433   33333 367899999999999999999999999876553

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.97  E-value=1.8e-27  Score=270.72  Aligned_cols=374  Identities=13%  Similarity=0.111  Sum_probs=273.2

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ..+++..+..++......+.+|.+.++.|.                           +..++|.+ +.....+ ++.+++
T Consensus        15 ~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~---------------------------~~~~ig~~-~~~~~~~-~~~~l~   65 (491)
T PRK11010         15 AILLILGFASGLPLALTSGTLQAWMTVENI---------------------------DLKTIGFF-SLVGQAY-VFKFLW   65 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---------------------------CHHHHHHH-HHHHHHH-HHHHHH
Confidence            345555566777778888999999988765                           88889987 4444444 588999


Q ss_pred             hHhhhhh-----CCchH-HHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        126 GALIDRI-----GYDLP-MMIGLCIMFLSTALFACG---RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       126 G~l~Dr~-----Grr~~-l~~~~~~~~i~~~l~~~a---~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      |+++||+     |||+. ++.+.+..+++..++++.   ++++.+.+.+++.|++.+...+...+++.|++ |+++|+++
T Consensus        66 gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~-~~~~rg~~  144 (491)
T PRK11010         66 SPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVL-PAEERGAG  144 (491)
T ss_pred             HHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ChhhhHHH
Confidence            9999999     99885 667777777777777775   47889999999999999999999999999997 67899999


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHh-hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC-CCcccchhhhhcchh
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQ-FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE-SHSTVPIWKLFMDPY  274 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~-~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  274 (871)
                      .++...+..+|.++++.+++++.+ .+|||.+|++.+++.++..+..++ .||+++..+++++. ++...+.++.++++.
T Consensus       145 ~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~  223 (491)
T PRK11010        145 AAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKTLEQAVVAPLRDFFGRNN  223 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccchhhhHHHHHHHHHcCcC
Confidence            999999999999999999999998 579999999999887776555443 55543221111110 111234556777776


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHH-hhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWL-PAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  353 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~  353 (871)
                      .+......++..........+.+.|+.+.+|++..+.++... ...++.+++.+++|+++||+|+|+.+  ..+..+.++
T Consensus       224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l--~i~~~l~~l  301 (491)
T PRK11010        224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRAL--MIFGILQGV  301 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHH
Confidence            665555555555565666677788887778999999999874 55678999999999999999988854  222222222


Q ss_pred             HH---HHhhcc-hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        354 CC---FIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  429 (871)
Q Consensus       354 ~~---~~~~~~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~  429 (871)
                      ..   ...... ++.+.+....++..+..+...+...+......+   ++.+++..++.+....+|..+++.+.|.+.|.
T Consensus       302 ~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~---~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~  378 (491)
T PRK11010        302 SNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN---KSFSATQFALLSALSAVGRVYVGPVAGWFVEA  378 (491)
T ss_pred             HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22   222222 333333334444444444443434444444444   47789999999999999999999999999999


Q ss_pred             hChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        430 IGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       430 ~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .||+..|.+.+++.+.++++....++
T Consensus       379 ~G~~~~f~~~~~~~l~~l~~~~~~~~  404 (491)
T PRK11010        379 HGWPTFYLFSVAAAVPGLLLLLVCRQ  404 (491)
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999888888877666655543

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.97  E-value=1.2e-27  Score=265.22  Aligned_cols=355  Identities=13%  Similarity=0.109  Sum_probs=269.3

Q ss_pred             HHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhh
Q psy17194         52 LLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDR  131 (871)
Q Consensus        52 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr  131 (871)
                      ++......+...|++|.+.+++|.                           |..++|++.+++.++..++++++|+++||
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~~g~---------------------------s~~~iG~~~~~~~l~~~l~~~~~g~l~dr   65 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKGQGY---------------------------TPETIGLLLGAGLVARFLGSLLIAPRVKD   65 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHhhhHHHHHHHhh
Confidence            455556678889999999999866                           89999999999999999999999999999


Q ss_pred             hCCc----hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHH
Q psy17194        132 IGYD----LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFG  207 (871)
Q Consensus       132 ~Grr----~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G  207 (871)
                      +|||    +.+.+...+.  ....+..+++++.+++.|++.|++.+...+...+++.++   +++|+++++......++|
T Consensus        66 ~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~---~~~~~~a~~~~~~~~~lg  140 (382)
T PRK11128         66 PSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW---QKQIGLDYGKVRLWGSIA  140 (382)
T ss_pred             hcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH---HhhccCCcchHHHHHHHH
Confidence            9994    3333222222  223344568899999999999999999999988888875   257899999999999999


Q ss_pred             HHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHH
Q psy17194        208 CLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANV  287 (871)
Q Consensus       208 ~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (871)
                      .++||++++++.+++|||..|++.++..++..+. .+..|+.+++.+++++.++...+.++++|+|.++......++...
T Consensus       141 ~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~  219 (382)
T PRK11128        141 FVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQG  219 (382)
T ss_pred             HHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHH
Confidence            9999999999999999999999887655544333 333343221111111111123456788999999888777777777


Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      .......+.+.|+++ .|.++.+.|.+.+...++.++..++.+++.||+++|+.+  ..+....+++.+.....++.+.+
T Consensus       220 ~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~  296 (382)
T PRK11128        220 SHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL--LLSAICGVVRWGLMGSTTALPWL  296 (382)
T ss_pred             HhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHHHhhhhHHHH
Confidence            777777888888865 799999999999988888999999999999999999854  56666777777777777888877


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILY  446 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~-~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~  446 (871)
                      ++..++.+++.+...+.....    .+..+++++++..++.+ ....+|..+||.++|.+.|.+|+ ..++..+++.+++
T Consensus       297 ~~~~~l~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~  371 (382)
T PRK11128        297 IVIQILHCGTFTVCHLAAMRY----IAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA  371 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH----HHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence            878888888887763333322    22235567788899886 55677889999999999999987 4666666555444


Q ss_pred             H
Q psy17194        447 A  447 (871)
Q Consensus       447 ~  447 (871)
                      +
T Consensus       372 ~  372 (382)
T PRK11128        372 L  372 (382)
T ss_pred             H
Confidence            3

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.97  E-value=1.6e-28  Score=281.76  Aligned_cols=380  Identities=16%  Similarity=0.076  Sum_probs=262.9

Q ss_pred             HHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         47 IVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      ++.++.++..++...+.+.+|.+..+++....                   ++.+.+..+.|++.+++.++..++++++|
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~g   92 (481)
T TIGR00879        32 IAAIGGLMFGYDTGVIGGALALPAFEFKFTSA-------------------NSDSYSSSLWGLVVSIFLVGGFIGALFAG   92 (481)
T ss_pred             HHHHHHHhcccccchhhhhhhcHHHHHhcCCc-------------------ccCCCChhHHHHHHHHHHHHHHHHHHHhh
Confidence            33445556777788888889988888765110                   11135789999999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFACG---RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      +++||+|||++++++.++.+++.+++.+.   .+++.+++.|+++|++.+...+...++++|++ |+++|++++++.+.+
T Consensus        93 ~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~  171 (481)
T TIGR00879        93 WLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIA-PKALRGALTSLYQLA  171 (481)
T ss_pred             HhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccC-ChhhhhhhhhHHHHH
Confidence            99999999999999999999999988654   35568999999999999999999999999987 668999999999999


Q ss_pred             HHHHHHHhHHHH---HHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC--------------CCCcc---
Q psy17194        204 ISFGCLVAPPFG---GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP--------------ESHST---  263 (871)
Q Consensus       204 ~~~G~~lg~~l~---~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~--------------~~~~~---  263 (871)
                      ..+|.++++.++   +.+.+..+||+.|++.++..++.. +..++.+|.+.....+++              ..+..   
T Consensus       172 ~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (481)
T TIGR00879       172 ITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELL  250 (481)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHH
Confidence            999999999998   666567799999999666555544 444455554321000000              00000   


Q ss_pred             ------------------cchhhhhc------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhH
Q psy17194        264 ------------------VPIWKLFM------DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF  319 (871)
Q Consensus       264 ------------------~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~  319 (871)
                                        ..+.+.++      .+.++......+...........+.|.++ +++|.+..+.++......
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~  329 (481)
T TIGR00879       251 DELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF-ENAGVSTDHAFLVSIIVG  329 (481)
T ss_pred             HHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH-HHcCCCchHHHHHHHHHH
Confidence                              00011221      11122222222222222223344455544 557888888888888888


Q ss_pred             HhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh---c--chh-----hHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy17194        320 FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP---F--STS-----YQMLMLPICGICFGMALVDTALLPTL  389 (871)
Q Consensus       320 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~--~~~-----~~~l~~~~~l~g~g~~~~~~~~~~~~  389 (871)
                      ++.+++.++.++++||+++|+.+  ..+..+.+++.+.+.   .  ..+     ....+....+.+.+.+....  ....
T Consensus       330 ~~~~~~~~~~g~l~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  405 (481)
T TIGR00879       330 AVNFAFTFVAIFLVDRFGRRPLL--LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWG--PVPW  405 (481)
T ss_pred             HHHHHHHHHHHHHHHHhcchHHH--HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHcccc--Ceeh
Confidence            99999999999999999999865  444444455444443   1  111     22222222233333332211  1112


Q ss_pred             hhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHH
Q psy17194        390 GYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       390 ~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      ....+..|+++|++++++.+...++|.+++|.+.+.+.++.||++.|++.++++++.+++.++
T Consensus       406 ~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~  468 (481)
T TIGR00879       406 VIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYF  468 (481)
T ss_pred             hhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHhe
Confidence            223455677899999999999999999999999999999999999999888877776665544

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.97  E-value=3.9e-27  Score=264.89  Aligned_cols=377  Identities=17%  Similarity=0.199  Sum_probs=300.3

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      .+.+..++++.++++++..+....++.++.+..                           .|+..++++.++..+...+.
T Consensus         9 ~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt---------------------------~S~~~valv~~a~~LP~~Ll   61 (524)
T PF05977_consen    9 NRNFRRLWIAQLISNLGDWMQTVALAWLVTQLT---------------------------GSPLMVALVQAASTLPILLL   61 (524)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------------------CCHHHHHHHHHHHHHHHHHH
Confidence            344556788888899999988888888887753                           38999999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG-----RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-----~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      ++++|.++||++|||+++.+.++.++..+..++.     .+.+.+++.-++.|++.+...|+.++++.+++ |+++..++
T Consensus        62 sl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV-~~~~L~~A  140 (524)
T PF05977_consen   62 SLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELV-PKEDLPAA  140 (524)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cHhhHHHH
Confidence            9999999999999999999988877665544432     47889999999999999999999999999997 77899999


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC-CCCcccchhhhhcchhH
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP-ESHSTVPIWKLFMDPYI  275 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  275 (871)
                      +++.+...++..++||.++|.+...+|-.+.|++.++..++..+......++.+++...+++ .+.-....+.+.++|.+
T Consensus       141 ~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l  220 (524)
T PF05977_consen  141 NALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPL  220 (524)
T ss_pred             HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHH
Confidence            99999999999999999999999999999999998887776554444333322111111110 01111233344556776


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ...+...++.++....+...+|.+.++.+|.++...|++.+..++|.++|.++.+++.+|+++++++  ..+.++.++++
T Consensus       221 ~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv--~~~~~~~a~~~  298 (524)
T PF05977_consen  221 RSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV--LLASLLFALAL  298 (524)
T ss_pred             HHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh--HHHHHHHHHHH
Confidence            6666656666666666677889999999999999999999999999999999999999999988844  66777888888


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      +.+++.++.+..++..++.|++.........+..+..   .|++.||++++++++....+..+|..+.|.+.+.+|.+..
T Consensus       299 ~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~---~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~a  375 (524)
T PF05977_consen  299 LLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLS---VPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTA  375 (524)
T ss_pred             HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence            8888999988888877888888777644444444443   4559999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q psy17194        436 NFLIAFMNILYAPVLI  451 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~  451 (871)
                      +.+.++..++..++..
T Consensus       376 l~~a~~~lll~~~~~~  391 (524)
T PF05977_consen  376 LLIAGAALLLSALIAL  391 (524)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            8877766555554443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.97  E-value=2.5e-27  Score=262.78  Aligned_cols=334  Identities=13%  Similarity=0.190  Sum_probs=250.0

Q ss_pred             hhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCch
Q psy17194         57 MLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDL  136 (871)
Q Consensus        57 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~  136 (871)
                      +...+..|.+|.+.+++|.                           ++.+.+++.+++.++..++.+++|+++||+|||+
T Consensus         5 ~~~~~~~p~~~~~~~~~~~---------------------------s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~   57 (377)
T PRK11102          5 LAIDMYLPALPVIAADFGV---------------------------SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKP   57 (377)
T ss_pred             hHHHHHhccHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChH
Confidence            3455667999999999866                           8899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHH
Q psy17194        137 PMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGG  216 (871)
Q Consensus       137 ~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~  216 (871)
                      ++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++.+....+|..++|.+++
T Consensus        58 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~  136 (377)
T PRK11102         58 VILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMF-PKEEFSRMMSFVTLVMTIAPLLAPIIGG  136 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999986 6789999999999999999999999999


Q ss_pred             HHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC-CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHH
Q psy17194        217 ALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE-SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPT  295 (871)
Q Consensus       217 ~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (871)
                      .+.+.++||+.|++.+++.++..++..+..+|.+++.++++.+ ++...+.++.++++.++......++..........+
T Consensus       137 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (377)
T PRK11102        137 WLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTA  216 (377)
T ss_pred             HHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999999999999988888877766666666643322111111 111223456778888776666655555555566666


Q ss_pred             HHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH---HHHHHHhhcc-hhhHHHHHHH
Q psy17194        296 ISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE---GLCCFIIPFS-TSYQMLMLPI  371 (871)
Q Consensus       296 ~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~l~~~~  371 (871)
                      .|.++.+.+|.++.+.++......++.+++.++.+++.||+|+|+.+  ..+..+.   ++........ .+.+...+..
T Consensus       217 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (377)
T PRK11102        217 GPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML--RFGLWIQFIMGIWLVVSALLDLGFWALVVGV  294 (377)
T ss_pred             CHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH--HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence            77778888899999999999999999999999999999999999855  3333322   2222222211 2333333333


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHH-HHHHHHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISY-SLAYAIGPIVAG  424 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~-~lg~~igp~l~g  424 (871)
                      .+.+.+.+..   .........+. .++.+|++.++.+... .+|..+++.+++
T Consensus       295 ~~~~~~~~~~---~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~g~~~g~~~~~  344 (377)
T PRK11102        295 AAFVGCVSMI---SSNAMAVILDE-FPHMAGTASSLAGTLRFGIGAIVGALLSL  344 (377)
T ss_pred             HHHHHHHHHh---hHHHHHHHhcc-ccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3333333332   12222233343 4588999999876643 455666665543

>PRK11663 regulatory protein UhpC; Provisional

Probab=99.97  E-value=9.5e-28  Score=270.35  Aligned_cols=392  Identities=14%  Similarity=0.116  Sum_probs=265.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ...++..++..+....+...+|.+. +++|.|..+.+++.+.+.++..+++++.|++.||+|+|+.+  ..+..+.+++.
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~--~~~~~~~~~~~  102 (434)
T PRK11663         26 ITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFM--GIGLIATGIIN  102 (434)
T ss_pred             HHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhH--HHHHHHHHHHH
Confidence            3334444444444445566677655 45899999999999999999999999999999999999855  77788888888


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      +++++.++.+.+++.+++.+++.+...+.....   +.+.+++++|++++++.+....+|..++|.+.+.+.+.+||++.
T Consensus       103 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~---~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~  179 (434)
T PRK11663        103 ILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKL---LTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYG  179 (434)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHccchHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHH
Confidence            888888888888888888888887664433333   34445668999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHH-HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccc
Q psy17194        436 NFLIAFMNILYAPVLIY-LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      |++.+++.++..+...+ +++.+++..          .++..+.++    +.++.        +.   +     ...+  
T Consensus       180 f~~~~i~~~~~~~~~~~~~~~~p~~~~----------~~~~~~~~~----~~~~~--------~~---~-----~~~~--  227 (434)
T PRK11663        180 MMIAGIIAIVVGLFLCWRLRDKPQAMG----------LPSVGEWRH----DALEL--------AQ---Q-----QEGA--  227 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCHhhcC----------CCCcccccc----ccccc--------ch---h-----cccc--
Confidence            99888766554433332 222110000          000000000    00000        00   0     0000  


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc-h-
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP-I-  592 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  592 (871)
                                                                                             ..+..+ + 
T Consensus       228 -----------------------------------------------------------------------~~~~~~~~~  236 (434)
T PRK11663        228 -----------------------------------------------------------------------GLSRKEILT  236 (434)
T ss_pred             -----------------------------------------------------------------------CCChhhhHH
Confidence                                                                                   000000 1 


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC--chhhH--
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP--TYQWL--  668 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~--~~~~~--  668 (871)
                      ..++++|.++...+..++.+...+.+..++|.|+++.+|+++.+.++..+...++.+++.++.|+++||+.  +|+..  
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~  316 (434)
T PRK11663        237 KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNL  316 (434)
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHH
Confidence            23678888888877777777777788889999998889999999999999999999999999999999983  22321  


Q ss_pred             HHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        669 MVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       669 ~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      ....+..+..+++..+.. .+........+++|++...   +.........+..+++.+|+++|+.|+..++|+++||.+
T Consensus       317 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~  392 (434)
T PRK11663        317 IFAAGILLSVGSLWLMPF-ASYVMQAACFFTIGFFVFG---PQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP  392 (434)
T ss_pred             HHHHHHHHHHHHHHHccc-ccHHHHHHHHHHHHHHHhh---HHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence            112222222223222332 2222222222333332211   111112233344557899999999999999999999999


Q ss_pred             HHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        749 AGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       749 ~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      .|.+.|+.||+.+|.+.+++.+++++..+...
T Consensus       393 ~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~  424 (434)
T PRK11663        393 LAKVLEIWHWTGFFVVISIAAGISALLLLPFL  424 (434)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999888888776555443

>PRK03545 putative arabinose transporter; Provisional

Probab=99.97  E-value=3.5e-27  Score=262.46  Aligned_cols=352  Identities=13%  Similarity=0.109  Sum_probs=262.7

Q ss_pred             HHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q psy17194        292 LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPI  371 (871)
Q Consensus       292 ~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  371 (871)
                      ..+.+|. +.+++|.+..+.++..+.+.++..+++++.|++.||+|||+.+  ..+..+..++.+.+.++++++.+++.+
T Consensus        28 ~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~r  104 (390)
T PRK03545         28 PVGLLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLL--IGLFVLFIASHVLSALAWNFTVLLISR  104 (390)
T ss_pred             HHcchHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence            3344555 5667999999999999999999999999999999999999955  677888888888888899999999999


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      ++.|++.+...+...+..   .+..|+++|++++|+......+|..++|++++.+.+..||++.|++.+++.++..+..+
T Consensus       105 ~~~G~~~~~~~~~~~~~i---~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~  181 (390)
T PRK03545        105 IGIAFAHAIFWSITASLA---IRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLI  181 (390)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence            998888877644444443   44456699999999999999999999999999999999999999998877665544333


Q ss_pred             HHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhcccc
Q psy17194        452 YLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPS  531 (871)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  531 (871)
                      ...+..   +             ++        +    +.      +.                                
T Consensus       182 ~~~~~~---~-------------~~--------~----~~------~~--------------------------------  195 (390)
T PRK03545        182 KLLPLL---P-------------SE--------H----SG------SL--------------------------------  195 (390)
T ss_pred             HhCCCC---C-------------CC--------C----cc------hH--------------------------------
Confidence            221100   0             00        0    00      00                                


Q ss_pred             ccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHH
Q psy17194        532 TGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMA  611 (871)
Q Consensus       532 ~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  611 (871)
                                                                                ++..+++|+|.++...+..++.
T Consensus       196 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  217 (390)
T PRK03545        196 ----------------------------------------------------------KSLPLLFRRPALVSLYLLTVVV  217 (390)
T ss_pred             ----------------------------------------------------------HHHHHHHhCcHHHHHHHHHHHH
Confidence                                                                      0124577888877666666666


Q ss_pred             HHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhh-cchhhh
Q psy17194        612 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII-PFSTSY  690 (871)
Q Consensus       612 ~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~-~~~~~~  690 (871)
                      ....+....++|.|+++.+|+|..+.|+++...+++.++++++.|++.||+++|+  . ..+..+.+.+++.+ ....+.
T Consensus       218 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--~-~~~~~~~~~~~~~l~~~~~~~  294 (390)
T PRK03545        218 VTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF--L-LIAIALLLVCLLLLLPAANSE  294 (390)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH--H-HHHHHHHHHHHHHHHHHhchH
Confidence            6666666778888888889999999999999999999999999999999998654  2 23333333333332 334455


Q ss_pred             HHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHH
Q psy17194        691 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNI  770 (871)
Q Consensus       691 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~  770 (871)
                      +.+.+..+..|++.+...+....   ...+.. ++.+++++|+++..+++|..+||.++|.+.|++|++.+++..+++.+
T Consensus       295 ~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~-~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~  370 (390)
T PRK03545        295 WHLSVLSIFWGIAIMCIGLAMQV---KVLKLA-PDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALAL  370 (390)
T ss_pred             HHHHHHHHHHHHHHhcchHHHHH---HHHHhC-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHH
Confidence            55555666666665544333222   223333 56789999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHh
Q psy17194        771 LYAPVLIYLK  780 (871)
Q Consensus       771 ~~~~~~~~~~  780 (871)
                      ++....+...
T Consensus       371 ~~~~~~~~~~  380 (390)
T PRK03545        371 AALVWSILIF  380 (390)
T ss_pred             HHHHHHHHHc
Confidence            8776655443

>KOG2532|consensus

Probab=99.97  E-value=4.5e-28  Score=267.60  Aligned_cols=353  Identities=17%  Similarity=0.192  Sum_probs=286.1

Q ss_pred             cccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHhhhhh
Q psy17194         97 REHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR--SYGVLFFARSLQGVGSAF  174 (871)
Q Consensus        97 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~--s~~~l~~~r~l~G~~~g~  174 (871)
                      .++++++..+.|++.+.+..|+++++.+.|+++||+|.|+++..+.++.++++++..++.  +++.+++.|++||++.|.
T Consensus        65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~  144 (466)
T KOG2532|consen   65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV  144 (466)
T ss_pred             CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence            457899999999999999999999999999999999999999999999999999998874  556789999999999999


Q ss_pred             hhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-hCChhHHHHHHHHHHHHHHHHHHhcccchhhh
Q psy17194        175 ADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF-AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL  253 (871)
Q Consensus       175 ~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~-~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~  253 (871)
                      .+|+...+.++|. |++||++..++...+..+|.+++.+++|++.+. +||+++|++.++++++..++.+++..|.|++.
T Consensus       145 ~~pa~~~i~~~W~-P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h  223 (466)
T KOG2532|consen  145 LFPAIGSILAKWA-PPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH  223 (466)
T ss_pred             HHhhhhceeeeEC-CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence            9999999999996 678999999999999999999999999999998 99999999999999999999888887766432


Q ss_pred             cc---------------CCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhh
Q psy17194        254 NQ---------------KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPA  318 (871)
Q Consensus       254 ~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~  318 (871)
                      +.               +..+++...+++++++++.+|.+.+..+....+...+..+.|.|+++.+|++..+.|+..+.-
T Consensus       224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP  303 (466)
T KOG2532|consen  224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP  303 (466)
T ss_pred             CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence            21               011111356889999999999999999999999999999999999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHhhcCc-------hhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy17194        319 FFPHVFGVVITVKLAKLYPT-------YQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGY  391 (871)
Q Consensus       319 ~~~~~~~~~~~g~l~dr~g~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~  391 (871)
                      .+...+..+++|.++||..+       +|.+.-.++....+++++.+++.++... ....+++.++.+............
T Consensus       304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~-~~a~~~l~~~~~~~g~~~~Gf~~~  382 (466)
T KOG2532|consen  304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR-LLAVILLTIAIGLSGFNISGFYKN  382 (466)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc-hHHHHHHHHHHHHcccchhhhHhh
Confidence            99999999999999999865       3333445566666666776666653222 111122222222211111222222


Q ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---hhChhhHHHHHHHHHHHHHHHHHH
Q psy17194        392 LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD---AIGFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       392 ~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~---~~g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      ..+. .|++.+..+|+.+....+.+.++|.+.|.+..   ...|+.+|++.+++.++..+.+.+
T Consensus       383 ~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~  445 (466)
T KOG2532|consen  383 HQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLF  445 (466)
T ss_pred             hhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeE
Confidence            2221 35788999999999999999999999999984   346999999999888877654443

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.97  E-value=1.2e-27  Score=268.89  Aligned_cols=372  Identities=13%  Similarity=0.152  Sum_probs=259.3

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ..+.+..++..+..+...|++|.+.++ +|.                           ++.++|++.+++.++..+++++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---------------------------s~~~~g~~~s~~~l~~~i~~~~   65 (420)
T PRK09528         13 WIFSLFFFFFFFIWSSWFSFFPIWLHDINGL---------------------------SGTDTGIIFSANSLFALLFQPL   65 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence            344556677777777888999998877 544                           8999999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHH---hhh-----hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFA---CGR-----SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~---~a~-----s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      +|+++||+|||++++++..+.+++.....   .++     .+...++++++.|.+.....+....+..+ +  .+++++.
T Consensus        66 ~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~~  142 (420)
T PRK09528         66 YGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V--SRRSGFE  142 (420)
T ss_pred             HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H--Hhhcccc
Confidence            99999999999999887666555443221   111     11112233444444333333443444333 2  2467778


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc--CC---CCCCcccchhhhhc
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ--KK---PESHSTVPIWKLFM  271 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~  271 (871)
                      +|......++|..++|++++.+.+. +|+.+|++.+++.++..++.++..++++++.+.  ++   +++....+.++.+|
T Consensus       143 ~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  221 (420)
T PRK09528        143 YGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLK  221 (420)
T ss_pred             chhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHcc
Confidence            8999999999999999999998764 899999998888877666665555544332211  01   11111223445778


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNL---TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      +|.++.+.+..+.....+.......|.|+.+.+   +.+..+.+.+.+...++..++.++.|++.||+|+|+.+  ..+.
T Consensus       222 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--~~~~  299 (420)
T PRK09528        222 LPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNAL--LLAG  299 (420)
T ss_pred             CCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhh--HHHH
Confidence            887765555444444444445556677766543   45667788988888899999999999999999999854  5666


Q ss_pred             HHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH-HHHHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi-~~~~~~lg~~igp~l~g~l~  427 (871)
                      .+.+++.++.++.++.+.++...++.+++.+...   .....+..+..|++.+++..+. +++...+|.+++|.+.|++.
T Consensus       300 ~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~  376 (420)
T PRK09528        300 TIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLL---VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY  376 (420)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH
Confidence            6667777777777787777766777776665542   2223344455566888887765 67788999999999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHH
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~  453 (871)
                      |..||+..|.+.+++.++..++.+..
T Consensus       377 ~~~G~~~~f~~~~~~~~i~~~~~~~~  402 (420)
T PRK09528        377 DSIGFQGTYLILGGIVLLFTLISVFT  402 (420)
T ss_pred             HhhCchHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999888776665554443

>KOG1330|consensus

Probab=99.96  E-value=1.7e-29  Score=263.30  Aligned_cols=367  Identities=18%  Similarity=0.212  Sum_probs=265.2

Q ss_pred             ccccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHH
Q psy17194         38 KSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIV  117 (871)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~  117 (871)
                      ....++.+.++++...++.++.+.+..+++...+.+++                           +++..|++.+.+.+.
T Consensus        28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni---------------------------~~s~~Gll~~vf~v~   80 (493)
T KOG1330|consen   28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI---------------------------SDSELGLLQTVFIVV   80 (493)
T ss_pred             cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC---------------------------CchhccchhHHHHHH
Confidence            34456778889999999999999999999999888866                           889999999999999


Q ss_pred             HHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       118 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      +.+++|++|+++|||+||+++.+|..++.++.+++++++.+|+++++|.+.|+|.+.+.|+++++++|.+ |+++|++++
T Consensus        81 ~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f-~~~~Rs~~~  159 (493)
T KOG1330|consen   81 FMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF-PDDKRSRVL  159 (493)
T ss_pred             HHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC-cchhhhHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999997 678999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhC-ChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC--------cccchhh
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQFAG-KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH--------STVPIWK  268 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~~g-wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~  268 (871)
                      ++++.+..+|..+|.+.+..+.+..+ |||.|++.++++++++++.+++.+|+++..+++.+.+.        ..++.+.
T Consensus       160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~  239 (493)
T KOG1330|consen  160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKV  239 (493)
T ss_pred             HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHH
Confidence            99999999999999999999988766 99999999999999999999998886653322222111        1123344


Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc----Cc---
Q psy17194        269 LFMDPYIAVCSGALLMANVALAFLEPTISLWI---EDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY----PT---  338 (871)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~---  338 (871)
                      +.|++.+....+......+..+.+..+.|.++   .+..|.+..+..++..+...++.+|.+++|.++||+    .+   
T Consensus       240 l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~  319 (493)
T KOG1330|consen  240 LAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGT  319 (493)
T ss_pred             HHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccc
Confidence            55556555544444444444444444444433   233344555555566667778888888888888883    22   


Q ss_pred             hhH--HHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH-H
Q psy17194        339 YQW--LMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-A  415 (871)
Q Consensus       339 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l-g  415 (871)
                      .+.  +....+.......+++.....+ ...+....++.+|.-...-...+....+.+..|+++|.+++++......+ |
T Consensus       320 ~~~~q~~~~~g~~~s~~~L~~~~~~~~-~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fg  398 (493)
T KOG1330|consen  320 LRASQLSAALGAPLSIPFLFLFPAFTS-SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFG  398 (493)
T ss_pred             hhHHHHHHhhhhhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhc
Confidence            111  1111122222222222222222 22233333444444333222222233344456789999999998765555 5


Q ss_pred             HHHHHHHHHHHHhhh-Chh
Q psy17194        416 YAIGPIVAGGIVDAI-GFT  433 (871)
Q Consensus       416 ~~igp~l~g~l~~~~-g~~  433 (871)
                      .+-+|.+.|.+.|+. ||+
T Consensus       399 d~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  399 DAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             cCCCcceehhHHHHhhCCC
Confidence            556666999999975 555

>TIGR00895 2A0115 benzoate transport

Probab=99.96  E-value=2.2e-27  Score=265.44  Aligned_cols=352  Identities=19%  Similarity=0.117  Sum_probs=265.5

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      +++.+...++..+...++.....+..|.+.+++|.                           ++.+.|++.+.+.++..+
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~   67 (398)
T TIGR00895        15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL---------------------------DPVQLGFLFSAGLIGMAF   67 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34455556666777777788888889999888765                           889999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +.++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+...+...+++.|++ |+++|++++++.
T Consensus        68 ~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~  146 (398)
T TIGR00895        68 GALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYA-PKRFRGTAVGLM  146 (398)
T ss_pred             HHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHc-CHHhhchhHhhH
Confidence            9999999999999999999999999999999999999999999999999999999999999999986 678999999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC------------------------
Q psy17194        201 LAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK------------------------  256 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~------------------------  256 (871)
                      ..+..+|..+++.+++.+.+..|||+.|++.+++.++..++...+.|+.++...++                        
T Consensus       147 ~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (398)
T TIGR00895       147 FCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSAL  226 (398)
T ss_pred             hhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccc
Confidence            99999999999999999999999999999987777666666666666543210000                        


Q ss_pred             CCC---CCcccchhh-hhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHH
Q psy17194        257 KPE---SHSTVPIWK-LFMD---PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVIT  329 (871)
Q Consensus       257 ~~~---~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~  329 (871)
                      +++   ++......+ .+++   +..+......++..........+.| ++.+++|.+..+.+...+...++.+++.++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  305 (398)
T TIGR00895       227 PEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIF  305 (398)
T ss_pred             cccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            000   000111112 2222   2233333344444455556666777 5556689999999999999999999999999


Q ss_pred             HHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH
Q psy17194        330 VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD  409 (871)
Q Consensus       330 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~  409 (871)
                      +++.||+++|+..  ...........++.....+.+..++..++.+++.+...+.....   ..+..|+++||++.|+.+
T Consensus       306 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~g~~~  380 (398)
T TIGR00895       306 GWLADRLGPRVTA--LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYAL---MALFYPTAIRATGVGWAI  380 (398)
T ss_pred             HHHHhhcchHHHH--HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHH---HhhcCCHHHHHHHHHHHH
Confidence            9999999987432  22222222222222223455555666677777777664444433   444556699999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q psy17194        410 ISYSLAYAIGPIVAGGI  426 (871)
Q Consensus       410 ~~~~lg~~igp~l~g~l  426 (871)
                      ....+|.+++|.++|.+
T Consensus       381 ~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       381 GIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHHHHHHHHHHHhHHhc
Confidence            99999999999999975

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.96  E-value=1.8e-27  Score=265.56  Aligned_cols=361  Identities=14%  Similarity=0.161  Sum_probs=258.1

Q ss_pred             HHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHH-----HHHHHHHHhhhhhhH
Q psy17194         53 LLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFA-----SKAIVQLMVNPFSGA  127 (871)
Q Consensus        53 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s-----~~~l~~~~~~~~~G~  127 (871)
                      +.++++...+.+..+.+.+++..                         +.++.+.+.+.+     ...++..+++++.|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~   57 (394)
T TIGR00883         3 AVEWFDFYLYGFAAVLVFHTFFP-------------------------PSGDPLVALLATFATFAAGFLARPLGAIVFGH   57 (394)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcC-------------------------CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhh
Confidence            34566677776666777766432                         123445555443     334444578999999


Q ss_pred             hhhhhCCchHHHHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        128 LIDRIGYDLPMMIGLCIMFLSTALFACGRSYG--------VLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       128 l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~--------~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      ++||+|||+++..+.++.+++.++++++++++        .+++.|+++|++.+...+...+++.|++ ++++|++.+++
T Consensus        58 l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~  136 (394)
T TIGR00883        58 FGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA-PPGKRGFYGSF  136 (394)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC-CcccchHHHHH
Confidence            99999999999999999999999999998875        4788999999999999999999999987 66899999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHH--------hhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhc
Q psy17194        200 ALAFISFGCLVAPPFGGALY--------QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  271 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~--------~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (871)
                      .+.+..+|.++++.++..+.        +.++||++|++.+++.++..++ ....+|.++..++++++++...+.++.++
T Consensus       137 ~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (394)
T TIGR00883       137 QQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQEKHKKKRGPIRETLT  215 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHhccccccCCHHHHHH
Confidence            99999999999999887664        3568999999887766654333 33344443322222222223344566666


Q ss_pred             chh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q psy17194        272 DPY--IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV  349 (871)
Q Consensus       272 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~  349 (871)
                      ++.  ++......++..........+.|.|+++.+|.+..+.+.......++..++.++.++++||+|+|+.+.. .+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-~~~~  294 (394)
T TIGR00883       216 KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII-FTVL  294 (394)
T ss_pred             hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH-HHHH
Confidence            655  6666666666666677777889999988889999999999988899999999999999999999885432 2222


Q ss_pred             HHHHH-HHHhhc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHHH
Q psy17194        350 LEGLC-CFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA-DISYSLAYAIGPIVAGG  425 (871)
Q Consensus       350 ~~~~~-~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~-~~~~~lg~~igp~l~g~  425 (871)
                      ....+ .+....  .++.+..+...++.+++.+...+...+.   ..+..|+++|+++.++. +....+|..++|.++|.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~  371 (394)
T TIGR00883       295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSF---LPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA  371 (394)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHH---HHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence            22222 111111  2344555555566666666654444433   44445668899999984 55667889999999999


Q ss_pred             HHhhhC-hhhHHHHHHHHHH
Q psy17194        426 IVDAIG-FTALNFLIAFMNI  444 (871)
Q Consensus       426 l~~~~g-~~~~f~~~~~~~~  444 (871)
                      +.|+.| |++.++...++.+
T Consensus       372 l~~~~g~~~~~~~~~~~~~l  391 (394)
T TIGR00883       372 LVAMTGDWYAIGYYLAALAL  391 (394)
T ss_pred             HHHHcCcchhHHHHHHHHHH
Confidence            999998 8877766655443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>PRK10504 putative transporter; Provisional

Probab=99.96  E-value=7.6e-27  Score=266.83  Aligned_cols=407  Identities=12%  Similarity=0.083  Sum_probs=275.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.++.+....++.......+.+.+|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~--~~~~~~~~   86 (471)
T PRK10504         10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIF--FTAIVLFT   86 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHH--HHHHHHHH
Confidence            35566667777777777778888888765 4899999999999999999999999999999999999965  56666677


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        353 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       353 ~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ++.+.+.+.++.+.+++.++++|++.+...+......   .+..|+++|+++.++.+....+|..++|.++|.+.+..||
T Consensus        87 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw  163 (471)
T PRK10504         87 LGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTV---MKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW  163 (471)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence            7777777778888889999999999988755444443   3445668999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCc
Q psy17194        433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      ++.|++......+..++.....+..+.+.                   .+.+.. .      .                 
T Consensus       164 ~~~f~~~~~~~~l~~~~~~~~~~~~~~~~-------------------~r~~~~-~------~-----------------  200 (471)
T PRK10504        164 HWIFLINIPVGIIGAIATLMLMPNYTMQT-------------------RRFDLS-G------F-----------------  200 (471)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCccccC-------------------CCCChH-H------H-----------------
Confidence            99999887766655544433221000000                   000000 0      0                 


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                                   ..  .. ..+..+.++..-.+..+|.... ....+........++..+++.    ..++.    .+ 
T Consensus       201 -------------~~--~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~----~~-  254 (471)
T PRK10504        201 -------------LL--LA-VGMATLTLALDGSKGLGLSPLA-IAGLVAVGVVALLLYLLHARN----NNRAL----FS-  254 (471)
T ss_pred             -------------HH--HH-HHHHHHHHHHhcCCcCCcchHH-HHHHHHHHHHHHHHHHHHHhc----CCCCc----cC-
Confidence                         00  00 0000000000000111232211 112222222222222222111    11111    12 


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHH
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  672 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~  672 (871)
                      .+++|||++....+..++.+..........|.|++..+|.++.+.|+.+.+..++.+++.++.|++.||+++|+  ....
T Consensus       255 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~--~~~~  332 (471)
T PRK10504        255 LKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRR--VLVA  332 (471)
T ss_pred             HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH--HHHH
Confidence            46899999999888888888887777788999998889999999999999999999999999999999999888  4445


Q ss_pred             HHHHHhhHHhhhcc---hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhH
Q psy17194        673 GLVLEGLCCFIIPF---STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  749 (871)
Q Consensus       673 g~~~~~~~l~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~  749 (871)
                      +..+.+++.+++.+   ..+.+.+....++.|++.+...+.........++   ++.+|.++|++++.+.+|+.+||.+.
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~g~~ig~~i~  409 (471)
T PRK10504        333 TTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLP---DNLASSGNSLLSMIMQLSMSIGVTIA  409 (471)
T ss_pred             HHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---HHhccchHHHHHHHHHHHHHHHHHHH
Confidence            55555544433322   2222223344555566666655555555554444   78899999999999999999999999


Q ss_pred             HHhHhhhChH
Q psy17194        750 GGIVDAIGFT  759 (871)
Q Consensus       750 g~l~~~~g~~  759 (871)
                      |.+.+..|+.
T Consensus       410 g~ll~~~g~~  419 (471)
T PRK10504        410 GLLLGLFGQQ  419 (471)
T ss_pred             HHHHHHhhhh
Confidence            9999887764

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.96  E-value=2.1e-26  Score=256.03  Aligned_cols=361  Identities=12%  Similarity=0.080  Sum_probs=265.1

Q ss_pred             hhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         44 ILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      .+.++++.+++.++..+...|++|.+.+++|.                           ++.+.|++.+.+.+++.++++
T Consensus         4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~---------------------------s~~~~g~l~s~~~~g~~i~~~   56 (410)
T TIGR00885         4 PFALITSLFALWGFANDITNPMVPQFQQAFTL---------------------------TAFQAALVQSAFYGGYFIMAI   56 (410)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence            34567777788888888889999999999876                           899999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLSTALFAC---GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIA  200 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~---a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~  200 (871)
                      +.|++.||+|||++++++.++.+++.+++..   .++++.+++.|++.|+|.|...+...+++.+.. |+++|++.+++.
T Consensus        57 ~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~  135 (410)
T TIGR00885        57 PAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG-PESTATRRLNLA  135 (410)
T ss_pred             HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC-CHhHHHHHHHHH
Confidence            9999999999999999999999999988654   368999999999999999999999999999975 778899999999


Q ss_pred             HHHHHHHHHHhHHHHHHHHh--------------------------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc
Q psy17194        201 LAFISFGCLVAPPFGGALYQ--------------------------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN  254 (871)
Q Consensus       201 ~~~~~~G~~lg~~l~~~l~~--------------------------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~  254 (871)
                      +...++|..+||.+++.+..                          ..+||++|++.+++.++..++..+. +. |+.++
T Consensus       136 ~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~-p~~~~  213 (410)
T TIGR00885       136 QSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KM-PALNH  213 (410)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-CCCCc
Confidence            99999999999999987742                          2469999999988777655444322 22 11111


Q ss_pred             cCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCchhHHHHHHhhHHhHHHHHHHHHHHH
Q psy17194        255 QKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-TTDNWKIGMIWLPAFFPHVFGVVITVKLA  333 (871)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~  333 (871)
                      +++++.......++++|+|.++...+..++.........++++.|.++.. +.+....+...+.+..+..+|+++++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~  293 (410)
T TIGR00885       214 SDAKQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLI  293 (410)
T ss_pred             cccccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111111123457788888888777777777777677788898886532 33444445455566677889999999999


Q ss_pred             hhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHH
Q psy17194        334 KLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS  413 (871)
Q Consensus       334 dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~  413 (871)
                      ||+++|+.+  .....+..+..++..+.++... .....+.+++.+..+|...+.....   .+++.+..+.++...  .
T Consensus       294 ~r~~~~~~l--~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~---~g~~~~~~s~~l~~~--~  365 (410)
T TIGR00885       294 SYLAAHKVL--MAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKG---LGQDTKYGAAGLVMA--I  365 (410)
T ss_pred             HHcCHHHHH--HHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhh---hhhhhhhhHHHHHHH--H
Confidence            999998855  4445555555555555544333 3445566677766655444444333   322333333333332  3


Q ss_pred             HHHHHHHHHHHHHHhhh------ChhhHHHHHHHH
Q psy17194        414 LAYAIGPIVAGGIVDAI------GFTALNFLIAFM  442 (871)
Q Consensus       414 lg~~igp~l~g~l~~~~------g~~~~f~~~~~~  442 (871)
                      +|+++.|++.|.+.|..      +.+..|++...+
T Consensus       366 ~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~  400 (410)
T TIGR00885       366 IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC  400 (410)
T ss_pred             hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence            99999999999999964      477777764443

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>PRK09556 uhpT sugar phosphate antiporter; Reviewed

Probab=99.96  E-value=1.4e-27  Score=271.81  Aligned_cols=380  Identities=13%  Similarity=0.000  Sum_probs=256.9

Q ss_pred             HHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH-----hhcchhhHH
Q psy17194        292 LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI-----IPFSTSYQM  366 (871)
Q Consensus       292 ~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~  366 (871)
                      +....|. +.+++|.+..+.|++.+.+.+++.+++++.|+++||+|+|+++  ..+.++.++..+.     +..+++.+.
T Consensus        48 ~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (467)
T PRK09556         48 FKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFL--PFLLILSAICMLGFGASLGSGSVSLGL  124 (467)
T ss_pred             hhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchH--HHHHHHHHHHHHHHHHHHhcccchHHH
Confidence            3344554 6677999999999999999999999999999999999999965  4444444443333     334678899


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh---ChhhHHHHHHHHH
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI---GFTALNFLIAFMN  443 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~---g~~~~f~~~~~~~  443 (871)
                      +++.+++.|++.+...+....   .+.+.+|+++||+++|+.+....+|.++++.+..++.+..   +|+..|.+.+++.
T Consensus       125 l~~~r~l~G~~~~~~~~~~~~---~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~  201 (467)
T PRK09556        125 MIALWALSGFFQSTGGPCSYS---TITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA  201 (467)
T ss_pred             HHHHHHHHHHHHhccchHHHH---HHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH
Confidence            999999999998877444433   3445566799999999999999999999999988777654   5888888877766


Q ss_pred             HHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcc
Q psy17194        444 ILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSN  523 (871)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (871)
                      ++..++.++..+...++....+         .++.    .++.  .        ..   +    +.  ++ ..       
T Consensus       202 ~~~~i~~~~~~~~~p~~~~~~~---------~~~~----~~~~--~--------~~---~----~~--~~-~~-------  241 (467)
T PRK09556        202 LIIGFIGLRYGSDSPEELGWGK---------AEEI----FGEP--I--------SE---E----DK--ET-ES-------  241 (467)
T ss_pred             HHHHHHHHHhCCCChhhcCCCC---------hhhc----ccCc--c--------ch---h----hh--cc-cc-------
Confidence            6554444433221110000000         0000    0000  0        00   0    00  00 00       


Q ss_pred             hhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch-hhhccchhHH
Q psy17194        524 PFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI-WKLFMDPYIA  602 (871)
Q Consensus       524 ~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~  602 (871)
                                                                                 ++. .....+ ..++++|.++
T Consensus       242 -----------------------------------------------------------~~~-~~~~~~~~~~l~~~~~~  261 (467)
T PRK09556        242 -----------------------------------------------------------TDM-TKWQIFVEYVLKNPVIW  261 (467)
T ss_pred             -----------------------------------------------------------ccC-cHHHHHHHHHHcChHHH
Confidence                                                                       000 000001 2378999999


Q ss_pred             HHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHh
Q psy17194        603 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF  682 (871)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~  682 (871)
                      ...+..++.+...++...++|.|+++.+|+|+.++++......++.+++.++.|+++||+++|+..............++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~  341 (467)
T PRK09556        262 LLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLG  341 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHH
Confidence            99999988888888889999999999999999999999999999999999999999999998874332222222222222


Q ss_pred             hhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHH-HHhHhhhhHHHhHh-------
Q psy17194        683 IIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-AYAIGPIVAGGIVD-------  754 (871)
Q Consensus       683 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~-g~~~gp~~~g~l~~-------  754 (871)
                      .+...++.+...+.++.+|++...   +.........|..|++.+|+++|+.|+..++ |++++|.+.|.+.|       
T Consensus       342 ~~~~~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~  418 (467)
T PRK09556        342 VYQHATSEYMYLASLFALGFLVFG---PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTP  418 (467)
T ss_pred             HHHhcCcHHHHHHHHHHHHHHHhh---HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccc
Confidence            222333433333444444432222   1112223334666688999999999999997 77999999999999       


Q ss_pred             -----hhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        755 -----AIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       755 -----~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                           ..||+.+|++.+++.+++....+++.
T Consensus       419 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~  449 (467)
T PRK09556        419 IFGYTLTGWAGTFAALDIAAIGCICLMAIVA  449 (467)
T ss_pred             cccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence                 67899999998888888765555543

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.96  E-value=3.5e-26  Score=255.36  Aligned_cols=369  Identities=14%  Similarity=0.085  Sum_probs=264.5

Q ss_pred             HHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHh
Q psy17194         49 STALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGAL  128 (871)
Q Consensus        49 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l  128 (871)
                      ..-++..++..+.....+|.+.++.|.                           |.+++|++..+...  .+..+++|++
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~---------------------------~~~~ig~~~~~~~~--~~~~~l~g~~   55 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTVEGL---------------------------DIQTIGFFSLVGQA--YIFKFLWAPL   55 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHH--HHHHHHHHHH
Confidence            344566778888889999999999876                           89999999777665  5889999999


Q ss_pred             hhhh-----CCch-HHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH
Q psy17194        129 IDRI-----GYDL-PMMIGLCIMFLSTALFACG---RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI  199 (871)
Q Consensus       129 ~Dr~-----Grr~-~l~~~~~~~~i~~~l~~~a---~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~  199 (871)
                      +||+     |||| .++++.++.+++..++++.   ++++.+++..++.++..+...++..+++.|++ |+++|+++.++
T Consensus        56 ~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~-~~~~r~~~~~~  134 (402)
T PRK11902         56 MDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVL-HPEERGAGAAV  134 (402)
T ss_pred             HHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ChhhhhHHHHH
Confidence            9999     8876 6888888888888887776   45788888888889999999999999999986 77889999999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhh-hCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC-CCCcccchhhhhcchhHHH
Q psy17194        200 ALAFISFGCLVAPPFGGALYQF-AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP-ESHSTVPIWKLFMDPYIAV  277 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~-~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  277 (871)
                      ...+.++|.++++.+++.+.+. +|||..|++.+++.++..+. .+..+|+++..+++++ +++...+.++++|+|.++.
T Consensus       135 ~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  213 (402)
T PRK11902        135 KVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWA  213 (402)
T ss_pred             HHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHH
Confidence            9999999999999999999885 59999999998887765544 3445543322111111 0112235667888988877


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhH-HhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH--
Q psy17194        278 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF-FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC--  354 (871)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--  354 (871)
                      .+...++..........+.+.++.+++|.++.+.+++..... ++.+++.++++++.||+++|+.+  ..+..+..+.  
T Consensus       214 ~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l--~~~~~~~~l~~l  291 (402)
T PRK11902        214 LLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL--MLFGVLQAVSNL  291 (402)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHHHHHHH
Confidence            666655555544443445555677778999999999876544 46888999999999999988854  3333322222  


Q ss_pred             -HHHhhcc-hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        355 -CFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       355 -~~~~~~~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                       ....+.. ++.+.+++..++..+..+.......+....+...   +..++..++.+....++..+++.++|.+.|..||
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~  368 (402)
T PRK11902        292 GYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNR---SFSATQYALLSALASVGRVYVGPTSGYLVEAYGW  368 (402)
T ss_pred             HHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence             2222333 3445444444443334333333344544444444   2234455666666778888778899999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHH
Q psy17194        433 TALNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~  453 (871)
                      +..|.+.+++.+++.++....
T Consensus       369 ~~~f~~~~~~~~~~~~~~~~~  389 (402)
T PRK11902        369 PGFYLMTVVIALPGLALLWLM  389 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999888877766555433

>TIGR00898 2A0119 cation transport protein

Probab=99.96  E-value=7.1e-27  Score=269.63  Aligned_cols=354  Identities=15%  Similarity=0.098  Sum_probs=255.2

Q ss_pred             hcccCCCCCCcccccCc---hhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q psy17194         87 ESRYHTKPHHREHAEGE---DSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFF  163 (871)
Q Consensus        87 ~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~  163 (871)
                      ++.....|...++++.+   ..+.+++.+++.++.++++++.|+++||+|||++++++.++.+++.++++++++++.+++
T Consensus       106 ~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~  185 (505)
T TIGR00898       106 YSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLV  185 (505)
T ss_pred             ecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence            33333445555666778   899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHH
Q psy17194        164 ARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLL  243 (871)
Q Consensus       164 ~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~  243 (871)
                      .|++.|++.+...+...+++.|++ |+++|+++.++...+..+|.++++.+++.+.+   ||+.|++.+++.++..+.. 
T Consensus       186 ~r~l~G~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-  260 (505)
T TIGR00898       186 FRLLVGMGIGGIWVQAVVLNTEFL-PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-  260 (505)
T ss_pred             HHHHHHhhccchHHHHHHHhheec-ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-
Confidence            999999999999999999999987 66899999999999999999999999876653   9999999998887766655 


Q ss_pred             Hhcccchhhhcc-------------------------------CC--CCCCcccchhhhhcchhHHHHHHHHHHHHHHHH
Q psy17194        244 LVMKPVKEQLNQ-------------------------------KK--PESHSTVPIWKLFMDPYIAVCSGALLMANVALA  290 (871)
Q Consensus       244 ~~~~~~~~~~~~-------------------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (871)
                      ++.||+++....                               ++  ++++.....++++++|.++...+...+..+...
T Consensus       261 ~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  340 (505)
T TIGR00898       261 WFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTA  340 (505)
T ss_pred             HhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHH
Confidence            555654421000                               00  000111345677888877766655544444433


Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhh--HHHH
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY--QMLM  368 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~  368 (871)
                      ......+.+. ..++.+..   .......+..+++.++.+++.||+|||+.+  ..+.++.+++.++..+.++.  +..+
T Consensus       341 ~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~  414 (505)
T TIGR00898       341 FSYYGLVLDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTM--AASLLLAGVALLLLLFVPVDLYFLRT  414 (505)
T ss_pred             HHHHHHhccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHcCCCchHHHH
Confidence            3333333333 23444432   333344667788899999999999999855  55555666665555544433  3333


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~  448 (871)
                      +..++.+++.+...   ........+.+|++.|++++|+.+....+|.+++|.+.+ + +..++...+++.+++.++..+
T Consensus       415 ~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~  489 (505)
T TIGR00898       415 ALAVLGKFGITSAF---QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGI  489 (505)
T ss_pred             HHHHHHHHHHHHHH---HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHH
Confidence            33344444444432   223344556677799999999999999999999999999 3 455677778887777777666


Q ss_pred             HHHHHhhc
Q psy17194        449 VLIYLKNI  456 (871)
Q Consensus       449 ~~~~~~~~  456 (871)
                      +.++++++
T Consensus       490 ~~~~lpet  497 (505)
T TIGR00898       490 LTLFLPET  497 (505)
T ss_pred             HHHcCcCC
Confidence            66665543

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.96  E-value=5.1e-27  Score=259.27  Aligned_cols=337  Identities=13%  Similarity=0.134  Sum_probs=248.5

Q ss_pred             HHHHHHHHHHHhhhhhhcccchh-HHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPD-YLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ...++++++.........|++|. +.+++|.                           ++.+.+++.+++.+++.+++++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------s~~~~~~~~~~~~~~~~~~~~~   56 (366)
T TIGR00886         4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGL---------------------------STAQLGNLVAVPVLAGAVLRII   56 (366)
T ss_pred             HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCC---------------------------CHHHhhHhhHHHHHHHHHHHHH
Confidence            35677777778888888999996 7777765                           8999999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHH
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFACGR-SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAF  203 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~  203 (871)
                      .|+++||+|||+.++++.++.+++.+++++++ +++.+++.|+++|++.+. .+...++++|++ |+++|++++++....
T Consensus        57 ~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~-~~~~r~~~~~~~~~~  134 (366)
T TIGR00886        57 LGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFF-PKKIQGTALGLAAGW  134 (366)
T ss_pred             HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhc-CHhhhhHHHHHHHHH
Confidence            99999999999999999999999999999999 999999999999999765 456789999987 668999999999988


Q ss_pred             HHHHHHHhHHHHHHHHhh----------hCChhHH-HHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc----------
Q psy17194        204 ISFGCLVAPPFGGALYQF----------AGKEIPF-LILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS----------  262 (871)
Q Consensus       204 ~~~G~~lg~~l~~~l~~~----------~gwr~~f-~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~----------  262 (871)
                      .++|..+++.+++.+.+.          .+||+.| +..+++..+..++.+.+.++.+++.+++++.+..          
T Consensus       135 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (366)
T TIGR00886       135 GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGA  214 (366)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchh
Confidence            888988888888776653          3899999 4445555555555555555433221111110000          


Q ss_pred             ccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHH
Q psy17194        263 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWL  342 (871)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  342 (871)
                      ....++.+++|.++......++..........+.|.|+++.+|.++.+.+.+.+...+..+++.++.|++.||+|+|+.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~  294 (366)
T TIGR00886       215 LGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL  294 (366)
T ss_pred             HHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH
Confidence            01456678888887777666666666667788899999999999999999988888899999999999999999998755


Q ss_pred             HHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHH
Q psy17194        343 MVAVGLVLEGLCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA  415 (871)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg  415 (871)
                      .........+...+......  +.+..+....+..++.+...+...+...+.    .++++|+++|+.+...++|
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~g~~~g~~~~~~~~g  365 (366)
T TIGR00886       295 LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHI----FRRATGAVSGLVGAIGNLG  365 (366)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhh----chhhcccHHHHHHHhccCC
Confidence            33333333333333333332  444444444444555554433334443333    2378999999988877654

>TIGR00892 2A0113 monocarboxylate transporter 1

Probab=99.96  E-value=5.3e-27  Score=265.23  Aligned_cols=373  Identities=13%  Similarity=0.100  Sum_probs=261.2

Q ss_pred             HHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH-HH
Q psy17194        294 PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP-IC  372 (871)
Q Consensus       294 ~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~  372 (871)
                      .+++. +.+++|.+..+.+++.+.+.+...++.++.|+++||+|||+.+  ..+..+..++.+.++++++.+.+++. ++
T Consensus        40 ~~~~~-i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  116 (455)
T TIGR00892        40 VFFKE-LQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVV--IAGGLLASLGMILASFSSNVIELYLTAGF  116 (455)
T ss_pred             hhHHH-HHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHH--HhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            33444 5667899999999999999888899999999999999999955  66677777777887788888776543 46


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      +.|++.+...+...   ..+.+.+ +++|+++.++.+.+..+|..++|.+.+.+.+..||++.|++.+++.++..+..++
T Consensus       117 l~G~~~~~~~~~~~---~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~  192 (455)
T TIGR00892       117 ITGLGLAFNFQPSL---TMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGAL  192 (455)
T ss_pred             HHHhcchhhhhHHH---HHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence            77877775422222   2223333 4789999999999999999999999999999999999999998877665554444


Q ss_pred             HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccc
Q psy17194        453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPST  532 (871)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (871)
                      .++....++..++     +   .+  +  ..+   +. .+. +  +.            +..+.                
T Consensus       193 ~~~~~~~~~~~~~-----~---~~--~--~~~---~~-~~~-~--~~------------~~~~~----------------  225 (455)
T TIGR00892       193 MRPVGPSQRVSKS-----K---SK--E--GLP---PD-GST-K--KL------------SKKST----------------  225 (455)
T ss_pred             hCCCCcccccccc-----c---cc--c--cCC---CC-Ccc-c--cc------------cccch----------------
Confidence            4321110000000     0   00  0  000   00 000 0  00            00000                


Q ss_pred             cCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHH
Q psy17194        533 GPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  612 (871)
Q Consensus       533 g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  612 (871)
                                                                       .+ ...+ ....+++++|+++...+..++..
T Consensus       226 -------------------------------------------------~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~  254 (455)
T TIGR00892       226 -------------------------------------------------AE-KINR-FLDFSLFTHRGFLVYLSGNVIMF  254 (455)
T ss_pred             -------------------------------------------------hh-hhhh-hcchHHhcCchHHHHHHHHHHHH
Confidence                                                             00 0000 00146889999998888888888


Q ss_pred             HHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhcc--CchhhHHHHHHHHHHhhHHhhhcchhhh
Q psy17194        613 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--PTYQWLMVAVGLVLEGLCCFIIPFSTSY  690 (871)
Q Consensus       613 ~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~--~~~~~~~~~~g~~~~~~~l~~~~~~~~~  690 (871)
                      ..++....++|.|+++ +|++..+.|++++..+++.++++++.|++.||.  ++++...+..+..+.+++++++....+.
T Consensus       255 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~  333 (455)
T TIGR00892       255 LGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDY  333 (455)
T ss_pred             HHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence            8888888899999865 799999999999999999999999999999974  3333333334444445555555555566


Q ss_pred             HHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHH
Q psy17194        691 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMN  769 (871)
Q Consensus       691 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~  769 (871)
                      +.+++..+..|++.+...+...+...+.++   ++++|++.|++++..++|+++||.++|.+.|..| |++.|++.+++.
T Consensus       334 ~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~  410 (455)
T TIGR00892       334 TGLVIYCIFFGLSFGSVGALLFEVLMDLVG---AQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIV  410 (455)
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHHHHHHhh---HHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHH
Confidence            666667777777777665555555555444   7889999999999999999999999999999884 999998888877


Q ss_pred             HHHHHH
Q psy17194        770 ILYAPV  775 (871)
Q Consensus       770 ~~~~~~  775 (871)
                      ++++..
T Consensus       411 li~~~~  416 (455)
T TIGR00892       411 VSAGLF  416 (455)
T ss_pred             HHHHHH
Confidence            666543

>TIGR00896 CynX cyanate transporter

Probab=99.96  E-value=1.5e-26  Score=254.01  Aligned_cols=336  Identities=16%  Similarity=0.125  Sum_probs=254.6

Q ss_pred             HHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCC
Q psy17194         55 DNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGY  134 (871)
Q Consensus        55 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr  134 (871)
                      .........|++|.+.+++|.                           ++.+.|++.+++.+++.++.++.|+++||+||
T Consensus        12 ~~~~~~~~~~~lp~l~~~~~~---------------------------s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~   64 (355)
T TIGR00896        12 LRPALTSVGPLLPQIRSALGM---------------------------SFSVAGLLTALPVLCFAVLAPLAPWLARRFGE   64 (355)
T ss_pred             ccCccccCcccHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCc
Confidence            334446678999999999876                           89999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHH
Q psy17194        135 DLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPF  214 (871)
Q Consensus       135 r~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l  214 (871)
                      |+++.++.++.+++.+.+ .+++++.+++.|++.|++.+...+....++.|++ | ++|++++++++...++|..+++.+
T Consensus        65 r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~i~~~~  141 (355)
T TIGR00896        65 ERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDF-P-QRVGLMTGLYSMALMGGAALAAAA  141 (355)
T ss_pred             hHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhC-c-chhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988888877 7789999999999999999998888888999976 5 589999999999999999999999


Q ss_pred             HHHHHhhh--CChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHH
Q psy17194        215 GGALYQFA--GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFL  292 (871)
Q Consensus       215 ~~~l~~~~--gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (871)
                      ++.+.+..  +||+.|.+.+++.++..+   ...++.+++.++  +++......++.+|+|.++......++....+...
T Consensus       142 ~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (355)
T TIGR00896       142 TVPLAQHSGGHWQQALAWWALPALLALL---AWIPQVRRRVAA--NQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSL  216 (355)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhhhccccCC--CCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHH
Confidence            99888765  399998877665444322   222322221111  11111234567788888877666666666666777


Q ss_pred             HHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHH
Q psy17194        293 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPIC  372 (871)
Q Consensus       293 ~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  372 (871)
                      ..++|.|+++ .|.+..+.+...+...++.++++++.|++.||+++|+.. +..+..+.+++.+.+.+..+..... ..+
T Consensus       217 ~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  293 (355)
T TIGR00896       217 IGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGI-VAVLAVLQLVGLCGLLFAPMHGLWA-WAL  293 (355)
T ss_pred             HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHH-HHHHHHHHHHHHHHHHHhhhhHHHH-HHH
Confidence            7889999876 699999999999999999999999999999999544422 2344445555554444443322222 345


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~-~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      +.|++.+...+...+..   .+.. ++++++...++.+....++.+++|.+.|.+.|+.|
T Consensus       294 l~g~~~g~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g  350 (355)
T TIGR00896       294 VLGLGQGGAFPLALTLI---GLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG  350 (355)
T ss_pred             HHHHhhhhHhHHHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            66777776644333332   2222 34677899999999999999999999999999887

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.96  E-value=9.7e-27  Score=267.17  Aligned_cols=386  Identities=15%  Similarity=0.065  Sum_probs=258.1

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      +++.+.+..++.++++++...+..+.|.+..++..                      ++...+..+.+++.+.+.+++.+
T Consensus        14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~ig~~i   71 (502)
T TIGR00887        14 HFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH----------------------GKGPLPSSVSAAVNGSASIGTLA   71 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------------CcccchHHHHHHHHHHHHHHHHH
Confidence            34566677888899999999998888877664210                      01134667889999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRS------YGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERS  194 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s------~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~  194 (871)
                      +.+++|+++||+|||+++.++.++..++.++++++++      ++.++++|+++|++.|...+....+++|++ |+++|+
T Consensus        72 g~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~-p~~~Rg  150 (502)
T TIGR00887        72 GQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFA-TKKWRG  150 (502)
T ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhc-ChhhHH
Confidence            9999999999999999999999999999999888765      789999999999999999999999999986 678999


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHh-----------------------hhCChhHHHHHHHHHHHHHHHHHHhcccchh
Q psy17194        195 QALGIALAFISFGCLVAPPFGGALYQ-----------------------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKE  251 (871)
Q Consensus       195 ~~~g~~~~~~~~G~~lg~~l~~~l~~-----------------------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~  251 (871)
                      +++++.+....+|.++++.++..+..                       .++||++|.+.++.+++..+ ..++.||+|+
T Consensus       151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr  229 (502)
T TIGR00887       151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPR  229 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHH
Confidence            99999999999999999998876542                       24799999887777665444 4456677653


Q ss_pred             h----hcc-C--------------CCCCC-----------cccchhhhhcc---hhH-HHH---HHHHHHHHHHHHHHHH
Q psy17194        252 Q----LNQ-K--------------KPESH-----------STVPIWKLFMD---PYI-AVC---SGALLMANVALAFLEP  294 (871)
Q Consensus       252 ~----~~~-~--------------~~~~~-----------~~~~~~~~~~~---~~~-~~~---~~~~~~~~~~~~~~~~  294 (871)
                      -    .++ +              +++.+           ...++++++++   ++. ...   ....+...+.++....
T Consensus       230 ~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~  309 (502)
T TIGR00887       230 YTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNL  309 (502)
T ss_pred             HHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHcccc
Confidence            1    010 0              00000           00134445542   111 111   1122222333344455


Q ss_pred             HHHHHHHHhhCCCchhHHH------------HHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch
Q psy17194        295 TISLWIEDNLTTDNWKIGM------------IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST  362 (871)
Q Consensus       295 ~~~~~l~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (871)
                      +.|.++++ .|.+....+.            ......++.+++.++.++++||+|||+.+  ..+..+.+++.++.....
T Consensus       310 ~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l--~~~~~~~~~~~~~l~~~~  386 (502)
T TIGR00887       310 NQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ--LMGFFILTVLFFVLGFAY  386 (502)
T ss_pred             ccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH--HHHHHHHHHHHHHHHHHH
Confidence            56777754 5776432211            12233456667888999999999999865  444444444443333221


Q ss_pred             h---hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh----------
Q psy17194        363 S---YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA----------  429 (871)
Q Consensus       363 ~---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~----------  429 (871)
                      +   ........++..+..+..  ..........+.+|++.|+++.|+.+....++++++|.+.+.+.+.          
T Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  464 (502)
T TIGR00887       387 NHLSTHGFLAIYVLAQFFANFG--PNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTG  464 (502)
T ss_pred             HhcchhHHHHHHHHHHHHHhcC--CCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccc
Confidence            1   111111111111111111  0111222345667889999999999999999999999999999884          


Q ss_pred             hChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        430 IGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       430 ~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .++...|++.+++.++..+..+++++
T Consensus       465 ~~~~~~~~i~~~~~~~~~i~~~~lpE  490 (502)
T TIGR00887       465 IWMGHVLEIFALFMFLGILFTLLIPE  490 (502)
T ss_pred             ccchHHHHHHHHHHHHHHHHheEecc
Confidence            34556777777766666554444444

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.96  E-value=3e-26  Score=255.53  Aligned_cols=368  Identities=14%  Similarity=0.181  Sum_probs=269.4

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      +.+....++.........|.+|.+..+ +|                           .++.+.|++.+++.+++.+++++
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------------------------~s~~~~g~~~~~~~l~~~i~~~~   57 (396)
T TIGR00882         5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNG---------------------------LSKTDTGIVFSCISLFSILFQPL   57 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------------CCHHHHHHHHHHHHHHHHHHHHH
Confidence            445556667777788888999988765 44                           48999999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHH---Hhh-----hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALF---ACG-----RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~---~~a-----~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      .|+++||+|||+.++.+.+..+++....   .+.     +.+..+++.|++.|++.+...+...+++.|. .  +++++.
T Consensus        58 ~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~--~~~~~~  134 (396)
T TIGR00882        58 FGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV-S--RNSNFE  134 (396)
T ss_pred             HHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh-h--hhcccc
Confidence            9999999999999988776665544322   122     2234456678999999988888888887774 2  345567


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC-----CCCCCcccchhhhhc
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK-----KPESHSTVPIWKLFM  271 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  271 (871)
                      +|......++|.++||.+++.+.+ .+||.+|++.+++.++..++.+...++++++.+.+     ++++++..+.++.+|
T Consensus       135 ~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  213 (396)
T TIGR00882       135 YGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFR  213 (396)
T ss_pred             cchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHc
Confidence            788888899999999999998866 49999999998888877766655555543321111     111122345677889


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNL---TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      ||.++......+.....+.....+.+.|+++.+   +.+....|...+...+...++.+..+++.||+|+|+.+  ..+.
T Consensus       214 ~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l--~~~~  291 (396)
T TIGR00882       214 QRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNAL--LIAG  291 (396)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH--HHHH
Confidence            988876666555555555556567788877765   44556678888888888888999999999999999855  5666


Q ss_pred             HHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhh-hhhhhccccccchhhHHHH-HHHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPT-LGYLVDVRYVSVYGSIYAI-ADISYSLAYAIGPIVAGGI  426 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~-~~~~~~~~~~~~rg~a~gi-~~~~~~lg~~igp~l~g~l  426 (871)
                      .+.++........++.+.++...++.+++....    ... ..+..+..+++.++++.+. .+....+|.+++|.+.|++
T Consensus       292 ~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~----~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l  367 (396)
T TIGR00882       292 TIMSVRIIGSSFATTALEVVILKMLHAFEVPFL----LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNM  367 (396)
T ss_pred             HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHH
Confidence            666666666666777777776667777665443    222 2223333445666776666 6788999999999999999


Q ss_pred             HhhhChhhHHHHHHHHHHHHHHHH
Q psy17194        427 VDAIGFTALNFLIAFMNILYAPVL  450 (871)
Q Consensus       427 ~~~~g~~~~f~~~~~~~~~~~~~~  450 (871)
                      .|..||+..|.+.+++.++..++.
T Consensus       368 ~~~~G~~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       368 YDSIGFQGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             HHhcccHHHHHHHHHHHHHHHHHH
Confidence            999999999999888877665543

>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional

Probab=99.96  E-value=4.1e-26  Score=258.54  Aligned_cols=377  Identities=10%  Similarity=0.020  Sum_probs=245.9

Q ss_pred             HHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc----hhhHHHHH
Q psy17194        294 PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----TSYQMLML  369 (871)
Q Consensus       294 ~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~  369 (871)
                      ...| ++.++ |.+..+.++..+...++..+++++.|+++||+|+|+++  ..+..+.+++.+.+++.    .+.+.+++
T Consensus        50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  125 (452)
T PRK11273         50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILAAAVMLFMGFVPWATSSIAVMFV  125 (452)
T ss_pred             HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhH--HHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence            3344 56676 99999999999999999999999999999999999955  66666666666666543    35666777


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHH-HHHHHHHHHhhhChhhHHHHHHHHHHHHHH
Q psy17194        370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAI-GPIVAGGIVDAIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       370 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~i-gp~l~g~l~~~~g~~~~f~~~~~~~~~~~~  448 (871)
                      .+++.|++.+...+....   .+.+.+++++|++++++.+....+|..+ +|.+...+....||++.|++.+++.++..+
T Consensus       126 ~~~l~gi~~g~~~~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~  202 (452)
T PRK11273        126 LLFLCGWFQGMGWPPCGR---TMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVAL  202 (452)
T ss_pred             HHHHHHHHHhccchHHHH---HHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence            778888887765333333   3445566789999999999999988754 555443444445999999988876666544


Q ss_pred             HHH-HHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        449 VLI-YLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       449 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      +.+ +.++..+.....+++ +.            + ++.++         +.+      +++.     .+          
T Consensus       203 l~~~~~~~~~~~~~~~~~~-~~------------~-~~~~~---------~~~------~~~~-----~~----------  238 (452)
T PRK11273        203 FAFAMMRDTPQSCGLPPIE-EY------------K-NDYPD---------DYN------EKHE-----QE----------  238 (452)
T ss_pred             HHHHHccCCHhhcCCCChh-hh------------h-hcccc---------ccc------cccC-----CC----------
Confidence            433 333211100000000 00            0 00000         000      0000     00          


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc-hhhhccchhHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP-IWKLFMDPYIAVCSG  606 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~  606 (871)
                                                                             ++.   +.. ...++|+|.++...+
T Consensus       239 -------------------------------------------------------~~~---~~~~~~~~~~~~~~~~~~l  260 (452)
T PRK11273        239 -------------------------------------------------------LTA---KQIFMQYVLPNKLLWYIAI  260 (452)
T ss_pred             -------------------------------------------------------ccH---HHHHHHHHHcChHHHHHHH
Confidence                                                                   000   000 134778999999888


Q ss_pred             HHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchh-hHHHHHHHHHHhhHHh--h
Q psy17194        607 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ-WLMVAVGLVLEGLCCF--I  683 (871)
Q Consensus       607 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~-~~~~~~g~~~~~~~l~--~  683 (871)
                      ..++.+...++...++|.|+++.+|++..+++.++....++.+++.++.|+++||++++| .........+..++++  +
T Consensus       261 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~  340 (452)
T PRK11273        261 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYW  340 (452)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHH
Confidence            888888888888999999999989999999999999999999999999999999984322 1111122222222222  2


Q ss_pred             hcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhH-hhhhHHHhHhhhChHHHH
Q psy17194        684 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAI-GPIVAGGIVDAIGFTALN  762 (871)
Q Consensus       684 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~-gp~~~g~l~~~~g~~~~~  762 (871)
                      +....+.+..+..+.++|.+....   .........|..|++.+|+++|+++...++|+++ ||.+.|.+.|+.||+..|
T Consensus       341 ~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f  417 (452)
T PRK11273        341 LNPAGNPTVDMACMIVIGFLIYGP---VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGF  417 (452)
T ss_pred             HhcccChHHHHHHHHHHHHHHHhH---HHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHH
Confidence            222223333333333444322211   1112223346666889999999999999998765 799999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcc
Q psy17194        763 FLIAFMNILYAPVLIYLKNI  782 (871)
Q Consensus       763 ~~~a~~~~~~~~~~~~~~~~  782 (871)
                      .++++++++++.....+.+.
T Consensus       418 ~~~~~~~~~~~~~~~~~~~~  437 (452)
T PRK11273        418 MVMIGGSILAVILLIVVMIG  437 (452)
T ss_pred             HHHHHHHHHHHHHHHHHhcc
Confidence            98888888877666655544

>TIGR00893 2A0114 d-galactonate transporter

Probab=99.96  E-value=1.4e-26  Score=258.64  Aligned_cols=372  Identities=14%  Similarity=0.111  Sum_probs=262.4

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFG  377 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g  377 (871)
                      .++++++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+++...+++.++.+.+++.+++.|++
T Consensus        18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~   95 (399)
T TIGR00893        18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTL--AVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAA   95 (399)
T ss_pred             HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceee--HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            346778999999999999999999999999999999999999955  667777777777888888999999999999999


Q ss_pred             HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcc
Q psy17194        378 MALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIY  457 (871)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~  457 (871)
                      .+...+.....   +.+..|+++|++++++.+....+|..++|.+.+.+.+..+|++.|++.+++.++..++.++..+.+
T Consensus        96 ~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
T TIGR00893        96 EAPFFPGIILI---VASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP  172 (399)
T ss_pred             HHhhhhHHHHH---HHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence            88774444444   344456689999999999999999999999999999999999999988877666555444332211


Q ss_pred             cCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccc
Q psy17194        458 DFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPET  537 (871)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  537 (871)
                      ++++...++++ ++            .   .. +   . ...       +.. .                          
T Consensus       173 ~~~~~~~~~~~-~~------------~---~~-~---~-~~~-------~~~-~--------------------------  197 (399)
T TIGR00893       173 PQKAKWLTEEE-KY------------I---VV-G---G-LLA-------EQQ-G--------------------------  197 (399)
T ss_pred             CCccccCCHHH-Hh------------h---cc-h---h-hcc-------ccc-c--------------------------
Confidence            11100000000 00            0   00 0   0 000       000 0                          


Q ss_pred             cchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHH
Q psy17194        538 PPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAF  617 (871)
Q Consensus       538 ~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  617 (871)
                                                                  .++....+...++++++|+++...+..++.....+.
T Consensus       198 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (399)
T TIGR00893       198 --------------------------------------------KGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGF  233 (399)
T ss_pred             --------------------------------------------ccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHH
Confidence                                                        000000111346788999999988888888889999


Q ss_pred             hhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHH------HHHHHHHHhhHHhhhcchhhhH
Q psy17194        618 LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLM------VAVGLVLEGLCCFIIPFSTSYQ  691 (871)
Q Consensus       618 ~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~------~~~g~~~~~~~l~~~~~~~~~~  691 (871)
                      +..++|.|+++.+|++..+.|++.....++.+++.++.|++.||+++|+...      ...+..+..+..+.....++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (399)
T TIGR00893       234 FLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPY  313 (399)
T ss_pred             HHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHH
Confidence            9999999999999999999999999999999999999999999999875111      1111111122222222222333


Q ss_pred             HHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHH
Q psy17194        692 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNI  770 (871)
Q Consensus       692 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~  770 (871)
                      ..+......+++.+ ..+...+...+..   |++.+|++.|+.+.+.++|+.+||.+.|.+.|..| +++.+.+.+++.+
T Consensus       314 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~  389 (399)
T TIGR00893       314 AALALVALGFFGLG-AGAIGWALISDNA---PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALAL  389 (399)
T ss_pred             HHHHHHHHHHhchh-hhhHHHHHHHhhc---ChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHH
Confidence            33222222233333 3444444444444   48889999999999999999999999999999999 9999988888777


Q ss_pred             HHHHHHH
Q psy17194        771 LYAPVLI  777 (871)
Q Consensus       771 ~~~~~~~  777 (871)
                      ++....+
T Consensus       390 ~~~~~~~  396 (399)
T TIGR00893       390 IGALSYL  396 (399)
T ss_pred             HHHHHHH
Confidence            7664443

>PRK10489 enterobactin exporter EntS; Provisional

Probab=99.96  E-value=8.3e-27  Score=261.98  Aligned_cols=382  Identities=15%  Similarity=0.064  Sum_probs=268.9

Q ss_pred             chhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHH
Q psy17194        265 PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV  344 (871)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~  344 (871)
                      +.+.+.+++.++......++..+........+|.+.++ ++.++.+.|++.+...++..+++++.|+++||+|||+.+  
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l--   85 (417)
T PRK10489          9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLI--   85 (417)
T ss_pred             HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEE--
Confidence            44445568888887777777777877778888887655 577999999999999999999999999999999999855  


Q ss_pred             HHHHHHHHHHHHHhh-----cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy17194        345 AVGLVLEGLCCFIIP-----FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  419 (871)
Q Consensus       345 ~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~ig  419 (871)
                      ..+..+.+++.+...     ..++.+.+++.+++.+++.+...+......   .+..++++|+++.++.+...++|..+|
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~g  162 (417)
T PRK10489         86 LLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAAT---PALVGRENLMQAGAITMLTVRLGSVIS  162 (417)
T ss_pred             EehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhh---hhccCHHHHHHHHHHHHHHHhHHHHhH
Confidence            344444443333222     245667777778888887776544443333   344456889999999999999999999


Q ss_pred             HHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccc
Q psy17194        420 PIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEY  499 (871)
Q Consensus       420 p~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (871)
                      |.++|.+.+..||++.|++.++..++..++.+..++.++                ++       ++. +  +    ..+.
T Consensus       163 ~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----------------~~-------~~~-~--~----~~~~  212 (417)
T PRK10489        163 PALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPP----------------PP-------QPR-E--H----PLRS  212 (417)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCC----------------CC-------ccc-c--c----chHH
Confidence            999999999999999998877666555444332221000                00       000 0  0    0000


Q ss_pred             cccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhh
Q psy17194        500 SMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL  579 (871)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  579 (871)
                                                                                                      
T Consensus       213 --------------------------------------------------------------------------------  212 (417)
T PRK10489        213 --------------------------------------------------------------------------------  212 (417)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhh
Q psy17194        580 NQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLA  659 (871)
Q Consensus       580 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~  659 (871)
                              ...+++.++++|.+....+..++.. .......++|.|+++.+|+++.+.|+++...+++.+++.++.+++.
T Consensus       213 --------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~  283 (417)
T PRK10489        213 --------LLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLA  283 (417)
T ss_pred             --------HHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhh
Confidence                    0001344667777665544444332 2356677899999888999999999999999999999999999999


Q ss_pred             hccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHH
Q psy17194        660 KLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS  739 (871)
Q Consensus       660 d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~  739 (871)
                      ||.++++  .+..+..+.+++++.+...++.+...+..+.+|++.+...+...+...   +..|++.+|++.|++++..+
T Consensus       284 ~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~p~~~~g~~~g~~~~~~~  358 (417)
T PRK10489        284 HSARPGL--LMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQ---TQTPDEMLGRINGLWTAQNV  358 (417)
T ss_pred             hccCcch--HHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHh
Confidence            9876655  444555566666666655565555555666666666554333333333   33447789999999999999


Q ss_pred             HHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHH
Q psy17194        740 LAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVL  776 (871)
Q Consensus       740 ~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~  776 (871)
                      +|+.+||.+.|.+.|..|++.++.+.+++.++...+.
T Consensus       359 ~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~  395 (417)
T PRK10489        359 TGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLL  395 (417)
T ss_pred             hhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999989888877666655443

>PLN00028 nitrate transmembrane transporter; Provisional

Probab=99.96  E-value=2.6e-26  Score=260.93  Aligned_cols=368  Identities=12%  Similarity=0.068  Sum_probs=246.7

Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP  370 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  370 (871)
                      ...+..| .+.+++|++..+.+++.+.+.++..++.++.|+++||+|+|+.+  ..+.++.+++.++.+++++.+.+++.
T Consensus        54 ~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~--~~~~~~~~~~~~~~~~~~s~~~l~~~  130 (476)
T PLN00028         54 AAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGS--AFLLMLTAPAVFCMSLVSSATGFIAV  130 (476)
T ss_pred             HHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            3344444 46778999999999999999999999999999999999999855  66777777777777888888888888


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---------hhChhhHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD---------AIGFTALNFLIAF  441 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~---------~~g~~~~f~~~~~  441 (871)
                      +++.|++.+..    .+....+.+.+|+++||+++|+.+...++|..+++.+.+.+..         ..|||+.|++.++
T Consensus       131 r~l~G~~~~~~----~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~  206 (476)
T PLN00028        131 RFFIGFSLATF----VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGL  206 (476)
T ss_pred             HHHHHHHHHhh----HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHH
Confidence            88888877643    2222334555677899999999988888888888777665533         2489999999888


Q ss_pred             HHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCC
Q psy17194        442 MNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGV  521 (871)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (871)
                      +.++..++.+++.+...+.                ..++  .+ .+.         +.            +         
T Consensus       207 l~l~~~l~~~~~~~~~p~~----------------~~~~--~~-~~~---------~~------------~---------  237 (476)
T PLN00028        207 LHIIMGILVLTLGQDLPDG----------------NYRE--LK-KSG---------TM------------P---------  237 (476)
T ss_pred             HHHHHHHHHHHHcCcCCCC----------------chhh--HH-hcC---------cc------------c---------
Confidence            7776655554443210000                0000  00 000         00            0         


Q ss_pred             cchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhH
Q psy17194        522 SNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYI  601 (871)
Q Consensus       522 ~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  601 (871)
                                                                                     ..+....+++.++++++
T Consensus       238 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~  254 (476)
T PLN00028        238 ---------------------------------------------------------------KDSFSKVLRYGVTNYRT  254 (476)
T ss_pred             ---------------------------------------------------------------cccHHHHHHHHHcCchh
Confidence                                                                           00000013556788888


Q ss_pred             HHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCch-----hhHHHHHHHHH
Q psy17194        602 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY-----QWLMVAVGLVL  676 (871)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~-----~~~~~~~g~~~  676 (871)
                      +...+..++.....+.+..++|.|+++.+|+++.+++++.....++.++++++.|+++||+++|     |+....+...+
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l  334 (476)
T PLN00028        255 WILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTL  334 (476)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHH
Confidence            7776666666666667778899999888999999999999999999999999999999999864     33343444444


Q ss_pred             HhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhh
Q psy17194        677 EGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  756 (871)
Q Consensus       677 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~  756 (871)
                      .++++++++...+.+..++.+++++++.+.......+...+    ..++.+|+++|+.+...++|+.++|.+.+ ..+..
T Consensus       335 ~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~  409 (476)
T PLN00028        335 GGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF----VSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSY  409 (476)
T ss_pred             HHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc----cChhhchhhhhhhhccccHHHHHHHHHHH-hcCCc
Confidence            44444445554444444444444455443333322222222    22567899999987766666666665543 11234


Q ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17194        757 GFTALNFLIAFMNILYAPVLIYLKNI  782 (871)
Q Consensus       757 g~~~~~~~~a~~~~~~~~~~~~~~~~  782 (871)
                      +|..+|.+.+++.++++++.++.+.+
T Consensus       410 ~y~~~f~~~~~~~~i~~~~~~~~~~~  435 (476)
T PLN00028        410 STETGISLMGVMIIACTLPVAFIHFP  435 (476)
T ss_pred             cHhhHHHHHHHHHHHHHHHHHheecc
Confidence            68999999988888877766665533

>TIGR02332 HpaX 4-hydroxyphenylacetate permease

Probab=99.96  E-value=1.7e-26  Score=257.92  Aligned_cols=383  Identities=15%  Similarity=0.138  Sum_probs=254.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch
Q psy17194        283 LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST  362 (871)
Q Consensus       283 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~  362 (871)
                      ++............| .+++++|++..+.+++.+.+.++..+++++.|++.||+|||+.+  ..++++.+++.+++++++
T Consensus        18 ~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~--~~~~~~~~~~~~~~~~~~   94 (412)
T TIGR02332        18 IFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWI--AGIMVLWGIASTATMFAT   94 (412)
T ss_pred             HHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHH--HHHHHHHHHHHHHHHHhc
Confidence            333333344444444 67888999999999999999999999999999999999999955  778888888888888889


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh------hhChhhHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD------AIGFTALN  436 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~------~~g~~~~f  436 (871)
                      +.+.+++.+++.|++.+...+...   ..+.+.+|+++|++++++++....+|..+++.+++++.+      ..|||+.|
T Consensus        95 ~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f  171 (412)
T TIGR02332        95 GPESLYLLRILVGIAEAGFLPGIL---LYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLF  171 (412)
T ss_pred             CHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHH
Confidence            999999999999999988743333   334445566899999999999999999999999999875      36999999


Q ss_pred             HHHHHHHHHHHHHHHHH-hhcccCCCC-chhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccc
Q psy17194        437 FLIAFMNILYAPVLIYL-KNIYDFKPF-ENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       437 ~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      ++.++..++..++.++. ++.+++.+. .+++++..                       ++..+.++.+  .++.+. ..
T Consensus       172 ~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~-----------------------~~~~~~~~~~--~~~~~~-~~  225 (412)
T TIGR02332       172 LLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKAL-----------------------KEMIDNDQLT--LEQPEG-AF  225 (412)
T ss_pred             HHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHH-----------------------HHHHHhcccc--cccccc-cc
Confidence            99887776655444333 322211110 00000000                       0000000000  000000 00


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  594 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  594 (871)
                       .                                                                  ++..+....+++
T Consensus       226 -~------------------------------------------------------------------~~~~~~~~~~~~  238 (412)
T TIGR02332       226 -A------------------------------------------------------------------HAAMPQRSMLRE  238 (412)
T ss_pred             -c------------------------------------------------------------------cccccHHHHHHH
Confidence             0                                                                  000000012333


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHH-hcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHH
Q psy17194        595 LFMDPYIAVCSGALLMANVALAFLEPTISLWIED-NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  673 (871)
Q Consensus       595 l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g  673 (871)
                      ++ +|.++...+..++....++.+.+++|.|+++ .+|++..+.+.+..+..++.+++.++.|+++||+++|+.. ....
T Consensus       239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~-~~~~  316 (412)
T TIGR02332       239 IF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHH-TALP  316 (412)
T ss_pred             hc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHH-HHHH
Confidence            44 5778888888888888899999999999977 3578899999999999999999999999999999876632 2223


Q ss_pred             HHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        674 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       674 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      ..+.++++.+.....+....+..+...++|.....+   .......+..++++++++.|+.|...++|++++|.+.|.+.
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~  393 (412)
T TIGR02332       317 YLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMA---IFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILK  393 (412)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhh---HHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccccc
Confidence            333333332221121212112222222332222111   11122223345788999999999999999999999999999


Q ss_pred             hhhC-hHHHHHHHHHHH
Q psy17194        754 DAIG-FTALNFLIAFMN  769 (871)
Q Consensus       754 ~~~g-~~~~~~~~a~~~  769 (871)
                      |..| |++++++.+++.
T Consensus       394 ~~~g~~~~~~~~~~~~~  410 (412)
T TIGR02332       394 DATGSFNSGLWFVAALL  410 (412)
T ss_pred             ccCCCCchhHHHHHHHH
Confidence            9885 898888776544

This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.

>PRK10091 MFS transport protein AraJ; Provisional

Probab=99.95  E-value=1.6e-25  Score=248.14  Aligned_cols=370  Identities=14%  Similarity=0.090  Sum_probs=261.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.++.+....+..........+.+|.+ ++++|.+..+.+++.+.+.++..+++++.|++.||+|||+.+  ..+..+.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~   79 (382)
T PRK10091          3 KVILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHIL--LFLVALCV   79 (382)
T ss_pred             chHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHH--HHHHHHHH
Confidence            445566666677777777777778774 567899999999999999999999999999999999999955  67777788


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        353 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       353 ~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ++.++++++++.+.+++.+++.|++.+...+.......+   ..++++|++++++......+|..++|++++.+.+..||
T Consensus        80 ~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gw  156 (382)
T PRK10091         80 IGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSK---IIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSW  156 (382)
T ss_pred             HHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccH
Confidence            888888899999999999999999988764444333333   34557899999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCc
Q psy17194        433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      |+.|++.+++.++..+..++..+..   +   +          + .      + .+.        +              
T Consensus       157 r~~f~~~~~~~~~~~~~~~~~lp~~---~---~----------~-~------~-~~~--------~--------------  190 (382)
T PRK10091        157 RYTFLLIAVFNIAVLASIYFWVPDI---R---D----------E-A------K-GGL--------R--------------  190 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCC---C---c----------c-c------c-cCH--------H--------------
Confidence            9999998876655544332211100   0   0          0 0      0 000        0              


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                                                                                                    ..
T Consensus       191 ------------------------------------------------------------------------------~~  192 (382)
T PRK10091        191 ------------------------------------------------------------------------------EQ  192 (382)
T ss_pred             ------------------------------------------------------------------------------HH
Confidence                                                                                          00


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHH
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  672 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~  672 (871)
                      .+.++++.++......++.+...+....+++.|+++.+|+++.+.+++....+++.++++++.|++.||+++++  ....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~--~~~~  270 (382)
T PRK10091        193 FHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR--IAAV  270 (382)
T ss_pred             HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh--HHHH
Confidence            22345555555544444555555555667788888889999999999999999999999999999999999887  4445


Q ss_pred             HHHHHhhHHhhhcc-hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc-cccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        673 GLVLEGLCCFIIPF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       673 g~~~~~~~l~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      +..+.+++++.+.. .++.+..++..+..+++.+...++..   ....+.. +.+..+.  +..+..+++|.++||.++|
T Consensus       271 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~g~~~Gp~~~G  345 (382)
T PRK10091        271 TDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ---ILLLQNAKGGELLGA--AGGQIAFNLGSAIGAYCGG  345 (382)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH---HHHHHhCCcchHHHH--HHHHHHHHHHHHHHHHHhH
Confidence            55555555544432 33333344444444454443333222   2222322 1333333  3457889999999999999


Q ss_pred             HhHhh-hChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        751 GIVDA-IGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       751 ~l~~~-~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      .+.|+ .+|++.+.+.++++++........
T Consensus       346 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (382)
T PRK10091        346 MMLTLGLAYNYVALPAALLSFAAMSSLLLY  375 (382)
T ss_pred             HHHHcccCcchHHHHHHHHHHHHHHHHHHH
Confidence            99995 689999998888877766444443

>PRK09705 cynX putative cyanate transporter; Provisional

Probab=99.95  E-value=9.3e-26  Score=250.66  Aligned_cols=351  Identities=9%  Similarity=0.034  Sum_probs=252.7

Q ss_pred             HHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q psy17194        290 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLML  369 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  369 (871)
                      ....+.+|. +++++|+|..+.+++.+.+.++..+++++.|++.||+|||+++  ..+..+.+++.+.++++++++.+++
T Consensus        26 ~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l--~~~~~l~~~~~~~~~~a~~~~~ll~  102 (393)
T PRK09705         26 TSVGPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSV--AISLLLIAVGALMRELYPQSALLLS  102 (393)
T ss_pred             hccchhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHH--HHHHHHHHHHHHHHHHCcchHHHHH
Confidence            344556665 5677999999999999999999999999999999999999955  8889999999999999999999999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-ChhhHHHHHHHHHHHHHH
Q psy17194        370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-GFTALNFLIAFMNILYAP  448 (871)
Q Consensus       370 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-g~~~~f~~~~~~~~~~~~  448 (871)
                      .+++.|++.+...+....    +..+.++++|++++++......+|..+++.+++.+.++. +|++.+.+.++..++.++
T Consensus       103 ~r~l~Gig~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~  178 (393)
T PRK09705        103 SALLGGVGIGIIQAVMPS----VIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF  178 (393)
T ss_pred             HHHHHHhHHHHHhhhhhH----HHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence            999999999976433333    233334588999999999999999999999999999886 899988776555443332


Q ss_pred             HHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhc
Q psy17194        449 VLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKAS  528 (871)
Q Consensus       449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (871)
                      ..+...+  ++ +            +++        +. +         +.                             
T Consensus       179 ~~~~~~~--~~-~------------~~~--------~~-~---------~~-----------------------------  196 (393)
T PRK09705        179 AWWWQSA--RE-V------------ASS--------HK-T---------TT-----------------------------  196 (393)
T ss_pred             HHHHHhc--CC-C------------ccc--------cC-C---------Cc-----------------------------
Confidence            2222111  00 0            000        00 0         00                             


Q ss_pred             cccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHH
Q psy17194        529 APSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL  608 (871)
Q Consensus       529 ~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  608 (871)
                                                                                    ..++.+++|..+...+..
T Consensus       197 --------------------------------------------------------------~~~~~l~~~~~~~l~~~~  214 (393)
T PRK09705        197 --------------------------------------------------------------TPVRVVFTPRAWTLGVYF  214 (393)
T ss_pred             --------------------------------------------------------------CCcccccCHhHHHHHHHH
Confidence                                                                          002234566666666666


Q ss_pred             HHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcc-h
Q psy17194        609 LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF-S  687 (871)
Q Consensus       609 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~-~  687 (871)
                      ++....+++...++|.|+++ +|++..+.|++....+++.++++++.|++.||+++|+  ....++.+.++++..+.+ .
T Consensus       215 ~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~--~~~~~~~l~~~~~~~~~~~~  291 (393)
T PRK09705        215 GLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK--LLMLALVLQLVGFCGFIWLP  291 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH--HHHHHHHHHHHHHHHHHHcc
Confidence            67777888888999999976 7999999999999999999999999999999999877  444555555555443322 2


Q ss_pred             hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcc-ccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHH
Q psy17194        688 TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRY-VSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLI  765 (871)
Q Consensus       688 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~  765 (871)
                      .+...+.  .+..|++.+...+....   ...+..+ ++++|++.|+.+...++++.+||.+.|++.|+.| +...|.+.
T Consensus       292 ~~~~~~~--~~l~g~g~g~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~  366 (393)
T PRK09705        292 LQLPVLW--AMVCGLGLGGAFPLCLL---LALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFH  366 (393)
T ss_pred             chHHHHH--HHHHHHhccchHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHH
Confidence            2222222  22345555554443222   2233332 4678999999999999999999999999999987 66666666


Q ss_pred             HHHHHHHHHHHHHH
Q psy17194        766 AFMNILYAPVLIYL  779 (871)
Q Consensus       766 a~~~~~~~~~~~~~  779 (871)
                      +++.++...+.+.+
T Consensus       367 ~~~~~~~~~~~~~~  380 (393)
T PRK09705        367 ALCVVGLMIITLRF  380 (393)
T ss_pred             HHHHHHHHHHHHHh
Confidence            66666555444443

>TIGR00889 2A0110 nucleoside transporter

Probab=99.95  E-value=9.6e-26  Score=251.79  Aligned_cols=367  Identities=11%  Similarity=0.093  Sum_probs=260.3

Q ss_pred             HHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhh
Q psy17194         48 VSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      +++.+++.+...+...|.++.+..+ +|.                           +..|+|++.+++.++..++++++|
T Consensus         7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~---------------------------s~~~iGl~~a~~~~~~~i~~~~~g   59 (418)
T TIGR00889         7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHF---------------------------SGAEIGWVYSSTGIAAILMPILVG   59 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5566777788888887777777755 444                           899999999999999999999999


Q ss_pred             HhhhhhCC-chHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhccc-------CChhhHHHHHH
Q psy17194        127 ALIDRIGY-DLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRF-------TEENERSQALG  198 (871)
Q Consensus       127 ~l~Dr~Gr-r~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~-------~~~~~r~~~~g  198 (871)
                      +++||+|| |+++.++.++.+++..+..+.++++.+++.|++.|++.+...+...++..+..       .....|.|.+|
T Consensus        60 ~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G  139 (418)
T TIGR00889        60 IIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG  139 (418)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh
Confidence            99999965 77888888888888888889999999999999999988877776665532211       11123445555


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC--cccchhhhhcchhHH
Q psy17194        199 IALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH--STVPIWKLFMDPYIA  276 (871)
Q Consensus       199 ~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  276 (871)
                            .+|.++||.+++.+....+|+ +|++.+++.++..++ .+..||.+++.++++...+  ......+.+|+|.++
T Consensus       140 ------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  211 (418)
T TIGR00889       140 ------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMA  211 (418)
T ss_pred             ------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCee
Confidence                  478899999998874332344 566767666665544 4455554322111111000  011234678888887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        277 VCSGALLMANVALAFLEPTISLWIEDNLTTD--------NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      .+.+..++..........+.+.|+++ .|.+        ....+...+...+..+++.++.+++.||+|+|+.+  ..+.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l--~~~~  288 (418)
T TIGR00889       212 IFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVM--LLSL  288 (418)
T ss_pred             eHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHH
Confidence            77777777666665666777877765 4443        35668888888999999999999999999999965  5566


Q ss_pred             HHHHHHHHHhhcch----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFST----SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVA  423 (871)
Q Consensus       349 ~~~~~~~~~~~~~~----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~-~~~~lg~~igp~l~  423 (871)
                      ++.+++...+....    +.+.+++..++.+++.+...+..   ...+.+..|+++|++++|+.+ ....+|.++||.++
T Consensus       289 ~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~---~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~  365 (418)
T TIGR00889       289 VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG---SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS  365 (418)
T ss_pred             HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            66666554444422    23444556677777776653332   333455567799999999997 57889999999999


Q ss_pred             HHHHhhh------ChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        424 GGIVDAI------GFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       424 g~l~~~~------g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      |.+.|+.      ||+..|.+.+++.++.+++.++..+
T Consensus       366 G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~  403 (418)
T TIGR00889       366 GVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK  403 (418)
T ss_pred             HHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999984      5899999888877776665555443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.95  E-value=2.9e-25  Score=251.38  Aligned_cols=386  Identities=13%  Similarity=0.134  Sum_probs=279.6

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      .+.+..+.+..+...+.++.+.+.+|.+.++.+                        .++.+..+.|++.+.+.+++.++
T Consensus         9 p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~------------------------~lg~s~~~ag~~~~~~~~~~~~~   64 (475)
T TIGR00924         9 PKPLFTLFFVELWERFSYYGMQGILAVYLVQQA------------------------GLGFSQEQAFIIFGAYSALVYLL   64 (475)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------------CCCCCHHHHHHHHHHHHHHHHHH
Confidence            345567777888888888888899999987620                        12458999999999999999999


Q ss_pred             hhhhhHhhhh-hCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChh--hHHHHHH
Q psy17194        122 NPFSGALIDR-IGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEEN--ERSQALG  198 (871)
Q Consensus       122 ~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~--~r~~~~g  198 (871)
                      .+++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|++.|...+...++++|++++++  +|+++++
T Consensus        65 ~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~  144 (475)
T TIGR00924        65 TSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFT  144 (475)
T ss_pred             HhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceeh
Confidence            9999999999 899999999999999999999999999999999999999999999999999999985432  4888999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC---CCCCcc-c----------
Q psy17194        199 IALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK---PESHST-V----------  264 (871)
Q Consensus       199 ~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~---~~~~~~-~----------  264 (871)
                      +++.+.++|.++||++++++.+++||++.|++.++..++..+...+..+..++..++++   +++++. .          
T Consensus       145 ~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (475)
T TIGR00924       145 LFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALA  224 (475)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHH
Confidence            99999999999999999999998999999999886655543333332222111100000   000000 0          


Q ss_pred             -------------------------------------chhhhhcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q psy17194        265 -------------------------------------PIWKLFMD--PYIAVCSGALLMANVALAFLEPTISLWIEDNLT  305 (871)
Q Consensus       265 -------------------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  305 (871)
                                                           ...+.-|+  ..+..+++...+....+....+.++.+.++..+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~  304 (475)
T TIGR00924       225 LVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMH  304 (475)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcc
Confidence                                                 00000011  123334444445555666666777777776544


Q ss_pred             CCch----hHHHHHHhhHHhHHHHHHHHHH----HHhh-cCchhHHHHHHHHHHHHHHHHHhhc---------chhhHHH
Q psy17194        306 TDNW----KIGMIWLPAFFPHVFGVVITVK----LAKL-YPTYQWLMVAVGLVLEGLCCFIIPF---------STSYQML  367 (871)
Q Consensus       306 ~s~~----~~g~~~~~~~~~~~~~~~~~g~----l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l  367 (871)
                      .+..    ..+++.+...+..++.+++..+    +.+| .+.+...-+.+++++.+++.+..++         ..+.+++
T Consensus       305 ~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~  384 (475)
T TIGR00924       305 HEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFM  384 (475)
T ss_pred             ccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHH
Confidence            4322    2667888778877777776554    4444 2223322235677777776666543         3578888


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      +...++.++|.....+.......+.   .|++.||+++|++.....+|..+++.+.....+..+|.+.|...+++.++..
T Consensus       385 i~~~~~~~~ge~~~~p~~~~~~~~~---aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  461 (475)
T TIGR00924       385 VLIYLFQTLGELMISPLGLSWWTKI---APQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVG  461 (475)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHH
Confidence            8889999999999866666555444   4559999999999999999999999999888777788888888887776665


Q ss_pred             HHHHHHh
Q psy17194        448 PVLIYLK  454 (871)
Q Consensus       448 ~~~~~~~  454 (871)
                      ++.++..
T Consensus       462 ~~~~~~~  468 (475)
T TIGR00924       462 VVMALMV  468 (475)
T ss_pred             HHHHHHH
Confidence            5554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00899 2A0120 sugar efflux transporter

Probab=99.95  E-value=2e-25  Score=247.43  Aligned_cols=367  Identities=13%  Similarity=0.112  Sum_probs=252.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      +..++...+.....+.+|.|+++++|.|..+.|++.+.+.+...+.+++.|+++||+||||.++ ..+.....++.+++.
T Consensus         4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~-~~~~~~~~~~~~~~~   82 (375)
T TIGR00899         4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLI-LFCCLLAALACLLFA   82 (375)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHH-HHHHHHHHHHHHHHH
Confidence            4466677778888899999999899999999999999999999999999999999999888542 234444455566667


Q ss_pred             cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhH--HHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHH
Q psy17194        360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSI--YAIADISYSLAYAIGPIVAGGIVDAIGFTALNF  437 (871)
Q Consensus       360 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a--~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~  437 (871)
                      ++++++.+++.+++.+.+.+...+.......+   ..+++.|+.+  .+.......+|..++|.+++.+.+..||++.|+
T Consensus        83 ~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~  159 (375)
T TIGR00899        83 WNRNYFLLLVLGVLLSSFASTANPQLFALARE---HADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFL  159 (375)
T ss_pred             hcchHHHHHHHHHHHHhhhhhhHHHHHHHHHH---HhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHH
Confidence            77888877776666665555443332222222   2233455543  677788889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccC
Q psy17194        438 LIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVG  517 (871)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (871)
                      +.+++.++..++.++..++.++.+            ++          .++         +.                  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~----------~~~---------~~------------------  190 (375)
T TIGR00899       160 TAALAFVLCGVLVWLFLPSYPRGA------------PG----------ALT---------RL------------------  190 (375)
T ss_pred             HHHHHHHHHHHHHHHhCCCcccCc------------cc----------ccC---------cc------------------
Confidence            988876665554443222100000            00          000         00                  


Q ss_pred             cCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhcc
Q psy17194        518 TNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  597 (871)
Q Consensus       518 ~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  597 (871)
                                                                                               +.++.++
T Consensus       191 -------------------------------------------------------------------------~~~~~~~  197 (375)
T TIGR00899       191 -------------------------------------------------------------------------EVRGLLA  197 (375)
T ss_pred             -------------------------------------------------------------------------hhhhhhc
Confidence                                                                                     0012334


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH
Q psy17194        598 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  677 (871)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~  677 (871)
                      +|+++......++.+.........+|.|+++.+|.++.+.|++.....+..+++.++.|++.||+++|+  ....+..+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~--~~~~~~~~~  275 (375)
T TIGR00899       198 SRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR--LMLLAALAG  275 (375)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh--HHHHHHHHH
Confidence            444444444444444444555667899998899999999999888777777888899999999999888  444454444


Q ss_pred             hhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC
Q psy17194        678 GLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  757 (871)
Q Consensus       678 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g  757 (871)
                      .+.+..+...++.+.+....+..+++.+...+.......   +.. +++++++.|+++...++|..+||.+.|.+.+..|
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g  351 (375)
T TIGR00899       276 VAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQ---DLM-PGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS  351 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            444444444455555545555556655654443333322   333 4567899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHH
Q psy17194        758 FTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       758 ~~~~~~~~a~~~~~~~~~~~~  778 (871)
                      ++..+.+.+++.+++....++
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~  372 (375)
T TIGR00899       352 YHAVYWFAIVMLIVALFCLLL  372 (375)
T ss_pred             chhHHHHHHHHHHHHHHHHhe
Confidence            999999988887777665543

This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.

>TIGR00897 2A0118 polyol permease family

Probab=99.95  E-value=1.9e-25  Score=249.24  Aligned_cols=378  Identities=13%  Similarity=0.108  Sum_probs=261.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.+....+..++..........+.+.+++ ++|.++.+.+++.+.+.++..++.++.|++.||+||||.+  ..+..+.+
T Consensus        13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l--~~~~~~~~   89 (402)
T TIGR00897        13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLK-ALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTM--MIGLLLWC   89 (402)
T ss_pred             chhhHHHHHHHHHHHhhhhHHHhHHHHHH-HhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--HHHHHHHH
Confidence            44555566666666676667778888775 5799999999999999999999999999999999999965  55555555


Q ss_pred             HHHHHh---hc-chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHH-HHHHHHHHHHH
Q psy17194        353 LCCFII---PF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAY-AIGPIVAGGIV  427 (871)
Q Consensus       353 ~~~~~~---~~-~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~-~igp~l~g~l~  427 (871)
                      ++.+.+   .. ..+.+.+++.+++.|++.+...+   .......+..++++|++++|+.+....+|. .++|.+++.+.
T Consensus        90 ~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~  166 (402)
T TIGR00897        90 VGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAY---SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAI  166 (402)
T ss_pred             HHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHh---HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            554433   23 24667777778888887765422   223334455567999999999999999996 58999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      +..||+..++......++..++..+..+.++    +++         ++ .      + +++   .+   +         
T Consensus       167 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------~~-~------~-~~~---~~---~---------  210 (402)
T TIGR00897       167 PAFGEMNTLWSALAFVLTGGVIALFSNKDIF----TPQ---------HM-Q------T-REK---FS---E---------  210 (402)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhccCCCC----Ccc---------cc-c------C-Ccc---hh---h---------
Confidence            9889776665544333333322222221100    000         00 0      0 000   00   0         


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (402)
T TIGR00897       211 --------------------------------------------------------------------------------  210 (402)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      ....++.++++|+++...+..++.....+++.+++|.|+++ +|++..+.+.+.....++..++++..|+++||+++|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~  289 (402)
T TIGR00897       211 LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT  289 (402)
T ss_pred             HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH
Confidence            00013567889999888888888888888889999999855 89999999999999999999999999999999998774


Q ss_pred             HHHHHHHHHHhhH---Hhhhc--chhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHH
Q psy17194        668 LMVAVGLVLEGLC---CFIIP--FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAY  742 (871)
Q Consensus       668 ~~~~~g~~~~~~~---l~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~  742 (871)
                      .. ..+....+++   +...+  ..++.+...+..+..|++.+... +.....    ++.+++++|++.|++|+..++|+
T Consensus       290 ~~-~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~-~~~~~~----~~~~~~~~g~~~g~~~~~~~lg~  363 (402)
T TIGR00897       290 VR-WFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYV-PLAAVF----PTLAPKHKGAAMSVLNLSAGLSA  363 (402)
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHH-HHHHHH----HhhCcchhHHHHHHHHHHHHHHH
Confidence            22 2222222222   21111  12334444555566666555432 222222    22336789999999999999999


Q ss_pred             hHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        743 AIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       743 ~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      .+||.+.|.+.|..|+...+++.+++.+++.....++
T Consensus       364 ~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~  400 (402)
T TIGR00897       364 FLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI  400 (402)
T ss_pred             HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999998888877665554

This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.

>TIGR00712 glpT glycerol-3-phosphate transporter

Probab=99.95  E-value=8.7e-26  Score=254.89  Aligned_cols=373  Identities=11%  Similarity=0.026  Sum_probs=244.7

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc----hhhHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----TSYQMLMLPICG  373 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~l  373 (871)
                      .++++ +|.++.+.++..+.+.++..++.++.|+++||+|+|+.+  ..+..+.+++.+.+...    .+.+.+++.+++
T Consensus        51 p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  127 (438)
T TIGR00712        51 PYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL  127 (438)
T ss_pred             HHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceeh--HHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence            34565 599999999999999999999999999999999999854  55666666666655443    345566677778


Q ss_pred             HHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhChhhHHHHHHHHHHHHHHHHHH
Q psy17194        374 ICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-AIGFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       374 ~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~-~~g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      .+++.+...+...   ..+.+.+|+++|++++++.+....+|..++|.+.+.+.+ ..||++.|++.+++.++..++.++
T Consensus       128 ~g~~~g~~~~~~~---~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~  204 (438)
T TIGR00712       128 NGWFQGMGWPPCG---RTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFA  204 (438)
T ss_pred             HHHHhhcchHHHH---HHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            8888776643333   334455667899999999999999999999988876554 568999999988877665544443


Q ss_pred             HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccc
Q psy17194        453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPST  532 (871)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (871)
                      ..+..++....       ++.++  .+.   + . ..        +..      ++++       .+             
T Consensus       205 ~~~~~~~~~~~-------~~~~~--~~~---~-~-~~--------~~~------~~~~-------~~-------------  236 (438)
T TIGR00712       205 MMRDTPQSCGL-------PPIEE--YRN---D-Y-PD--------DYN------EKAE-------QE-------------  236 (438)
T ss_pred             hccCCHHhcCC-------CCchh--ccc---c-c-cc--------ccc------cccc-------cc-------------
Confidence            33211100000       00000  000   0 0 00        000      0000       00             


Q ss_pred             cCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc-hhhhccchhHHHHHHHHHHH
Q psy17194        533 GPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP-IWKLFMDPYIAVCSGALLMA  611 (871)
Q Consensus       533 g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~  611 (871)
                                                                           .+.+.. ...++++|.++...+..++.
T Consensus       237 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (438)
T TIGR00712       237 -----------------------------------------------------LTAKEIFMQYVLPNKLLWYIAIANVFV  263 (438)
T ss_pred             -----------------------------------------------------cchHHHHHHHHccCchHHHHHHHHHHH
Confidence                                                                 000000 13478899999888888888


Q ss_pred             HHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHH-HHhhHHh--hhcchh
Q psy17194        612 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV-LEGLCCF--IIPFST  688 (871)
Q Consensus       612 ~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~-~~~~~l~--~~~~~~  688 (871)
                      +...+++..++|.|+++.+|+|+.++|+++.+..++.+++.++.|++.||++++|......... ...++.+  ++....
T Consensus       264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (438)
T TIGR00712       264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAG  343 (438)
T ss_pred             HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCC
Confidence            8888888999999999989999999999999999999999999999999996543212111111 1111111  121122


Q ss_pred             hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHH-hHhhhhHHHhHhhhChHHHHHHHHH
Q psy17194        689 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAY-AIGPIVAGGIVDAIGFTALNFLIAF  767 (871)
Q Consensus       689 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~-~~gp~~~g~l~~~~g~~~~~~~~a~  767 (871)
                      +.+.....++.+|++....   .........+..+++.+|+++|+++..+++|+ ++||.+.|.+.|+.||..++.+.++
T Consensus       344 ~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~  420 (438)
T TIGR00712       344 NPLVDMICMIVIGFLIYGP---VMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIG  420 (438)
T ss_pred             chHHHHHHHHHHHHHHccH---HHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHH
Confidence            3333333333444332211   11111223355557889999999999998875 6899999999999999999988888


Q ss_pred             HHHHHHHHHHHHh
Q psy17194        768 MNILYAPVLIYLK  780 (871)
Q Consensus       768 ~~~~~~~~~~~~~  780 (871)
                      +.+++.+..+.+.
T Consensus       421 ~~~~~~~~~~~~~  433 (438)
T TIGR00712       421 GSILAVILLIVVM  433 (438)
T ss_pred             HHHHHHHHHHHHH
Confidence            7777665555443

This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.

>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily

Probab=99.95  E-value=7e-26  Score=260.36  Aligned_cols=402  Identities=15%  Similarity=0.132  Sum_probs=275.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ..+....++............|.+ .+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+..++.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~   81 (485)
T TIGR00711         5 IVLMLGTFMAVLDSTIVNVAIPTI-AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLF--LISTFAFTLGS   81 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHH--HHHHHHHHHHH
Confidence            344445555555556666666664 566899999999999999999999999999999999999955  77788888888


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      +++...++.+.+++.+++.|++.+...+...+.   +.+..|+++|+++.++......+|..++|.++|++.++.||++.
T Consensus        82 ~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~---i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~  158 (485)
T TIGR00711        82 LLCGVAPNLELMIIFRVIQGFGGGPLIPLSFST---LLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWI  158 (485)
T ss_pred             HHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceeh
Confidence            888889999999999999999988875444444   44445669999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccc-cccccccccccccCCCcCccc
Q psy17194        436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDY-KNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      |++.+.+.++..++.++..+.+++++.        ++     .+     ......... .........+           
T Consensus       159 f~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~d-----~~g~~l~~~~~~~~~~~~~~-----------  209 (485)
T TIGR00711       159 FLINVPIGIIVVVVAFFILPRDKPAAS--------EN-----FD-----FLGLLLLSVGLGSLLYGLSE-----------  209 (485)
T ss_pred             hhhhhHHHHHHHHHHHHHcCCcccccc--------CC-----Cc-----HHHHHHHHHHHHHHHHHHhh-----------
Confidence            999887766655544433221110000        00     00     000000000 0000000000           


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  594 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  594 (871)
                                                    .+..+|...-...............+..++.    +.+++..+     .+
T Consensus       210 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-----~~  250 (485)
T TIGR00711       210 ------------------------------GPERGWFDSNEILILSITGLVAIIAFVVWEL----TDDNPLVD-----LR  250 (485)
T ss_pred             ------------------------------CCCCCCCCchHHHHHHHHHHHHHHHHHHHHH----cCCCCccC-----HH
Confidence                                          0000111010000101111111111211111    11112111     57


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHH
Q psy17194        595 LFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  674 (871)
Q Consensus       595 l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~  674 (871)
                      ++++|+++...+..++.+..++....++|.|+++.+|+++.++|+.+.+..++.++++++.|++.||+++|+  ...++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~~~~g~  328 (485)
T TIGR00711       251 LFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRK--LVTIGL  328 (485)
T ss_pred             HHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHH--HHHHHH
Confidence            899999999888888888888988999999999999999999999999999999999999999999999877  556666


Q ss_pred             HHHhhHHhhhcc----hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        675 VLEGLCCFIIPF----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       675 ~~~~~~l~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      .+.+++++++.+    ..+.+.+....+..|++.+...++......   +..+++++|+++|++|+.+++|+.+|+.+.|
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g  405 (485)
T TIGR00711       329 ILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIAL---SGLPPHKIARGSSLSNFTRQLGGSIGTALIT  405 (485)
T ss_pred             HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            666666665542    233444555667777877776554444333   4445889999999999999999999999999


Q ss_pred             HhHhhh
Q psy17194        751 GIVDAI  756 (871)
Q Consensus       751 ~l~~~~  756 (871)
                      .+.++.
T Consensus       406 ~~~~~~  411 (485)
T TIGR00711       406 TILTNR  411 (485)
T ss_pred             HHHHHH
Confidence            988753

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.

>PRK05122 major facilitator superfamily transporter; Provisional

Probab=99.95  E-value=2.9e-25  Score=248.16  Aligned_cols=369  Identities=15%  Similarity=0.118  Sum_probs=257.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      ++++..+++..++.........+.+|.++++++|.|..+.|++.+.+.++..+++++.|+++||+|||+.+  ..+.++.
T Consensus        14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l--~~~~~~~   91 (399)
T PRK05122         14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV--VFGLCGC   91 (399)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH--HHHHHHH
Confidence            45667777788888888888899999999999999999999999999999999999999999999999965  5555544


Q ss_pred             HHHHHHhh---cch-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        352 GLCCFIIP---FST-----SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       352 ~~~~~~~~---~~~-----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      +++.+.+.   +.+     +.+.+++.+++.|++.+...+.....   ..+..++++|++++++......+|..++|.++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~  168 (399)
T PRK05122         92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILW---GIGRVGALHTGRVISWNGIATYGALAIGAPLG  168 (399)
T ss_pred             HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHH---HHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence            44433322   222     45567788889999988764443333   33445669999999999999999999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      +.+.+..||++.+++..++.++..   ++.++..+ .+            ++   +    +   ++ .            
T Consensus       169 ~~l~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~-~~------------~~---~----~---~~-~------------  209 (399)
T PRK05122        169 VLLYHWGGLAGLGLLIMLLALLGL---LLARPRPA-VP------------PV---K----G---ER-L------------  209 (399)
T ss_pred             HHHHHcccHHHHHHHHHHHHHHHH---HHHhcCCC-CC------------CC---C----c---cc-h------------
Confidence            999999999998876555433222   12111000 00            00   0    0   00 0            


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       210 --------------------------------------------------------------------------------  209 (399)
T PRK05122        210 --------------------------------------------------------------------------------  209 (399)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  663 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~  663 (871)
                             ++.+.+++  ++.......+....++....++|.|+++ .|+  .+.++.+....++.+++.++.|++.||++
T Consensus       210 -------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~  277 (399)
T PRK05122        210 -------PFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLG  277 (399)
T ss_pred             -------hHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                   00001110  0111111222333445556678888754 465  34567777888889999999999999999


Q ss_pred             chhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHh
Q psy17194        664 TYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA  743 (871)
Q Consensus       664 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~  743 (871)
                      +||  ....+..+.+++++.+...++.+.+++..+..|++.+...+....   ...+..+++++|+++|+++...++|..
T Consensus       278 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~---~~~~~~~~~~~g~~~g~~~~~~~~g~~  352 (399)
T PRK05122        278 GLR--VAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGV---EAVKRVPPQNRGAALGAYSVFLDLSLG  352 (399)
T ss_pred             cHH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            877  555666666666665555555555556667777777765443333   233444578899999999999999999


Q ss_pred             HhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17194        744 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  781 (871)
Q Consensus       744 ~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~~  781 (871)
                      ++|.+.|.+.++.||++.+.+.+++.+++....+++++
T Consensus       353 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  390 (399)
T PRK05122        353 ITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR  390 (399)
T ss_pred             HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999988888877665555443

>PRK11646 multidrug resistance protein MdtH; Provisional

Probab=99.95  E-value=3.8e-25  Score=246.00  Aligned_cols=365  Identities=13%  Similarity=0.104  Sum_probs=260.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      +.+....++...+.....++++.|+++++|+|..+.|+..+...+...+..++.|+++||+|+|+.+  ..+..+.+++.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l--~~~~~~~~~~~   90 (400)
T PRK11646         13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMI--VTGMLMRAAGF   90 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHH--HHHHHHHHHHH
Confidence            4455677777888888899999999999999999999999999999999999999999999999955  77777788888


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      +.+...++.+.+++.+++.+++.+...+...+..   .+..|+++|++++|+.+....+|..+||.++|.+. ..||++.
T Consensus        91 ~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~  166 (400)
T PRK11646         91 ATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALV---IKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLV  166 (400)
T ss_pred             HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHH
Confidence            8888888888888888888988876644444443   34456689999999999999999999999999998 6799999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccc
Q psy17194        436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAAN  515 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (871)
                      |++.++..++..++..+..+.   .+   +      +              +.. +      +.                
T Consensus       167 f~~~~~~~~~~~i~~~~~~~~---~~---~------~--------------~~~-~------~~----------------  197 (400)
T PRK11646        167 CATGAVLFVLAAAFNAWLLPA---YK---L------S--------------TVR-T------PV----------------  197 (400)
T ss_pred             HHHHHHHHHHHHHHHHHhCCc---cc---c------c--------------ccc-h------hh----------------
Confidence            998877666554433222110   00   0      0              000 0      00                


Q ss_pred             cCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhh
Q psy17194        516 VGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKL  595 (871)
Q Consensus       516 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  595 (871)
                                                                                               +.+++++
T Consensus       198 -------------------------------------------------------------------------~~~~~~~  204 (400)
T PRK11646        198 -------------------------------------------------------------------------REGMTRV  204 (400)
T ss_pred             -------------------------------------------------------------------------HHHHHHH
Confidence                                                                                     0013456


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhc-cCchhhHHHHHHH
Q psy17194        596 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-YPTYQWLMVAVGL  674 (871)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~-~~~~~~~~~~~g~  674 (871)
                      +++|+++...+..+..+........++|.|+++..+ ++.+.|+++...+++...+....+++.|| ++.++  ....+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~  281 (400)
T PRK11646        205 LRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH--RLMAGL  281 (400)
T ss_pred             HcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH--HHHHHH
Confidence            778877665544444444444455678999977655 77889999888877776666666677665 45444  345666


Q ss_pred             HHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHh
Q psy17194        675 VLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  754 (871)
Q Consensus       675 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~  754 (871)
                      .+.+++++.++..++.+.+++..+.++++.+...+...+...+.++   ++++|+++|++++.+++|+.+||.+.|.+.|
T Consensus       282 ~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p---~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~  358 (400)
T PRK11646        282 LIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLAD---ARARGSYMGFSRLGLALGGAIGYIGGGWLFD  358 (400)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCC---cccchhhhhHHHHHHHHHHHhcccchHHHHH
Confidence            6666666666655555555555556666666555554444554444   8899999999999999999999999999999


Q ss_pred             hhC----hHHHHHHHHHHHHHHHH
Q psy17194        755 AIG----FTALNFLIAFMNILYAP  774 (871)
Q Consensus       755 ~~g----~~~~~~~~a~~~~~~~~  774 (871)
                      +.+    ....+.+.+++.++...
T Consensus       359 ~~~~~~~~~~~~~~~~~~~~~~~~  382 (400)
T PRK11646        359 LGKALNQPELPWMMLGIIGLITLL  382 (400)
T ss_pred             HHhhcCCcchHHHHHHHHHHHHHH
Confidence            753    23444444444444443

>PRK03699 putative transporter; Provisional

Probab=99.95  E-value=3.8e-25  Score=246.31  Aligned_cols=370  Identities=12%  Similarity=0.057  Sum_probs=259.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      .+......++...........+|. +.+++|+|..+.+++.+...++..++.++.|++.||+|+|+.+  ..+..+..++
T Consensus         9 ~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~--~~~~~~~~i~   85 (394)
T PRK03699          9 TWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL--IFGFALMILA   85 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHHHHHHHHH
Confidence            334444444444444555556666 5567899999999999999999999999999999999999955  6677777788


Q ss_pred             HHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhChh
Q psy17194        355 CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-AIGFT  433 (871)
Q Consensus       355 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~-~~g~~  433 (871)
                      .++..+.++.+.+++.+++.|++.+...+.....   +.+.+|+++|+++.+..+....+|+.++|.+.+.+.+ ..|||
T Consensus        86 ~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~---i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~  162 (394)
T PRK03699         86 VAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFL---ITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWY  162 (394)
T ss_pred             HHHHHHcchHHHHHHHHHHHHHhhHhhccchhHH---hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHH
Confidence            8888888888888888999999888764443333   3444556889999999988889999999999998765 57999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPA  513 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (871)
                      +.|.+.+++.++..++.++ .+.++     .+         ++ .+    +   +  +      +.              
T Consensus       163 ~~f~~~~~~~~~~~~~~~~-~~~p~-----~~---------~~-~~----~---~--~------~~--------------  197 (394)
T PRK03699        163 WVYACIGLVYVAIFILTLF-SEFPA-----LG---------KH-AP----K---A--D------KP--------------  197 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCcc-----cc---------cc-Cc----c---c--c------Cc--------------
Confidence            9999887766555443322 11000     00         00 00    0   0  0      00              


Q ss_pred             cccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh
Q psy17194        514 ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW  593 (871)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  593 (871)
                                                                                             ..      +
T Consensus       198 -----------------------------------------------------------------------~~------~  200 (394)
T PRK03699        198 -----------------------------------------------------------------------VA------K  200 (394)
T ss_pred             -----------------------------------------------------------------------cc------c
Confidence                                                                                   00      0


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHH
Q psy17194        594 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  673 (871)
Q Consensus       594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g  673 (871)
                       ...++.++...+..++.....+.+..++|.|+++.+|+|+.+.|.+.+...++.+++.++.|++.||+++|+.  ....
T Consensus       201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~--l~~~  277 (394)
T PRK03699        201 -EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRI--LTVL  277 (394)
T ss_pred             -ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhH--HHHH
Confidence             0012444555555566666677788899999999999999999999999999999999999999999998874  3344


Q ss_pred             HHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        674 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       674 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      ..+.++.++++...++.+.+.+..+..|++.+...+....   ...+.. ++.++...|..+...++|+.+||.+.|++.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~---~~~~~~-~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~  353 (394)
T PRK03699        278 AGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIIT---LGSQQT-KVASPKLVNFILTCGTIGTMLTFVVTSPIV  353 (394)
T ss_pred             HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHc-cCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence            4444444444444444444444555666655544433222   222222 445577888999999999999999999999


Q ss_pred             hhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        754 DAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       754 ~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      |..|++.++++.+++.+++....+..
T Consensus       354 ~~~g~~~~~~~~~~~~~~~~~~~~~~  379 (394)
T PRK03699        354 AHFGLQAALLTANGLYAVVFVMCILL  379 (394)
T ss_pred             HHhCchhhhhhhHHHHHHHHHHHHHH
Confidence            99999999998888877776444444

>KOG2504|consensus

Probab=99.95  E-value=7.9e-26  Score=253.05  Aligned_cols=363  Identities=19%  Similarity=0.217  Sum_probs=307.9

Q ss_pred             hhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHH
Q psy17194         59 YMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPM  138 (871)
Q Consensus        59 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l  138 (871)
                      ......+.+.+.++++.                           +..+++|+.++..-...+..|+.+.+.||+|.|.+.
T Consensus        62 ~~~~Gv~~~~~~~~f~~---------------------------s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~  114 (509)
T KOG2504|consen   62 INSFGLLFEELMDYFGS---------------------------SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVM  114 (509)
T ss_pred             hheehhhHHHHHHHhCC---------------------------CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHH
Confidence            33445667888888765                           778899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy17194        139 MIGLCIMFLSTALFACGRSYGVLFFAR-SLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGA  217 (871)
Q Consensus       139 ~~~~~~~~i~~~l~~~a~s~~~l~~~r-~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~  217 (871)
                      ++|.++.+++.++..+++++|++++.. ++.|+|.|+.+.....++..+|  +++|+.+.|+...+.++|..+-|.+..+
T Consensus       115 i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF--~kkR~lA~Gia~~GsG~G~~~~~~l~~~  192 (509)
T KOG2504|consen  115 IAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF--EKKRALATGIAVSGTGVGTVVFPPLLKY  192 (509)
T ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh--HHHHHHHHhhhhccCCcceeeHHHHHHH
Confidence            999999999999999999999998855 8999999999999999999987  4799999999999999999999999999


Q ss_pred             HHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhh------------------------hc---c--CCC----------
Q psy17194        218 LYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ------------------------LN---Q--KKP----------  258 (871)
Q Consensus       218 l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~------------------------~~---~--~~~----------  258 (871)
                      +.+.+|||+.+++.+.+.+-.++......|..++.                        ..   .  ..+          
T Consensus       193 l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (509)
T KOG2504|consen  193 LLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLK  272 (509)
T ss_pred             HHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhh
Confidence            99999999999999999887777777766621111                        00   0  000          


Q ss_pred             --CC-----Cccc-c---hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHH
Q psy17194        259 --ES-----HSTV-P---IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVV  327 (871)
Q Consensus       259 --~~-----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~  327 (871)
                        ++     .... .   ..++++++.++.+.....+..+++.....++|.|.. ..+.+..+++.+.++.++..+++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi  351 (509)
T KOG2504|consen  273 RGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRI  351 (509)
T ss_pred             hCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhh
Confidence              00     0001 1   257889999999999999999999999999999887 5799999999999999999999999


Q ss_pred             HHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH
Q psy17194        328 ITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI  407 (871)
Q Consensus       328 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi  407 (871)
                      +.|+++|+...++..+..++++..++..+.+++.++++.++...+++|+..+...........++.+.   ++-..+.|+
T Consensus       352 ~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~---~~l~~a~Gl  428 (509)
T KOG2504|consen  352 ILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGL---EKLSNAYGL  428 (509)
T ss_pred             hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh---hhcchHHHH
Confidence            99999999986666666788888888888899999999999988999999888755554455555554   888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        408 ADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       408 ~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                      ......++..+||++.|.+.|..| |...|+..++..+++..+++..+
T Consensus       429 ~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~  476 (509)
T KOG2504|consen  429 LLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR  476 (509)
T ss_pred             HHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence            999999999999999999999998 99999999999888887777666

>PRK10213 nepI ribonucleoside transporter; Reviewed

Probab=99.95  E-value=1.8e-24  Score=240.20  Aligned_cols=347  Identities=14%  Similarity=0.075  Sum_probs=253.7

Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP  370 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  370 (871)
                      .....+|. +.+++|+++.+.++..+...++..+++++.|++.||+|||+.+  ..+..+.+++.+++.+.++.+.+++.
T Consensus        38 ~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~  114 (394)
T PRK10213         38 LPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVV--ILFAVLLTLSCLLVSFANSFSLLLIG  114 (394)
T ss_pred             HHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHH--HHHHHHHHHHHHHHHHHChHHHHHHH
Confidence            44445666 4567899999999999999999999999999999999999955  77777778888888888899999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVL  450 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~  450 (871)
                      +++.|++.+...+.......+   .+|+++|+++.++.....++|..++|.+++.+.+.+||++.|++.+++.++..+..
T Consensus       115 r~l~G~~~g~~~~~~~~~i~~---~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~  191 (394)
T PRK10213        115 RACLGLALGGFWAMSASLTMR---LVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWI  191 (394)
T ss_pred             HHHHHHhhHHHHHHHHHHHHH---HcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence            999999999875555555444   44568999999999999999999999999999999999999998876555433222


Q ss_pred             HHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccc
Q psy17194        451 IYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAP  530 (871)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (871)
                      ....+  + ++             ++         .++         .                                
T Consensus       192 ~~~~p--~-~~-------------~~---------~~~---------~--------------------------------  205 (394)
T PRK10213        192 IKSLP--S-LP-------------GE---------PSH---------Q--------------------------------  205 (394)
T ss_pred             HHHCC--C-CC-------------cc---------ccc---------c--------------------------------
Confidence            11110  0 00             00         000         0                                


Q ss_pred             cccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHH
Q psy17194        531 STGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLM  610 (871)
Q Consensus       531 ~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  610 (871)
                                                                                ..+.++++++|.++...+..++
T Consensus       206 ----------------------------------------------------------~~~~~~~l~~~~~~~~~~~~~~  227 (394)
T PRK10213        206 ----------------------------------------------------------KQNTFRLLQRPGVMAGMIAIFM  227 (394)
T ss_pred             ----------------------------------------------------------hhHHHHHhcCHHHHHHHHHHHH
Confidence                                                                      0012457788888887766666


Q ss_pred             HHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhh
Q psy17194        611 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY  690 (871)
Q Consensus       611 ~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~  690 (871)
                      .+...+....+++.++.+.+|+++.+.|+++...+++.+++.++.+++.||.++ +. .........+..+++....++.
T Consensus       228 ~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~-l~~~~~~~~~~~~~l~~~~~~~  305 (394)
T PRK10213        228 SFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LA-LAGAPLVLAVSALVLTLWGSDK  305 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hH-HHHHHHHHHHHHHHHHHHhhhH
Confidence            666666666676444456789999999999999999999999999999999543 32 2222233233333333344455


Q ss_pred             HHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHH
Q psy17194        691 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNI  770 (871)
Q Consensus       691 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~  770 (871)
                      +.+....++.|++.+...+...+.++..+    +++.+.+.+......++|..+||.++|.+.|+.|++..+...+.+.+
T Consensus       306 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~  381 (394)
T PRK10213        306 IVATGVAIIWGLTFALVPVGWSTWITRSL----ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML  381 (394)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHC----cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence            55556667777777766555444444443    34567778888889999999999999999999999988887776555


Q ss_pred             HHH
Q psy17194        771 LYA  773 (871)
Q Consensus       771 ~~~  773 (871)
                      +..
T Consensus       382 ~~~  384 (394)
T PRK10213        382 LTA  384 (394)
T ss_pred             HHH
Confidence            544

>PRK09874 drug efflux system protein MdtG; Provisional

Probab=99.95  E-value=5.4e-25  Score=246.98  Aligned_cols=374  Identities=14%  Similarity=0.135  Sum_probs=260.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchh-----HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK-----IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~-----~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      +.+.......++.........+++|.+.++ +|.+..+     .+++.+...++..++.++.|+++||+|||+.+  ..+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~   90 (408)
T PRK09874         14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML--LRS   90 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH--HHH
Confidence            344455566667777777888889988765 7877554     47888888999999999999999999999865  566


Q ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      ..+.+++.+++...++.+.+++.+++.+++.+.. +.   ....+.+..++++|++++++.+....+|..++|.+++.+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~  166 (408)
T PRK09874         91 ALGMGIVMVLMGLAQNIWQFLILRALLGLLGGFV-PN---ANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA  166 (408)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhH-Hh---HHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6666777777777788888888888888765532 22   2233445566789999999999999999999999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      +..||++.|++.+++.++..+..++..+.+.+..             ++          ++ ..      +.        
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~----------~~-~~------~~--------  208 (408)
T PRK09874        167 DSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV-------------SK----------KE-ML------HM--------  208 (408)
T ss_pred             HHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc-------------cc----------hh-hh------HH--------
Confidence            9999999999988776665554443332110000             00          00 00      00        


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                      
T Consensus       209 --------------------------------------------------------------------------------  208 (408)
T PRK09874        209 --------------------------------------------------------------------------------  208 (408)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccchhhhccchhHHHHH-HHHHHHHHHHHHhhhcHHHHHHHhcCCCc---cchhhhhhccchhhhhhhhhhhhhhhccC
Q psy17194        588 STVPIWKLFMDPYIAVCS-GALLMANVALAFLEPTISLWIEDNLTTDN---WKIGMIWLPAFFPHVFGVVITVKLAKLYP  663 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~lp~~l~~~~g~s~---~~~gl~~~~~~~~~~i~~~~~g~l~d~~~  663 (871)
                        ....+.+++|+++... ...++.......+...+|.|+++..+...   ...|++....+++.+++.+..|++.||++
T Consensus       209 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g  286 (408)
T PRK09874        209 --REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIG  286 (408)
T ss_pred             --HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence              0012334555544322 22333344444566778888876533222   13456666778888899999999999999


Q ss_pred             chhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHh
Q psy17194        664 TYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA  743 (871)
Q Consensus       664 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~  743 (871)
                      +|+  ....+..+.+++++.+.+..+.+.+.+..+..|++.+...+...+...+..   +++++|+++|+++.++.+|..
T Consensus       287 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~g~~  361 (408)
T PRK09874        287 PEK--ILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS---SNQIAGRIFSYNQSFRDIGNV  361 (408)
T ss_pred             cch--hHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC---CcccceeeehHHHHHHHHHHH
Confidence            888  444555555555555544455555556666777777766555444444333   478899999999999999999


Q ss_pred             HhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHH
Q psy17194        744 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       744 ~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~  778 (871)
                      +||.++|.+.+..||+..|.+.+++.++++...++
T Consensus       362 ~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~  396 (408)
T PRK09874        362 TGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN  396 (408)
T ss_pred             hhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999888887755544

>PRK10054 putative transporter; Provisional

Probab=99.95  E-value=7.8e-25  Score=243.10  Aligned_cols=367  Identities=11%  Similarity=0.070  Sum_probs=264.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.++.+.+..++...+.....++++.|+++++|++..++|+..+.+.++.++++++.|+++||+|+|+.+  ..+..+..
T Consensus         7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~--~~~~~~~~   84 (395)
T PRK10054          7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYM--LLAITAFA   84 (395)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhH--HHHHHHHH
Confidence            4466667778888888888999999999999999999999999999999999999999999999999855  56666777


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        353 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       353 ~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ++.+.+.+.++.+.+++.+.+.+.+.+...+...   +...+..++++|++++++.+...++|.+++|.+++.+.+ .||
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~  160 (395)
T PRK10054         85 SGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLK---AWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSI  160 (395)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc
Confidence            7777777888887776666666655554422222   233445566899999999999999999999999999875 799


Q ss_pred             hhHHHHHHHHHHHHHHHHHH-HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcC
Q psy17194        433 TALNFLIAFMNILYAPVLIY-LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQ  511 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (871)
                      +..|++.+++.++.+++..+ .++.++++               +       ++  + +.      ..            
T Consensus       161 ~~~f~~~~~~~~i~~i~~~~~~~~~~~~~---------------~-------~~--~-~~------~~------------  197 (395)
T PRK10054        161 NLPFWLAAICSAFPLVFIQIWVQRSEKAI---------------A-------TE--T-GS------VW------------  197 (395)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcccccc---------------c-------cc--h-hh------hh------------
Confidence            99999887776665444333 22210000               0       00  0 00      00            


Q ss_pred             cccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc
Q psy17194        512 PAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP  591 (871)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  591 (871)
                                                                                                     .
T Consensus       198 -------------------------------------------------------------------------------~  198 (395)
T PRK10054        198 -------------------------------------------------------------------------------S  198 (395)
T ss_pred             -------------------------------------------------------------------------------h
Confidence                                                                                           0


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHh--cCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLM  669 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~  669 (871)
                      .++++|+|+++...+..++..+....+..+++.|+...  .+.+....|.++...++..+...+..|++.||.++|+  .
T Consensus       199 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~  276 (395)
T PRK10054        199 PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP--L  276 (395)
T ss_pred             hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh--H
Confidence            13467888888777777776666666666778777543  4566677788888888888888888899999998877  5


Q ss_pred             HHHHHHHHhhHHhhhcch-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        670 VAVGLVLEGLCCFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       670 ~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      +..++.+.++++..+... ++.+.+.+..+.+++|.+...+..........+   ++.+|++.|.++ ...+|.++||.+
T Consensus       277 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p---~~~~~~~~~~~~-~~~~G~~~Gp~~  352 (395)
T PRK10054        277 MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAP---PGMKASYFSAQS-LGWLGAAINPLV  352 (395)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC---cccceehHhHHH-HHHHHHHHHHHH
Confidence            556666666666555443 445555566677777766554443333444333   778899988766 577999999999


Q ss_pred             HHHhHhhhChHHHHHHHHHHHHHHH
Q psy17194        749 AGGIVDAIGFTALNFLIAFMNILYA  773 (871)
Q Consensus       749 ~g~l~~~~g~~~~~~~~a~~~~~~~  773 (871)
                      +|.++|+.|+...|.+.+.+..++.
T Consensus       353 ~G~l~~~~g~~~~~~~~~~~~~~~~  377 (395)
T PRK10054        353 SGVILTTLPPWSLFVILALAIVAAW  377 (395)
T ss_pred             HHHHHHHcChhhHHHHHHHHHHHHH
Confidence            9999999999988877665554443

>TIGR00900 2A0121 H+ Antiporter protein

Probab=99.95  E-value=1.5e-25  Score=247.41  Aligned_cols=355  Identities=15%  Similarity=0.185  Sum_probs=263.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q psy17194        278 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      +....++..+........+|.|..+ ++.+..+.+++.+...++..++.++.|+++||+|||+.+  ..+..+..++.++
T Consensus         4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~--~~~~~~~~~~~~~   80 (365)
T TIGR00900         4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVM--IGADLIRAVLVAV   80 (365)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHH--HHHHHHHHHHHHH
Confidence            4455666666777777788887765 688999999999999999999999999999999999965  5566555565555


Q ss_pred             hhcch-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        358 IPFST-----SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       358 ~~~~~-----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ..+..     +.+.+++.+++.+++.+...+...+...   +..++++|++++++.+....+|..++|.+++.+.+..||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~  157 (365)
T TIGR00900        81 LPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLP---DLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGI  157 (365)
T ss_pred             HHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            55555     8888888899999998887555555544   444558999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCc
Q psy17194        433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      ++.|++.++..++..+..+..+..++++               ++.        ++.+.   + ...             
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--------~~~~~---~-~~~-------------  197 (365)
T TIGR00900       158 KWAIWVDAVGFAISALLIVSVRIPELAA---------------SEI--------QALSN---A-VLR-------------  197 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccCCC---------------ccc--------cccch---h-HHH-------------
Confidence            9999887766555544433322100000               000        00000   0 000             


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                                                                                                +....+
T Consensus       198 --------------------------------------------------------------------------~~~~~~  203 (365)
T TIGR00900       198 --------------------------------------------------------------------------DTREGI  203 (365)
T ss_pred             --------------------------------------------------------------------------HHHhHH
Confidence                                                                                      000023


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhh-hcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLE-PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      +.++++|.++...+..++......... .+.|.|+++.+|++..+.|++.....++.+++.++.+++.||+++++  ...
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~  281 (365)
T TIGR00900       204 KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA--LMT  281 (365)
T ss_pred             HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH--HHH
Confidence            557788888877777777776666665 78899998889999999999999999999999999999999998877  455


Q ss_pred             HHHHHHhhHHhhhcchhh-hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        672 VGLVLEGLCCFIIPFSTS-YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       672 ~g~~~~~~~l~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      .+..+.+++++.+.+..+ .+...+..+..|++.+...+...+...+.++   ++++|++.|++++..++++.+||.+.|
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~g~~~~g  358 (365)
T TIGR00900       282 GAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVP---AELLGRVFGAQFSLSHAAWPLGLILAG  358 (365)
T ss_pred             HHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566666666666655443 5555667777788777665554444444444   888999999999999999999999999


Q ss_pred             HhHhhhC
Q psy17194        751 GIVDAIG  757 (871)
Q Consensus       751 ~l~~~~g  757 (871)
                      .+.|+.|
T Consensus       359 ~l~~~~g  365 (365)
T TIGR00900       359 PLADHLG  365 (365)
T ss_pred             HHHHHcC
Confidence            9998764

>PRK12382 putative transporter; Provisional

Probab=99.95  E-value=7.2e-25  Score=244.27  Aligned_cols=367  Identities=16%  Similarity=0.156  Sum_probs=250.5

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      ++.++.+.+..++.........+.+|.++++++|.|..+.|++.+.+.++..+++++.|+++||+||||.+  ..+.+..
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l--~~~~~~~   91 (392)
T PRK12382         14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSA--LQGMLAC   91 (392)
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHH--HHHHHHH
Confidence            44555666666666777778888899889888999999999999999999999999999999999999965  4444443


Q ss_pred             HHHHH---Hhhc-----chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        352 GLCCF---IIPF-----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       352 ~~~~~---~~~~-----~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      .++.+   ....     ..+.+.+++.+++.|++.+...+.....   ..+..++++|++++++.+....+|..++|.++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~---~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~  168 (392)
T PRK12382         92 GLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTW---GLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG  168 (392)
T ss_pred             HHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence            33322   2211     2466778888999999988764433333   33445669999999999999999999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      +.+.+..||++.+.+..+..++.   ..+.++.++.+             ++         +++  +.    +...    
T Consensus       169 ~~l~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~---------~~~--~~----~~~~----  213 (392)
T PRK12382        169 LLLHSHFGFAALALTTMVLPLLA---WAFNGTVRKVP-------------AH---------AGE--RP----SLWS----  213 (392)
T ss_pred             HHHHhccChHHHHHHHHHHHHHH---HHHHHhccCCC-------------CC---------ccc--Cc----hHHH----
Confidence            99999999998766544332221   12222110000             00         000  00    0000    


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       214 --------------------------------------------------------------------------------  213 (392)
T PRK12382        214 --------------------------------------------------------------------------------  213 (392)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  663 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~  663 (871)
                              ..+.+..+.+     ...+....+.....++|.|+++ .|++  +.++.+...+++.++++++.|++.||++
T Consensus       214 --------~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g  277 (392)
T PRK12382        214 --------VVGLIWKPGL-----GLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFG  277 (392)
T ss_pred             --------HHHHHHHhHH-----HHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence                    0001111111     1122233444555677888865 4665  4567777778888899999999999999


Q ss_pred             chhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHh
Q psy17194        664 TYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYA  743 (871)
Q Consensus       664 ~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~  743 (871)
                      +||  .+..+..+.+++++.+...++.+..++..+..|++.+...+....   ...+..+++++|++.|++++...+|+.
T Consensus       278 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~g~~~g~~~~~~~~g~~  352 (392)
T PRK12382        278 GVK--VAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGV---EVVKRVPSQVRGTALGGYAAFQDIAYG  352 (392)
T ss_pred             CCe--ehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            888  445566666666655555555555555666667766654443333   333444578899999999999999999


Q ss_pred             HhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        744 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       744 ~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +||.+.|.+.|+.||+++|.+.+++.+++....+..
T Consensus       353 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~  388 (392)
T PRK12382        353 VSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS  388 (392)
T ss_pred             HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999998887777655543

>TIGR00902 2A0127 phenyl proprionate permease family protein

Probab=99.95  E-value=7.8e-25  Score=242.57  Aligned_cols=367  Identities=13%  Similarity=0.103  Sum_probs=268.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      +.+....+..........+++|.|+++ +|.|..++|++.+.+.+...+++++.++++||+||+................
T Consensus         7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~   85 (382)
T TIGR00902         7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA   85 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence            334555666667778888999999865 7999999999999999999999999999999999754221111111111122


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      ..+..+++.+.+++.+.+++.+.+...+....    +... +.++|++++|.......+|.+++|.++|.+.+++||+..
T Consensus        86 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~a----l~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~  160 (382)
T TIGR00902        86 AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDA----LANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNI  160 (382)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHHccchhHHHH----HHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHH
Confidence            23345677888888777777776665333222    2222 346789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccc
Q psy17194        436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAAN  515 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (871)
                      |++.....++. .+....++..+  +             ++ .++    ++    +      .                 
T Consensus       161 f~~~~~~~~~~-~~~~~~~~~~~--~-------------~~-~~~----~~----~------~-----------------  192 (382)
T TIGR00902       161 LAILTAGLAFM-LIGFLIKPTIP--P-------------KD-AIP----ED----E------S-----------------  192 (382)
T ss_pred             HHHHHHHHHHH-HHHHHcCCCCC--C-------------Cc-ccc----cc----c------c-----------------
Confidence            88766542222 22222111000  0             00 000    00    0      0                 


Q ss_pred             cCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhh
Q psy17194        516 VGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKL  595 (871)
Q Consensus       516 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  595 (871)
                                                                                             +...+.+++
T Consensus       193 -----------------------------------------------------------------------~~~~~~~~~  201 (382)
T TIGR00902       193 -----------------------------------------------------------------------QGDSAFIAL  201 (382)
T ss_pred             -----------------------------------------------------------------------ccchhHHHH
Confidence                                                                                   000023678


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHH
Q psy17194        596 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV  675 (871)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~  675 (871)
                      +|+|+++...+..++.......+..+.|.|+++ +|.++.+.|+++....++.+++.++.+++.||++.|+  .+.++.+
T Consensus       202 l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~--~l~~~~~  278 (382)
T TIGR00902       202 LKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD--LLLISAI  278 (382)
T ss_pred             HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH--HHHHHHH
Confidence            899999998888888888888899999999976 8999999999999999999999999999999999988  6678888


Q ss_pred             HHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHH-HHHHHHHhHhhhhHHHhHh
Q psy17194        676 LEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGIVD  754 (871)
Q Consensus       676 ~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~-~~~~~g~~~gp~~~g~l~~  754 (871)
                      ..++..+.+++.++.+.++...+..|+..+...+..+....   +. |++.+++++|+++ +...+|..+||.++|.+.|
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~---~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~  354 (382)
T TIGR00902       279 ACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIA---AQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP  354 (382)
T ss_pred             HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888887788777777788888887876665433333   33 5778899999987 4678999999999999999


Q ss_pred             hhChHHHHHHHHHHHHHHHHH
Q psy17194        755 AIGFTALNFLIAFMNILYAPV  775 (871)
Q Consensus       755 ~~g~~~~~~~~a~~~~~~~~~  775 (871)
                      ++|+ ..|++.+++.+++.++
T Consensus       355 ~~g~-~~~~~~~~~~~~~~~~  374 (382)
T TIGR00902       355 TLGA-GTFVFMAIIAAAAFFL  374 (382)
T ss_pred             hccH-HHHHHHHHHHHHHHHH
Confidence            9986 6788888877765543

This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.

>KOG2532|consensus

Probab=99.95  E-value=3e-26  Score=253.12  Aligned_cols=365  Identities=13%  Similarity=0.176  Sum_probs=279.6

Q ss_pred             HhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchh--hHHHHHHHHHHHHHHh
Q psy17194        302 DNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS--YQMLMLPICGICFGMA  379 (871)
Q Consensus       302 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~l~g~g~~  379 (871)
                      .+++++..+.+++.+.+.+|++++++.+|++.||+|.|+++  ..+.++.+++.++.+++.+  .+.+++.|+++|++.+
T Consensus        66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~--~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g  143 (466)
T KOG2532|consen   66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVF--FISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQG  143 (466)
T ss_pred             ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHH--HHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHh
Confidence            35788999999999999999999999999999999999966  7788888888888877654  4467889999999999


Q ss_pred             hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hChhhHHHHHHHHHHHHHHHHHHHhhccc
Q psy17194        380 LVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA-IGFTALNFLIAFMNILYAPVLIYLKNIYD  458 (871)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~-~g~~~~f~~~~~~~~~~~~~~~~~~~~~~  458 (871)
                      ...+.......   ...|+++|++..++...+.++|.+++-++.|.+.+. +||+++|++.+++.++..++++++.....
T Consensus       144 ~~~pa~~~i~~---~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P  220 (466)
T KOG2532|consen  144 VLFPAIGSILA---KWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSP  220 (466)
T ss_pred             HHHhhhhceee---eECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            98555554433   345679999999999999999999999999999999 99999999999999988887776654211


Q ss_pred             CCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCcccc
Q psy17194        459 FKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETP  538 (871)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  538 (871)
                      .+...                 ...+|.+..        +.                                       
T Consensus       221 ~~h~~-----------------is~~El~~I--------~~---------------------------------------  236 (466)
T KOG2532|consen  221 SKHPN-----------------ISEKELKYI--------EK---------------------------------------  236 (466)
T ss_pred             ccCCC-----------------CCHHHHHHH--------Hh---------------------------------------
Confidence            11000                 000000000        00                                       


Q ss_pred             chhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHh
Q psy17194        539 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFL  618 (871)
Q Consensus       539 ~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  618 (871)
                                                         .+.+    .+...+.+.|+++++++|.+|...+..++.+++++.+
T Consensus       237 -----------------------------------~k~~----~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l  277 (466)
T KOG2532|consen  237 -----------------------------------GKSE----AHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLL  277 (466)
T ss_pred             -----------------------------------cccc----cccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence                                               0000    0000113458999999999999999999999999999


Q ss_pred             hhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCc-------hhhHHHHHHHHHHhhHHhhhcchhh--
Q psy17194        619 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT-------YQWLMVAVGLVLEGLCCFIIPFSTS--  689 (871)
Q Consensus       619 ~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~-------~~~~~~~~g~~~~~~~l~~~~~~~~--  689 (871)
                      ..++|.|+++++|+|..+.|++.+.+.+.+.+..+++|.++||.-.       +|+....++....+++++.+++.+.  
T Consensus       278 ~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~  357 (466)
T KOG2532|consen  278 LTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEH  357 (466)
T ss_pred             HHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCc
Confidence            9999999999999999999999999999999999999999998765       4556778888888888888877543  


Q ss_pred             hHHHHH-HHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHh---hhChHHHHHHH
Q psy17194        690 YQMLML-PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD---AIGFTALNFLI  765 (871)
Q Consensus       690 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~---~~g~~~~~~~~  765 (871)
                      .+..++ ..+..++ .|+   ..........|.. +++.+..+|+.|.+..+.+.++|.+.|.+..   ...|+++|.+.
T Consensus       358 ~~~a~~~l~~~~~~-~g~---~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~  432 (466)
T KOG2532|consen  358 RLLAVILLTIAIGL-SGF---NISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIA  432 (466)
T ss_pred             chHHHHHHHHHHHH-ccc---chhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHH
Confidence            222221 1111222 111   1223334444433 7889999999999999999999999999983   35799999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy17194        766 AFMNILYAPVLIYL  779 (871)
Q Consensus       766 a~~~~~~~~~~~~~  779 (871)
                      +++.++...+..++
T Consensus       433 a~i~~~~~i~f~~f  446 (466)
T KOG2532|consen  433 AGILIVGNIIFLFF  446 (466)
T ss_pred             HHHHHHhchheeEe
Confidence            99999888655444

>TIGR00903 2A0129 major facilitator 4 family protein

Probab=99.95  E-value=4.4e-25  Score=241.20  Aligned_cols=355  Identities=10%  Similarity=0.014  Sum_probs=242.9

Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      ....+.+.+|. +++++|+|..+.|++.+.+.+++.+++++.|+++||+|||+.+  ...+.....+.......++++.+
T Consensus         6 ~~~~~~~~lp~-i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~--~~~~~~~~~~~~~~~~~~~~~~l   82 (368)
T TIGR00903         6 IWVTFSPVLSL-VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFL--FGSLATFAAAAGRLLDPFNYEWL   82 (368)
T ss_pred             HHHHHHhhHHH-HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHH--HHHHHHHHHHHHHHHHhccHHHH
Confidence            44455556666 4667999999999999999999999999999999999988754  33333333333222233578889


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      ++.+++.|++.+..    .+......+.+|+++|++++++.+....+|..+++.+++.+.+..|||+.|++.+++.++..
T Consensus        83 ~~~R~l~G~g~~~~----~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~  158 (368)
T TIGR00903        83 LACQLLAALGQPFL----LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGI  158 (368)
T ss_pred             HHHHHHHHhHhHHH----HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence            99999999998854    22333335556779999999999999999999999999999999999999999887776665


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      ++.++..++.++.+                .+      .  .+.  +   +.                            
T Consensus       159 ~~~~~~lp~~p~~~----------------~~------~--~~~--~---~~----------------------------  181 (368)
T TIGR00903       159 ILVLAALPALPFQA----------------AE------G--FGF--K---DA----------------------------  181 (368)
T ss_pred             HHHHHHcCCCCCCC----------------CC------C--cch--H---HH----------------------------
Confidence            54443222100000                00      0  000  0   00                            


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  607 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  607 (871)
                                                                                   ..++++++++|.++...+.
T Consensus       182 -------------------------------------------------------------~~~~~~ll~~~~~~~~~~~  200 (368)
T TIGR00903       182 -------------------------------------------------------------VKEFGALAGRKDLWIIGAI  200 (368)
T ss_pred             -------------------------------------------------------------HHHHHHHHcChhHHHHHHH
Confidence                                                                         0024678999999999999


Q ss_pred             HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCch--hhHHHHHHHHHHhhHHhhhc
Q psy17194        608 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY--QWLMVAVGLVLEGLCCFIIP  685 (871)
Q Consensus       608 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~--~~~~~~~g~~~~~~~l~~~~  685 (871)
                      .++....++++..++|.|+++ .|++.. .|.......+...++   .++++||..|+  |.........+.++.+..++
T Consensus       201 ~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~  275 (368)
T TIGR00903       201 LGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALA  275 (368)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999965 678865 566655555544444   46777776543  22223333333444444444


Q ss_pred             chhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHH
Q psy17194        686 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  765 (871)
Q Consensus       686 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~  765 (871)
                      ...+....+..+...+++.....+   ....+..|.+|++.+|+++|+.|...++|+.++|.+.+.+..  |....|.+.
T Consensus       276 ~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~  350 (368)
T TIGR00903       276 FELNRLALFAFIGIAGLLMLPAYA---IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFL  350 (368)
T ss_pred             HccccHHHHHHHHHHHHhhhhhHH---HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHH
Confidence            433333333333333333333222   234555677778999999999999999999999999988774  788888888


Q ss_pred             HHHHHHHHHHHH
Q psy17194        766 AFMNILYAPVLI  777 (871)
Q Consensus       766 a~~~~~~~~~~~  777 (871)
                      ++..++++...+
T Consensus       351 ~~~~~i~~~~~~  362 (368)
T TIGR00903       351 AILITIAFAIAL  362 (368)
T ss_pred             HHHHHHHHHHHH
Confidence            888887776554

This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.

>PRK15402 multidrug efflux system translocase MdfA; Provisional

Probab=99.95  E-value=9.4e-25  Score=244.48  Aligned_cols=357  Identities=13%  Similarity=0.113  Sum_probs=258.3

Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      ....+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+|||+.+  ..+..+.+++.+.+...++.+.+
T Consensus        28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~l  104 (406)
T PRK15402         28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM--LAGVAFFILTCLAILLAQSIEQF  104 (406)
T ss_pred             hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHHHHHHHHHHccHHHH
Confidence            34455556665 4567899999999999999999999999999999999999965  66677777777777778888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      ++.+++.|++.+...+...+..   .+.+++++|+++.++......++..++|.+++.+.+..||++.|++.+++.++..
T Consensus       105 ~~~~~l~G~~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~  181 (406)
T PRK15402        105 TLLRFLQGIGLCFIGAVGYAAI---QESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSF  181 (406)
T ss_pred             HHHHHHHHhHhhhHHHHHHHHH---HHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence            8888998988877644444443   3445568889999998888889999999999999999999999998887776655


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      +..++..+.++++              .         +.+..   .   .+                             
T Consensus       182 ~~~~~~~~~~~~~--------------~---------~~~~~---~---~~-----------------------------  203 (406)
T PRK15402        182 FGLWRAMPETAGR--------------V---------GEKLS---L---KE-----------------------------  203 (406)
T ss_pred             HHHHHhCCCCCcc--------------c---------ccccc---H---HH-----------------------------
Confidence            4333221100000              0         00000   0   00                             


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  607 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  607 (871)
                                                                                  ...++++++++|.++...+.
T Consensus       204 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  223 (406)
T PRK15402        204 ------------------------------------------------------------LGRDYKLVLKNRRFVAGALA  223 (406)
T ss_pred             ------------------------------------------------------------HHHHHHHHHcCcHHHHHHHH
Confidence                                                                        00023567889988887777


Q ss_pred             HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcc-
Q psy17194        608 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF-  686 (871)
Q Consensus       608 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~-  686 (871)
                      .++.....+......|.|+++.+|+++.+.|+...+..++.+++.++.|++.||+++||  .+.++..+.+++++++.. 
T Consensus       224 ~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~--~~~~~~~~~~~g~~~~~~~  301 (406)
T PRK15402        224 LGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS--LIRMGLWPMVAGLLLAALA  301 (406)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHHHHHHHHHHH
Confidence            77666666666777899998889999999999988888899999999999999999887  555666665555554432 


Q ss_pred             ----hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHH
Q psy17194        687 ----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN  762 (871)
Q Consensus       687 ----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~  762 (871)
                          ..+.+++.+.++..+++.+...+........ .+   ++++|++.+++++.+.+|..+|+.+.+.+++..+.....
T Consensus       302 ~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~-~~---~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~  377 (406)
T PRK15402        302 TVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLF-SS---DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFN  377 (406)
T ss_pred             HHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhh-hc---cccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Confidence                1233445566777777777665443332222 22   478899999999999999999999999999988866655


Q ss_pred             HHHHHHHHHHHH
Q psy17194        763 FLIAFMNILYAP  774 (871)
Q Consensus       763 ~~~a~~~~~~~~  774 (871)
                      +..++..++...
T Consensus       378 ~~~~~~~~~~~~  389 (406)
T PRK15402        378 LFNLANGLLWLL  389 (406)
T ss_pred             HHHHHHHHHHHH
Confidence            544444444433

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.95  E-value=2.1e-25  Score=282.01  Aligned_cols=335  Identities=15%  Similarity=0.115  Sum_probs=249.2

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHH
Q psy17194        104 DSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMI---GLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGL  180 (871)
Q Consensus       104 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~---~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~  180 (871)
                      ....++..+++.++++++++++|+++||+|||+++..   +.++..+..+.+...++++.++++|+++|++.++..|+..
T Consensus        51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~  130 (1140)
T PRK06814         51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY  130 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence            3568999999999999999999999999999997643   2223333333333458999999999999999999999999


Q ss_pred             HHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCC
Q psy17194        181 AMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPES  260 (871)
Q Consensus       181 a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~  260 (871)
                      +++.+++ ++++|++++|+.+++.++|.++||+++|++.+..+|++.|+..++..++. ++..+..++.++.....+...
T Consensus       131 a~l~~~~-~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  208 (1140)
T PRK06814        131 SILPDHL-NKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAPDLKIDR  208 (1140)
T ss_pred             HhhHhhc-CccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCCeecc
Confidence            9999998 56899999999999999999999999999999999999995554444443 334444444332211111111


Q ss_pred             C----cccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc
Q psy17194        261 H----STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY  336 (871)
Q Consensus       261 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~  336 (871)
                      .    ....++.+.+++.++...+..++..+....+..++|.|+++.+|.+....|++.+...++.+++.++.|+++++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~  288 (1140)
T PRK06814        209 NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR  288 (1140)
T ss_pred             chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            1    112355677888888888877777777777888999999999999999999999999999999999999999887


Q ss_pred             CchhHHHHHHHHHHHHHHHHHhhcc--------------------hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy17194        337 PTYQWLMVAVGLVLEGLCCFIIPFS--------------------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR  396 (871)
Q Consensus       337 g~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~  396 (871)
                      .+++.+  ..+.++.+++.+.+.+.                    .+.+.+++..+++|++.+...+...+.   +.+..
T Consensus       289 ~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~  363 (1140)
T PRK06814        289 ITLLYV--PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAA---LQAWA  363 (1140)
T ss_pred             eeeeee--hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHH---HHhhC
Confidence            766533  22333333323222221                    455666667777788877764444443   34445


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-hhChhhHHHHHHHHHHH
Q psy17194        397 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-AIGFTALNFLIAFMNIL  445 (871)
Q Consensus       397 ~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~-~~g~~~~f~~~~~~~~~  445 (871)
                      |++.+|+++|+.++...++..+++.+.|.+.+ ..++...+++.+.+.++
T Consensus       364 p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~  413 (1140)
T PRK06814        364 NPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLI  413 (1140)
T ss_pred             CcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            66999999999999999999999999999875 44667666665554433

>PRK03633 putative MFS family transporter protein; Provisional

Probab=99.95  E-value=7.5e-25  Score=242.82  Aligned_cols=363  Identities=12%  Similarity=0.167  Sum_probs=254.2

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      ++.++.+.+..++.........+.+|.+.++ +|.|..++|++.+.+.++..+++++.|+++||+|+|+.+  ..+..+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~--~~~~~~~   81 (381)
T PRK03633          5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSY--YLASLIF   81 (381)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH--HHHHHHH
Confidence            3456677777778888888888999988764 799999999999999999999999999999999999955  6677777


Q ss_pred             HHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        352 GLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       352 ~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      +++.+.+++.++.+.+++.+++.|++.+...+......   .+..++++|+++++..+....+|..+||.+++.+.+...
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~  158 (381)
T PRK03633         82 AAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESAL---MCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM  158 (381)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence            78888888888999999999999999887644433333   334456889999999999999999999999999877543


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcC
Q psy17194        432 FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQ  511 (871)
Q Consensus       432 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (871)
                      +... +..+......+. ..+.+. ++  +          +  +        ++ ++                       
T Consensus       159 ~~~~-~~~~~~~~~~~~-~~~~~~-~~--~----------~--~--------~~-~~-----------------------  189 (381)
T PRK03633        159 SVLP-WVTGLVLAAILP-LLFTRI-LN--Q----------Q--A--------EN-HD-----------------------  189 (381)
T ss_pred             chHH-HHHHHHHHHHHH-HHHhcc-cC--C----------C--C--------CC-CC-----------------------
Confidence            3222 222222211111 111110 00  0          0  0        00 00                       


Q ss_pred             cccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc
Q psy17194        512 PAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP  591 (871)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  591 (871)
                                                                                                   ..+
T Consensus       190 -----------------------------------------------------------------------------~~~  192 (381)
T PRK03633        190 -----------------------------------------------------------------------------STS  192 (381)
T ss_pred             -----------------------------------------------------------------------------CCC
Confidence                                                                                         001


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      .++++++|.++......+.....+.....++|.|+++ .|.++.+.|+......++.+++++..|++.||+++|+  .+.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~--~l~  269 (381)
T PRK03633        193 IWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL--VLR  269 (381)
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH--HHH
Confidence            2345566666554433444444455556678999866 6999999999999999999999999999999999887  455


Q ss_pred             HHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHH
Q psy17194        672 VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  751 (871)
Q Consensus       672 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~  751 (871)
                      .+..+.+++...+.  . .......+..++++.+...+.....   ..+..++++.+.+.+.+++..++|+++||.+.|+
T Consensus       270 ~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~  343 (381)
T PRK03633        270 VQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYPVAMAW---ACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAM  343 (381)
T ss_pred             HHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHHHHHHH---HHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55555555444332  1 1222233444455444433433333   3343446677788888899999999999999999


Q ss_pred             hHhhhChHHHHHHHHHHHHHHHHH
Q psy17194        752 IVDAIGFTALNFLIAFMNILYAPV  775 (871)
Q Consensus       752 l~~~~g~~~~~~~~a~~~~~~~~~  775 (871)
                      +.|++|+.+.|.+.+.+.++....
T Consensus       344 l~~~~g~~~~f~~~~~~~l~~~~~  367 (381)
T PRK03633        344 LMQNYSDNLLFIMIASVSFIYLLM  367 (381)
T ss_pred             HHHHhCccHHHHHHHHHHHHHHHH
Confidence            999999999999888877766544

>PRK09528 lacY galactoside permease; Reviewed

Probab=99.95  E-value=2.6e-25  Score=250.00  Aligned_cols=390  Identities=12%  Similarity=0.056  Sum_probs=257.1

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      ..+|+|.++......++...+.....++++.|+++++|+++.+.|++.+...++..+++++.|+++||+|+|+.++.  +
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~--~   82 (420)
T PRK09528          5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW--I   82 (420)
T ss_pred             hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH--H
Confidence            45677888888888888888888899999999999999999999999999999999999999999999999996533  2


Q ss_pred             HHHHHHHHH---HhhcchhhH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCF---IIPFSTSYQ-MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       348 ~~~~~~~~~---~~~~~~~~~-~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      ..+.+++..   ......... .......+.++..+.......+......+.. .++++..+|.......+|.+++|.++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~~~~~  161 (420)
T PRK09528         83 ISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV-SRRSGFEYGRARMWGSLGWALCAFIA  161 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH-HhhccccchhhHHhhhHHHHHHHHHH
Confidence            222222211   111111100 0111112222222222222223333333322 34567788888889999999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      |.+.+ .+|++.|++.++..++.+++.+..++.++++   ++  . .++               +.++  +   +.    
T Consensus       162 g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~--~-~~~---------------~~~~--~---~~----  210 (420)
T PRK09528        162 GILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST---AK--V-ANA---------------LGAN--A---SA----  210 (420)
T ss_pred             HHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch---hh--h-ccc---------------hhcc--c---cc----
Confidence            99887 4899999887776665554444332211000   00  0 000               0000  0   00    


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (420)
T PRK09528        211 --------------------------------------------------------------------------------  210 (420)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc---CCCccchhhhhhccchhhhhhhhhhhhhhh
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL---TTDNWKIGMIWLPAFFPHVFGVVITVKLAK  660 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d  660 (871)
                         ......++++|+|.++...+..++....+......+|.|+.+.+   +.+..+.|++.....++.+++.++.|++.|
T Consensus       211 ---~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  287 (420)
T PRK09528        211 ---VSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIIN  287 (420)
T ss_pred             ---ccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               00001245677887765555554554555555566888876543   567778899999999999999999999999


Q ss_pred             ccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH-HHHHHH
Q psy17194        661 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYS  739 (871)
Q Consensus       661 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~-~~~~~~  739 (871)
                      |+++|+  ....+..+.+++.+.+++.++.+.++...+..+++.+....   ....+..+..+++.++++.+. +|+...
T Consensus       288 r~g~~~--~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~~~  362 (420)
T PRK09528        288 RIGAKN--ALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV---GVFKYITLNFDVRLSATIYLVGFQFAKQ  362 (420)
T ss_pred             HhCcch--hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCccceeeeeeehHHHHHH
Confidence            999988  55666667777767676666666555555555555444322   223444444557778887766 788899


Q ss_pred             HHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        740 LAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       740 ~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +|+.+||.+.|++.|..||+.+|.+.+++.++...+.++.
T Consensus       363 lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~  402 (420)
T PRK09528        363 LGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFT  402 (420)
T ss_pred             HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999888877766554443

>TIGR00890 2A0111 Oxalate/Formate Antiporter

Probab=99.95  E-value=2.4e-25  Score=246.90  Aligned_cols=353  Identities=12%  Similarity=0.054  Sum_probs=253.1

Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP  370 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  370 (871)
                      ......| ++++++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+  ..+..+.+++.+.+.++++.+.+++.
T Consensus        21 ~~~~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   97 (377)
T TIGR00890        21 TWTLLAP-PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVA--MLGGILYGLGFTFYAIADSLAALYLT   97 (377)
T ss_pred             hhhhHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchh--HHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3334444 56778999999999999999999999999999999999999965  67777888888888889999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVL  450 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~  450 (871)
                      +++.|++.+...+...+.   ..+ ..+++|+++.++......+|..+++++.+.+.+..||++.|++.+++.++..+..
T Consensus        98 ~~~~g~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~  173 (377)
T TIGR00890        98 YGLASAGVGIAYGIALNT---AVK-WFPDKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG  173 (377)
T ss_pred             HHHHhHHHHHHHHhHHHH---HHH-HcCcccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            998898888663333322   223 2347899999999999999998888888888888899999999888776665554


Q ss_pred             HHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccc
Q psy17194        451 IYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAP  530 (871)
Q Consensus       451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (871)
                      ++..+.+++++             .+       + +++..       +.                               
T Consensus       174 ~~~~~~~~~~~-------------~~-------~-~~~~~-------~~-------------------------------  194 (377)
T TIGR00890       174 AFLIGYPPGQL-------------IK-------T-NIEVS-------VK-------------------------------  194 (377)
T ss_pred             HHheecCchhc-------------cc-------c-Ccccc-------hh-------------------------------
Confidence            43332110000             00       0 00000       00                               


Q ss_pred             cccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHH
Q psy17194        531 STGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLM  610 (871)
Q Consensus       531 ~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  610 (871)
                                                                                ....++++++|.++...+..++
T Consensus       195 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  216 (377)
T TIGR00890       195 ----------------------------------------------------------DYTVWEMLRTPQFWVLYLSFFL  216 (377)
T ss_pred             ----------------------------------------------------------hhhHHHHHcCccHHHHHHHHHH
Confidence                                                                      0012456677777766655555


Q ss_pred             HHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhh-
Q psy17194        611 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS-  689 (871)
Q Consensus       611 ~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~-  689 (871)
                      ............+.|. +.+|++..+.+.+.....++.++++++.|++.||+++|+  ....+..+.+++++.+...++ 
T Consensus       217 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--~~~~~~~~~~~~~~~~~~~~~~  293 (377)
T TIGR00890       217 NAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK--TMSIVFGISAVGMAAMLFIPML  293 (377)
T ss_pred             HhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHcccc
Confidence            5555555555667776 457899989999999999999999999999999999877  455566666666555543332 


Q ss_pred             -hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHH
Q psy17194        690 -YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFM  768 (871)
Q Consensus       690 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~  768 (871)
                       ....+...+..+++.+...+.......+.   .++++++++.|+.+...++|+.+||.+.|.+.++.||++.|.+.+++
T Consensus       294 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~  370 (377)
T TIGR00890       294 NDVLFLATVALVFFTWGGTISLFPSLVSDI---FGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAF  370 (377)
T ss_pred             hhHHHHHHHHHHHHHhccchhccHHHHHHH---hhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHH
Confidence             22222334445555554443333334443   44888999999999999999999999999999999999999888877


Q ss_pred             HHHHH
Q psy17194        769 NILYA  773 (871)
Q Consensus       769 ~~~~~  773 (871)
                      .+++.
T Consensus       371 ~~~~~  375 (377)
T TIGR00890       371 ALTSL  375 (377)
T ss_pred             HHHhc
Confidence            66643

>PRK03893 putative sialic acid transporter; Provisional

Probab=99.95  E-value=1.4e-24  Score=250.11  Aligned_cols=423  Identities=11%  Similarity=0.050  Sum_probs=247.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      +..+.+..++..+........+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~   98 (496)
T PRK03893         22 FSAAWLGYLLDGFDFVLITLVLTE-VQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAM--VISIVLFSVG   98 (496)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHH
Confidence            334444455555555555555555 5677999999999999999999999999999999999999955  6677777778


Q ss_pred             HHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhh
Q psy17194        355 CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTA  434 (871)
Q Consensus       355 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~  434 (871)
                      .+.+.+.++.+.+++.+++.|++.+...+.....   +.+.+++++|++++++......+|..++|.+.+.+.+..||++
T Consensus        99 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~  175 (496)
T PRK03893         99 TLACGFAPGYWTLFIARLVIGMGMAGEYGSSATY---VIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRA  175 (496)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHH
Confidence            8888888899999999999999888764444333   4555667999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccc
Q psy17194        435 LNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       435 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      .|++..+..++.    ++..+...+.+. .+. + .++     .+     +.+       +..+....            
T Consensus       176 ~f~~~~~~~~~~----~~~~~~~p~~~~-~~~-~-~~~-----~~-----~~~-------~~~~~~~~------------  219 (496)
T PRK03893        176 LFFIGILPIIFA----LWLRKNLPEAED-WKE-K-HAG-----KA-----PVR-------TMVDILYR------------  219 (496)
T ss_pred             HHHHHHHHHHHH----HHHHHhCCCchh-hhh-h-ccc-----cc-----cch-------hHHHHHhc------------
Confidence            988643322221    111111100000 000 0 000     00     000       00000000            


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  594 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  594 (871)
                         ....   .........  ....+...........+.....+.+.....  ..+..+...                  
T Consensus       220 ---~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------------  271 (496)
T PRK03893        220 ---GEHR---IINILLTLA--AAAALWFCFAGNLQNAAIVAVLGLLCAAIF--ISFMVQSSG------------------  271 (496)
T ss_pred             ---chhH---HHHHHHHHH--HHHHHHHHHHhhhcchhHHHHHHHHHHHHH--HHHHHHhcc------------------
Confidence               0000   000000000  000000000000001111111111111111  111111000                  


Q ss_pred             hccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHH
Q psy17194        595 LFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  674 (871)
Q Consensus       595 l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~  674 (871)
                       .+.+......+..+......+....++|.|+++.+|++..+.|+++.+..++.+++.++.|++.||+++|+.  ...+.
T Consensus       272 -~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~--~~~~~  348 (496)
T PRK03893        272 -KRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA--YVCSL  348 (496)
T ss_pred             -cchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH--HHHHH
Confidence             011122222222222222223456789999988899999999999999999999999999999999998874  44444


Q ss_pred             HHHhhHHhhhcc--hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHh
Q psy17194        675 VLEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGI  752 (871)
Q Consensus       675 ~~~~~~l~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l  752 (871)
                      .+.+++.+++..  ..+.+......++.++......+...+   ...+..+++++|+++|+.+...++|+.+||.+.|.+
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l  425 (496)
T PRK03893        349 LISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPK---LIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALI  425 (496)
T ss_pred             HHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHH---HHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHH
Confidence            444443332222  222222222222222211111222222   233444578899999999999999999999999999


Q ss_pred             HhhhChHHHHHHHHHHHHHHH
Q psy17194        753 VDAIGFTALNFLIAFMNILYA  773 (871)
Q Consensus       753 ~~~~g~~~~~~~~a~~~~~~~  773 (871)
                      .|++|++.++...++...+.+
T Consensus       426 ~~~~g~~~~~~~~~~~~~~~~  446 (496)
T PRK03893        426 AQRLDLGTALASLSFSLTFVV  446 (496)
T ss_pred             hccCChHHHHHHHHHHHHHHH
Confidence            999999988876665544433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.94  E-value=5.7e-25  Score=249.11  Aligned_cols=330  Identities=18%  Similarity=0.204  Sum_probs=248.3

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhh----hCCch-HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHH
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDR----IGYDL-PMMIGLCIMFLSTALFACGRS------YGVLFFARSLQG  169 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~s------~~~l~~~r~l~G  169 (871)
                      +.++.++|++.++..+..++..|+.|+++||    +|||| .++.+.+..+++.+++.+.++      +..+++.+++.+
T Consensus        31 g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (437)
T TIGR00792        31 GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLG  110 (437)
T ss_pred             CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence            4499999999999999999999999999998    67755 577788888888888776653      456777889999


Q ss_pred             hhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-------hhCChhHHHHHHHHHHHHHHHH
Q psy17194        170 VGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQ-------FAGKEIPFLILAFVSLLDGFML  242 (871)
Q Consensus       170 ~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~-------~~gwr~~f~~~~~~~l~~~i~~  242 (871)
                      ++.+...+...++..|...++++|++..++.+.+..+|.++++.+.+.+..       ..+||+.+++.++++++..++.
T Consensus       111 ~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~  190 (437)
T TIGR00792       111 LFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIIC  190 (437)
T ss_pred             HHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHH
Confidence            999988888889999986567899999999999999998888777666553       3579999999999888877776


Q ss_pred             HHhcccchhhhccCCCC-CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHh
Q psy17194        243 LLVMKPVKEQLNQKKPE-SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFP  321 (871)
Q Consensus       243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~  321 (871)
                      ++..+|.+++.++++++ .+.....++++++|.++..+...++..........+.+.|.++.++ ++...+++.....++
T Consensus       191 ~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~  269 (437)
T TIGR00792       191 FFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVA  269 (437)
T ss_pred             HcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHH
Confidence            66666654221111111 1112345667889988887777777666666655555555555555 455667777777889


Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc-hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc----c
Q psy17194        322 HVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDV----R  396 (871)
Q Consensus       322 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~----~  396 (871)
                      .+++.++.++++||+|+|+.+  ..+..+..++.+...+. ++.+..++..++.+++.+...+...+..++..|.    .
T Consensus       270 ~ii~~~~~~~l~~r~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  347 (437)
T TIGR00792       270 GLIGVLLFPRLVKKFGRKILF--AGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKT  347 (437)
T ss_pred             HHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence            999999999999999998855  55555555555444443 3445555666777888887766666776666552    1


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        397 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       397 ~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      +++.+|.++|+.++...+|..+++.+.|.+.+..||.
T Consensus       348 ~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~  384 (437)
T TIGR00792       348 GVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV  384 (437)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            3456799999999999999999999999999988764

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>PRK11195 lysophospholipid transporter LplT; Provisional

Probab=99.94  E-value=9e-25  Score=242.45  Aligned_cols=378  Identities=14%  Similarity=0.084  Sum_probs=260.1

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      +|.++.+....++..+.........+.+ .++++.++.+.+++.+.+.+...+..++.|+++||+|||+++  ..+..+.
T Consensus         2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl--~~~~~~~   78 (393)
T PRK11195          2 SKGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVM--FIANGIK   78 (393)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhh--HHHHHHH
Confidence            3556666777777776655555555554 456788899999999999999999999999999999999965  6666666


Q ss_pred             HHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        352 GLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       352 ~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      +++.+.+.+..+.   ++.++++|++.+...+...+...+..   |+++|++++|+.+....++..+||.++|.+.+.. 
T Consensus        79 ~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~---~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-  151 (393)
T PRK11195         79 LLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL---PGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-  151 (393)
T ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence            6666655554443   56678889999888666666655554   4599999999999999999999999999999864 


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcC
Q psy17194        432 FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQ  511 (871)
Q Consensus       432 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  511 (871)
                      |+..+.+.+...++.......+++.+.+    +         ++.           + .+ .....+             
T Consensus       152 ~~~~~~i~~~~~~~~~~~~~~l~~~~~~----~---------~~~-----------~-~~-~~~~~~-------------  192 (393)
T PRK11195        152 AEAALAVCALIYLLAALFNLFIPRLGAR----R---------PGQ-----------S-WN-PIALLR-------------  192 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCccc----c---------ccc-----------C-CC-HHHHHH-------------
Confidence            6666665554433333222222210000    0         000           0 00 000000             


Q ss_pred             cccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccc
Q psy17194        512 PAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP  591 (871)
Q Consensus       512 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  591 (871)
                                                                               .+                  ...
T Consensus       193 ---------------------------------------------------------~~------------------~~~  197 (393)
T PRK11195        193 ---------------------------------------------------------DF------------------FHA  197 (393)
T ss_pred             ---------------------------------------------------------HH------------------HHH
Confidence                                                                     00                  001


Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      ++.++++|.+........+.+.........+|.|+++.+|+++.+.|+++.+.+++.+++++..+++.||.++++  .+.
T Consensus       198 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~--~~~  275 (393)
T PRK11195        198 CRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR--VLP  275 (393)
T ss_pred             HHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--hHH
Confidence            245667777665555555555556666677888999999999999999999999999999999999999988777  444


Q ss_pred             HHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccc-cchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        672 VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV-YGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       672 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      .++. .++..+.+++.++.+...+.++..|++.+...++..+..+...+   ++. +|++.|+.|+.++++..++..+.+
T Consensus       276 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~---~~~~~g~~~a~~~~~~~~~~~~~~~~~~  351 (393)
T PRK11195        276 AGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRGH---VLVGAGHSIAVQNFNENLAMLLMLGLYS  351 (393)
T ss_pred             HHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCc---ccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence            5543 33444444455555555566667788777776666666554322   333 699999999999999999999998


Q ss_pred             HhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        751 GIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       751 ~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      .+ +.+|-+..+.+.+...++...+.+.++
T Consensus       352 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (393)
T PRK11195        352 LL-VKLGVPVVAVIVGFGLLVALAMALLWR  380 (393)
T ss_pred             HH-HHcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            55 788988888777666666554444443

>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional

Probab=99.94  E-value=1.6e-24  Score=242.79  Aligned_cols=372  Identities=12%  Similarity=0.058  Sum_probs=250.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      ...++............|. +.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+  ..+..+..++.+++.
T Consensus        22 ~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~   98 (406)
T PRK11551         22 LVALLEGLDLQSAGVAAPR-MAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRIL--IVSVALFGLFSLATA   98 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH--HHHHHHHHHHHHHHH
Confidence            3344444444445555555 4566899999999999999999999999999999999999965  666666777777777


Q ss_pred             cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH
Q psy17194        360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  439 (871)
Q Consensus       360 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~  439 (871)
                      +.++.+.+++.+++.|++.+...+......   .+.+++++|++++++.+....+|..+++.+++.+.+..+|++.|++.
T Consensus        99 ~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  175 (406)
T PRK11551         99 QAWDFPSLLVARLLTGVGLGGALPNLIALT---SEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVG  175 (406)
T ss_pred             HhccHHHHHHHHHHHHhhHHHHHHHHHHHH---HHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHH
Confidence            888999899999999998887744444443   44455689999999999999999999999999998989999999987


Q ss_pred             HHHHHHHHHHHHH-HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCc
Q psy17194        440 AFMNILYAPVLIY-LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGT  518 (871)
Q Consensus       440 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (871)
                      +++.++..++... .++..+.    .+   . ++           .+ +..     +....                   
T Consensus       176 ~~~~~~~~~~~~~~l~~~~~~----~~---~-~~-----------~~-~~~-----~~~~~-------------------  211 (406)
T PRK11551        176 GVGPLLLVPLLMRWLPESRAF----AQ---A-AG-----------AG-KQR-----APVLR-------------------  211 (406)
T ss_pred             HHHHHHHHHHHHHhCCCChhH----Hh---c-cC-----------cc-hhh-----hhhHH-------------------
Confidence            7665554443332 2221000    00   0 00           00 000     00000                   


Q ss_pred             CCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccc
Q psy17194        519 NGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD  598 (871)
Q Consensus       519 ~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  598 (871)
                                                                                              ...+..+.
T Consensus       212 ------------------------------------------------------------------------~~~~~~~~  219 (406)
T PRK11551        212 ------------------------------------------------------------------------ALFGEGRA  219 (406)
T ss_pred             ------------------------------------------------------------------------HHhhhhhh
Confidence                                                                                    00000011


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHh
Q psy17194        599 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  678 (871)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~  678 (871)
                      +.........++.....+....++|.|+++ +|+++.+.|+.+....++.+++.++.|++.||+++|+.  ...+....+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~--~~~~~~~~~  296 (406)
T PRK11551        220 TATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV--VLLIYAGIL  296 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH--HHHHHHHHH
Confidence            122222233344445556667788999865 79999999999999999999999999999999998773  334444444


Q ss_pred             hHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-
Q psy17194        679 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-  757 (871)
Q Consensus       679 ~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-  757 (871)
                      ++++.+....+.+.+.+..+..+++.+...+...+...   +..|++++|++.|+.++..++|+.+||.+.|.+.++.+ 
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~  373 (406)
T PRK11551        297 ASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAP---LFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS  373 (406)
T ss_pred             HHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc
Confidence            55544444444444444445555554444443333344   44458889999999999999999999999999999754 


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        758 FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       758 ~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +...+.+.+.+.+++..+.+..
T Consensus       374 ~~~~~~~~~~~~~~~~~~~~~~  395 (406)
T PRK11551        374 TVGVIGASIPVILVAALAALLL  395 (406)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH
Confidence            4555555555555555544444

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.94  E-value=1.1e-24  Score=276.81  Aligned_cols=336  Identities=15%  Similarity=0.115  Sum_probs=250.5

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHhhhhhhhhhH
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFA---CGRSYGVLFFARSLQGVGSAFADTSG  179 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~---~a~s~~~l~~~r~l~G~~~g~~~~~~  179 (871)
                      +....+++.+++.+++.++++++|+++||+|||++++++.++.+++.++..   .+++++.++++|+++|++.+...++.
T Consensus        45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~  124 (1146)
T PRK08633         45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK  124 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence            567789999999999999999999999999999999998877666555443   45789999999999999999999999


Q ss_pred             HHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh--------h-CChhHHHHHHHHHHHHHHHHHHhcccch
Q psy17194        180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF--------A-GKEIPFLILAFVSLLDGFMLLLVMKPVK  250 (871)
Q Consensus       180 ~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~--------~-gwr~~f~~~~~~~l~~~i~~~~~~~~~~  250 (871)
                      .++++|++ |+++|++++|+.+.+.++|.++|+++++++.+.        + +|++.+.+..+...+..++..+..++.+
T Consensus       125 ~~~i~~~~-~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (1146)
T PRK08633        125 YGIIPELV-GKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVP  203 (1146)
T ss_pred             HhhhHHhc-CcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCC
Confidence            99999997 668999999999999999999999999999876        2 3445554444444333334444455543


Q ss_pred             hhhccC--CCCCC----cccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCch-hHHHHHHhhHHhHH
Q psy17194        251 EQLNQK--KPESH----STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW-KIGMIWLPAFFPHV  323 (871)
Q Consensus       251 ~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~-~~g~~~~~~~~~~~  323 (871)
                      +.....  +....    ....++.+++++.++...+..++..........++|.|+.+.+|.+.. ..+++.+...++.+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~  283 (1146)
T PRK08633        204 AAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIG  283 (1146)
T ss_pred             CCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence            322111  00000    112344567778877776666666666667778889999999999998 99999999999999


Q ss_pred             HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhh
Q psy17194        324 FGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGS  403 (871)
Q Consensus       324 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~  403 (871)
                      ++.++.+++.||+++++.+  .++.++.+++.+++.+..+.+.+++..++.+++.+...+....   .+.+..|++.||+
T Consensus       284 ~g~~~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~p~~~rg~  358 (1146)
T PRK08633        284 IGSLLAGRLSGRHIELGLV--PLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNA---LIQFRAPEKELGK  358 (1146)
T ss_pred             HHHHHHHHHhCCceEccch--hHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHH---HHhhcCCccchhh
Confidence            9999999999999988754  4555556666666666667776667777778877776433333   3344456789999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh-hChhhHHHHHHHHHH
Q psy17194        404 IYAIADISYSLAYAIGPIVAGGIVDA-IGFTALNFLIAFMNI  444 (871)
Q Consensus       404 a~gi~~~~~~lg~~igp~l~g~l~~~-~g~~~~f~~~~~~~~  444 (871)
                      ++|+.++...+|.++++.+++.+... .++...+++.+.+.+
T Consensus       359 ~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  400 (1146)
T PRK08633        359 VLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL  400 (1146)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence            99999999999998888887766542 344455555544433

>PRK10642 proline/glycine betaine transporter; Provisional

Probab=99.94  E-value=3.4e-24  Score=245.20  Aligned_cols=383  Identities=15%  Similarity=0.107  Sum_probs=233.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchh-HHH-----HHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK-IGM-----IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV  349 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~-~g~-----~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~  349 (871)
                      ....+..++..+....+.... .++.+.++.+... ..+     ..+...++..+++++.|+++||+|||+.+  ..+++
T Consensus        19 ~~~~~g~~~~~~d~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--~~~~~   95 (490)
T PRK10642         19 TAASLGNAMEWFDFGVYGFVA-YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL--AITIV   95 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH--HHHHH
Confidence            333444455444444444344 4566666533221 122     24666788999999999999999999965  78888


Q ss_pred             HHHHHHHHhhcchhhHH--------HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q psy17194        350 LEGLCCFIIPFSTSYQM--------LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  421 (871)
Q Consensus       350 ~~~~~~~~~~~~~~~~~--------l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~  421 (871)
                      +.+++.++++++++++.        +++.++++|++.+...+....   .+.+.+|+++||++.++...+..+|..+++.
T Consensus        96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~---~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~  172 (490)
T PRK10642         96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASI---FVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG  172 (490)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHH---HHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            88999999999888764        678899999999987544444   4555566799999999998888888888876


Q ss_pred             HHHHHH--------hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccc
Q psy17194        422 VAGGIV--------DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDY  493 (871)
Q Consensus       422 l~g~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  493 (871)
                      +...+.        +.+|||+.|++.+++.++...+....++    ++...+..+..++             . +. +  
T Consensus       173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~e----sp~~~~~~~~~~~-------------~-~~-~--  231 (490)
T PRK10642        173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEE----TPAFQQHVDKLEQ-------------G-DR-E--  231 (490)
T ss_pred             HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCC----ChhHHHHHHhhhh-------------h-cc-c--
Confidence            665543        2579999999866544432221111111    0000000000000             0 00 0  


Q ss_pred             cccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcc
Q psy17194        494 KNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK  573 (871)
Q Consensus       494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  573 (871)
                          +.           .+                                                             
T Consensus       232 ----~~-----------~~-------------------------------------------------------------  235 (490)
T PRK10642        232 ----GL-----------QD-------------------------------------------------------------  235 (490)
T ss_pred             ----cc-----------cc-------------------------------------------------------------
Confidence                00           00                                                             


Q ss_pred             cchhhhccCCCCCCcccchhhhcc-chh-HHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhh
Q psy17194        574 PVKEQLNQKKPESHSTVPIWKLFM-DPY-IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFG  651 (871)
Q Consensus       574 ~~~~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~  651 (871)
                                   ....++.++++ +++ +.......++....++++..++|.|+++.+|++..+.++......++.+++
T Consensus       236 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~  302 (490)
T PRK10642        236 -------------GPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFV  302 (490)
T ss_pred             -------------cccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                         00002233333 222 222333344556778888899999998889999988888888888999999


Q ss_pred             hhhhhhhhhccCchhhHHHHHHHHHHh-hHH--hhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccc
Q psy17194        652 VVITVKLAKLYPTYQWLMVAVGLVLEG-LCC--FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYG  728 (871)
Q Consensus       652 ~~~~g~l~d~~~~~~~~~~~~g~~~~~-~~l--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g  728 (871)
                      .++.|+++||+|+|+  .+..+.++.. .++  +....+.+...+++..+..+++.+...........   +.+|++.||
T Consensus       303 ~~~~g~l~dr~grr~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~---~~~p~~~Rg  377 (490)
T PRK10642        303 QPVMGLLSDRFGRRP--FVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLP---AMFPTHIRY  377 (490)
T ss_pred             HHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCccch
Confidence            999999999999987  3344433222 121  21112223333444444444443332222222222   345689999


Q ss_pred             hHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        729 SIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       729 ~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      ++.|+.+....+++.++|.+.|.+.+..+ +...+++.++..++.....++.
T Consensus       378 ~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~  429 (490)
T PRK10642        378 SALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM  429 (490)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence            99997544456678899999999988765 5555555555555555444444

>KOG2533|consensus

Probab=99.94  E-value=1.3e-25  Score=248.21  Aligned_cols=340  Identities=14%  Similarity=0.060  Sum_probs=249.2

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHH
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGL  180 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~  180 (871)
                      +....+.+.+.+++.++++++.+++|.+.||++-.+.+....+++++-.++....+|++.+++.|++.|+.++..+|...
T Consensus        77 ~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~  156 (495)
T KOG2533|consen   77 KLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVV  156 (495)
T ss_pred             chhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHH
Confidence            45778999999999999999999999999999999999998888888888888899999999999999999999999999


Q ss_pred             HHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh------hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc
Q psy17194        181 AMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQ------FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN  254 (871)
Q Consensus       181 a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~------~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~  254 (871)
                      .+++.|| .+++|++.+|++.+..++|.++|.+++..+.+      ..||||.|++.+++.++..+++++++|+.|++..
T Consensus       157 ~~lg~wy-~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~  235 (495)
T KOG2533|consen  157 AILGNWY-GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAW  235 (495)
T ss_pred             HHHHhhc-ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhcc
Confidence            9999998 57899999999999999999999999988643      4589999999999999999999999998775210


Q ss_pred             ---------------cCCC----CCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHH
Q psy17194        255 ---------------QKKP----ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW  315 (871)
Q Consensus       255 ---------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~  315 (871)
                                     +...    ++.+....++.+++|.+|...+..++.....+.+..++|.|+++..|+|..+++.+.
T Consensus       236 fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls  315 (495)
T KOG2533|consen  236 FLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLS  315 (495)
T ss_pred             ccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcccc
Confidence                           0000    112334667889999999999999999999999999999999986679999999999


Q ss_pred             HhhHHhHHHHHHHHHHHHhhc---CchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy17194        316 LPAFFPHVFGVVITVKLAKLY---PTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL  392 (871)
Q Consensus       316 ~~~~~~~~~~~~~~g~l~dr~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~  392 (871)
                      +.+.++.+++.++.|.++||.   ..++........+...++...+....+........+....+.....+......+..
T Consensus       316 ~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~  395 (495)
T KOG2533|consen  316 TPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSAN  395 (495)
T ss_pred             chHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhcccc
Confidence            999999999999999999994   23333322333333334434443333333333222222232332222222222222


Q ss_pred             hccccccchhhHHHHHHHHHHHHHHHHHH-HHHHHHhhhChhhHHHHHHHHH
Q psy17194        393 VDVRYVSVYGSIYAIADISYSLAYAIGPI-VAGGIVDAIGFTALNFLIAFMN  443 (871)
Q Consensus       393 ~~~~~~~~rg~a~gi~~~~~~lg~~igp~-l~g~l~~~~g~~~~f~~~~~~~  443 (871)
                      .+  +..++-+..+....+.+.+++++|. .-+.....++|.+.|......+
T Consensus       396 ~~--g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~~  445 (495)
T KOG2533|consen  396 LA--GNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAAC  445 (495)
T ss_pred             cc--chHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHHH
Confidence            21  2233444444444444444444443 3344444567888885444333

>PRK15011 sugar efflux transporter B; Provisional

Probab=99.94  E-value=1.5e-23  Score=233.28  Aligned_cols=373  Identities=14%  Similarity=0.089  Sum_probs=235.9

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTYQWLMVAVGLVL  350 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~  350 (871)
                      |...+.+.+..++.........+.++.|+++++|.+..++|++.+...+ +..++.+.+++ .||+|+||.++ ..+...
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~-~~~~~~   91 (393)
T PRK15011         14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLI-VFCCLL   91 (393)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHH-HHHHHH
Confidence            4445555666788888888889999999999999999999999766544 55666666666 99999988542 233344


Q ss_pred             HHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-ccccch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        351 EGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDV-RYVSVY--GSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       351 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~r--g~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      .+++..+++++++.+.+++...+.+...+..    .+....+... .+++.|  +...++.+....+|.+++|++++.+.
T Consensus        92 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~  167 (393)
T PRK15011         92 GVLACTLFAWNRNYFVLLFVGVFLSSFGSTA----NPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA  167 (393)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            4455556667777776544333333222222    3333333332 222333  34557888889999999999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      +++||+..|++.++..++..+..++..+..++++            + + .        ++.       .+.        
T Consensus       168 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~-~--------~~~-------~~~--------  210 (393)
T PRK15011        168 MGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKEL------------P-L-A--------TGT-------LEA--------  210 (393)
T ss_pred             HhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCC------------c-c-c--------ccc-------ccc--------
Confidence            9999999999888766665544333222100000            0 0 0        000       000        


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                   .  
T Consensus       211 -----------------------------------------------------------------------------~--  211 (393)
T PRK15011        211 -----------------------------------------------------------------------------P--  211 (393)
T ss_pred             -----------------------------------------------------------------------------c--
Confidence                                                                                         0  


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                           ++  +.+..+.........+...+.+..++|.|+++.+|+++.+.|++.....+..+++.++.|+++||+++||.
T Consensus       212 -----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~  284 (393)
T PRK15011        212 -----RR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFL  284 (393)
T ss_pred             -----cc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence                 00  00011111112233333444455679999999999999999998887777788899999999999998873


Q ss_pred             HHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhh
Q psy17194        668 LMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  747 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~  747 (871)
                        ...+.....+.+..+...++.+..+...+..+++.+........   +..|.. ++++|+++++++...++|+.+||.
T Consensus       285 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~---~~~~~~-p~~~g~~~~~~~~~~~lg~~~g~~  358 (393)
T PRK15011        285 --MRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGML---YFQDLM-PGQAGSATTLYTNTSRVGWIIAGS  358 (393)
T ss_pred             --HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhC-CCCcchHHHHHHHHHHHHHHHHHH
Confidence              33444443333333333344444333333333333333222222   222333 567899999999999999999999


Q ss_pred             hHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        748 VAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       748 ~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      ++|.+.|+.||+..+.+.+++.+++....++.
T Consensus       359 l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~  390 (393)
T PRK15011        359 LAGIVAEIWNYHAVFWFALVMIIATLFCLLRI  390 (393)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999988877777766555444

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.94  E-value=5.8e-24  Score=240.54  Aligned_cols=382  Identities=12%  Similarity=0.112  Sum_probs=259.2

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      +++.+..+++..+...+.++...+.++.+.++ +                           +.+..+.+++.+.+.....
T Consensus        12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l---------------------------g~~~~~a~~i~~~~~~~~~   64 (489)
T PRK10207         12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL---------------------------GFSQEQAFITFGAFAALVY   64 (489)
T ss_pred             CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------------------------CCCHHHHHHHHHHHHHHHH
Confidence            34556667777777888888887877777654 4                           4488899999999998888


Q ss_pred             HhhhhhhHhhhh-hCCchHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHhhhhhhhhhHHHHhhcccCChh-hHHHH
Q psy17194        120 MVNPFSGALIDR-IGYDLPMMIGLCIMFLSTALFACGRSYGV-LFFARSLQGVGSAFADTSGLAMIADRFTEEN-ERSQA  196 (871)
Q Consensus       120 ~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~s~~~-l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~-~r~~~  196 (871)
                      +..+++|+++|| +||||+++++.++++++.++++++.+... ++++|+++|+|.|...|...++++|.+++++ +|+++
T Consensus        65 ~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~  144 (489)
T PRK10207         65 GLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA  144 (489)
T ss_pred             HHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence            889999999999 99999999999999999999999876444 5589999999999999999999999985543 56889


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc-cCCCCCCc-------------
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN-QKKPESHS-------------  262 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~-------------  262 (871)
                      +++++.+.++|.++||.+++++.+++|||+.|++.++. ++..++.+.+.++..++.+ +.++++.+             
T Consensus       145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~  223 (489)
T PRK10207        145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVV  223 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHH
Confidence            99999999999999999999999999999999997553 3333444443332211110 00000000             


Q ss_pred             -------------c--------------------cchhhhhcchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhCCC
Q psy17194        263 -------------T--------------------VPIWKLFMDPYIAVCSGA--LLMANVALAFLEPTISLWIEDNLTTD  307 (871)
Q Consensus       263 -------------~--------------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~s  307 (871)
                                   .                    ....+.+|+|.+....+.  ..+....+......++.+.++..+.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~  303 (489)
T PRK10207        224 MIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHE  303 (489)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhcccc
Confidence                         0                    000123344443332211  33333444455566777776533321


Q ss_pred             c----hhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhH-----HHHHHHHHHHHHHHHHh-----hc-----chhhHHHH
Q psy17194        308 N----WKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW-----LMVAVGLVLEGLCCFII-----PF-----STSYQMLM  368 (871)
Q Consensus       308 ~----~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-----~~~~~~~~~~~~~~~~~-----~~-----~~~~~~l~  368 (871)
                      .    ....++.+...+..++..++.+++.||.++|+.     ..+..++++.+++.+..     ..     ..+.+.++
T Consensus       304 ~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i  383 (489)
T PRK10207        304 ILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIV  383 (489)
T ss_pred             ccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHH
Confidence            1    122444455556676778888999999988752     01244555555444321     11     13456667


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----------hhChhhHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD----------AIGFTALNFL  438 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~----------~~g~~~~f~~  438 (871)
                      ...++.++|.+...+......   ....|++.+|.++|+++...++|..++..+++....          ...+.+.|..
T Consensus       384 ~~~~l~g~Ge~~~~~~g~~~~---~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~  460 (489)
T PRK10207        384 LVYLFQSLGELFISALGLAMI---AALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGK  460 (489)
T ss_pred             HHHHHHHHHHHHHhHHHHHHH---HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHH
Confidence            778888999998855544444   344566999999999999999999999888875521          1125677777


Q ss_pred             HHHHHHHHHHHHHHH
Q psy17194        439 IAFMNILYAPVLIYL  453 (871)
Q Consensus       439 ~~~~~~~~~~~~~~~  453 (871)
                      .++..++..++.+..
T Consensus       461 ~~~~~~~~~v~~~~~  475 (489)
T PRK10207        461 IGLVTLGVAVVMALM  475 (489)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            776666555554443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.94  E-value=1.7e-24  Score=237.95  Aligned_cols=319  Identities=14%  Similarity=0.067  Sum_probs=235.6

Q ss_pred             hhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhh-----C
Q psy17194         59 YMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI-----G  133 (871)
Q Consensus        59 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----G  133 (871)
                      .....+.+|.+.+++|.                           |.+++|+.... .+...+ .+++|+++||+     |
T Consensus         4 ~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~G   54 (356)
T TIGR00901         4 LGLVGNTLPYWLRSKNV---------------------------SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFG   54 (356)
T ss_pred             chhHHhHHHHHHHHcCC---------------------------CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCC
Confidence            34566788999999866                           88999999755 555555 99999999998     8


Q ss_pred             CchH-HHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHH
Q psy17194        134 YDLP-MMIGLCIMFLSTALFACG---RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCL  209 (871)
Q Consensus       134 rr~~-l~~~~~~~~i~~~l~~~a---~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~  209 (871)
                      |||. ++.+.++.++.....++.   .+++.+....++.+++.+...++..+++.|++ |+|+|+++.++...+..+|.+
T Consensus        55 rr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~r~~~~~~~~~~~~~G~~  133 (356)
T TIGR00901        55 RRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEIL-SDEELGYGSTIYIVGYRAGML  133 (356)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhhchHHHHHHHHHHHHHH
Confidence            9887 567788888877777777   46677788888899999999999999999987 678999999999999999999


Q ss_pred             HhHHHHHHHHhhhC--------ChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC-CCCcccchhhhhcchh---HHH
Q psy17194        210 VAPPFGGALYQFAG--------KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP-ESHSTVPIWKLFMDPY---IAV  277 (871)
Q Consensus       210 lg~~l~~~l~~~~g--------wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~  277 (871)
                      +++.+++.+.+..|        ||.+|++.+++.++..+..++..||++++.+++++ +++.....+++++++.   ++.
T Consensus       134 ~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (356)
T TIGR00901       134 LSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALL  213 (356)
T ss_pred             HHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHH
Confidence            99999999998888        99999999988777655555455553321111100 0111123455666664   666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhH-HhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q psy17194        278 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF-FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF  356 (871)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~  356 (871)
                      ..+..++..........+.+.|+++ +|++..+.+.+..... ++.+++.++++++.||+|+|+.+  ..+.++.++...
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l--~~~~~~~~~~~~  290 (356)
T TIGR00901       214 LLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL--LLFGIVQALTNA  290 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHH
Confidence            6666666667777788889999887 8999999998887665 57788999999999999988865  444444444433


Q ss_pred             Hhhcc-----------hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHH
Q psy17194        357 IIPFS-----------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS  413 (871)
Q Consensus       357 ~~~~~-----------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~  413 (871)
                      ...+.           ++.+.+....++.+++.+...+...+...+   ..|+++||+.+|+.++..+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~p~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       291 GFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSK---LSNPKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHH---hcCCCccHHHHHHHHHHHh
Confidence            33221           234555656667788877775555555444   4556999999999877654

>TIGR00881 2A0104 phosphoglycerate transporter family protein

Probab=99.94  E-value=2.9e-25  Score=246.36  Aligned_cols=366  Identities=10%  Similarity=0.032  Sum_probs=249.1

Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      ....+....| ++++++|.+..+.+++.+...++..++.++.|+++||+|||+.+  ..+..+.+++.+++.+.++.+.+
T Consensus        10 ~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~~   86 (379)
T TIGR00881        10 VRKNFALAMP-YLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFL--PIGLILCAIVNLFFGFSTSLWVM   86 (379)
T ss_pred             hHHhhhhhhH-HHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehh--HHHHHHHHHHHHHHHHhhhHHHH
Confidence            3344444445 46777999999999999999999999999999999999999955  67777788888888888899999


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH-HHHHHHHhhhChhhHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP-IVAGGIVDAIGFTALNFLIAFMNILY  446 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp-~l~g~l~~~~g~~~~f~~~~~~~~~~  446 (871)
                      ++.+++.|++.+...+...+...   +..++++|+++.++.+....+|..++| .+.+.+.+..+|++.|++.+++.++.
T Consensus        87 ~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (379)
T TIGR00881        87 AALWALNGIFQGMGWPPCGRTVT---KWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIV  163 (379)
T ss_pred             HHHHHHHHhhccccCCchHHHHH---HhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHH
Confidence            99999999988877554444443   445568999999999999999999999 57777778889999998888766655


Q ss_pred             HHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhh
Q psy17194        447 APVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK  526 (871)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (871)
                      .++.++..+.+++++..++         .++.   ..++   .        +.       +++..+              
T Consensus       164 ~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~---~--------~~-------~~~~~~--------------  199 (379)
T TIGR00881       164 SLICFLLLRDSPQSCGLPP---------AEEM---PNEE---P--------DG-------DAEKKE--------------  199 (379)
T ss_pred             HHHHheeeCCCccccccCc---------cccC---cccc---c--------cc-------cccccc--------------
Confidence            4444333221111000000         0000   0000   0        00       000000              


Q ss_pred             hccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHH
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                                                                              ++....+...++++++|.++...+
T Consensus       200 --------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~  223 (379)
T TIGR00881       200 --------------------------------------------------------EELTKKQIFLQYVLLNKVLWYISL  223 (379)
T ss_pred             --------------------------------------------------------ccccchHHHHHHHHhcchHHHHHH
Confidence                                                                    000000112356788999998888


Q ss_pred             HHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCch-hhHHHHHHHHHHhhHHhhhc
Q psy17194        607 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY-QWLMVAVGLVLEGLCCFIIP  685 (871)
Q Consensus       607 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~-~~~~~~~g~~~~~~~l~~~~  685 (871)
                      ..++.+...+.+..++|.|+++.+|+++.+.++++....++.+++.++.|++.||..++ +.............++..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~  303 (379)
T TIGR00881       224 GYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYW  303 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Confidence            88888888888899999999999999999999999999999999999999999986433 32122222222222222221


Q ss_pred             c--hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHH
Q psy17194        686 F--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN  762 (871)
Q Consensus       686 ~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~  762 (871)
                      .  ..+........+..|+..........   ....+..|++.+|++.|+.++..++|+.+||.+.|.+.|+.||+++|
T Consensus       304 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f  379 (379)
T TIGR00881       304 LNPAANPLMDLICLFALGFLVYGPQMLIG---VIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF  379 (379)
T ss_pred             cCcchhHHHHHHHHHHHHHHHhhhhHHHH---HHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence            1  22333333334444443332222222   23334445889999999999999999999999999999999988653

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.94  E-value=2.5e-23  Score=231.48  Aligned_cols=367  Identities=14%  Similarity=0.093  Sum_probs=261.3

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHH--HHHHHHHHHHhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVL--FASKAIVQLMVN  122 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~~~~  122 (871)
                      +..++..++..++..+...|.+|.+.++.|.                           +.+++|++  .+.+.+...+.+
T Consensus         3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~---------------------------~~~~iGl~~~~~l~~~~~~l~~   55 (390)
T TIGR02718         3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA---------------------------PLTALAFLPLVGLPWVVKFLWA   55 (390)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence            4456667788999999999999999999876                           89999997  467788888899


Q ss_pred             hhhhH-hhhhhCCchHHHHHHHH-HHHHHHHHH---hhhh-HHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        123 PFSGA-LIDRIGYDLPMMIGLCI-MFLSTALFA---CGRS-YGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       123 ~~~G~-l~Dr~Grr~~l~~~~~~-~~i~~~l~~---~a~s-~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      |+++. ..||+||||.+++.+.+ .++.....+   ...+ ...++..-++.++..+...+...++..|.. ++++++..
T Consensus        56 p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~-~~~~~~~~  134 (390)
T TIGR02718        56 PLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHF-NGRTLAKG  134 (390)
T ss_pred             HHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhhhHH
Confidence            99955 79999999987655533 222222222   2222 334455556677778888888888888875 56777888


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHH
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIA  276 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (871)
                      .+....+..+|.++|+.+.+++.+.+|||.+|++.+++.++..+..++..++++++.   +++++...+.++.+|+|.++
T Consensus       135 ~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~  211 (390)
T TIGR02718       135 NAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASP---EAPLARRASLFRFFRRPLAW  211 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcc---ccchhhHHHHHHHHcCcCHH
Confidence            888988889999999999999999999999999999888776666555544432211   11112223466788888887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH-
Q psy17194        277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC-  354 (871)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-  354 (871)
                      ......++..........+.+.|++| .|+++.++|++...... ..+++.++.|++.||+|+|+.+  ..+..+.++. 
T Consensus       212 ~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l--~~~~~~~~~~~  288 (390)
T TIGR02718       212 SLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF--ILGVGLAGSLA  288 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH--HHHHHHHHHHH
Confidence            77777777777777777888888877 69999999998887664 6667789999999999999865  3333322121 


Q ss_pred             HHHhhc-----chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        355 CFIIPF-----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYV-SVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       355 ~~~~~~-----~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~-~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      ......     ..+....+....+.+++.+...+...+....   ..++ +.+|+.+++.+...++|..++|.++|.+.|
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~  365 (390)
T TIGR02718       289 LLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMR---FAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD  365 (390)
T ss_pred             HHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            111111     1222222333333344455543333333322   2333 788999999999999999999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHH
Q psy17194        429 AIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~  448 (871)
                      ..|++..|++.+++.+++..
T Consensus       366 ~~G~~~~f~~~~~~~l~a~~  385 (390)
T TIGR02718       366 RFGYAGGFLSGTVLAVLAIL  385 (390)
T ss_pred             HHccHHHHHHHHHHHHHHHH
Confidence            99999999887776665543

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily

Probab=99.94  E-value=7.9e-24  Score=235.55  Aligned_cols=350  Identities=14%  Similarity=0.157  Sum_probs=249.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh
Q psy17194        279 SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII  358 (871)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~  358 (871)
                      ....+..........+..|. +.+++|.++.+.+++.+.+.++..++.++.|++.||+|||+.+  ..+..+..++.+.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~--~~~~~~~~~~~~~~   87 (385)
T TIGR00710        11 GCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVL--LLGLFIFALSSLGL   87 (385)
T ss_pred             HHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH--HHHHHHHHHHHHHH
Confidence            33334444455555666665 4566899999999999999999999999999999999999965  66777777788888


Q ss_pred             hcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHH
Q psy17194        359 PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFL  438 (871)
Q Consensus       359 ~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~  438 (871)
                      ...++.+.+++.+++.|++.+...+......   .+..|+++|++++++.+....+|..++|.+++.+.+..||++.|++
T Consensus        88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~  164 (385)
T TIGR00710        88 ALSNNIETLLVLRFVQAFGASAGSVISQALV---RDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF  164 (385)
T ss_pred             HHHccHHHHHHHHHHHHcchhHHHHHHHHHH---HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence            7888888888889999998887755444443   4445668999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCc
Q psy17194        439 IAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGT  518 (871)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (871)
                      .+++.++..+..++..++.+++              +  .        ++.     .  +.                   
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~--------------~--~--------~~~-----~--~~-------------------  194 (385)
T TIGR00710       165 LSLAGILLSALIFFILPETLPY--------------E--A--------RIQ-----I--ST-------------------  194 (385)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCC--------------c--c--------cCC-----H--HH-------------------
Confidence            8877666555443322110000              0  0        000     0  00                   


Q ss_pred             CCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccc
Q psy17194        519 NGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD  598 (871)
Q Consensus       519 ~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  598 (871)
                                                                                           ....+++++++
T Consensus       195 ---------------------------------------------------------------------~~~~~~~~~~~  205 (385)
T TIGR00710       195 ---------------------------------------------------------------------YFETFLLLLKS  205 (385)
T ss_pred             ---------------------------------------------------------------------HHHHHHHHHcC
Confidence                                                                                 00013557788


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHh
Q psy17194        599 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  678 (871)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~  678 (871)
                      |+++...+...+....++......|.++++.+|+++.+.|+++....++.+++.++.|++.||+++|+  ....+..+.+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~--~~~~~~~~~~  283 (385)
T TIGR00710       206 KMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS--LLRMGLILFA  283 (385)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHHHHHHH
Confidence            88887777777777777788888899998899999999999999999999999999999999999887  4444554444


Q ss_pred             hHHhhhcch-----hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        679 LCCFIIPFS-----TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       679 ~~l~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      ++..++...     .+...++...+..|++.+...+..   .....|.. +++++++.++++..+..++.+++.+.+.+.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~  359 (385)
T TIGR00710       284 VSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIA---MAYALEDF-PHVAGTASALFGTLRLVLGAIVGYLVSLIH  359 (385)
T ss_pred             HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHH---HHHHhccC-cccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            444333221     122233444555666666554432   33334444 567899999999998876666666677554


Q ss_pred             hhhChH
Q psy17194        754 DAIGFT  759 (871)
Q Consensus       754 ~~~g~~  759 (871)
                      +..++.
T Consensus       360 ~~~~~~  365 (385)
T TIGR00710       360 GNTAWP  365 (385)
T ss_pred             ccChHH
Confidence            444443

This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.94  E-value=3.7e-23  Score=209.70  Aligned_cols=359  Identities=16%  Similarity=0.147  Sum_probs=284.5

Q ss_pred             HHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhh
Q psy17194         53 LLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRI  132 (871)
Q Consensus        53 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~  132 (871)
                      +-..-..+...|+++++.+++|.                           |.+..|+++++..+...+.+|+..+++.|+
T Consensus        22 ~NLR~~itsvgPLL~~Ir~~~gl---------------------------s~s~aGlLTtLPll~fg~~ap~a~~Lar~~   74 (395)
T COG2807          22 FNLRPAITSVGPLLDEIRQDLGL---------------------------SFSVAGLLTTLPLLAFGLFAPAAPRLARRF   74 (395)
T ss_pred             hccchhhhhhhhhHHHHHHHhcc---------------------------cHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            33344456678999999999876                           899999999999999999999999999999


Q ss_pred             CCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhH
Q psy17194        133 GYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAP  212 (871)
Q Consensus       133 Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~  212 (871)
                      |.++.+..++++.+++.++-... +.+.++.+-.+.|.|.+......++++.+.| | ++-+..+|+|....++|..+++
T Consensus        75 g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~F-p-k~~~~mtglYs~sl~~~aaLaa  151 (395)
T COG2807          75 GEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDF-P-KRVGLMTGLYSTSLGAGAALAA  151 (395)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-c-cchhhHHhHHHHHHHHHHHHHh
Confidence            99999999999999999998877 8889999999999999999999999999998 5 6899999999999999999999


Q ss_pred             HHHHHHHhhh-CChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHH
Q psy17194        213 PFGGALYQFA-GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAF  291 (871)
Q Consensus       213 ~l~~~l~~~~-gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (871)
                      .+.-.+.++. |||....+-+.++++..+.++--.  .+++   ..+.+....+..+++|+|..|.+.+.+.+.+..++.
T Consensus       152 ~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~~---~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~  226 (395)
T COG2807         152 ALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA--LREQ---AASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYI  226 (395)
T ss_pred             hhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--cccc---ccccccccccccccccCchhHHHHHHHHhhHHHHHH
Confidence            9999998887 799999998888887655433221  1111   111222223445688999999999999999999999


Q ss_pred             HHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH
Q psy17194        292 LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPI  371 (871)
Q Consensus       292 ~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  371 (871)
                      ...++|.++.| .|+|..+.|.+.+...+..+...+....+.+|...+|.+. .....+..++.+.+.+.+....+.- .
T Consensus       227 ~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~-~~~~~~~l~G~~G~~~~P~~~~~lw-~  303 (395)
T COG2807         227 VIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLV-VLALLLMLVGLVGLLLAPGQLPILW-A  303 (395)
T ss_pred             HHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHH-HHHHHHHHHHHHHHHHhhhhHHHHH-H
Confidence            99999999887 5999999999999999999999999999999876555433 3334444455554444433222221 4


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVL  450 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~  450 (871)
                      ++.|+|.+..++........-.  ..+++.++-.|+.+..+++-.++||.+.|++.|..| |+..+.......++..+..
T Consensus       304 ~llG~G~G~~F~laL~li~~rs--~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G  381 (395)
T COG2807         304 LLLGLGQGGAFPLALTLILLRS--SDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG  381 (395)
T ss_pred             HHHhCccchHHHHHHHHHHhhc--CChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence            7788888877555444443322  235677888999999999999999999999999987 8888777766665555444


Q ss_pred             H
Q psy17194        451 I  451 (871)
Q Consensus       451 ~  451 (871)
                      +
T Consensus       382 l  382 (395)
T COG2807         382 L  382 (395)
T ss_pred             h
Confidence            4

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.94  E-value=3.6e-23  Score=213.30  Aligned_cols=369  Identities=17%  Similarity=0.211  Sum_probs=284.8

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      +..+..+...+++-++......+++|.+.+.|++                           +..|.+++..+++.++.++
T Consensus        12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~l---------------------------s~~~a~liqfaff~gYf~~   64 (422)
T COG0738          12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDL---------------------------TYFEASLIQFAFFGGYFIM   64 (422)
T ss_pred             eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCc---------------------------cHHHHHHHHHHHHHHHHHH
Confidence            4455556666677778888888999999999866                           9999999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFA---CGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALG  198 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~---~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g  198 (871)
                      +++.|++.+|+|+|+-++.|+.++++++.++.   ...++..++++-++.|.|.+...+++..++..+- +++.-.+.++
T Consensus        65 ~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg-~~~~a~~rln  143 (422)
T COG0738          65 SLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG-KPESAAFRLN  143 (422)
T ss_pred             hccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC-CchhHHHHHH
Confidence            99999999999999999999999999999985   4578899999999999999999999999999986 5568889999


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhh-------------------hCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC
Q psy17194        199 IALAFISFGCLVAPPFGGALYQF-------------------AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE  259 (871)
Q Consensus       199 ~~~~~~~~G~~lg~~l~~~l~~~-------------------~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~  259 (871)
                      +.+..+++|.++||++++.+..+                   -.||.+|...+...++..+.......+ ..+..+++..
T Consensus       144 l~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p-~~~~~~~~~~  222 (422)
T COG0738         144 LAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLP-DLQVAAPSLG  222 (422)
T ss_pred             HHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCC-cCCccccccc
Confidence            99999999999999999998762                   138899998888777665554443312 1111111111


Q ss_pred             CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCch
Q psy17194        260 SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY  339 (871)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~  339 (871)
                      +.......+++++|.++...+..++.........++++.|+.+..|.+..+.....+.+..+.++|++++.++.+|+...
T Consensus       223 ~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~  302 (422)
T COG0738         223 ASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE  302 (422)
T ss_pred             ccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence            11112567899999999999999999999999999999999988899999999999999999999999999999999988


Q ss_pred             hHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy17194        340 QWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  419 (871)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~ig  419 (871)
                      |.+  ........+.++...+.++...+ ...++.|+..+..+|...+...+..+    ++.. ..|..-.+..+|+++-
T Consensus       303 k~L--af~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~----~~ts-~~s~~l~maivGGAii  374 (422)
T COG0738         303 KYL--AFYALIAILLLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG----EHTS-VGSGLLVMAIVGGAII  374 (422)
T ss_pred             HHH--HHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC----cccc-ccceeeeeheecchHH
Confidence            855  33333333334444455554433 34566777777776666665544433    2222 2223334556899999


Q ss_pred             HHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        420 PIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       420 p~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      |++.|++.|..|-...+.....++.+.+
T Consensus       375 P~l~G~i~d~~g~~~~~~~~pllc~lyV  402 (422)
T COG0738         375 PPLQGVIADMFGIQLTFLIVPLLCYLYV  402 (422)
T ss_pred             HHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            9999999999998888775554444443

>PRK12307 putative sialic acid transporter; Provisional

Probab=99.94  E-value=7.7e-24  Score=238.94  Aligned_cols=369  Identities=14%  Similarity=0.074  Sum_probs=242.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      +.......+...+.........| .+++++|.++.+.++..+.+.++..++.++.|+++||+|||+.+  ..+..+.+++
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l--~~~~~~~~~~   96 (426)
T PRK12307         20 LFSAWLGYVFDGFDFMLIFYIMY-LIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLM--MWSIVAYSVG   96 (426)
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHHHH
Confidence            33444444444444444444444 46677999999999999999999999999999999999999955  7777888888


Q ss_pred             HHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhh
Q psy17194        355 CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTA  434 (871)
Q Consensus       355 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~  434 (871)
                      .+..++.++.+.+++.+++.|++.+...+.....   +.+.+|+++|+++.++...+..+|..+++.+.+.+.+..||++
T Consensus        97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~  173 (426)
T PRK12307         97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTY---AVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRA  173 (426)
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHH---HHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHH
Confidence            8888888999999999999999988764444333   4455666899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccc
Q psy17194        435 LNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       435 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      .|++.....++    .++.+...++++   +.++...+           ++.++.        +.               
T Consensus       174 ~f~i~~~~~~~----~~~~~~~~p~~~---~~~~~~~~-----------~~~~~~--------~~---------------  212 (426)
T PRK12307        174 AFFVGLLPVLL----VIYIRARAPESK---EWEEAKLS-----------GKGKHS--------QS---------------  212 (426)
T ss_pred             HHHHHHHHHHH----HHHHHHHCCCCh---HHHHhhhh-----------cccccc--------cc---------------
Confidence            99875432222    112221111000   00000000           000000        00               


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  594 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  594 (871)
                           .+                                                                .....++++
T Consensus       213 -----~~----------------------------------------------------------------~~~~~~~~~  223 (426)
T PRK12307        213 -----AW----------------------------------------------------------------SVFSLSMKG  223 (426)
T ss_pred             -----ch----------------------------------------------------------------hhhhHHHHH
Confidence                 00                                                                000012356


Q ss_pred             hccchhHHHHHHH---HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        595 LFMDPYIAVCSGA---LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       595 l~~~~~~~~~~~~---~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      ++++|.+......   .++.+...+....++|.|+++ .|+++.+.+.++....++.+++.++.|++.||+++|+  ...
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--~~~  300 (426)
T PRK12307        224 LFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK--TFS  300 (426)
T ss_pred             HHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHH
Confidence            6777776543322   222223333456788999866 5999999999999999999999999999999999877  445


Q ss_pred             HHHHHHhhHHhhhcc-h-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhH
Q psy17194        672 VGLVLEGLCCFIIPF-S-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  749 (871)
Q Consensus       672 ~g~~~~~~~l~~~~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~  749 (871)
                      .+..+.++.++.+.. . .+...+....++.+++.........   ....|..|++.+|++.|+.+...++|+.+||.+.
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~  377 (426)
T PRK12307        301 IGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP---KFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAA  377 (426)
T ss_pred             HHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH---HHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHH
Confidence            555554444333322 1 1122122222222222111111111   2234555588899999999999999999999999


Q ss_pred             HHhHhhhChHHHHHHH
Q psy17194        750 GGIVDAIGFTALNFLI  765 (871)
Q Consensus       750 g~l~~~~g~~~~~~~~  765 (871)
                      |++.++.|+....++.
T Consensus       378 g~l~~~~g~~~~~~~~  393 (426)
T PRK12307        378 TWLGITMGLGAALTFI  393 (426)
T ss_pred             HHHHHcccHHHHHHHH
Confidence            9999999977654433

>PRK10473 multidrug efflux system protein MdtL; Provisional

Probab=99.94  E-value=2e-23  Score=232.61  Aligned_cols=363  Identities=9%  Similarity=0.052  Sum_probs=243.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      |.+.......+....+.......+|.+ .+++|.+..+.++..+.+.++..++.++.|+++||+|||+.+  ..+..+..
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l--~~~~~~~~   79 (392)
T PRK10473          3 RFLLCSFALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVA--IPGAALFI   79 (392)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHH--HHHHHHHH
Confidence            344444555555555555666666664 556899999999999999999999999999999999999955  66777777


Q ss_pred             HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        353 LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       353 ~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                      ++.+.+...++.+.+++.+++.|++.+...+.....   +.+..++++|+++.++.+....++..++|.+++.+.+..||
T Consensus        80 i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~---i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~  156 (392)
T PRK10473         80 IASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAI---LRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPW  156 (392)
T ss_pred             HHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHH---HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCh
Confidence            887777778888888888888888887764433333   44445669999999999999999999999999999888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCc
Q psy17194        433 TALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      ++.|++.+++.++..++.+...++++++               + .+    +   +  .      +.             
T Consensus       157 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~-~~----~---~--~------~~-------------  192 (392)
T PRK10473        157 QSLFYTMAAMGILVLLLSLFILKETRPA---------------R-AP----A---A--S------SK-------------  192 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCCCc---------------c-cC----C---c--c------ch-------------
Confidence            9999998877666554443322211000               0 00    0   0  0      00             


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                                                                                                  ....
T Consensus       193 ----------------------------------------------------------------------------~~~~  196 (392)
T PRK10473        193 ----------------------------------------------------------------------------PREN  196 (392)
T ss_pred             ----------------------------------------------------------------------------HHHH
Confidence                                                                                        0001


Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHH
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  672 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~  672 (871)
                      ++.+++|+++...+...+.......+..+.|.++++.+|+++.+.|+++...+++.+++.++.+++.||+++|+  ....
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~--~~~~  274 (392)
T PRK10473        197 SESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT--LMLT  274 (392)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHH
Confidence            34566777665555544444445555666788888889999999999999999999999999999999999887  5556


Q ss_pred             HHHHHhhHHhhhcchhhhHHHHH--HHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        673 GLVLEGLCCFIIPFSTSYQMLML--PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       673 g~~~~~~~l~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      +..+..++.+.+....+.+..+.  .++..|++.+.  ...   .....+.. +++.    |..+....++..+|+.+++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~--~~~---~~~~~~~~-~~~~----g~~~~~~~~~~~~g~~~~~  344 (392)
T PRK10473        275 SQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGF--GVA---MSQALGPF-SLRA----GVASSTLGIAQVCGSSLWI  344 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--HHH---HHHHhccC-cccc----cHHHHHHHHHHHHHHHHHH
Confidence            66555555555444333333233  33333333332  211   11112211 2222    4444556678888888888


Q ss_pred             HhHhhhChHHHHHHHHHHHHHHH
Q psy17194        751 GIVDAIGFTALNFLIAFMNILYA  773 (871)
Q Consensus       751 ~l~~~~g~~~~~~~~a~~~~~~~  773 (871)
                      ++.+..|+.....+.+.+.+...
T Consensus       345 ~l~~~~g~~~~~~~~~~~~~~~~  367 (392)
T PRK10473        345 WLAAVLGISAWNMLIGILIACSI  367 (392)
T ss_pred             HHHHHhccchhHHHHHHHHHHHH
Confidence            88888888765555554443333

>TIGR01299 synapt_SV2 synaptic vesicle protein SV2

Probab=99.94  E-value=7.9e-24  Score=245.91  Aligned_cols=408  Identities=13%  Similarity=0.081  Sum_probs=253.7

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFG  377 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g  377 (871)
                      ..+.++++.+..+.+++.+.+.++.+++.+++|+++||+|||+.+  ..++++.+++.++++++++.+.+++.+++.|++
T Consensus       191 p~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~l--ii~lil~~i~~ll~afa~s~~~llv~R~l~G~g  268 (742)
T TIGR01299       191 PSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCL--LICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFG  268 (742)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            345667899999999999999999999999999999999999965  667777777777778888999999999999999


Q ss_pred             HhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-------------ChhhHHHHHHHHHH
Q psy17194        378 MALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-------------GFTALNFLIAFMNI  444 (871)
Q Consensus       378 ~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-------------g~~~~f~~~~~~~~  444 (871)
                      .+...+.....   +.+..|++.||+.+++.++...+|.++++.++..+...+             +||+.+++.++..+
T Consensus       269 ~g~~~p~~~~~---isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~l  345 (742)
T TIGR01299       269 IGGAIPIVFSY---FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCV  345 (742)
T ss_pred             HHHHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHH
Confidence            99875444444   445556699999999999999999999999887776543             57888887777666


Q ss_pred             HHHHHHHHHhhcccCC---CCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCC-cCcccccCc-C
Q psy17194        445 LYAPVLIYLKNIYDFK---PFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDEN-KQPAANVGT-N  519 (871)
Q Consensus       445 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~  519 (871)
                      +.+++.+++++..+..   .+.++.....+.......   ............ +..+.   +...++. +.+...... .
T Consensus       346 l~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~---~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~  418 (742)
T TIGR01299       346 FAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNM---RAKGHPEKVFSV-NHIKT---IHQEDELIEIESDTGTWYQ  418 (742)
T ss_pred             HHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCC---CCcCchhHHHHH-HHHHH---hhhhhhhhcccccccchhh
Confidence            6655555555543221   111111110000000000   000000000000 00000   0000000 000000000 0


Q ss_pred             CCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccch
Q psy17194        520 GVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDP  599 (871)
Q Consensus       520 ~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  599 (871)
                      +...+.                                                        .......+.+++.+|+.+
T Consensus       419 ~~~~~~--------------------------------------------------------~~~~~~~~~~~~~lf~~~  442 (742)
T TIGR01299       419 RCFVRA--------------------------------------------------------LSEGGGIWGNFLRCFNPE  442 (742)
T ss_pred             cchhhh--------------------------------------------------------hhhhhhHHHHHHHHcCcc
Confidence            000000                                                        000000011234455443


Q ss_pred             ---hHHHHHHHHHHHHHHHHHhhhcHHHHHHHh----c-----------------CCCcc--------------------
Q psy17194        600 ---YIAVCSGALLMANVALAFLEPTISLWIEDN----L-----------------TTDNW--------------------  635 (871)
Q Consensus       600 ---~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~----~-----------------g~s~~--------------------  635 (871)
                         +.+...+..++..+++|++..|+|.++++.    +                 +++..                    
T Consensus       443 ~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  522 (742)
T TIGR01299       443 VREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFK  522 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhccccc
Confidence               334555677778888999999999876441    0                 00000                    


Q ss_pred             -------------------------------------------------------------------------chhhhhh
Q psy17194        636 -------------------------------------------------------------------------KIGMIWL  642 (871)
Q Consensus       636 -------------------------------------------------------------------------~~gl~~~  642 (871)
                                                                                               ...+..+
T Consensus       523 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~  602 (742)
T TIGR01299       523 SVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNF  602 (742)
T ss_pred             ccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHH
Confidence                                                                                     1123345


Q ss_pred             ccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc
Q psy17194        643 PAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR  722 (871)
Q Consensus       643 ~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  722 (871)
                      ...++.+++.++.|+++||+|||+  ++.+++++.+++++++++..+...+++..++++++.+...+   ....+..+.+
T Consensus       603 l~~l~~i~G~il~g~L~Dr~GRr~--~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~---~~~a~~aEl~  677 (742)
T TIGR01299       603 LGTLAVLPGNIVSALLMDKIGRLR--MLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWN---ALDVLTVELY  677 (742)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHc
Confidence            566888899999999999999988  66778888888877776655544444444444554443333   3445556667


Q ss_pred             cccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        723 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       723 ~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      |++.|++++|+.+....+|+++||.++|.+.+. +....|.+.+++.++++++.+++
T Consensus       678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L  733 (742)
T TIGR01299       678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL  733 (742)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC
Confidence            788999999999999999999999999988874 45566777777766666555544

This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.

>TIGR00891 2A0112 putative sialic acid transporter

Probab=99.93  E-value=6.5e-24  Score=237.98  Aligned_cols=380  Identities=12%  Similarity=0.047  Sum_probs=244.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ....+..+...+.........+. +++++|.+..+.+++.+...++..++.++.|+++||+|||+.+  ..+..+.+++.
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~--~~~~~~~~~~~   91 (405)
T TIGR00891        15 SAAWLGWLLDAFDFFLVALVLAE-VAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPM--VTSIVLFSAGT   91 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHHHHHH
Confidence            44445555555555555555554 5677999999999999999999999999999999999999965  66777777788


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--hh
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--FT  433 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--~~  433 (871)
                      +.+.+.++++.+++.+++.|++.+...+.....   +.+..++++|++++++.+....+|..+++.+.+.+.+..+  |+
T Consensus        92 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~  168 (405)
T TIGR00891        92 LACGFAPGYITMFIARLVIGIGMGGEYGSSAAY---VIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWR  168 (405)
T ss_pred             HHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHH---HHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHH
Confidence            888888899999999999999988775444444   4445566999999999999999999999999999988876  99


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPA  513 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (871)
                      +.|++.++..++........++.    +..+++++.    ++.            ..+..++..+.   +     + ...
T Consensus       169 ~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~------------~~~~~~~~~~~---~-----~-~~~  219 (405)
T TIGR00891       169 ALFFISILPIIFALWLRKNIPEA----EDWKEKHAG----KAL------------VRTMVDILYGG---E-----H-RIA  219 (405)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCC----hhHHHHhhh----hhh------------hhhHHHHHhcc---c-----h-hhh
Confidence            99887654444333222211110    000000000    000            00000000000   0     0 000


Q ss_pred             cccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh
Q psy17194        514 ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW  593 (871)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  593 (871)
                      ...                                                        +             ....+.+
T Consensus       220 ~~~--------------------------------------------------------~-------------~~~~~~~  230 (405)
T TIGR00891       220 NIV--------------------------------------------------------M-------------TLAAAMV  230 (405)
T ss_pred             hhh--------------------------------------------------------h-------------hhhHHhh
Confidence            000                                                        0             0000000


Q ss_pred             hh-ccc-hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        594 KL-FMD-PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       594 ~l-~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      +. .++ +.+........+.+........++|.|+++.+|++..+.|++.....++.+++.++.|++.||+++|+  ...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~--~~~  308 (405)
T TIGR00891       231 QSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK--AYV  308 (405)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh--hhH
Confidence            00 011 11222233333344444566678899998889999999999999999999999999999999999887  333


Q ss_pred             HHHHHHhhH-HhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        672 VGLVLEGLC-CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       672 ~g~~~~~~~-l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      .+..+.++. +..+....+.+.+.+.++..++..+...+......+   +..|++++|+++|+.+...++|+.+||.+.|
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g  385 (405)
T TIGR00891       309 CSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLG---EYFPTDQRAAGLGFTYQLGNLGGALAPIIGA  385 (405)
T ss_pred             HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHh---hhCCcchhHHHhhHHHHHHHHHHHHHHHHHH
Confidence            444433222 222222333343333434444433333333333333   4445889999999999999999999999999


Q ss_pred             HhHhhhC-hHHHHHH
Q psy17194        751 GIVDAIG-FTALNFL  764 (871)
Q Consensus       751 ~l~~~~g-~~~~~~~  764 (871)
                      .+.|+.| |+.++..
T Consensus       386 ~l~~~~g~~~~~~~~  400 (405)
T TIGR00891       386 LLAQRLDEYGTALAS  400 (405)
T ss_pred             HHHHhccccchhHHh
Confidence            9999999 7766554

>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily

Probab=99.93  E-value=3.3e-23  Score=233.20  Aligned_cols=383  Identities=15%  Similarity=0.179  Sum_probs=288.3

Q ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHH
Q psy17194        267 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  346 (871)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~  346 (871)
                      +..+|+|.+..+.....+.+++........+-++.+ ..-|+..++++.....+..++..+++|.++||+.|||+++  .
T Consensus         4 ~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili--~   80 (524)
T PF05977_consen    4 FAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI--L   80 (524)
T ss_pred             cccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH--H
Confidence            456889999999999999888888777777765554 4668999999999999999999999999999999999663  3


Q ss_pred             HHHHHHHHHH-----HhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHH
Q psy17194        347 GLVLEGLCCF-----IIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  421 (871)
Q Consensus       347 ~~~~~~~~~~-----~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~  421 (871)
                      +-.+.++..+     ...-..+.+.+++..++.+++.++..|...+.+.+++++   ++...++++.+...++...+||.
T Consensus        81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~---~~L~~A~al~s~~~niar~iGPa  157 (524)
T PF05977_consen   81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPK---EDLPAANALNSISFNIARIIGPA  157 (524)
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---hhHHHHHHHHHHHHHHHHhccch
Confidence            3222222111     111224677788888889999999888888887777665   88899999999999999999999


Q ss_pred             HHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccc
Q psy17194        422 VAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSM  501 (871)
Q Consensus       422 l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (871)
                      ++|.++...|..+.|.+.++..++.+.+....++...+++           .+               +++...+.    
T Consensus       158 lgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~~-----------~~---------------~e~~~~~l----  207 (524)
T PF05977_consen  158 LGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPSS-----------LP---------------RERFFSAL----  207 (524)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc-----------cc---------------hhhhhhhH----
Confidence            9999999999999999888776665444333222100000           00               00000000    


Q ss_pred             cccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhcc
Q psy17194        502 QETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ  581 (871)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  581 (871)
                                                                                                      
T Consensus       208 --------------------------------------------------------------------------------  207 (524)
T PF05977_consen  208 --------------------------------------------------------------------------------  207 (524)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhc
Q psy17194        582 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL  661 (871)
Q Consensus       582 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~  661 (871)
                             +..++.+.++|.+....+..++.+.....+...+|.+.++.+|.++...|+++...++|.++|+++.+++.+|
T Consensus       208 -------~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~  280 (524)
T PF05977_consen  208 -------REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRR  280 (524)
T ss_pred             -------HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence                   0012334455665555444455555555556678999999999999999999999999999999999999999


Q ss_pred             cCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHH
Q psy17194        662 YPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA  741 (871)
Q Consensus       662 ~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g  741 (871)
                      +++++  .+..+.++.+++++.+++..+.+..++.+++.|++.........+..+..++   ++.+|.+++++++....+
T Consensus       281 ~~~~~--lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P---~~~~GRv~si~~~~~~g~  355 (524)
T PF05977_consen  281 LSSRR--LVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVP---DWVRGRVFSIYQMVFFGG  355 (524)
T ss_pred             cCcch--hhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HHHHhHHHHHHHHHHHHH
Confidence            88877  5667777888888888888888877777777788777766666666666666   889999999999999999


Q ss_pred             HhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHH
Q psy17194        742 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLI  777 (871)
Q Consensus       742 ~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~  777 (871)
                      ..+|..+.|.+.+.+|.+.++.+.++..++...+.+
T Consensus       356 ~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~  391 (524)
T PF05977_consen  356 MPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL  391 (524)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998877766655555443

EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].

>KOG2615|consensus

Probab=99.93  E-value=9.4e-25  Score=221.15  Aligned_cols=359  Identities=21%  Similarity=0.211  Sum_probs=245.8

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      +.++.++..++.+..+.+.+..-.+.++|+....+++                   +.+....|.+.+.|++.+.+.++.
T Consensus        27 v~vv~~~~ll~l~~~~~L~~~~~~~V~~F~~a~~~~~-------------------~~~~~yaGflGSsF~ilQ~~sS~~   87 (451)
T KOG2615|consen   27 VAVVSLSLLLPLLLVSSLYPFVVFMVRDFNIAIGEPD-------------------GASVFYAGFLGSSFSILQFISSPL   87 (451)
T ss_pred             eeeeehhhhhhHhhccchhHHHHHhhHHHHHhhCCcc-------------------cccchhhhhHhhHHHHHHHHhhhh
Confidence            3444555555555556666777778888876433332                   457889999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHH
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFI  204 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~  204 (871)
                      +|.++||+|||+++++|++..++...+.++++|+..+.+.|++.|+..|...+. .++++|.+ ++|+|+++++.+..+.
T Consensus        88 ~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rAiisdV~-sek~r~l~ms~v~~a~  165 (451)
T KOG2615|consen   88 WGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RAIISDVV-SEKYRPLGMSLVGTAF  165 (451)
T ss_pred             hhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HHHHHhhc-Chhhccceeeeeehhh
Confidence            999999999999999999999999999999999977777799999999977555 89999997 5589999999999999


Q ss_pred             HHHHHHhHHHHHHHHh---hhCChhHHHH----HHHHHHHHHHHHHHhcccchhhhccCCCCC---------Ccccc---
Q psy17194        205 SFGCLVAPPFGGALYQ---FAGKEIPFLI----LAFVSLLDGFMLLLVMKPVKEQLNQKKPES---------HSTVP---  265 (871)
Q Consensus       205 ~~G~~lg~~l~~~l~~---~~gwr~~f~~----~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~---------~~~~~---  265 (871)
                      ++|.++||.+||++.+   ..| +.+|..    ..+..........++.||+-+.++++++..         .....   
T Consensus       166 ~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~~~~~~~~~  244 (451)
T KOG2615|consen  166 GLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADDRLALLKFAR  244 (451)
T ss_pred             hcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccchhhhhhhhhhhcchhh
Confidence            9999999999999988   223 223333    222222212223344555432222110000         00000   


Q ss_pred             --hhhhhcchhHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc
Q psy17194        266 --IWKLFMDPYIAV-------CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY  336 (871)
Q Consensus       266 --~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~  336 (871)
                        ....+||+....       +....++....+.....+...+..+.+|.++.+.|-+++..++.+.+.+....+..+|.
T Consensus       245 ~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~  324 (451)
T KOG2615|consen  245 IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRY  324 (451)
T ss_pred             hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhcccccccc
Confidence              112334432221       22223333333333333444444566899999999999888888888888877888877


Q ss_pred             C--chhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q psy17194        337 P--TYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  414 (871)
Q Consensus       337 g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l  414 (871)
                      .  .+-.+  ..++.++.-..++.........+.....+..+..+...+....+....   .|+++||+++|+..+.+.+
T Consensus       325 ~~~~~a~l--~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~---~~~~qrG~~~Gi~~Sl~al  399 (451)
T KOG2615|consen  325 KGNIKAVL--LFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHKY---GPQSQRGTLNGIFRSLGAL  399 (451)
T ss_pred             ccchhhHH--HHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHhc---CCcccchHHHHHHHHHHHH
Confidence            5  33322  344444444455566666667777777777777666644444443332   4669999999999999999


Q ss_pred             HHHHHHHHHHHHHhhh
Q psy17194        415 AYAIGPIVAGGIVDAI  430 (871)
Q Consensus       415 g~~igp~l~g~l~~~~  430 (871)
                      +.++||.+.|.+..+.
T Consensus       400 aRaiGPlv~g~i~~Ws  415 (451)
T KOG2615|consen  400 ARAIGPLVSGVIFSWS  415 (451)
T ss_pred             HHHhhhhhhheeEEEe
Confidence            9999999999887764

>PRK11128 putative 3-phenylpropionic acid transporter; Provisional

Probab=99.93  E-value=2.4e-23  Score=230.79  Aligned_cols=357  Identities=13%  Similarity=0.117  Sum_probs=251.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHH--HHHHHHHHHHHHHHHhh
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWL--MVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--~~~~~~~~~~~~~~~~~  359 (871)
                      ++....+...+.+++|.|+++ +|.|..++|++.+.+.+...+++++.|++.||+||++..  .......+  .......
T Consensus        13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~--~~~~~~~   89 (382)
T PRK11128         13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL--FAVAFWF   89 (382)
T ss_pred             HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH--HHHHHHH
Confidence            455556678888999999866 799999999999999999999999999999999984211  11111111  1222333


Q ss_pred             cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH
Q psy17194        360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  439 (871)
Q Consensus       360 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~  439 (871)
                      ..++.+.+++.+.+.+++.+...+.......+.     .++|+++.+.......+|.++||.+++.+.+++||+..|++.
T Consensus        90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-----~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~  164 (382)
T PRK11128         90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-----QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWIL  164 (382)
T ss_pred             hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-----HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence            457788887778878887766544333332221     356788888888888999999999999999999999999877


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcC
Q psy17194        440 AFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTN  519 (871)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (871)
                      ++..++.++... ..+  +.++   +         ++ .     +++ .      +                        
T Consensus       165 ~~~~~~~~~~~~-~~~--~~~~---~---------~~-~-----~~~-~------~------------------------  192 (382)
T PRK11128        165 TAGVASMLLGQL-LRP--TIMP---Q---------GE-S-----RQQ-E------S------------------------  192 (382)
T ss_pred             HHHHHHHHHHHH-ccC--CCCC---c---------cc-c-----ccc-c------c------------------------
Confidence            754443332221 111  0000   0         00 0     000 0      0                        


Q ss_pred             CCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccch
Q psy17194        520 GVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDP  599 (871)
Q Consensus       520 ~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  599 (871)
                                                                                         +....+++++|+|
T Consensus       193 -------------------------------------------------------------------~~~~~~~~i~~~~  205 (382)
T PRK11128        193 -------------------------------------------------------------------AGWPAWKALLKEP  205 (382)
T ss_pred             -------------------------------------------------------------------cccchHHHHHcCh
Confidence                                                                               0001246789999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhh
Q psy17194        600 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  679 (871)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~  679 (871)
                      +++...+..++.....+.....+|.|+++ .|++..+.|+++....++.++..++.|++.||+++++  .+..++...++
T Consensus       206 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~--~l~~~~~~~~~  282 (382)
T PRK11128        206 TVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD--LLLLSAICGVV  282 (382)
T ss_pred             hHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH--HHHHHHHHHHH
Confidence            99988777777777777777888999855 8999999999999888888889999999999999888  56677777777


Q ss_pred             HHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHH-HHHHHHHhHhhhhHHHhHhhhCh
Q psy17194        680 CCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGIVDAIGF  758 (871)
Q Consensus       680 ~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~-~~~~~g~~~gp~~~g~l~~~~g~  758 (871)
                      +.+.+.+.++.+.+++..++.|++.+...+..+...    +..++++++++.++++ ....+|..+||.++|.+.|++|+
T Consensus       283 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~  358 (382)
T PRK11128        283 RWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYI----AARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA  358 (382)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----HHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence            777777777777777777777777776544333332    2233566688899887 55677889999999999999987


Q ss_pred             HHHHHHHHHHHHHHH
Q psy17194        759 TALNFLIAFMNILYA  773 (871)
Q Consensus       759 ~~~~~~~a~~~~~~~  773 (871)
                       ..++..+++.+++.
T Consensus       359 -~~~~~~~~~~~~~~  372 (382)
T PRK11128        359 -GVFWVMALVALPAL  372 (382)
T ss_pred             -HHHHHHHHHHHHHH
Confidence             46666666555443

>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter

Probab=99.93  E-value=2.1e-24  Score=246.13  Aligned_cols=364  Identities=13%  Similarity=0.138  Sum_probs=249.1

Q ss_pred             hhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc--hhhHHHHHHHHHHHHHHhh
Q psy17194        303 NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS--TSYQMLMLPICGICFGMAL  380 (871)
Q Consensus       303 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~l~g~g~~~  380 (871)
                      +++++..+.|++.+.+.+++.+++++.|+++||+|+|+.+  ..+.++.+++.+++.+.  .+.+.+++.+++.|++.+.
T Consensus        70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~  147 (465)
T TIGR00894        70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSI--GIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGS  147 (465)
T ss_pred             CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhh--HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhccc
Confidence            5789999999999999999999999999999999999955  56666666666555433  4466778888999999888


Q ss_pred             hhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-ChhhHHHHHHHHHHHHHHHHHHHhhcccC
Q psy17194        381 VDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-GFTALNFLIAFMNILYAPVLIYLKNIYDF  459 (871)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~  459 (871)
                      ..+.....   +.+.+|+++|++++++.+.+..+|.+++|.+.+.+.+.. ||++.|++.++..++..++++...+...+
T Consensus       148 ~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~  224 (465)
T TIGR00894       148 VSPATHKI---IVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPS  224 (465)
T ss_pred             chhhHHHH---HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence            74443333   444556699999999999999999999999999999984 99999999888777666555544331110


Q ss_pred             CCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccc
Q psy17194        460 KPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPP  539 (871)
Q Consensus       460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  539 (871)
                      ...+.+                 .++.    +..++..+.                                        
T Consensus       225 ~~~~~~-----------------~~~~----~~i~~~~~~----------------------------------------  243 (465)
T TIGR00894       225 IHPCIS-----------------KFEK----KYINSSLQG----------------------------------------  243 (465)
T ss_pred             cCCCCC-----------------HHHH----HHHHhhccc----------------------------------------
Confidence            000000                 0000    000000000                                        


Q ss_pred             hhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhh
Q psy17194        540 FGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLE  619 (871)
Q Consensus       540 ~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  619 (871)
                                                                ++...+.+.++++++++|.++...+..++.+..++.+.
T Consensus       244 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (465)
T TIGR00894       244 ------------------------------------------QKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILP  281 (465)
T ss_pred             ------------------------------------------ccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence                                                      00000011246889999999999999999999999999


Q ss_pred             hcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh--------HHHHHHHHHHhhHHhhhcc-hhhh
Q psy17194        620 PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW--------LMVAVGLVLEGLCCFIIPF-STSY  690 (871)
Q Consensus       620 ~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~--------~~~~~g~~~~~~~l~~~~~-~~~~  690 (871)
                      +++|.|+++.+|++..+.|++...+.++.+++.++.|+++||..+|+.        ....+++...++.++.... ..+.
T Consensus       282 ~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (465)
T TIGR00894       282 TYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAF  361 (465)
T ss_pred             HHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence            999999999999999999999999999999999999999998764421        1111222222222222222 2223


Q ss_pred             HHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhh---ChHHHHHHHHH
Q psy17194        691 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI---GFTALNFLIAF  767 (871)
Q Consensus       691 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~---g~~~~~~~~a~  767 (871)
                      ...++.+...+.+.+...+...   ....|.. ++..|.+.|+.|+...+|+.++|.+.|.+.+..   +|..+|.+.++
T Consensus       362 ~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~-~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~  437 (465)
T TIGR00894       362 YLTIIILTLANAVSSGPLAGVL---INSLDLA-PRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAF  437 (465)
T ss_pred             HHHHHHHHHHHHHhhhhhhhhh---hchhhcC-hhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHH
Confidence            3333333333333333222221   1222333 568999999999999999999999999988753   37888888887


Q ss_pred             HHHHHHHHHHH
Q psy17194        768 MNILYAPVLIY  778 (871)
Q Consensus       768 ~~~~~~~~~~~  778 (871)
                      +.+++..+...
T Consensus       438 ~~~i~~i~~~~  448 (465)
T TIGR00894       438 VNILCVIFYLI  448 (465)
T ss_pred             HHHHHHHHeee
Confidence            77777655443

>PRK11043 putative transporter; Provisional

Probab=99.93  E-value=6e-23  Score=229.54  Aligned_cols=337  Identities=13%  Similarity=0.128  Sum_probs=236.6

Q ss_pred             HHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHH
Q psy17194        290 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLML  369 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  369 (871)
                      ..+.+.+|. +++++|.++.+.++..+.+.++..++.++.|+++||+|||+.+  ..+..+..++.+.+.+.++.+.+++
T Consensus        23 ~~~~p~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~l~~   99 (401)
T PRK11043         23 DMYLPAFKA-IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVL--LAGLSLFALGSLGMLWVESAAQLLV   99 (401)
T ss_pred             HHHHhhHHH-HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHH--HHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            333344443 5677899999999999999999999999999999999999955  6667777777777778888888888


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHH
Q psy17194        370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPV  449 (871)
Q Consensus       370 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~  449 (871)
                      .+++.|++.+...+...   ....+.+++++++++.+..+....++..++|.+++.+.+..||++.|++.+++.++..++
T Consensus       100 ~~~l~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~  176 (401)
T PRK11043        100 LRFVQAVGVCSAAVIWQ---ALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP  176 (401)
T ss_pred             HHHHHHhhhHHHHHHHH---HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence            88888888776533322   334455666888899999988899999999999999999999999999887776665544


Q ss_pred             HHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhcc
Q psy17194        450 LIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASA  529 (871)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  529 (871)
                      .++.++..++               ++         .++         +                               
T Consensus       177 ~~~~~~~~~~---------------~~---------~~~---------~-------------------------------  192 (401)
T PRK11043        177 TLRLKPSKKA---------------RK---------QSQ---------D-------------------------------  192 (401)
T ss_pred             HHHcCCCCCc---------------cc---------cch---------H-------------------------------
Confidence            4333221000               00         000         0                               


Q ss_pred             ccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHH
Q psy17194        530 PSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL  609 (871)
Q Consensus       530 ~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  609 (871)
                                                                                 +.++++++++|.++...+...
T Consensus       193 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~  213 (401)
T PRK11043        193 -----------------------------------------------------------ALTFKQLLKSKTYLGNVLIFA  213 (401)
T ss_pred             -----------------------------------------------------------HHHHHHHHcChhHHHHHHHHH
Confidence                                                                       001355677777766555555


Q ss_pred             HHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhh---HHhhhcc
Q psy17194        610 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL---CCFIIPF  686 (871)
Q Consensus       610 ~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~---~l~~~~~  686 (871)
                      +....++.+..+.|.++++ +|+++.+.|+.+.+..++.+++....+++.||++++|..  ..+....++   .+.....
T Consensus       214 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~  290 (401)
T PRK11043        214 ACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASL  290 (401)
T ss_pred             HHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence            5555666667788988854 799999999999888899999999999999999987732  222222222   2222221


Q ss_pred             --hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHH
Q psy17194        687 --STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN  762 (871)
Q Consensus       687 --~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~  762 (871)
                        ..+.+..+......+++.+...+..   ..+..+.. ++++|++.|++|+.+..++.+++.+.|.+.+.......+
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~  364 (401)
T PRK11043        291 LSHPSLVPLLIPFCVMAAANGAIYPIV---VAQALRPF-PQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTGS  364 (401)
T ss_pred             hccCcHHHHHHHHHHHHHHHHHHHHHH---HHHHhhhC-cccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHHH
Confidence              2233334444555666666554432   23333444 568999999999999999999999999998865444443

>PRK10133 L-fucose transporter; Provisional

Probab=99.93  E-value=4.1e-23  Score=231.76  Aligned_cols=365  Identities=13%  Similarity=0.066  Sum_probs=251.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ..+....+...+.........|.+ ++++|.++.+.++..+.+.++..+++++.|++.||+|+|+.+  ..++.+.+++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l--~~g~~~~~~~~  105 (438)
T PRK10133         29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI--ITGLFLYALGA  105 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHHH
Confidence            444455555556666666677764 888999999999999999999999999999999999999955  77777777777


Q ss_pred             HHh---hcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----
Q psy17194        356 FII---PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD----  428 (871)
Q Consensus       356 ~~~---~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~----  428 (871)
                      +++   ..+++++.+++.+++.|+|.+...+...+...+.   .++++++..+++.+....+|..++|.+++.+..    
T Consensus       106 ~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~---~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~  182 (438)
T PRK10133        106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVL---GPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP  182 (438)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            664   4577888999999999999998866665554432   233556667899999999999999999876541    


Q ss_pred             --------------h--------hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccc
Q psy17194        429 --------------A--------IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR  486 (871)
Q Consensus       429 --------------~--------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (871)
                                    .        .+|++.|+....+..+.+.+.. ..+.++. +            +++        +.
T Consensus       183 ~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~-~~~~p~~-~------------~~~--------~~  240 (438)
T PRK10133        183 HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIM-LTKFPAL-Q------------SDN--------HS  240 (438)
T ss_pred             ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCC-C------------ccc--------cc
Confidence                          0        2455555443332222222221 1111000 0            000        00


Q ss_pred             ccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHH
Q psy17194        487 QPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGF  566 (871)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~  566 (871)
                      ++..       .                                                                    
T Consensus       241 ~~~~-------~--------------------------------------------------------------------  245 (438)
T PRK10133        241 DAKQ-------G--------------------------------------------------------------------  245 (438)
T ss_pred             cccc-------c--------------------------------------------------------------------
Confidence            0000       0                                                                    


Q ss_pred             HHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHH-HHhcCCCccchhhhhhccc
Q psy17194        567 MLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWI-EDNLTTDNWKIGMIWLPAF  645 (871)
Q Consensus       567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l-~~~~g~s~~~~gl~~~~~~  645 (871)
                                          ....+.++++++|.++...+..++.....++...+++.|+ ++.+|+++.+.|+.+.+..
T Consensus       246 --------------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~  305 (438)
T PRK10133        246 --------------------SFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM  305 (438)
T ss_pred             --------------------chhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Confidence                                0000135688999988777777777777777778889885 6788999999999999999


Q ss_pred             hhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q psy17194        646 FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS  725 (871)
Q Consensus       646 ~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  725 (871)
                      ++.+++++++|++.||+++||  .+..+..+.++++++..+..+. ..+..+...|++.+...+...+...+..    ++
T Consensus       306 ~~~~vG~~~~g~l~~r~g~~~--~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~----~~  378 (438)
T PRK10133        306 VCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNL----GQ  378 (438)
T ss_pred             HHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHccc----ch
Confidence            999999999999999999888  4445554444444333332222 2244566677877887776555544443    34


Q ss_pred             ccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHH
Q psy17194        726 VYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNIL  771 (871)
Q Consensus       726 ~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~  771 (871)
                      +.+.++++.++ ..+|+.++|.+.|.+.|..| .+.+|++.....+.
T Consensus       379 ~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~  424 (438)
T PRK10133        379 DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV  424 (438)
T ss_pred             hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence            56888888864 56799999999999999988 77777655444333

>PRK15403 multidrug efflux system protein MdtM; Provisional

Probab=99.93  E-value=4.8e-23  Score=230.05  Aligned_cols=354  Identities=13%  Similarity=0.091  Sum_probs=251.2

Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      ......+.+|. +.++++.+..+.++..+.+.++..+++++.|+++||+|||+.+  ..+..+.+++.+.+.++++.+.+
T Consensus        31 ~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l--~~~~~~~~~~~~~~~~a~~~~~l  107 (413)
T PRK15403         31 TTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVL--ITGALIFTLACAATLFTTSMTQF  107 (413)
T ss_pred             HHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHH--HHHHHHHHHHHHHHHHcCCHHHH
Confidence            34445555555 5667999999999999999999999999999999999999955  67777888888888888999999


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      ++.++++|++.+...+..   .....+.++++++++++++.+....++..+||.+++.+.++.||++.|++.+++.++..
T Consensus       108 ~~~r~l~Gi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~  184 (413)
T PRK15403        108 LIARFIQGTSICFIATVG---YVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAF  184 (413)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            999999999887542222   22334455668899999999999999999999999999999999999999888766655


Q ss_pred             HHHHH-HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhh
Q psy17194        448 PVLIY-LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK  526 (871)
Q Consensus       448 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (871)
                      +..++ .++.++    +            +        +. +. + .    +.                           
T Consensus       185 ~~~~~~lp~~~~----~------------~--------~~-~~-~-~----~~---------------------------  206 (413)
T PRK15403        185 VGLLLAMPETVK----R------------G--------AV-PF-S-A----KS---------------------------  206 (413)
T ss_pred             HHHHHhCCCCcc----c------------c--------CC-CC-C-h----HH---------------------------
Confidence            44332 221100    0            0        00 00 0 0    00                           


Q ss_pred             hccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHH
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                                                                                   ...++++++|||.++...+
T Consensus       207 -------------------------------------------------------------~~~~~~~ll~~~~~~~~~l  225 (413)
T PRK15403        207 -------------------------------------------------------------VLRDFRNVFRNRLFLTGAA  225 (413)
T ss_pred             -------------------------------------------------------------HHHHHHHHHcCHHHHHHHH
Confidence                                                                         0012467889999999888


Q ss_pred             HHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHH-----HHHHHHHhhHH
Q psy17194        607 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV-----AVGLVLEGLCC  681 (871)
Q Consensus       607 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~-----~~g~~~~~~~l  681 (871)
                      ..++.+..++.+....|.++++.+|+++.+.|+.+.+...+.++++.+.+++.++..++|....     .+|..+..++.
T Consensus       226 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~  305 (413)
T PRK15403        226 TLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGN  305 (413)
T ss_pred             HHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            8888888888888889999999999999999999999999999988888888765555453211     12222221111


Q ss_pred             hhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHH
Q psy17194        682 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  761 (871)
Q Consensus       682 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~  761 (871)
                      +.  ..++.+.....++++++|.+...+..... +.  ... ...+|++.|+.++.+..+..+++.+.|++.++ +-...
T Consensus       306 ~~--~~~~~~~~~~~~~l~~~G~~~~~p~~~~~-al--~~~-~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~  378 (413)
T PRK15403        306 LL--WPHVWLWSVLGTSLYAFGIGLIFPTLFRF-TL--FSN-NLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLP  378 (413)
T ss_pred             HH--ccccHHHHHHHHHHHHHHHHHHhHHHHHH-Hh--ccC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchH
Confidence            11  12222223556666777777665543321 11  111 33469999999999999999999999988776 55666


Q ss_pred             HHHHHHHHHHHH
Q psy17194        762 NFLIAFMNILYA  773 (871)
Q Consensus       762 ~~~~a~~~~~~~  773 (871)
                      |...+++..+..
T Consensus       379 ~~~~~~~~~~~~  390 (413)
T PRK15403        379 FHLLAVVAGVIV  390 (413)
T ss_pred             HHHHHHHHHHHH
Confidence            666655554443

>TIGR00882 2A0105 oligosaccharide:H+ symporter

Probab=99.93  E-value=3.2e-23  Score=231.21  Aligned_cols=379  Identities=11%  Similarity=0.092  Sum_probs=253.3

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  351 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~  351 (871)
                      ||.++.+....++...+...+.+++|.|+++++|.++.+.|++.+...++..+++++.|+++||+|||+.++  .+....
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~--~~~~~~   78 (396)
T TIGR00882         1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLL--WIISGL   78 (396)
T ss_pred             ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH--HHHHHH
Confidence            467788888888888888999999999999999999999999999999999999999999999999999663  222222


Q ss_pred             HHHHH---Hhhcch-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        352 GLCCF---IIPFST-----SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       352 ~~~~~---~~~~~~-----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      .++..   .+...+     .....++..++.+++.+..    .+......+... ++++...|.......+|.+++|.++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~  153 (396)
T TIGR00882        79 LVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAG----AGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCASIA  153 (396)
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc----hhhHHHHHHHhh-hhcccccchhhhhcccHHHHHHHHH
Confidence            22211   111111     1112233344455555544    333333322221 2335567777788899999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      |.+.+ .+|+..|++.+++.++..++.+...+..   + +++. .  +    +           ..+.      +.    
T Consensus       154 g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~---~-~~~~-~--~----~-----------~~~~------~~----  200 (396)
T TIGR00882       154 GILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA---P-SSAT-V--A----N-----------ALGA------NA----  200 (396)
T ss_pred             hhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC---c-hhhh-h--h----c-----------cccc------cc----
Confidence            98866 5999999988777766554443322100   0 0000 0  0    0           0000      00    


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       201 --------------------------------------------------------------------------------  200 (396)
T TIGR00882       201 --------------------------------------------------------------------------------  200 (396)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc---CCCccchhhhhhccchhhhhhhhhhhhhhh
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL---TTDNWKIGMIWLPAFFPHVFGVVITVKLAK  660 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d  660 (871)
                       ...+..++.+++|||+++...+..++....+.....+.|.|+++.+   +.+....|++.....+...++.+..|++.|
T Consensus       201 -~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~  279 (396)
T TIGR00882       201 -SAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIIN  279 (396)
T ss_pred             -CCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             0000012467888998877766666666566666667899987765   556667888888888888889999999999


Q ss_pred             ccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH-HHHHHH
Q psy17194        661 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYS  739 (871)
Q Consensus       661 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~-~~~~~~  739 (871)
                      |+++|+  ...++..+.++....+....+.+.+.+..+..+++......   ....+..+..+++.++++.+. +|....
T Consensus       280 r~g~~~--~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~at~~~~~~~~~~~  354 (396)
T TIGR00882       280 RIGAKN--ALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLV---GCFKYITSQFDVRLSATIYLIGFQFAKQ  354 (396)
T ss_pred             Hhccch--hHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCcceEEEeehHHHHHHHH
Confidence            999988  55566666666666555556666555555555554433211   222333333345666776666 678999


Q ss_pred             HHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHH
Q psy17194        740 LAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVL  776 (871)
Q Consensus       740 ~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~  776 (871)
                      +|+.++|.+.|++.|..||+.+|.+.+++.++.....
T Consensus       355 lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~  391 (396)
T TIGR00882       355 LAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS  391 (396)
T ss_pred             HHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998887766443

>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]

Probab=99.93  E-value=1.7e-23  Score=217.53  Aligned_cols=359  Identities=13%  Similarity=0.079  Sum_probs=268.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhh-
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY-  364 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-  364 (871)
                      .+......+.+...+++++|+|+.|.+++.+...+...+.+++.|.+.||+|.|++.  ..+.++..+..+..+++.+. 
T Consensus        26 ~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~--~~s~~l~~IP~~~~~~a~~~~  103 (417)
T COG2223          26 GFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWT--ILSMLLLLIPCLGLAFAVTYP  103 (417)
T ss_pred             HHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHH--HHHHHHHHHHHHHHHHHccCC
Confidence            333333444455557789999999999999999999999999999999999999966  66666666776666665443 


Q ss_pred             --HHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC---hhhHHHHH
Q psy17194        365 --QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG---FTALNFLI  439 (871)
Q Consensus       365 --~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g---~~~~f~~~  439 (871)
                        +.+++..++.|++.+..    ...+.+...-+|++++|.++|+.. .+++|..+...+...+....|   |+.+..+.
T Consensus       104 ~~~~ll~~gll~G~~GasF----av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~  178 (417)
T COG2223         104 STWQLLVIGLLLGLAGASF----AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIY  178 (417)
T ss_pred             chHHHHHHHHHHhccccee----hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence              47777667777665543    444455556678899999999999 999999999999999999999   89888888


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcC
Q psy17194        440 AFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTN  519 (871)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (871)
                      .+..++..++.++..+.....                          +...                             
T Consensus       179 ~~~l~v~~v~~~~~~~d~p~~--------------------------r~~~-----------------------------  203 (417)
T COG2223         179 VVALAIAAVLAWLGMNDVPEH--------------------------RASV-----------------------------  203 (417)
T ss_pred             HHHHHHHHHHHHHHhCCChhh--------------------------hccc-----------------------------
Confidence            777777666665544310000                          0000                             


Q ss_pred             CCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccch
Q psy17194        520 GVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDP  599 (871)
Q Consensus       520 ~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  599 (871)
                                                                                     ++..+  .+++.+++++
T Consensus       204 ---------------------------------------------------------------~~~~~--~~~~~v~~~~  218 (417)
T COG2223         204 ---------------------------------------------------------------KPQLP--AQLKAVFSNK  218 (417)
T ss_pred             ---------------------------------------------------------------cccch--hHHHHHhcCc
Confidence                                                                           00000  1246788999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhh
Q psy17194        600 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  679 (871)
Q Consensus       600 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~  679 (871)
                      +.|..++.++..+.++-++..++|.|++++||.++.++|.......+...+.++.+|+++||+|.+|  +....+..+++
T Consensus       219 ~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r--v~~~~f~~~~~  296 (417)
T COG2223         219 DTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR--VTLAVFVGMAL  296 (417)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh--HHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999988  44444455544


Q ss_pred             HHhhhcch-------hhhHHHH----HHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        680 CCFIIPFS-------TSYQMLM----LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       680 ~l~~~~~~-------~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      +.+.....       .+.....    ...+..|+|.|.+        -..++.+.+++.|.+.|+......+|+..-|..
T Consensus       297 ~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv--------fk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~  368 (417)
T COG2223         297 AAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV--------FKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLA  368 (417)
T ss_pred             HHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchh--------eeechHHHHhhhhHHHHHHHHhccccccchhHH
Confidence            44444322       2222222    2333445554443        445555557889999999999999999999999


Q ss_pred             HHHhHhhhC-hHHHHHHHHHHHHHHHHHHHHHhc
Q psy17194        749 AGGIVDAIG-FTALNFLIAFMNILYAPVLIYLKN  781 (871)
Q Consensus       749 ~g~l~~~~g-~~~~~~~~a~~~~~~~~~~~~~~~  781 (871)
                      .|...+.+| +..+|++...+.+++....+..+.
T Consensus       369 ~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~  402 (417)
T COG2223         369 FGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA  402 (417)
T ss_pred             HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998 888888888888877766655543

>PRK11010 ampG muropeptide transporter; Validated

Probab=99.93  E-value=1.9e-22  Score=229.54  Aligned_cols=383  Identities=15%  Similarity=0.126  Sum_probs=255.2

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-----CchhHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-----PTYQWL  342 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~  342 (871)
                      +..++++...++...+............+|.++++ .|.+..+++... ...... ++.+++++++||+     ||||.+
T Consensus         7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~   83 (491)
T PRK11010          7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLGRRRGW   83 (491)
T ss_pred             HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCCCchHH
Confidence            34455666677777777777888888889998876 488988888863 223333 5889999999999     988853


Q ss_pred             HHHHHHHHHHHHHHHhhcc---hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy17194        343 MVAVGLVLEGLCCFIIPFS---TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  419 (871)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~ig  419 (871)
                      + ..+.+..+++...+++.   .+.+.+.+.+++.+++.+...+...+.   ..+..|+++|+++.++...+..+|..++
T Consensus        84 l-l~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~---~~~~~~~~~rg~~~~i~~~g~~lG~llg  159 (491)
T PRK11010         84 L-LATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAW---KTDVLPAEERGAGAAISVLGYRLAMLVS  159 (491)
T ss_pred             H-HHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcChhhhHHHHHHHHHHHHHHHHHH
Confidence            2 34444444444444443   356666666777777776654444333   4444566999999999999999999999


Q ss_pred             HHHHHHHHh-hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccc
Q psy17194        420 PIVAGGIVD-AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLE  498 (871)
Q Consensus       420 p~l~g~l~~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (871)
                      +.+.+++.+ ..||+..|++.+++.++..+..++.++..+     ++      +      +    +   +. .  ++  +
T Consensus       160 ~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~-----~~------~------~----~---~~-~--~~--~  210 (491)
T PRK11010        160 GGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTD-----TI------P------V----P---KT-L--EQ--A  210 (491)
T ss_pred             HHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcc-----cc------c------c----c---cc-h--hh--h
Confidence            999999999 579999999988776665444333221000     00      0      0    0   00 0  00  0


Q ss_pred             ccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhh
Q psy17194        499 YSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQ  578 (871)
Q Consensus       499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  578 (871)
                                                                                                      
T Consensus       211 --------------------------------------------------------------------------------  210 (491)
T PRK11010        211 --------------------------------------------------------------------------------  210 (491)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhh-ccchhhhhhhhhhhh
Q psy17194        579 LNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWL-PAFFPHVFGVVITVK  657 (871)
Q Consensus       579 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~-~~~~~~~i~~~~~g~  657 (871)
                               ...+++++++++.++...+..++.....++...+.+.|+.+.+|+|..+.|++.. ...++.+++.+++|+
T Consensus       211 ---------~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~  281 (491)
T PRK11010        211 ---------VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGI  281 (491)
T ss_pred             ---------HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                     0002345666676665555555555666666778888887889999999999985 556799999999999


Q ss_pred             hhhccCchhhHHHHHHHHHHhhHH---hhhcch-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH
Q psy17194        658 LAKLYPTYQWLMVAVGLVLEGLCC---FIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI  733 (871)
Q Consensus       658 l~d~~~~~~~~~~~~g~~~~~~~l---~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~  733 (871)
                      +.||+++||.  ..++.++.+++.   ..+... .+.+.+....+...+..+.......+......+   ++..++..|+
T Consensus       282 L~dr~g~~~~--l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~---~~~~~t~~gl  356 (491)
T PRK11010        282 LMQRLSLFRA--LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCN---KSFSATQFAL  356 (491)
T ss_pred             HHHHHhHHHH--HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CCCcHHHHHH
Confidence            9999998773  333333322222   222222 233322223333222223333334444555554   7778999999


Q ss_pred             HHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        734 ADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       734 ~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      .|...++|+.+++.+.|.+.|..||+..|.+.+++.+++....+..+
T Consensus       357 ~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~  403 (491)
T PRK11010        357 LSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR  403 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988888888776665554

>PRK09952 shikimate transporter; Provisional

Probab=99.93  E-value=1.5e-22  Score=228.08  Aligned_cols=376  Identities=11%  Similarity=0.067  Sum_probs=236.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCchhHHHHH-----HhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNL--TTDNWKIGMIW-----LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~s~~~~g~~~-----~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      ....+..++.......+....+.++.+++  +.++. .++..     +...++..+++++.|+++||+|||+.+  ..+.
T Consensus        25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l--~~~~  101 (438)
T PRK09952         25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML--MLTV  101 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH--HHHH
Confidence            33334444444444444444555555554  56665 34443     234455678889999999999999965  7788


Q ss_pred             HHHHHHHHHhhcchhhH--------HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQ--------MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP  420 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp  420 (871)
                      .+.+++.+++++++++.        .+++.++++|++.+...+...   ....+..|+++||+..+..+.+..+|..+++
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~  178 (438)
T PRK09952        102 WMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA---LLAVESAPKNKKAFYSSGVQVGYGVGLLLST  178 (438)
T ss_pred             HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH---HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence            88889998898888876        477789999999998754443   3444556678999999999988889988888


Q ss_pred             HHHHHHHh--------hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccc
Q psy17194        421 IVAGGIVD--------AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAND  492 (871)
Q Consensus       421 ~l~g~l~~--------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (871)
                      .+...+..        .+|||+.|++.++..++.    ++.++..++++   +..+..             ++.++.   
T Consensus       179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~----~~l~~~~~es~---~~~~~~-------------~~~~~~---  235 (438)
T PRK09952        179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA----LWVRNGMEESA---EFEQQQ-------------HEQAAA---  235 (438)
T ss_pred             HHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH----HHHHHhCCCCh---hHHHHH-------------hhcccc---
Confidence            77776653        479999998876554332    12221100000   000000             000000   


Q ss_pred             ccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhc
Q psy17194        493 YKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVM  572 (871)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  572 (871)
                           +.                                                                         
T Consensus       236 -----~~-------------------------------------------------------------------------  237 (438)
T PRK09952        236 -----KK-------------------------------------------------------------------------  237 (438)
T ss_pred             -----cc-------------------------------------------------------------------------
Confidence                 00                                                                         


Q ss_pred             ccchhhhccCCCCCCcccc-hhhhccchhHHHHHH-HHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhh
Q psy17194        573 KPVKEQLNQKKPESHSTVP-IWKLFMDPYIAVCSG-ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVF  650 (871)
Q Consensus       573 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i  650 (871)
                                      +.+ ...++++|+.+...+ ..++.....+....++|.|+++.+|++......+....++..++
T Consensus       238 ----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i  301 (438)
T PRK09952        238 ----------------RIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCL  301 (438)
T ss_pred             ----------------cCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                            000 122455666555443 44555667777888999999988999887665555566777788


Q ss_pred             hhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhh--cc-h-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccc
Q psy17194        651 GVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII--PF-S-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV  726 (871)
Q Consensus       651 ~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~--~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  726 (871)
                      +.++.|+++||+++||.  ...+.++..++.+.+  .. . .+.+.++...+..+++.+...+...+...   |..|++.
T Consensus       302 ~~~~~g~l~Dr~grr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---e~~p~~~  376 (438)
T PRK09952        302 TIPCFAWLADRFGRRRV--YITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFT---EMFGASY  376 (438)
T ss_pred             HHHHHHHHHHHhCchHH--HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCcch
Confidence            88999999999999884  334444333332211  11 1 22233333444445555554444444444   4445888


Q ss_pred             cchHHhHHH-HHHHHHHhHhhhhHHHhHhhh--ChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        727 YGSIYAIAD-ISYSLAYAIGPIVAGGIVDAI--GFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       727 ~g~a~g~~~-~~~~~g~~~gp~~~g~l~~~~--g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      ++++.|+.+ ..+.+|+.++|.+.|++.+..  +|...+.+.+++.++++...+..
T Consensus       377 r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~  432 (438)
T PRK09952        377 RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM  432 (438)
T ss_pred             hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence            899999855 446689999999999999865  37777777777777766555544

>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms

Probab=99.93  E-value=8e-24  Score=232.33  Aligned_cols=347  Identities=18%  Similarity=0.295  Sum_probs=247.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      +..++.........+.+|.++.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+++.+...
T Consensus         3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l--~~~~~~~~~~~~~~~   80 (352)
T PF07690_consen    3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVL--IIGLLLFALGSLLLA   80 (352)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH--HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE--eehhhhhhhHHHHhh
Confidence            445555666666777777677888999999999999999999999999999999999999955  666666666644444


Q ss_pred             cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH
Q psy17194        360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI  439 (871)
Q Consensus       360 ~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~  439 (871)
                      ++++.+.+++.+++.|++.+...+......   .+..++++|++++++.+....+|..++|.+++.+.+..||++.|++.
T Consensus        81 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~  157 (352)
T PF07690_consen   81 FASNFWLLLIARFLLGIGSGFFSPASNALI---ADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLIS  157 (352)
T ss_dssp             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHH
T ss_pred             hhhhHHHHhhhccccccccccccccccccc---cccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccc
Confidence            546777888899999999888755554444   44455589999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcC
Q psy17194        440 AFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTN  519 (871)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  519 (871)
                      +++.++..++.....+.+++++.+++               ..     +  +. ++  ..                    
T Consensus       158 ~~~~~~~~il~~~~~~~~~~~~~~~~---------------~~-----~--~~-~~--~~--------------------  192 (352)
T PF07690_consen  158 AILSLIAAILFILFLPEPPPPRERES---------------PK-----E--SE-SK--KP--------------------  192 (352)
T ss_dssp             HHHHHHHHHHHHCCC---STTTT--S---------------ST-----T--TT-----HH--------------------
T ss_pred             cchhhhhhhhHhhhhhhccccccccc---------------cc-----c--cc-cc--cc--------------------
Confidence            88887776543222211100000000               00     0  00 00  00                    


Q ss_pred             CCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCccc-chhhhccc
Q psy17194        520 GVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTV-PIWKLFMD  598 (871)
Q Consensus       520 ~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~  598 (871)
                                                                                         ++.. .++.++++
T Consensus       193 -------------------------------------------------------------------~~~~~~~~~~~~~  205 (352)
T PF07690_consen  193 -------------------------------------------------------------------KPLKPGFKSLFKN  205 (352)
T ss_dssp             -------------------------------------------------------------------HCCCH-CTHHHHH
T ss_pred             -------------------------------------------------------------------ccccccccccccc
Confidence                                                                               0000 14567777


Q ss_pred             hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCC-ccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH-HHHHH
Q psy17194        599 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTD-NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA-VGLVL  676 (871)
Q Consensus       599 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s-~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~-~g~~~  676 (871)
                      |.++......++.....+....++|.|+++.+|++ ..+.+..+....+..+++.++.|++.||+++++..... .+..+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  285 (352)
T PF07690_consen  206 PVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLIL  285 (352)
T ss_dssp             HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence            77764555556566677778899999988999999 89999999999999999999999999999976632322 22222


Q ss_pred             HhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhh
Q psy17194        677 EGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP  746 (871)
Q Consensus       677 ~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp  746 (871)
                      ..+++.......+....+...+..|++.+...+...+...+..+   ++++|++.|+.++.+++|+.+||
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~g~~~g~~~~~~~~~~~igP  352 (352)
T PF07690_consen  286 GALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVP---PEYRGTAFGLFNSIGSLGGIIGP  352 (352)
T ss_dssp             HHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCH---TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHCC
Confidence            22333333333344555556667777777776666666665555   89999999999999999999998

These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.

>KOG2504|consensus

Probab=99.92  E-value=1.2e-23  Score=235.64  Aligned_cols=402  Identities=15%  Similarity=0.149  Sum_probs=295.9

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHH-HHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPI-CGICF  376 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~g~  376 (871)
                      ..++++++.+..+++|+.++......+..++.+.+.||+|.|.  +++.|.++.++++++..++++.|.+++.. ++.|+
T Consensus        70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~--v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~  147 (509)
T KOG2504|consen   70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRT--VMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGL  147 (509)
T ss_pred             HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchH--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhc
Confidence            3467778999999999999999999999999999999999999  44888999999999999999998876654 45588


Q ss_pred             HHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhc
Q psy17194        377 GMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI  456 (871)
Q Consensus       377 g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  456 (871)
                      |.++.+.....++    ..+++++|+.|+|+...+..+|.++-|.+.-.+.+..|||+.+++.+.+.+-.++.....++.
T Consensus       148 G~~~~~~paiviv----~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~  223 (509)
T KOG2504|consen  148 GLGLIYLPAVVIL----GTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL  223 (509)
T ss_pred             cchhhhcchhhhh----hhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            8887743333333    346778999999999999999999999999999999999999999998887777666666553


Q ss_pred             ccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCcc
Q psy17194        457 YDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPE  536 (871)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  536 (871)
                      ....+.. +.++.+.  .....+....+            .+....+++.........+....                 
T Consensus       224 ~~~~~~~-~~~~~~~--~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~-----------------  271 (509)
T KOG2504|consen  224 SPPKKPN-EEKDLRN--SAASVESTPKP------------VELRISERDSGLKKLSLSNLATL-----------------  271 (509)
T ss_pred             CcCCCch-hhhhhcc--ccccccccccc------------cccccccCCCCCCcccccchhhh-----------------
Confidence            3332222 1111100  00000000000            00000000000000000000000                 


Q ss_pred             ccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC--CCCCccc-chhhhccchhHHHHHHHHHHHHH
Q psy17194        537 TPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK--PESHSTV-PIWKLFMDPYIAVCSGALLMANV  613 (871)
Q Consensus       537 ~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~  613 (871)
                                                          +   +..++..  +.+.... -.++++++|.|+...+...+...
T Consensus       272 ------------------------------------~---~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~  312 (509)
T KOG2504|consen  272 ------------------------------------K---RGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYL  312 (509)
T ss_pred             ------------------------------------h---hCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHH
Confidence                                                0   0000000  0000000 01689999999999999999999


Q ss_pred             HHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHH
Q psy17194        614 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  693 (871)
Q Consensus       614 ~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~  693 (871)
                      +++.....+|.|.+ .+|++..+.+++++..++..+++.++.|+++|+...+++++..++++..+++.+++++.++++.+
T Consensus       313 g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l  391 (509)
T KOG2504|consen  313 GFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGL  391 (509)
T ss_pred             HHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence            99999999999986 78999999999999999999999999999999998777778888999999998888999998888


Q ss_pred             HHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHHH
Q psy17194        694 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILY  772 (871)
Q Consensus       694 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~~  772 (871)
                      +...+.+|+..|........++...++   .++...+.|+...+..++..+||++.|.+.|.+| |...|+..+...+++
T Consensus       392 ~~~~~~fG~~~g~~~~l~~~i~~~~~g---~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s  468 (509)
T KOG2504|consen  392 IVFSILFGFCVGSFSSLTPVILVDLVG---LEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLS  468 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHcC---hhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHH
Confidence            888888888888775544446666666   8889999999999999999999999999999998 888999988888887


Q ss_pred             HHHHHHHh
Q psy17194        773 APVLIYLK  780 (871)
Q Consensus       773 ~~~~~~~~  780 (871)
                      +.+.+..+
T Consensus       469 ~~~~~~~~  476 (509)
T KOG2504|consen  469 AVLLLILR  476 (509)
T ss_pred             HHHHHHhH
Confidence            76655554

>PRK10406 alpha-ketoglutarate transporter; Provisional

Probab=99.92  E-value=2.5e-22  Score=226.37  Aligned_cols=364  Identities=11%  Similarity=0.048  Sum_probs=226.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhC---CCchhH---HHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLT---TDNWKI---GMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g---~s~~~~---g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      .++....... .++...++.++++   .+..+.   +.+.+...++..++++++|+++||+|||+.+  ..+..+.+++.
T Consensus        31 ~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l--~~~~~~~~~~~  107 (432)
T PRK10406         31 NLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSM--LISVCMMCFGS  107 (432)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH--HHHHHHHHHHH
Confidence            3333444344 4455556677664   444433   3344445556669999999999999999955  77888888888


Q ss_pred             HHhhcchhhH--------HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        356 FIIPFSTSYQ--------MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       356 ~~~~~~~~~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      +.+++.+++.        .+++.++++|++.+...+....   .+.+..|+++||++.++.......|..+++.+...+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~---~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~  184 (432)
T PRK10406        108 LVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSAT---YMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQ  184 (432)
T ss_pred             HHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHH---HHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8887776543        5788899999999887554444   4455566799999999988888888888887765544


Q ss_pred             --------hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccc
Q psy17194        428 --------DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEY  499 (871)
Q Consensus       428 --------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (871)
                              +.+|||+.|++.++..++..    ++++..++.+             +.+        .+          +.
T Consensus       185 ~~~~~~~~~~~gWr~~F~i~~~~~ll~~----~~~~~~~e~~-------------~~~--------~~----------~~  229 (432)
T PRK10406        185 QTLEDAELREWGWRIPFALGAVLAVVAL----WLRRQLDETS-------------QQE--------TR----------AL  229 (432)
T ss_pred             HhCCHHHHhccchHHHHHHHHHHHHHHH----HHHhcCCCCc-------------hHH--------Hh----------hh
Confidence                    25799999988666554432    1211100000             000        00          00


Q ss_pred             cccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhh
Q psy17194        500 SMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL  579 (871)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  579 (871)
                                                                                                      
T Consensus       230 --------------------------------------------------------------------------------  229 (432)
T PRK10406        230 --------------------------------------------------------------------------------  229 (432)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             ccCCCCCCcccchhhhccchhHHHHHHHHHH-HHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhh
Q psy17194        580 NQKKPESHSTVPIWKLFMDPYIAVCSGALLM-ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL  658 (871)
Q Consensus       580 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l  658 (871)
                         ++    ..++++++++|+++...+...+ ....++.+..++|.|+++.+|++..+.+..+....++..++.++.|++
T Consensus       230 ---~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l  302 (432)
T PRK10406        230 ---KE----AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGAL  302 (432)
T ss_pred             ---cc----cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               00    0024567788887766555444 366778888999999988899999999998888888888888999999


Q ss_pred             hhccCchhhHHHHHHHHHHhhHHh--h--hcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHH
Q psy17194        659 AKLYPTYQWLMVAVGLVLEGLCCF--I--IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA  734 (871)
Q Consensus       659 ~d~~~~~~~~~~~~g~~~~~~~l~--~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~  734 (871)
                      +||+++|+.  ...+..+.++...  .  .....+....+..+....+..+.....   ......|..|++.|++++|+.
T Consensus       303 ~Dr~grr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~fp~~~r~t~~g~~  377 (432)
T PRK10406        303 SDKIGRRTS--MLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSI---SGILKAEMFPAQVRALGVGLS  377 (432)
T ss_pred             HHHcCchHH--HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCCccchhhhHH
Confidence            999998874  3333322222211  1  111122222111111111212221111   223344566688999999998


Q ss_pred             HHHHHH-HHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        735 DISYSL-AYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       735 ~~~~~~-g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +...++ .+...|.+.+. .+..| +...+.+.+++.+++.+..+++
T Consensus       378 ~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~~~l  423 (432)
T PRK10406        378 YAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVSLML  423 (432)
T ss_pred             HHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence            876554 45557887774 46566 4445555556666655554544

>KOG0569|consensus

Probab=99.92  E-value=4.3e-22  Score=216.90  Aligned_cols=352  Identities=13%  Similarity=0.082  Sum_probs=248.8

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHhhhhhhhhhHHH
Q psy17194        105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG---RSYGVLFFARSLQGVGSAFADTSGLA  181 (871)
Q Consensus       105 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---~s~~~l~~~r~l~G~~~g~~~~~~~a  181 (871)
                      ...+.+.+++.+|.++++++.|.++||+|||..+.++.++..++.+++.++   +++++++++|++.|+..|........
T Consensus        60 ~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pm  139 (485)
T KOG0569|consen   60 LLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPM  139 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            457788999999999999999999999999999999988888888777655   78999999999999999999999999


Q ss_pred             HhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHH--HHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhh-----c
Q psy17194        182 MIADRFTEENERSQALGIALAFISFGCLVAPPFGGA--LYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL-----N  254 (871)
Q Consensus       182 ~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~--l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~-----~  254 (871)
                      ++.|. +|++.||..-...+.+..+|.++|..++.-  +.+.-.|++.+.+..+++++..++.. +.||+|+-.     +
T Consensus       140 yl~E~-sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~k~~  217 (485)
T KOG0569|consen  140 YLTEI-SPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIKKGD  217 (485)
T ss_pred             HHhhc-ChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHHcCC
Confidence            99997 688999999999999999999999777633  22344599999998888877665544 455554210     0


Q ss_pred             -----------------------------cCCCCCCcccchhhhhcchhHHHHHHH----HHHHHHHHHHHHHHHHHHHH
Q psy17194        255 -----------------------------QKKPESHSTVPIWKLFMDPYIAVCSGA----LLMANVALAFLEPTISLWIE  301 (871)
Q Consensus       255 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~  301 (871)
                                                   +++.++++..+.+++++++..+.-...    .+...+.......++...+-
T Consensus       218 ~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~  297 (485)
T KOG0569|consen  218 EEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF  297 (485)
T ss_pred             HHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence                                         000011133457788888665443322    22223332233344444455


Q ss_pred             HhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc----hhh--HH---HHHHHH
Q psy17194        302 DNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----TSY--QM---LMLPIC  372 (871)
Q Consensus       302 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~---l~~~~~  372 (871)
                      +..|++..++.++....++...+..+++.++.||+|||+++  +.+..+..+..+++...    ...  |.   .+++.+
T Consensus       298 ~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl--l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~  375 (485)
T KOG0569|consen  298 KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL--LISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIF  375 (485)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence            56799999999999999999999999999999999999966  44444444444433221    111  22   123333


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH-HHH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP-VLI  451 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~  451 (871)
                      ++.++++...+  ....-...+.+|++.|..++++..+...+..++-......+.+.+|- ..|+++.+.+++..+ ++.
T Consensus       376 ~~~~~f~~G~g--pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~  452 (485)
T KOG0569|consen  376 LFIISFAIGPG--PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR  452 (485)
T ss_pred             HHHHhhhcCCC--chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence            33333333211  11122234456779999999999999999999999999999999987 666666665555544 445


Q ss_pred             HHhhcccCCCCc
Q psy17194        452 YLKNIYDFKPFE  463 (871)
Q Consensus       452 ~~~~~~~~~~~~  463 (871)
                      ++++++.|...+
T Consensus       453 ~lPETkgr~~~e  464 (485)
T KOG0569|consen  453 YLPETKGRTPYE  464 (485)
T ss_pred             hCcccCCCCHHH
Confidence            566666555443

>TIGR00879 SP MFS transporter, sugar porter (SP) family

Probab=99.92  E-value=4.3e-24  Score=245.06  Aligned_cols=381  Identities=10%  Similarity=0.047  Sum_probs=231.3

Q ss_pred             chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhc---chhhHHHHHHHHHHHHHHhhhhhh
Q psy17194        308 NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF---STSYQMLMLPICGICFGMALVDTA  384 (871)
Q Consensus       308 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~l~g~g~~~~~~~  384 (871)
                      ..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+..++.+++..   ..+.+.+++.+++.|++.+...+.
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~  147 (481)
T TIGR00879        70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSL--LIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASAL  147 (481)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHH--HHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhH
Confidence            78999999999999999999999999999999965  5566666666666533   334457888899999998887443


Q ss_pred             hhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH---HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy17194        385 LLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA---GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKP  461 (871)
Q Consensus       385 ~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~---g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  461 (871)
                      ...   .+.+..++++|++++++.+....+|..+++.+.   +.+.+..||++.|++.++..++..+..+++++......
T Consensus       148 ~~~---~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~  224 (481)
T TIGR00879       148 VPM---YLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLV  224 (481)
T ss_pred             HHH---HHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence            333   345556679999999999999999999999998   66667789999999966655555444444433211000


Q ss_pred             CchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchh
Q psy17194        462 FENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFG  541 (871)
Q Consensus       462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g  541 (871)
                      .+++.++..+.     ..  +..+..+......+..+.                                          
T Consensus       225 ~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~------------------------------------------  255 (481)
T TIGR00879       225 GKGRVEEARKS-----LA--RLRGTSGEDKELLDELEL------------------------------------------  255 (481)
T ss_pred             HcCChHHHHHH-----HH--HHhCCCCCcHHHHHHHHH------------------------------------------
Confidence            00000000000     00  000000000000000000                                          


Q ss_pred             HHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhcc---chhHHHHHHHHHHHHHHHHHh
Q psy17194        542 GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM---DPYIAVCSGALLMANVALAFL  618 (871)
Q Consensus       542 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~  618 (871)
                                                  .. +....+.+.   .......+++.++   .+.++...+..+.........
T Consensus       256 ----------------------------~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (481)
T TIGR00879       256 ----------------------------ID-IKRSIEKRS---VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAI  303 (481)
T ss_pred             ----------------------------HH-HHHHHHHhh---ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeeh
Confidence                                        00 000000000   0000011122222   233333333333333333344


Q ss_pred             hhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhc---c--hhh----
Q psy17194        619 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP---F--STS----  689 (871)
Q Consensus       619 ~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~---~--~~~----  689 (871)
                      ..+.|.++ +.+|++..+.++...+..++.+++.++.|++.||+++|+  ...+++.+.+++++++.   .  ..+    
T Consensus       304 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (481)
T TIGR00879       304 MYYSPTIF-ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP--LLLIGAAGMAICLFVLGILGASFVTGSSKS  380 (481)
T ss_pred             HHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence            55566665 567999999999999999999999999999999999887  44555666666655543   1  111    


Q ss_pred             -hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHH
Q psy17194        690 -YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFM  768 (871)
Q Consensus       690 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~  768 (871)
                       ....+.....++.+.+....+..  .....|..+++.++++.|+.++..++|+.++|.+.|.+.++.|+++.|++.+++
T Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~  458 (481)
T TIGR00879       381 SGNVAIVFILLFIAFFAMGWGPVP--WVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGL  458 (481)
T ss_pred             hhHHHHHHHHHHHHHHHccccCee--hhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHH
Confidence             22222222222222222211111  122234455788999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHHH
Q psy17194        769 NILYAPVLIYL  779 (871)
Q Consensus       769 ~~~~~~~~~~~  779 (871)
                      +++++.+.+++
T Consensus       459 ~~~~~i~~~~~  469 (481)
T TIGR00879       459 NVLGLIFVYFF  469 (481)
T ss_pred             HHHHHHHHhee
Confidence            87777655443

This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.92  E-value=3.5e-22  Score=227.54  Aligned_cols=376  Identities=14%  Similarity=0.147  Sum_probs=244.6

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHH-HHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYL-RFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      +.+..+++..+...+.++...+.++.+. +++|.                           +.++.+++.+.+.......
T Consensus        21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~---------------------------s~~~a~~~~~~~~~~~~~~   73 (500)
T PRK09584         21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGM---------------------------SEADSITLFSSFSALVYGL   73 (500)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHH
Confidence            3345666777777777777777788877 45544                           7888888888887776667


Q ss_pred             hhhhhHhhhh-hCCchHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh-hhHHHHHH
Q psy17194        122 NPFSGALIDR-IGYDLPMMIGLCIMFLSTALFACGR-SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE-NERSQALG  198 (871)
Q Consensus       122 ~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~-s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~-~~r~~~~g  198 (871)
                      .+++|+++|| +|||++++++.++.+++..++++++ +.+.++++|+++|++.|...+...+++.|+++++ ++|.++++
T Consensus        74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~  153 (500)
T PRK09584         74 VAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFT  153 (500)
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcch
Confidence            7899999999 5999999999999999999998874 5667778899999999999999899999998543 34567899


Q ss_pred             HHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHH---hcccchhhhccCCCCCCcc------------
Q psy17194        199 IALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLL---VMKPVKEQLNQKKPESHST------------  263 (871)
Q Consensus       199 ~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~---~~~~~~~~~~~~~~~~~~~------------  263 (871)
                      +++.+.++|.++||.+++++.+++|||+.|++.++..++..+...+   ..++..++.+.++.+....            
T Consensus       154 ~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (500)
T PRK09584        154 MYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIA  233 (500)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999987655544333222   2222111110000000000            


Q ss_pred             ---------c----------------------chhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhCCCc--
Q psy17194        264 ---------V----------------------PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIED--NLTTDN--  308 (871)
Q Consensus       264 ---------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~g~s~--  308 (871)
                               .                      ...+.-| ++.+.. +..++....+.......+.++..  ..+.+.  
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~  311 (500)
T PRK09584        234 IATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSI  311 (500)
T ss_pred             HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccc
Confidence                     0                      0000101 122222 22223333344444444444332  111111  


Q ss_pred             ----hhHHHHHHhhHHhHHHHHHHH----HHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchh---------hHHHHHHH
Q psy17194        309 ----WKIGMIWLPAFFPHVFGVVIT----VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS---------YQMLMLPI  371 (871)
Q Consensus       309 ----~~~g~~~~~~~~~~~~~~~~~----g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~~~~  371 (871)
                          ...+++.+...+..++..++.    +++.+|.+..+  .+.+++++.+++.+......+         .++.+...
T Consensus       312 ~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~--~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~  389 (500)
T PRK09584        312 LGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPH--KFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASY  389 (500)
T ss_pred             cceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHH
Confidence                124566666666666666666    45555555444  347778888888777655443         45677788


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh----------hhChhhHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD----------AIGFTALNFLIAF  441 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~----------~~g~~~~f~~~~~  441 (871)
                      ++.++|.....|.........   .|++.||+++|++.....+|..++..+.+....          ..++.+.|...++
T Consensus       390 ~l~~~ge~~~~p~g~s~~~~~---aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~  466 (500)
T PRK09584        390 GLQSIGELMISGLGLAMVAQL---VPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGI  466 (500)
T ss_pred             HHHHHHHHHHhHHHHHHHHHh---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHH
Confidence            889999999866666665444   455999999998877666666666655543211          1236788887777


Q ss_pred             HHHHHHHHHHH
Q psy17194        442 MNILYAPVLIY  452 (871)
Q Consensus       442 ~~~~~~~~~~~  452 (871)
                      ..++..++.+.
T Consensus       467 ~~~~~a~~~~~  477 (500)
T PRK09584        467 ATAVIAVLMLL  477 (500)
T ss_pred             HHHHHHHHHHH
Confidence            66554444333

>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator)

Probab=99.92  E-value=5.3e-23  Score=227.18  Aligned_cols=350  Identities=10%  Similarity=0.037  Sum_probs=237.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      ++..+...+..........++.|.++++++|.++.+.+++.+...++..++.++.|+++||+|+|+.+  ..+..+..++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~i~   80 (366)
T TIGR00886         3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTT--TLSLLLLAIP   80 (366)
T ss_pred             hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHH--HHHHHHHHHH
Confidence            44555566666667777778888778889999999999999999999999999999999999999955  6777778888


Q ss_pred             HHHhhcch-hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh----
Q psy17194        355 CFIIPFST-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA----  429 (871)
Q Consensus       355 ~~~~~~~~-~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~----  429 (871)
                      .+++.+.+ +.+.+++.+++.|++.+..    .+....+.+..++++|+++.++.....++|..+++.+++.+.+.    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~  156 (366)
T TIGR00886        81 CLWAGLAVQSYSVLLLLRLFIGIAGGSF----ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFG  156 (366)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHhchhh----HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence            88888888 8888888899888875543    22334455556778999999999988888888888888777653    


Q ss_pred             ------hChhhHHHH-HHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccc
Q psy17194        430 ------IGFTALNFL-IAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQ  502 (871)
Q Consensus       430 ------~g~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (871)
                            .+|++.|++ .+++..+..++.+...+...+++  ++         +  .   +   .+.+..  ..  ..   
T Consensus       157 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~--~---~---~~~~~~--~~--~~---  210 (366)
T TIGR00886       157 AGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK--PA---------T--G---K---LSFKGA--RW--SV---  210 (366)
T ss_pred             ccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc--cc---------c--h---h---cccccc--cc--cc---
Confidence                  379999844 34444333333332221110000  00         0  0   0   000000  00  00   


Q ss_pred             ccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccC
Q psy17194        503 ETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK  582 (871)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  582 (871)
                                   .                                                                  
T Consensus       211 -------------~------------------------------------------------------------------  211 (366)
T TIGR00886       211 -------------G------------------------------------------------------------------  211 (366)
T ss_pred             -------------c------------------------------------------------------------------
Confidence                         0                                                                  


Q ss_pred             CCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhcc
Q psy17194        583 KPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY  662 (871)
Q Consensus       583 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~  662 (871)
                         +......++++++|+++...+..++.....+.+..++|.|+++.+|+++.+.|++.....+..+++.++.|++.||+
T Consensus       212 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~  288 (366)
T TIGR00886       212 ---TGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL  288 (366)
T ss_pred             ---chhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh
Confidence               00000135677888888877777777777778888999999999999999999999999999999999999999999


Q ss_pred             CchhhHHHHHHHHHHhhHHhhhcchh--hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHH
Q psy17194        663 PTYQWLMVAVGLVLEGLCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  740 (871)
Q Consensus       663 ~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~  740 (871)
                      ++||.+.........+..++.+....  +.+..+......+++.+.......+...+..    ++++|+++|+++..+++
T Consensus       289 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~g~~~g~~~~~~~~  364 (366)
T TIGR00886       289 GGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF----RRATGAVSGLVGAIGNL  364 (366)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc----hhhcccHHHHHHHhccC
Confidence            98875443333333333333333332  3443334444444444444444444444433    47899999999998887


Q ss_pred             HH
Q psy17194        741 AY  742 (871)
Q Consensus       741 g~  742 (871)
                      |+
T Consensus       365 g~  366 (366)
T TIGR00886       365 GG  366 (366)
T ss_pred             CC
Confidence            63

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.92  E-value=5.1e-22  Score=212.40  Aligned_cols=341  Identities=11%  Similarity=0.041  Sum_probs=235.3

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhH-HHHHHHHHHHHHHHh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSA-TGVLFASKAIVQLMV  121 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~l~~~~~  121 (871)
                      ++..++|+-.|+..+ +.....+.|.+.+++|+                           |..| .|.+.++++.+++++
T Consensus        27 ~~~~~lC~fGF~~e~-R~n~s~a~p~L~~elgl---------------------------T~~qv~G~I~s~F~ysYal~   78 (511)
T TIGR00806        27 VLVLYLCFYGFMAQF-RPGESFITPYLLTVLNF---------------------------TEETVTNEIIPVLPYSHLAV   78 (511)
T ss_pred             HHHHHHHHHHHHHHh-hchHHHHHHHHHHHcCC---------------------------CHHHhcchHHHHHHHHHHHH
Confidence            343445554443332 45555667777778766                           8899 999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIAL  201 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~  201 (871)
                      .++.|.++||+|.|+++.++.+.+++..++.++++++..+.+.|++.|++.|... +...++..|+ |+++|+++.|+..
T Consensus        79 qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~Wf-P~kER~ratsi~~  156 (511)
T TIGR00806        79 LVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLV-PPSRYQRAAAYSR  156 (511)
T ss_pred             HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHC-CHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999 8899999998 6799999999999


Q ss_pred             HHHHHHHHHhHHHHHHHHhhhCChhHHHHH--HHHHHHHHHHHHHhcccchhh-----hc----------cCC-CC-C--
Q psy17194        202 AFISFGCLVAPPFGGALYQFAGKEIPFLIL--AFVSLLDGFMLLLVMKPVKEQ-----LN----------QKK-PE-S--  260 (871)
Q Consensus       202 ~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~--~~~~l~~~i~~~~~~~~~~~~-----~~----------~~~-~~-~--  260 (871)
                      .+..+|.+++++++++ ...+|||+-+.+.  ...+.+..+++.+++|.+++.     .+          +.. .+ .  
T Consensus       157 sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~  235 (511)
T TIGR00806       157 AAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGK  235 (511)
T ss_pred             HHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccc
Confidence            9999999999999999 5567999765443  222333333444455533221     00          000 00 0  


Q ss_pred             Cc--c------------cchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHH
Q psy17194        261 HS--T------------VPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGV  326 (871)
Q Consensus       261 ~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~  326 (871)
                      ..  .            .+.+...+|+.+....+-..+...++..+..+......+..+-.+..-|.+-.+..+.+.+..
T Consensus       236 ~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a  315 (511)
T TIGR00806       236 LEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITS  315 (511)
T ss_pred             cchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHH
Confidence            00  0            011223455655544444445555555555555444433322122244566666677778888


Q ss_pred             HHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHH
Q psy17194        327 VITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYA  406 (871)
Q Consensus       327 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~g  406 (871)
                      +..|++-.++.+.-.+.+.+..++.+..++++.+.+++|..+++.++++..+.+..+.....+   +.....+..|..+|
T Consensus       316 ~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i---A~~L~~~~~aLvFG  392 (511)
T TIGR00806       316 FIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI---ASSLSKELCALVFG  392 (511)
T ss_pred             HHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcccceEEEEe
Confidence            889998776644333444555556666777888999999999999999888887744443333   33333366688888


Q ss_pred             HHHHHHHHHHH
Q psy17194        407 IADISYSLAYA  417 (871)
Q Consensus       407 i~~~~~~lg~~  417 (871)
                      +.++..-+-..
T Consensus       393 iNtfvAl~LQt  403 (511)
T TIGR00806       393 INTFVATALKT  403 (511)
T ss_pred             cHHHHHHHHHH
Confidence            87765444333

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters

Probab=99.92  E-value=1.5e-22  Score=222.05  Aligned_cols=346  Identities=19%  Similarity=0.313  Sum_probs=277.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q psy17194        278 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      .....+.............+.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+  ..+..+..++.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~--~~~~~~~~~~~~~   80 (352)
T cd06174           4 LFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVL--LLGLLLFALGSLL   80 (352)
T ss_pred             HHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhh--HHHHHHHHHHHHH
Confidence            3445555666666777777777654 689999999999999999999999999999999999954  7777777888888


Q ss_pred             hhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHH
Q psy17194        358 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNF  437 (871)
Q Consensus       358 ~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~  437 (871)
                      ....++.+.+++.+++.+++.+...+...+...+.   .++++|++++++.+....+|..++|.+.+.+.+..+|++.++
T Consensus        81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  157 (352)
T cd06174          81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEW---FPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFL  157 (352)
T ss_pred             HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHh---CCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            77778888889999999998887755555554444   455899999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccC
Q psy17194        438 LIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVG  517 (871)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (871)
                      +.+++.++..+...+.+                                                               
T Consensus       158 ~~~~~~~~~~~~~~~~~---------------------------------------------------------------  174 (352)
T cd06174         158 ILAILGLLLALLLLFLL---------------------------------------------------------------  174 (352)
T ss_pred             HHHHHHHHHHHHHHHHH---------------------------------------------------------------
Confidence            88776665544332211                                                               


Q ss_pred             cCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhcc
Q psy17194        518 TNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  597 (871)
Q Consensus       518 ~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  597 (871)
                                                                                                      
T Consensus       175 --------------------------------------------------------------------------------  174 (352)
T cd06174         175 --------------------------------------------------------------------------------  174 (352)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH
Q psy17194        598 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  677 (871)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~  677 (871)
                       |.++...+..++..........+.|.++++.+|.+..+.+.......++..++.++.+++.||+++|+. ....+..+.
T Consensus       175 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~  252 (352)
T cd06174         175 -RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL-LLLIGLLLA  252 (352)
T ss_pred             -HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-HHHHHHHHH
Confidence             334444556666777777888889999988889999999999999999999999999999999987662 334566666


Q ss_pred             hhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC
Q psy17194        678 GLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  757 (871)
Q Consensus       678 ~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g  757 (871)
                      .++.+.+....+.+...+..+..+++.+...+.......+..+   ++++++++|+.+..+++|+.++|.+.|.+.|..+
T Consensus       253 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~  329 (352)
T cd06174         253 ALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAP---PEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG  329 (352)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence            6676666666666666777778888888776666656665555   7889999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHH
Q psy17194        758 FTALNFLIAFMNILYAPVLI  777 (871)
Q Consensus       758 ~~~~~~~~a~~~~~~~~~~~  777 (871)
                      ++..+.+.+++.+++.+..+
T Consensus       330 ~~~~~~~~~~~~~i~~i~~~  349 (352)
T cd06174         330 YGGVFLILAALALLAALLLL  349 (352)
T ss_pred             cchHHHHHHHHHHHHHHHhe
Confidence            99999999888888765543

MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3

>PRK11102 bicyclomycin/multidrug efflux system; Provisional

Probab=99.92  E-value=2.4e-22  Score=222.92  Aligned_cols=334  Identities=10%  Similarity=0.134  Sum_probs=233.9

Q ss_pred             HHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQML  367 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  367 (871)
                      +.....+.+|.+.+ ++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+++.+.+.+.++.+.+
T Consensus         6 ~~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--~~~~~~~~i~~~~~~~~~~~~~~   82 (377)
T PRK11102          6 AIDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVI--LGGTLVFALAAVACALAQTIDQL   82 (377)
T ss_pred             HHHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHH--HHHHHHHHHHHHHHHHHccHHHH
Confidence            34455677777665 5899999999999999999999999999999999999855  67777777888888888888888


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      ++.+++.|++.+...+...+..   .+..++++|++++++.+....+|..++|.+++.+.+..||++.|++.+++.++..
T Consensus        83 ~~~~~l~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  159 (377)
T PRK11102         83 IYMRFLHGLAAAAASVVINALM---RDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAA  159 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence            8888988988887644444444   3445568999999999999999999999999999999999999998877766654


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      ++..+..+.+.++               ++.         ++ .+    .+.                            
T Consensus       160 ~~~~~~~~~~~~~---------------~~~---------~~-~~----~~~----------------------------  182 (377)
T PRK11102        160 ALVFFFIPETLPK---------------ERR---------QP-FH----LRT----------------------------  182 (377)
T ss_pred             HHHHHhCCccCcc---------------ccc---------CC-CC----hHH----------------------------
Confidence            4433322110000               000         00 00    000                            


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  607 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  607 (871)
                                                                                  ...++++++++|.++...+.
T Consensus       183 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  202 (377)
T PRK11102        183 ------------------------------------------------------------TIRNFASLFRHKRVLGYMLA  202 (377)
T ss_pred             ------------------------------------------------------------HHHHHHHHHcChHHHHHHHH
Confidence                                                                        00023567888888877777


Q ss_pred             HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH---hhHHhhh
Q psy17194        608 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE---GLCCFII  684 (871)
Q Consensus       608 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~---~~~l~~~  684 (871)
                      .++.+...+.+..+.|.++.+.+|+++.+.|+++....++.+++.++.|++.||+++||  ....+..+.   ++.++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~--~~~~~~~~~~~~~~~~~~~  280 (377)
T PRK11102        203 SGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN--MLRFGLWIQFIMGIWLVVS  280 (377)
T ss_pred             HHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHH
Confidence            77777777788888899988889999999999999999999999999999999999887  444444332   2222222


Q ss_pred             cc-hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHH-HHHHhHhhhhHH
Q psy17194        685 PF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISY-SLAYAIGPIVAG  750 (871)
Q Consensus       685 ~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~-~~g~~~gp~~~g  750 (871)
                      .. ..+.+...+....++.+.+....   .......|.. ++.+|++.++++..+ .+|..+|+.+.+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~~  344 (377)
T PRK11102        281 ALLDLGFWALVVGVAAFVGCVSMISS---NAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLSL  344 (377)
T ss_pred             HHHhhhHHHHHHHHHHHHHHHHHhhH---HHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22 12233333333333333332222   2233334444 688899999988765 466677776654

>PRK15034 nitrate/nitrite transport protein NarU; Provisional

Probab=99.92  E-value=8.1e-22  Score=216.29  Aligned_cols=370  Identities=8%  Similarity=0.020  Sum_probs=243.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      |.++.................+..+.+.++++|+|..+.+++.+...+++.+++++.|++.||+|.|+++  ..+..+.+
T Consensus        34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~--~~~~ll~~  111 (462)
T PRK15034         34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWT--VFSTAILI  111 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH--HHHHHHHH
Confidence            4555555554444455555555555544547999999999999999999999999999999999999965  66666677


Q ss_pred             HHHHHhhcc-----hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        353 LCCFIIPFS-----TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       353 ~~~~~~~~~-----~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      +..+..+++     ++++.+++.+++.|++ +...   .+....+...+|+++||+++|+.....++|..+++.+...+.
T Consensus       112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f---~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i  187 (462)
T PRK15034        112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF---ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVI  187 (462)
T ss_pred             HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH---HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            777777765     7888999999999987 4443   333333444466789999999997666677766655554433


Q ss_pred             -----hh-------------hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccc
Q psy17194        428 -----DA-------------IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPV  489 (871)
Q Consensus       428 -----~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  489 (871)
                           +.             .+|+.+.++..++.++..++.++..+..+.                             .
T Consensus       188 ~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-----------------------------~  238 (462)
T PRK15034        188 FVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-----------------------------S  238 (462)
T ss_pred             HHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-----------------------------c
Confidence                 32             235666666666555554444443220000                             0


Q ss_pred             cccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHH
Q psy17194        490 ANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLL  569 (871)
Q Consensus       490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~  569 (871)
                      +                                                                               
T Consensus       239 ~-------------------------------------------------------------------------------  239 (462)
T PRK15034        239 R-------------------------------------------------------------------------------  239 (462)
T ss_pred             c-------------------------------------------------------------------------------
Confidence            0                                                                               


Q ss_pred             HhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhh
Q psy17194        570 LVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHV  649 (871)
Q Consensus       570 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~  649 (871)
                                       .+....+.++|+|..|..++.+++.+..+.++..++|.|+++.+.  ............+...
T Consensus       240 -----------------~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~  300 (462)
T PRK15034        240 -----------------ASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGA  300 (462)
T ss_pred             -----------------cCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHH
Confidence                             000123678999999999999999999999999999999988663  2222222333456677


Q ss_pred             hhhhhhhhhhhccCchhhHHHHHHHHHHhhHHh----hhcch--hhhHHHHHHHHH----Hhhhhhhcchhhhhhhhhhh
Q psy17194        650 FGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF----IIPFS--TSYQMLMLPICG----ICFGMALVDTALLPTLGYLV  719 (871)
Q Consensus       650 i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~----~~~~~--~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~  719 (871)
                      +..+++|+++||+|++|  +..++++...++.+    .++..  .+.+.....+++    .|+|.|.++    -.+....
T Consensus       301 l~rplgG~LADRiG~~~--vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvf----k~ip~~f  374 (462)
T PRK15034        301 IARSVGGAISDKFGGVR--VTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTF----QMIAVIF  374 (462)
T ss_pred             HHHHhhHHHHHhcCchH--HHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHH----HhhHHHH
Confidence            78899999999999988  44444443333322    12211  234443333333    344444332    1111111


Q ss_pred             hh---c---------------cccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        720 DV---R---------------YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       720 ~~---~---------------~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      +.   +               .+.+.|.+.|+.+....+|+.+-|.+.|...+.+| +..+|+...+..+++..+.+..+
T Consensus       375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y  454 (462)
T PRK15034        375 RQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY  454 (462)
T ss_pred             hhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            10   0               01268899999999999999999999999988866 67778877777777776666554


Q ss_pred             c
Q psy17194        781 N  781 (871)
Q Consensus       781 ~  781 (871)
                      .
T Consensus       455 ~  455 (462)
T PRK15034        455 G  455 (462)
T ss_pred             c
Confidence            3

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.92  E-value=6.3e-22  Score=216.66  Aligned_cols=352  Identities=19%  Similarity=0.252  Sum_probs=265.9

Q ss_pred             HHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhH
Q psy17194         48 VSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA  127 (871)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~  127 (871)
                      ++.-+++..+..+...|.++.+.++.|.                           |..|+|.+.++..+...+..+++|.
T Consensus         7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~---------------------------s~~qIG~l~a~~~~~~i~~~~~~g~   59 (400)
T PF03825_consen    7 LSLMYFLYFFAYGAFLPYLPLYLESRGF---------------------------SGTQIGILLAVGPLARIVSPPFWGA   59 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455566777788888999999999866                           8999999999999999999999999


Q ss_pred             hhhhhC-CchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHH
Q psy17194        128 LIDRIG-YDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISF  206 (871)
Q Consensus       128 l~Dr~G-rr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~  206 (871)
                      ++||++ +|+++.+..++.++........++++.+++.-++..+......|...++..+..   +++++-.|......++
T Consensus        60 ~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~---~~~~~~YG~iRlwGSi  136 (400)
T PF03825_consen   60 IADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYL---GDRGKDYGRIRLWGSI  136 (400)
T ss_pred             HHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHc---ccccCCCCcchhhhhH
Confidence            999986 577888888888887777778889999988888889888888899999888865   3567777888888888


Q ss_pred             HHHHhHHH-HHHHHhhhC---ChhHHHHHHHHHHHHHHHHHHhcccchhhhc-cCCCCCCcccchhhhhcchhHHHHHHH
Q psy17194        207 GCLVAPPF-GGALYQFAG---KEIPFLILAFVSLLDGFMLLLVMKPVKEQLN-QKKPESHSTVPIWKLFMDPYIAVCSGA  281 (871)
Q Consensus       207 G~~lg~~l-~~~l~~~~g---wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (871)
                      |.+++... ++.+....+   ....+++.+...++..... +.+|+.|.+++ +++.++....+.++++|+|++....+.
T Consensus       137 Gf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~  215 (400)
T PF03825_consen  137 GFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLA  215 (400)
T ss_pred             HHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHH
Confidence            88888654 233333333   2345666665554443333 33455442211 112222223345689999999999888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS  361 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (871)
                      .++........+.+.+.|+++.-|.+....+.+++...++.++.-...+++.+|+|.++++  .++.+..++-..+++..
T Consensus       216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll--~~a~~~~~vR~~l~a~~  293 (400)
T PF03825_consen  216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLL--LLALVAYAVRWLLYAYF  293 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH--HHHHHHHHHHHHHHHHh
Confidence            8888889999999999999886547777888888888889999999999999999999855  77888888888777766


Q ss_pred             -hhhHHHHHHH----HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHH-HHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        362 -TSYQMLMLPI----CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADI-SYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       362 -~~~~~l~~~~----~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~-~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                       ++.+..+...    .+.|+.++..   ..+...++.+..|++.|++++++++. ..++|..+|..++|++.|++|.+..
T Consensus       294 ~~~~~~~~~~~~l~q~lhG~tf~~~---~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~  370 (400)
T PF03825_consen  294 SDPWPFIVALQLLGQLLHGLTFGLF---HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM  370 (400)
T ss_pred             cCCcHHHHHHHHHHHhhhhHHHHHH---HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh
Confidence             4444333322    3467777776   33444555555677999999999876 5689999999999999999885543

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.92  E-value=1.1e-21  Score=219.09  Aligned_cols=338  Identities=17%  Similarity=0.172  Sum_probs=243.2

Q ss_pred             HhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCc
Q psy17194         56 NMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD  135 (871)
Q Consensus        56 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr  135 (871)
                      .+.......+++.+.+|+|-                            .....|+.+...++..++.++.|+++|.||||
T Consensus        57 ~~~~~~~a~~l~~I~~diG~----------------------------~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr  108 (599)
T PF06609_consen   57 YFVLVLPASILPYINADIGG----------------------------SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR  108 (599)
T ss_pred             HHHHhccHHHHHHHHHhcCC----------------------------CccchHHHHHHHHHHHHHHHhhHHHHHHhcch
Confidence            33444445677888888763                            45678999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHH
Q psy17194        136 LPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFG  215 (871)
Q Consensus       136 ~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~  215 (871)
                      .+++.+.++..+|.+.++-++|...++++..+.|+|.|..... ...++|.. |.|.|....++.....-....+++.++
T Consensus       109 ~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~-p~k~R~~~~~~~~~~~i~~~~~~~~ia  186 (599)
T PF06609_consen  109 YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELV-PNKWRGLGLAIASIPFIITTWISPLIA  186 (599)
T ss_pred             HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhc-ccchhhhHhHHHHHHHHhhhcccHHHH
Confidence            9999999999999999999999999999999999998877654 66689987 567888777777666555556778887


Q ss_pred             HHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchh-hhccCCC------------------------------------
Q psy17194        216 GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKE-QLNQKKP------------------------------------  258 (871)
Q Consensus       216 ~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~-~~~~~~~------------------------------------  258 (871)
                      ..+..+.+|||.|++..+...+.+++.+++..+++. +.+.++.                                    
T Consensus       187 ~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~  266 (599)
T PF06609_consen  187 QLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYY  266 (599)
T ss_pred             HHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence            777666789999999999877776665555443321 1110000                                    


Q ss_pred             ----------------------------CCCcccchhhhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCch
Q psy17194        259 ----------------------------ESHSTVPIWKLFMD-PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW  309 (871)
Q Consensus       259 ----------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~  309 (871)
                                                  ..+++.-.++++|+ |.+...++..++....++....+.|......++.+..
T Consensus       267 ~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~  346 (599)
T PF06609_consen  267 PWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPI  346 (599)
T ss_pred             CCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc
Confidence                                        00122234567887 4555555666666666777777888877777766553


Q ss_pred             ---hHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH--HHHHhhcchhhHHHHHHHHHHHHHHhhhhhh
Q psy17194        310 ---KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL--CCFIIPFSTSYQMLMLPICGICFGMALVDTA  384 (871)
Q Consensus       310 ---~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~  384 (871)
                         ..++......++..++.++.+.+..+.++-|..++. +..+..+  +.+...-.++....+...++.+++.+.....
T Consensus       347 ~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~-~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~  425 (599)
T PF06609_consen  347 SITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIF-GSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVP  425 (599)
T ss_pred             ccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHH-HHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHH
Confidence               567777788888899999999999988877765433 3333333  3333333345555566677778888776433


Q ss_pred             hhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        385 LLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       385 ~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      .....+..   .|++.-|++.|+..+...+|+.+|..+...+.
T Consensus       426 ~~~~~ql~---~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~  465 (599)
T PF06609_consen  426 AIVIAQLI---VPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF  465 (599)
T ss_pred             HHHeeEee---eCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            33333332   35588999999999999999999977765443

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00895 2A0115 benzoate transport

Probab=99.92  E-value=2.6e-23  Score=232.43  Aligned_cols=361  Identities=16%  Similarity=0.133  Sum_probs=232.9

Q ss_pred             HHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q psy17194        289 LAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLM  368 (871)
Q Consensus       289 ~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  368 (871)
                      ........|. +.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+  ..+..+.+++.++..+.++.+.++
T Consensus        33 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  109 (398)
T TIGR00895        33 LAAMGFAAPA-ISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVL--LWSILLFSVFTLLCALATNVTQLL  109 (398)
T ss_pred             HHHHHhhHHH-HhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHH--HHHHHHHHHHHHHHHHccchHHHH
Confidence            3344444444 5566899999999999999999999999999999999999855  666677777777777788888888


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~  448 (871)
                      +.+++.|++.+...+...+..   .+..|+++|++++++.+....+|..++|.+.+.+.+..||++.|++.+++.++..+
T Consensus       110 ~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~  186 (398)
T TIGR00895       110 ILRFLAGLGLGGLMPNLNALV---SEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL  186 (398)
T ss_pred             HHHHHHhcccccchhhHHHHH---HHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence            888889988887755444444   44455689999999999999999999999999999999999999988655554443


Q ss_pred             HHH-HHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        449 VLI-YLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       449 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      +.+ +.++..+....+++++. .        +.  .++..+     +.  ..   +.  ++ ..++...+...       
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~-~--------~~--~~~~~~-----~~--~~---~~--~~-~~~~~~~~~~~-------  235 (398)
T TIGR00895       187 LLMRFLPESIDFLVSKRPETV-R--------RI--VNAIAP-----QM--QA---EA--QS-ALPEQKATQGT-------  235 (398)
T ss_pred             HHHHhCCCCChHHHhcCHHHH-H--------HH--HHHHHH-----hc--cc---cc--cc-cccccccccch-------
Confidence            333 33322111000000000 0        00  000000     00  00   00  00 00000000000       


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhc---cchhHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLF---MDPYIAVC  604 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~  604 (871)
                                                                               .   +.....++   +.+.....
T Consensus       236 ---------------------------------------------------------~---~~~~~~~~~~~~~~~~~~~  255 (398)
T TIGR00895       236 ---------------------------------------------------------K---RSVFKALFQGKTARITVLL  255 (398)
T ss_pred             ---------------------------------------------------------h---hHHHHHHhcchhHHHHHHH
Confidence                                                                     0   00011111   12333444


Q ss_pred             HHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhh
Q psy17194        605 SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII  684 (871)
Q Consensus       605 ~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~  684 (871)
                      .+..++.....+....++| ++.+.+|+++.+.++......++.+++.++.|++.||+++|+  ...........++...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~  332 (398)
T TIGR00895       256 WLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRV--TALLLLLGAVFAVLVG  332 (398)
T ss_pred             HHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH--HHHHHHHHHHHHHHHH
Confidence            4445555666667777888 555778999999999999999999999999999999999764  3222222222222222


Q ss_pred             cchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHh
Q psy17194        685 PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGI  752 (871)
Q Consensus       685 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l  752 (871)
                      ....+.+......+..|++.+...+...+...+..   |++.+|++.|+.+.+.++|+.+||.+.|.+
T Consensus       333 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l  397 (398)
T TIGR00895       333 STLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY---PTAIRATGVGWAIGIGRLGAIIGPILAGYL  397 (398)
T ss_pred             HHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence            22334444555666677776766555554444444   488899999999999999999999999875

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.92  E-value=2.3e-23  Score=242.11  Aligned_cols=266  Identities=17%  Similarity=0.187  Sum_probs=219.6

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ...++..+...+..+...+.++.+.++|++                           +..+.|++.+.+.++++++.++.
T Consensus        36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~l---------------------------ss~~~G~i~s~~~i~~~~~~i~v   88 (633)
T TIGR00805        36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKL---------------------------STSSSGLINGSYEIGNLLLIIFV   88 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHhhchhhhhhhCC---------------------------CCCcceeeeehhhHHHHHHHHHH
Confidence            444556667777778889999999999876                           88999999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHHhhh-------------------------------------------------
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFACGR-------------------------------------------------  156 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-------------------------------------------------  156 (871)
                      |+++||+|||+.+.++.++++++.+++++.+                                                 
T Consensus        89 ~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~  168 (633)
T TIGR00805        89 SYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKE  168 (633)
T ss_pred             HHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCC
Confidence            9999999999999999999999999998763                                                 


Q ss_pred             --hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh------------
Q psy17194        157 --SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA------------  222 (871)
Q Consensus       157 --s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~------------  222 (871)
                        .+..++++|+++|+|.+..++...+++.|++ |+++|++++++++.+..+|.++|+++++++.+.+            
T Consensus       169 ~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~-~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~  247 (633)
T TIGR00805       169 SLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA-KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVI  247 (633)
T ss_pred             CceehhhHHHHHHHhccCCcchhcCchhhhccC-CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCC
Confidence              2456788999999999999999999999997 6689999999999999999999999999988643            


Q ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhcccchhhhc-c----CCC------CCC-----------cccchhhhh
Q psy17194        223 ----------GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN-Q----KKP------ESH-----------STVPIWKLF  270 (871)
Q Consensus       223 ----------gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~-~----~~~------~~~-----------~~~~~~~~~  270 (871)
                                +|+..|++.+++.++..+..+++.++.|+... .    +++      +++           .....++++
T Consensus       248 l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll  327 (633)
T TIGR00805       248 LTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLL  327 (633)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHH
Confidence                      27788999888888777665555444332110 0    000      000           012345688


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCch
Q psy17194        271 MDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTY  339 (871)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~  339 (871)
                      +||.++...+..++.......+..++|.|+++.+|+++.+++++.....+ +.+++.+++|+++||++.+
T Consensus       328 ~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       328 CNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            99999999999988888999999999999999999999999999877665 5688999999999999844

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional

Probab=99.92  E-value=1.4e-22  Score=256.54  Aligned_cols=384  Identities=14%  Similarity=0.087  Sum_probs=259.4

Q ss_pred             hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhhCCC-chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhH
Q psy17194        267 WKLFMDPYIAVCSGALLMANVALAFLEPTISLW----IEDNLTTD-NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  341 (871)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~  341 (871)
                      +.+++++.+..++...++..+........++.+    +....+.+ ....++..+.+.+..++.+++.|+++||+|||++
T Consensus         5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~   84 (1140)
T PRK06814          5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL   84 (1140)
T ss_pred             hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence            345677777666666666555544332222222    22222221 2456778888899999999999999999999985


Q ss_pred             HHHHHH-HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q psy17194        342 LMVAVG-LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP  420 (871)
Q Consensus       342 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp  420 (871)
                      +..... .+......+.....++++.+++.++++|++.++..+...+.+.+.   .+++++++++|+.++...+|.++||
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~---~~~~~~~~a~~~~~~~~~ig~~igp  161 (1140)
T PRK06814         85 AKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDH---LNKDELLGANALVEAGTFIAILLGT  161 (1140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhh---cCccccchhhHHHHHHHHHHHHHHH
Confidence            422111 122222222222347889999999999999998866666655444   4558999999999999999999999


Q ss_pred             HHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccc
Q psy17194        421 IVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYS  500 (871)
Q Consensus       421 ~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (871)
                      .++|++.+..||++.|+..+++.++.+++.+++++.+....            .      .+     .. .   ...+  
T Consensus       162 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~------~~-----~~-~---~~~~--  212 (1140)
T PRK06814        162 IIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAP------------D------LK-----ID-R---NIIR--  212 (1140)
T ss_pred             HHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCC------------C------Ce-----ec-c---chHH--
Confidence            99999999999999985544444444333333222100000            0      00     00 0   0000  


Q ss_pred             ccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhc
Q psy17194        501 MQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN  580 (871)
Q Consensus       501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  580 (871)
                                                                                                      
T Consensus       213 --------------------------------------------------------------------------------  212 (1140)
T PRK06814        213 --------------------------------------------------------------------------------  212 (1140)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhh
Q psy17194        581 QKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK  660 (871)
Q Consensus       581 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d  660 (871)
                            .....++.+.++|.++...+..++.++..+.+..++|.|+++.+|.++...|++++..+++.++|+++.|++.|
T Consensus       213 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~  286 (1140)
T PRK06814        213 ------STITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSE  286 (1140)
T ss_pred             ------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence                  00002466788899998888888888888888889999999999999999999999999999999999999998


Q ss_pred             ccCchhhHHHHHHHHHHhhHHhhhcc--------------------hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhh
Q psy17194        661 LYPTYQWLMVAVGLVLEGLCCFIIPF--------------------STSYQMLMLPICGICFGMALVDTALLPTLGYLVD  720 (871)
Q Consensus       661 ~~~~~~~~~~~~g~~~~~~~l~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  720 (871)
                      +..+++.  +..+.++.+++.+.+.+                    ..+.+.+++..+++|++.+...++..+..+..++
T Consensus       287 ~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p  364 (1140)
T PRK06814        287 GRITLLY--VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWAN  364 (1140)
T ss_pred             Cceeeee--ehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCC
Confidence            8776553  22333333322222221                    1445556667777788878777766666666555


Q ss_pred             hccccccchHHhHHHHHHHHHHhHhhhhHHHhHh-hhChHHHHHHHHHHHHHHH
Q psy17194        721 VRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-AIGFTALNFLIAFMNILYA  773 (871)
Q Consensus       721 ~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~-~~g~~~~~~~~a~~~~~~~  773 (871)
                         ++.+|+++|++|++.++|+.+|+.+.|.+.+ ..++...+++.+++.++.+
T Consensus       365 ---~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~  415 (1140)
T PRK06814        365 ---PAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA  415 (1140)
T ss_pred             ---cccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence               8899999999999999999999999999874 4567776666555444433

>PRK10207 dipeptide/tripeptide permease B; Provisional

Probab=99.92  E-value=3.7e-22  Score=225.86  Aligned_cols=426  Identities=13%  Similarity=0.052  Sum_probs=267.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh-cCchhHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-YPTYQWLMVAVGLVLE  351 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~  351 (871)
                      +.++.++...+...+.++....+++.|+++++|.+..+++++.+.+.....+..+++|+++|| +||||.+  ..+..+.
T Consensus        14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~--~~g~~~~   91 (489)
T PRK10207         14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI--VLGAIVL   91 (489)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH--HHHHHHH
Confidence            445666667777788889999999999999999999999999988888888888999999999 9999955  7788888


Q ss_pred             HHHHHHhhcchhhHH-HHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        352 GLCCFIIPFSTSYQM-LMLPICGICFGMALVDTALLPTLGYLVDVRYVS--VYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       352 ~~~~~~~~~~~~~~~-l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~--~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      .++.+.+.++.+... +++.+.+.++|.+...+...+...+..   |++  +|++++++++...++|.++||.++|++.+
T Consensus        92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~---p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~  168 (489)
T PRK10207         92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCY---PPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD  168 (489)
T ss_pred             HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhc---CCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            888888877655343 446788889998887666665555444   334  56889999999999999999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCC
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDE  508 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (871)
                      +.||++.|++.++..++.++.+...++..++.+          +++++            .+.      +          
T Consensus       169 ~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~----------~~~~~------------~~~------d----------  210 (489)
T PRK10207        169 KFGYSVTYNLCGAGLIIALLVYFACRGMVKDIG----------SEPDH------------KPM------S----------  210 (489)
T ss_pred             hhChHHHHHHHHHHHHHHHHHHHHcchhhcccC----------CCCCc------------cch------h----------
Confidence            999999999876544444433333322111000          00000            000      0          


Q ss_pred             CcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc
Q psy17194        509 NKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS  588 (871)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (871)
                                   .......  ..+. ....++.......++ ..-....... +.... .++.++...           
T Consensus       211 -------------~~~~~l~--~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~-~i~~~-~f~~~~~~~-----------  260 (489)
T PRK10207        211 -------------FSKLLLV--LLGS-VVMIFVCAWLMHNVE-VANLVLIVLS-IVVTI-IFFREAFKL-----------  260 (489)
T ss_pred             -------------hhhHHHH--HHHH-HHHHHHHHHHHhhhh-HHHHHHHHHH-HHHHH-HHHHHHhcC-----------
Confidence                         0000000  0000 000111111111111 1111111111 11111 121111100           


Q ss_pred             ccchhhhccchhHHHHHHH--HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhc------cchhhhhhhhhhhhhhh
Q psy17194        589 TVPIWKLFMDPYIAVCSGA--LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLP------AFFPHVFGVVITVKLAK  660 (871)
Q Consensus       589 ~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~------~~~~~~i~~~~~g~l~d  660 (871)
                          .+++|+|.+..+.+.  ..+.+..+......+++|.++..+.  ...|+.+.+      ..+..++.+++.+++.|
T Consensus       261 ----~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~--~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~  334 (489)
T PRK10207        261 ----DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHH--EILGFSINPVSFQALNPFWVVVASPILAGIYT  334 (489)
T ss_pred             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccc--cccceEECHHHHHhHhHHHHHHHHHHHHHHHH
Confidence                146677776655432  4444455556668899998864433  233433333      44566678888899999


Q ss_pred             ccCchhh-----HHHHHHHHHHhhHHhhh-------cc---hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q psy17194        661 LYPTYQW-----LMVAVGLVLEGLCCFII-------PF---STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS  725 (871)
Q Consensus       661 ~~~~~~~-----~~~~~g~~~~~~~l~~~-------~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  725 (871)
                      |.++|+.     ..+.+|+++.+++++.+       ..   ..+.++++...+..++|.+...++........++   ++
T Consensus       335 rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP---~~  411 (489)
T PRK10207        335 HLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVP---QH  411 (489)
T ss_pred             HHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCh---HH
Confidence            9987651     12456666666665422       11   1345666778888899989887766666665555   88


Q ss_pred             ccchHHhHHHHHHHHHHhHhhhhHHHhHh----------hhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        726 VYGSIYAIADISYSLAYAIGPIVAGGIVD----------AIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       726 ~~g~a~g~~~~~~~~g~~~gp~~~g~l~~----------~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      .+|.++|+.++.+++|+.+|..+.+....          .-.+.+.|...++..++...+.+...
T Consensus       412 ~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~  476 (489)
T PRK10207        412 LMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMV  476 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999888765521          11256777777777666655544433

>TIGR00889 2A0110 nucleoside transporter

Probab=99.91  E-value=4.9e-22  Score=221.98  Aligned_cols=373  Identities=10%  Similarity=0.065  Sum_probs=243.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCc-hhHHHHHHHHHHHHHHH
Q psy17194        277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT-YQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~  355 (871)
                      .+.+..++....+....+.++.++++++|.+..++|++.+...++..+++++.|+++||+|+ |+.+  ..+..+.++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~--~~~~~~~~~~~   83 (418)
T TIGR00889         6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVY--AVCHFAGALLL   83 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH--HHHHHHHHHHH
Confidence            34566677777888888999999999999999999999999999999999999999999966 4433  45555555666


Q ss_pred             HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhh-hhh----ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        356 FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLG-YLV----DVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       356 ~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~-~~~----~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                      ....+.++.+.+.+.+++.+++.+...+...+... ...    +......|.+..|      .+|.+++|.++|.+....
T Consensus        84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~  157 (418)
T TIGR00889        84 FFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIEL  157 (418)
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccc
Confidence            66667777777777777777765544333333221 111    1111122344444      368889999998773222


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCc
Q psy17194        431 GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENK  510 (871)
Q Consensus       431 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (871)
                      +|. .|++.+++.++..++.+..++.++  +  +          +          +++ .+ .+   +.           
T Consensus       158 ~~~-~f~~~~~~~~~~~~~~~~~~e~~~--~--~----------~----------~~~-~~-~~---~~-----------  196 (418)
T TIGR00889       158 SNI-QLYITAGSSALLGVFALTLPDIPV--A--K----------S----------TAK-MS-IK---VM-----------  196 (418)
T ss_pred             hhH-HHHHHHHHHHHHHHHHhcCCCCCC--C--c----------c----------ccc-cC-HH---HH-----------
Confidence            233 355555544444333222221000  0  0          0          000 00 00   00           


Q ss_pred             CcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCccc
Q psy17194        511 QPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTV  590 (871)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  590 (871)
                                                                                                   ...
T Consensus       197 -----------------------------------------------------------------------------~~~  199 (418)
T TIGR00889       197 -----------------------------------------------------------------------------LGL  199 (418)
T ss_pred             -----------------------------------------------------------------------------hhh
Confidence                                                                                         000


Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCC--------ccchhhhhhccchhhhhhhhhhhhhhhcc
Q psy17194        591 PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTD--------NWKIGMIWLPAFFPHVFGVVITVKLAKLY  662 (871)
Q Consensus       591 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s--------~~~~gl~~~~~~~~~~i~~~~~g~l~d~~  662 (871)
                      ..++++|+|+++...+..++...........+|.|+++ .|.+        ....|+.+....+..+++.++.|++.||+
T Consensus       200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~  278 (418)
T TIGR00889       200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF  278 (418)
T ss_pred             hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            12457788888777777777666666666777888865 4544        35679999999999999999999999999


Q ss_pred             CchhhHHHHHHHHHHhhHHhhhcch-h---hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHH-HH
Q psy17194        663 PTYQWLMVAVGLVLEGLCCFIIPFS-T---SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-IS  737 (871)
Q Consensus       663 ~~~~~~~~~~g~~~~~~~l~~~~~~-~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~-~~  737 (871)
                      ++|+  .+..+.++.++++..+... .   +.+.+++..++.|++.+...+...   .+..+..|++.+|++.|+.+ ..
T Consensus       279 g~r~--~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~---~~i~~~~p~~~~g~~~g~~~~~~  353 (418)
T TIGR00889       279 GIKK--VMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGS---VFVEKEVPVHIRASAQGLFTLMC  353 (418)
T ss_pred             CcHH--HHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHCCHHHHHHHHHHHHHHH
Confidence            9988  5566666666665444332 1   123344556666666665443333   33444555888999999997 67


Q ss_pred             HHHHHhHhhhhHHHhHhhh------ChHHHHHHHHHHHHHHHHHHHHHhc
Q psy17194        738 YSLAYAIGPIVAGGIVDAI------GFTALNFLIAFMNILYAPVLIYLKN  781 (871)
Q Consensus       738 ~~~g~~~gp~~~g~l~~~~------g~~~~~~~~a~~~~~~~~~~~~~~~  781 (871)
                      .++|+.+||.+.|.+.|+.      ||+.+|.+.+++.+++++..+++.+
T Consensus       354 ~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~  403 (418)
T TIGR00889       354 NGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK  403 (418)
T ss_pred             HhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence            8899999999999999984      5899998888887777755555443

This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.

>PRK11902 ampG muropeptide transporter; Reviewed

Probab=99.91  E-value=1.6e-21  Score=217.78  Aligned_cols=370  Identities=14%  Similarity=0.086  Sum_probs=237.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-----CchhHHHHHHHHHHHHH
Q psy17194        279 SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-----PTYQWLMVAVGLVLEGL  353 (871)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~  353 (871)
                      ...++............+|.|++++ |+|.+++|++......  .+..+++|+++||+     ||||.++ ..+..+.++
T Consensus         5 ~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l-~~~~~~~~l   80 (402)
T PRK11902          5 LLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWL-LLTQVGLAA   80 (402)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHH-HHHHHHHHH
Confidence            3445556667777888899999885 9999999998766554  57889999999999     7776322 344444444


Q ss_pred             HHHHhhcc---hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-
Q psy17194        354 CCFIIPFS---TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA-  429 (871)
Q Consensus       354 ~~~~~~~~---~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~-  429 (871)
                      +...+.+.   .+.+.+++..++.++..+...+...+..   .+..|+++|+++.++...+..+|..+++.+.+.+.+. 
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~---~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~  157 (402)
T PRK11902         81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYS---TDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV  157 (402)
T ss_pred             HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc
Confidence            44444444   3455555544555555555544444443   3445568899999999999999999999999999886 


Q ss_pred             hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCC
Q psy17194        430 IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDEN  509 (871)
Q Consensus       430 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  509 (871)
                      .||+..|++.+++.++.....+..++.+++            +     .+    +  ++.    ++  +           
T Consensus       158 ~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~------------~-----~~----~--~~~----~~--~-----------  197 (402)
T PRK11902        158 LGWGNTYLLMAGLMLAGALTTLWAPEPEVP------------A-----RP----P--RSL----GE--A-----------  197 (402)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhcCCCccc------------c-----cc----c--chh----HH--H-----------
Confidence            599999999887665544332222110000            0     00    0  000    00  0           


Q ss_pred             cCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcc
Q psy17194        510 KQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHST  589 (871)
Q Consensus       510 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  589 (871)
                                                                                                    ..
T Consensus       198 ------------------------------------------------------------------------------~~  199 (402)
T PRK11902        198 ------------------------------------------------------------------------------VV  199 (402)
T ss_pred             ------------------------------------------------------------------------------HH
Confidence                                                                                          00


Q ss_pred             cchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccc-hhhhhhhhhhhhhhhccCchhhH
Q psy17194        590 VPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF-FPHVFGVVITVKLAKLYPTYQWL  668 (871)
Q Consensus       590 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~-~~~~i~~~~~g~l~d~~~~~~~~  668 (871)
                      .++++++|||.++...+..++..........+.+.++.+.+|+++.+.|+++...+ ++.+++.++.|++.||+++||. 
T Consensus       200 ~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~-  278 (402)
T PRK11902        200 GPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRS-  278 (402)
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH-
Confidence            12466889998887766666655544433345556777888999999999987655 4688899999999999998774 


Q ss_pred             HHHHHHHHHhhH---Hhhhcch-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhH
Q psy17194        669 MVAVGLVLEGLC---CFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAI  744 (871)
Q Consensus       669 ~~~~g~~~~~~~---l~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~  744 (871)
                       ...+..+..+.   +..+... ++.+.++.......+..+.......+.....+.   .+..++..+.++...++++.+
T Consensus       279 -l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~  354 (402)
T PRK11902        279 -LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCN---RSFSATQYALLSALASVGRVY  354 (402)
T ss_pred             -HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHH
Confidence             33333333322   2222332 233433333332222223332333344444444   233356678888888888887


Q ss_pred             hhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHH
Q psy17194        745 GPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       745 gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~  778 (871)
                      ++.++|.+.|+.||+..|.+.+.+++++.++.+.
T Consensus       355 ~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~  388 (402)
T PRK11902        355 VGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL  388 (402)
T ss_pred             HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence            7889999999999999999988888777655443

>PRK15075 citrate-proton symporter; Provisional

Probab=99.91  E-value=6.3e-22  Score=223.20  Aligned_cols=354  Identities=12%  Similarity=0.067  Sum_probs=221.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHH-Hhh-----HHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW-LPA-----FFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~-~~~-----~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      ........++.......+....|. +.++++.++.+.+... +..     .+...+++++.|+++||+|||+.+  ..+.
T Consensus        17 ~~~~~~~~~~~~~d~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l--~~~~   93 (434)
T PRK15075         17 ILRVTSGNFLEMFDFFLFGFYATA-IAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL--IVTL   93 (434)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH--HHHH
Confidence            344445555555565666666664 6667888776654332 221     222346789999999999999965  7777


Q ss_pred             HHHHHHHHHhhcchhhH--------HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQ--------MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGP  420 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~--------~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp  420 (871)
                      .+..++.++++++++.+        .+++.+++.|++.+...+...   ....+..|+++|++++++.+...++|..+++
T Consensus        94 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~  170 (434)
T PRK15075         94 SIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVS---VYLAEIATPGRKGFYTSWQSASQQVAVVFAA  170 (434)
T ss_pred             HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHH---HHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence            78888888888888766        357788999998887644443   3455666779999999999998888888888


Q ss_pred             HHHHHHH--------hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccc
Q psy17194        421 IVAGGIV--------DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAND  492 (871)
Q Consensus       421 ~l~g~l~--------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (871)
                      .+++.+.        +..|||+.|++.....    ++.++.++..++   +++..                + .+.+ . 
T Consensus       171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~----~~~~~~~~~~~e---~~~~~----------------~-~~~~-~-  224 (434)
T PRK15075        171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV----PFIFLIRRSLEE---TEEFL----------------A-RKHR-P-  224 (434)
T ss_pred             HHHHHHHHhCCHHHHhccchHHHHHHHHHHH----HHHHHHHHhcCC---CHHHH----------------H-hhhc-c-
Confidence            8887763        5679999998743321    112222211000   00000                0 0000 0 


Q ss_pred             ccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhc
Q psy17194        493 YKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVM  572 (871)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  572 (871)
                           +.                                                                         
T Consensus       225 -----~~-------------------------------------------------------------------------  226 (434)
T PRK15075        225 -----SM-------------------------------------------------------------------------  226 (434)
T ss_pred             -----cc-------------------------------------------------------------------------
Confidence                 00                                                                         


Q ss_pred             ccchhhhccCCCCCCcccchhhhccchhHHHH-HHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhh
Q psy17194        573 KPVKEQLNQKKPESHSTVPIWKLFMDPYIAVC-SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFG  651 (871)
Q Consensus       573 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~  651 (871)
                                      +..++++.++++.+.. ....++....++....+.|.|+++.+|++..+.+++..+..++.+++
T Consensus       227 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~  290 (434)
T PRK15075        227 ----------------REIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIW  290 (434)
T ss_pred             ----------------ccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                            0001223344444433 23334455667778888999999989999999999999999999999


Q ss_pred             hhhhhhhhhccCchhhHHHHHHHHHHh-hHHh---hhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcccccc
Q psy17194        652 VVITVKLAKLYPTYQWLMVAVGLVLEG-LCCF---IIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVY  727 (871)
Q Consensus       652 ~~~~g~l~d~~~~~~~~~~~~g~~~~~-~~l~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  727 (871)
                      .++.|+++||+++|+..  ..+..+.. .++.   +.....+........+..+++.+...+...+   +..|..|++.+
T Consensus       291 ~~~~g~l~Dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~e~~p~~~r  365 (434)
T PRK15075        291 LPIGGALSDRIGRRPVL--IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVV---ALTEVMPAEVR  365 (434)
T ss_pred             HHHHHHHHHHhcchHHH--HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHH---HHHHHCCCCcc
Confidence            99999999999988743  23322221 1111   1111222222222223333444433333333   33455558899


Q ss_pred             chHHhHHHH-HHHHHHhHhhhhHHHhHhhhChH
Q psy17194        728 GSIYAIADI-SYSLAYAIGPIVAGGIVDAIGFT  759 (871)
Q Consensus       728 g~a~g~~~~-~~~~g~~~gp~~~g~l~~~~g~~  759 (871)
                      +++.|+.+. .+.+++.++|.+.|.+.|+.|++
T Consensus       366 g~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~  398 (434)
T PRK15075        366 TAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK  398 (434)
T ss_pred             chheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence            999999644 44456889999999999998864

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.91  E-value=1.5e-21  Score=208.57  Aligned_cols=376  Identities=14%  Similarity=0.220  Sum_probs=272.0

Q ss_pred             hhHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         44 ILVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      ........+++..+..+...|..|.++++ .|+                           |.+++|.+.++..+...+.+
T Consensus         8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL---------------------------s~~~iG~i~s~~~~~~l~~q   60 (412)
T PF01306_consen    8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGL---------------------------SGTEIGIIFSAGSLFALLAQ   60 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------HHHHHHHHHHHHHHHHHTH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCC---------------------------CHHHHHHHHHHHHHHHHHHH
Confidence            34455666666777788889999999976 554                           99999999999999999999


Q ss_pred             hhhhHhhhhhCCchHHHHHHHHH--H-HHHHHHHhh----hhH-HHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHH
Q psy17194        123 PFSGALIDRIGYDLPMMIGLCIM--F-LSTALFACG----RSY-GVLFFARSLQGVGSAFADTSGLAMIADRFTEENERS  194 (871)
Q Consensus       123 ~~~G~l~Dr~Grr~~l~~~~~~~--~-i~~~l~~~a----~s~-~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~  194 (871)
                      |+.|.++||+|.||-++..+.+.  . ...+...+.    .|. ...+++-+..|+......|+..+++.+. .  ++.+
T Consensus        61 p~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~-s--r~~~  137 (412)
T PF01306_consen   61 PVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERV-S--RRNG  137 (412)
T ss_dssp             HHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHH-H--HHHS
T ss_pred             HhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH-H--HHhc
Confidence            99999999999766554433222  1 222222222    232 2333444455666666777878877774 2  4667


Q ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC--CCCCc---ccchhhh
Q psy17194        195 QALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK--PESHS---TVPIWKL  269 (871)
Q Consensus       195 ~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~  269 (871)
                      .-.|-.....++|.+++..++|.+.+. +-+..||+....+++..++..+..++.+++.+..+  ..+++   .++..++
T Consensus       138 feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  216 (412)
T PF01306_consen  138 FEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSL  216 (412)
T ss_dssp             S-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHH
T ss_pred             CCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHH
Confidence            778889999999999999999999874 56778888776666655554444443332211111  11111   2345678


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHH
Q psy17194        270 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLT---TDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAV  346 (871)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g---~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~  346 (871)
                      +|+|++|.+.+........+..+...++.|.+..++   .++...|.+.+...+..++.-.+..++.+|+|.|+.+  .+
T Consensus       217 ~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~L--ll  294 (412)
T PF01306_consen  217 FKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLL--LL  294 (412)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH--HH
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHH--HH
Confidence            899999998888777777777777778888876543   2345678888888899999999999999999999966  67


Q ss_pred             HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHHH
Q psy17194        347 GLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA-DISYSLAYAIGPIVAGG  425 (871)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~-~~~~~lg~~igp~l~g~  425 (871)
                      +..+..+-...++++++.+.+.+...+.++-....   ..+...++.+.++++..++...+. +...++|.++.+.+.|.
T Consensus       295 ag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~---lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~  371 (412)
T PF01306_consen  295 AGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLL---LVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY  371 (412)
T ss_dssp             HHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence            77788899999999999999999999999888877   566677777777778888888885 68899999999999999


Q ss_pred             HHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        426 IVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       426 l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      ++|+.|++..|++++.+.+...++..+..+
T Consensus       372 lyd~~G~~~tylimg~iv~~~~li~~f~l~  401 (412)
T PF01306_consen  372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLK  401 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             hHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence            999999999999999887776666555443

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>PRK11652 emrD multidrug resistance protein D; Provisional

Probab=99.91  E-value=1.8e-21  Score=217.04  Aligned_cols=343  Identities=11%  Similarity=0.123  Sum_probs=236.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS  361 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~  361 (871)
                      ..+.........+.+|.+ .+++|.|+.+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+..++.+.....
T Consensus        17 ~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~--~~~~~~~~~~~~~~~~~   93 (394)
T PRK11652         17 VAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI--LVGMSIFILGTLVALFA   93 (394)
T ss_pred             HHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH--HHHHHHHHHHHHHHHHH
Confidence            333344444455556654 466899999999999999999999999999999999999955  56666777777777777


Q ss_pred             hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHH
Q psy17194        362 TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  441 (871)
Q Consensus       362 ~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~  441 (871)
                      ++.+.+++.+++.|++.+...+.....   ..+..++++++++++..+....++..++|.+++.+.+..||++.|++.++
T Consensus        94 ~~~~~l~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~  170 (394)
T PRK11652         94 HSLTVLIAASAIQGLGTGVGGVMARTL---PRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLL  170 (394)
T ss_pred             ccHHHHHHHHHHHHhhhhHHHHHHHHH---HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHH
Confidence            888888888998888877653322222   23334558889999999999999999999999999999999999998876


Q ss_pred             HHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCC
Q psy17194        442 MNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGV  521 (871)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (871)
                      ..++......+..++++  +              +        ++ ++ .      +                       
T Consensus       171 ~~~~~~~~~~~~~~~~~--~--------------~--------~~-~~-~------~-----------------------  195 (394)
T PRK11652        171 LGAGVTFSMARWMPETR--P--------------A--------DA-RR-T------R-----------------------  195 (394)
T ss_pred             HHHHHHHHHHHhCCccC--c--------------c--------cc-ch-h------H-----------------------
Confidence            65544433322211000  0              0        00 00 0      0                       


Q ss_pred             cchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhH
Q psy17194        522 SNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYI  601 (871)
Q Consensus       522 ~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  601 (871)
                                                                                        .+.+++.++++|.+
T Consensus       196 ------------------------------------------------------------------~~~~~~~~~~~~~~  209 (394)
T PRK11652        196 ------------------------------------------------------------------VLASYRTLLSNRRF  209 (394)
T ss_pred             ------------------------------------------------------------------HHHHHHHHHcChHH
Confidence                                                                              00023556777777


Q ss_pred             HHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHH
Q psy17194        602 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  681 (871)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l  681 (871)
                      +...+..+........+....|.++++.+|+++.+.|+++....++.++++.+.+++.||+++ +......+.....+.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~  288 (394)
T PRK11652        210 NCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST-LMWQSVICCLLAGLLM  288 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            766555555565666666778889988899999999999999999999999999999999873 3222222222222222


Q ss_pred             hhhcc--hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhh
Q psy17194        682 FIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  756 (871)
Q Consensus       682 ~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~  756 (871)
                      +....  ..+.+.+....+..+++.+...+..+...   .+.. ++++|.+.++.+..+.+|+.+|+.++|.+.+..
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~-~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~  361 (394)
T PRK11652        289 WIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGA---MEPF-PYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG  361 (394)
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHH---Hhhc-cccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence            22221  22334445556666776676555444333   3433 467899999999999999999999999876653

>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins

Probab=99.91  E-value=1.1e-21  Score=219.29  Aligned_cols=418  Identities=13%  Similarity=0.113  Sum_probs=266.8

Q ss_pred             hhcchhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHH
Q psy17194        269 LFMDPYIAVCSGALLMANVALAF----LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV  344 (871)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~  344 (871)
                      .+++++++..+....+.....+.    ..+.++ ++..++|-+ ....|+.+...++..++.++.|+++|.+|||..+  
T Consensus        36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~-~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~--  111 (599)
T PF06609_consen   36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILP-YINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF--  111 (599)
T ss_pred             ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHH-HHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH--
Confidence            34556665554443333322221    123333 455566754 5567888888999999999999999999999855  


Q ss_pred             HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy17194        345 AVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  424 (871)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g  424 (871)
                      +.+.++..++.++++.+++...++.+..+.|+|.|... ......+++   .|.+.|+...++.....-.....+|.++.
T Consensus       112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl---~p~k~R~~~~~~~~~~~i~~~~~~~~ia~  187 (599)
T PF06609_consen  112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISEL---VPNKWRGLGLAIASIPFIITTWISPLIAQ  187 (599)
T ss_pred             HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHh---cccchhhhHhHHHHHHHHhhhcccHHHHH
Confidence            78888899999999999999999999999999987763 222233444   45588888777766655555557777777


Q ss_pred             HHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccccc
Q psy17194        425 GIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQET  504 (871)
Q Consensus       425 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (871)
                      .+..+.+|||.|++..+...+.+++.++..+..+++..+.+          +         ..     .++..       
T Consensus       188 ~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~----------~---------~s-----~~~~l-------  236 (599)
T PF06609_consen  188 LFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR----------K---------LS-----KREQL-------  236 (599)
T ss_pred             HhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc----------c---------Cc-----HHHHH-------
Confidence            77667789999999988776665554433321111100000          0         00     00000       


Q ss_pred             ccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHh--hcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccC
Q psy17194        505 SIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQ--FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK  582 (871)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  582 (871)
                                      ..-.+.+..+.++.+.--++|-.++.  .+.|+.+-++..+++...++..+.+.|....   .+
T Consensus       237 ----------------~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~---~~  297 (599)
T PF06609_consen  237 ----------------KELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGA---PK  297 (599)
T ss_pred             ----------------HHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhcc---CC
Confidence                            00113344333333333333333333  2466666655555555554444444432111   01


Q ss_pred             CCCCCcccchhhhccc-hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCcc---chhhhhhccchhhhhhhhhhhhh
Q psy17194        583 KPESHSTVPIWKLFMD-PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW---KIGMIWLPAFFPHVFGVVITVKL  658 (871)
Q Consensus       583 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~---~~gl~~~~~~~~~~i~~~~~g~l  658 (871)
                      +|..+     .++||+ |.+....+..++..+.++......|......|+-++.   ..++...+..++..++..+.|.+
T Consensus       298 ~Pl~P-----~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l  372 (599)
T PF06609_consen  298 DPLFP-----HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLL  372 (599)
T ss_pred             CCcCC-----HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHH
Confidence            22222     678998 4566666777778888888888889888888887764   67889999999999999999999


Q ss_pred             hhccCchhhHHHHHHHHHHhhHHhhhc--chhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHH
Q psy17194        659 AKLYPTYQWLMVAVGLVLEGLCCFIIP--FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADI  736 (871)
Q Consensus       659 ~d~~~~~~~~~~~~g~~~~~~~l~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~  736 (871)
                      ..++++-|+ .+.++..+..+++-.+.  -.++....+...++.|++.|....+.....+..++   ++..|+++|+..+
T Consensus       373 ~~~ir~~Kw-~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p---~~~ig~a~gL~~s  448 (599)
T PF06609_consen  373 FSKIRHIKW-QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVP---DEDIGTATGLTGS  448 (599)
T ss_pred             HHHccchhH-HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeC---chHHHHHHHHHHH
Confidence            988876665 44445544443333332  22333334455666667777776666666666666   7889999999999


Q ss_pred             HHHHHHhHhhhhHHHhH
Q psy17194        737 SYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       737 ~~~~g~~~gp~~~g~l~  753 (871)
                      +|.+|+++|..+...++
T Consensus       449 ~R~~GGsIg~aIy~~I~  465 (599)
T PF06609_consen  449 IRSIGGSIGYAIYNAIF  465 (599)
T ss_pred             HHHHhhHHHHHHHHHHH
Confidence            99999999998876544

Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].

>TIGR00896 CynX cyanate transporter

Probab=99.91  E-value=6.5e-22  Score=217.28  Aligned_cols=331  Identities=13%  Similarity=0.074  Sum_probs=232.5

Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP  370 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  370 (871)
                      ...+.+|. +++++|.+..+.+++.+.+.++..++.++.|+++||+|+|+.+  ..+..+..++.+.. ..++.+.+++.
T Consensus        18 ~~~~~lp~-l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~~~-~~~~~~~l~~~   93 (355)
T TIGR00896        18 SVGPLLPQ-IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSV--AAGLLLIAAGILIR-SAPGTALLFAG   93 (355)
T ss_pred             cCcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHH--HHHHHHHHHHHHHH-HhccHHHHHHH
Confidence            34455665 5667899999999999999999999999999999999999965  55665555666555 56777788888


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--hhhHHHHHHHHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--FTALNFLIAFMNILYAP  448 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--~~~~f~~~~~~~~~~~~  448 (871)
                      +++.|++.+...+....    ..++..+++|++++++.+....+|..+++.+.+.+.+..+  |++.|.+.++..++...
T Consensus        94 ~~~~g~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~  169 (355)
T TIGR00896        94 TALIGVGIAIINVLLPS----LIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL  169 (355)
T ss_pred             HHHHHHHHHHHhccchH----HHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence            88889888875333222    2233345789999999999999999999999999988753  88888776654433221


Q ss_pred             HHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhc
Q psy17194        449 VLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKAS  528 (871)
Q Consensus       449 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  528 (871)
                        .+.++.++++             ++            ++..      .                              
T Consensus       170 --~~~~~~~~~~-------------~~------------~~~~------~------------------------------  186 (355)
T TIGR00896       170 --AWIPQVRRRV-------------AA------------NQTT------T------------------------------  186 (355)
T ss_pred             --HHhhhhcccc-------------CC------------CCCC------C------------------------------
Confidence              1222110000             00            0000      0                              


Q ss_pred             cccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHH
Q psy17194        529 APSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGAL  608 (871)
Q Consensus       529 ~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  608 (871)
                                                                                  ..+.++++|+|.++...+..
T Consensus       187 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~  206 (355)
T TIGR00896       187 ------------------------------------------------------------RLTPVRIWRSPLAWQVTVFF  206 (355)
T ss_pred             ------------------------------------------------------------CCCCchhhcCHhHHHHHHHH
Confidence                                                                        00124567888887766666


Q ss_pred             HHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchh
Q psy17194        609 LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST  688 (871)
Q Consensus       609 ~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~  688 (871)
                      ++....++....++|.|+++ +|+++.+.|++.+...++.++++++.|++.||++.+|. ....+..+.+++++.+.+..
T Consensus       207 ~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~  284 (355)
T TIGR00896       207 GLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRG-IVAVLAVLQLVGLCGLLFAP  284 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH-HHHHHHHHHHHHHHHHHHhh
Confidence            67777778888899999976 69999999999999999999999999999999965442 44455555555555444433


Q ss_pred             hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc-cccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhCh
Q psy17194        689 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  758 (871)
Q Consensus       689 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~  758 (871)
                      +...+ ...+++|++.+...+...+..   .+.. ++++++.+.|+.+...++++.+||.+.|.+.|+.|.
T Consensus       285 ~~~~~-~~~~l~g~~~g~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~  351 (355)
T TIGR00896       285 MHGLW-AWALVLGLGQGGAFPLALTLI---GLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN  351 (355)
T ss_pred             hhHHH-HHHHHHHHhhhhHhHHHHHHH---HHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            22222 134556776666554333322   2222 256778999999999999999999999999998873

This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.

>PRK10077 xylE D-xylose transporter XylE; Provisional

Probab=99.91  E-value=2.2e-22  Score=230.75  Aligned_cols=375  Identities=10%  Similarity=0.024  Sum_probs=223.4

Q ss_pred             CCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc------------hhhHHHHHHHH
Q psy17194        305 TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS------------TSYQMLMLPIC  372 (871)
Q Consensus       305 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~~~  372 (871)
                      +.+..+.+++.+.+.++..+++++.|+++||+|||+.+  ..+..+..++.+..++.            ...+.+++.++
T Consensus        51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~--~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~  128 (479)
T PRK10077         51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL--KIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRI  128 (479)
T ss_pred             cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHH
Confidence            78889999999999999999999999999999999966  55556666665554431            22456678899


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------hhhChhhHHHHHHHHHH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV--------DAIGFTALNFLIAFMNI  444 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~--------~~~g~~~~f~~~~~~~~  444 (871)
                      +.|++.+...+.....   +.+..|+++||+++++.+....+|..+++.+++.+.        +..|||+.|++.++..+
T Consensus       129 l~G~~~g~~~~~~~~~---i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~  205 (479)
T PRK10077        129 IGGIGVGLASMLSPMY---IAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPAL  205 (479)
T ss_pred             HHhhhHhHHhhHHHHH---HHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHH
Confidence            9999999885544444   455566699999999999999999999887776553        35689999998877666


Q ss_pred             HHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcch
Q psy17194        445 LYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNP  524 (871)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (871)
                      +..+..+++++..+....+.+.++..       ....+.....+    .+...+.                         
T Consensus       206 ~~~~~~~~l~~s~~~l~~~~~~~~~~-------~~~~~~~~~~~----~~~~~~~-------------------------  249 (479)
T PRK10077        206 LFLMLLYFVPETPRYLMSRGKQEQAE-------GILRKIMGNTL----ATQALQE-------------------------  249 (479)
T ss_pred             HHHHHHHcCCCCcHHHHHcCCHHHHH-------HHHHHHcCChh----HHHHHHH-------------------------
Confidence            65544444433211000000000000       00000000000    0000000                         


Q ss_pred             hhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHH-
Q psy17194        525 FKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAV-  603 (871)
Q Consensus       525 ~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-  603 (871)
                                                                     .+   +..+.++.. .  .++..+ ....+.. 
T Consensus       250 -----------------------------------------------~~---~~~~~~~~~-~--~~~~~~-~~~~~~~~  275 (479)
T PRK10077        250 -----------------------------------------------IK---HSLDHGRKT-G--GKLLMF-GVGVIVIG  275 (479)
T ss_pred             -----------------------------------------------HH---HHHHHhhhh-h--hhhcch-hHHHHHHH
Confidence                                                           00   000000000 0  000100 0001111 


Q ss_pred             HHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhh
Q psy17194        604 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  683 (871)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~  683 (871)
                      .....+.....++....+.|.++ +..|++....++...+.++..+++.++.+++.||+++|+  ....+..+.+++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~--~~i~~~~~~~v~~~~  352 (479)
T PRK10077        276 VMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP--LQIIGALGMAIGMFS  352 (479)
T ss_pred             HHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChH--HHHHhHHHHHHHHHH
Confidence            11112222223334445567666 457998888888888889999999999999999999887  555666666666555


Q ss_pred             hcch--hh-hH-HHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHH------hH
Q psy17194        684 IPFS--TS-YQ-MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG------IV  753 (871)
Q Consensus       684 ~~~~--~~-~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~------l~  753 (871)
                      +...  .+ .. .....++.++++.+....+.  ......+..|++.|+++.|+.+...++|+.+++.+.+.      +.
T Consensus       353 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~  430 (479)
T PRK10077        353 LGTAFYTQAPGIVALLSMLFYVAAFAMSWGPV--CWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLV  430 (479)
T ss_pred             HHHHHhcCcccHHHHHHHHHHHHHHhccccch--hHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchh
Confidence            4321  11 11 22233444444443322121  12333344457889999999999999999998766654      34


Q ss_pred             hhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        754 DAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       754 ~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +..++.+.|++.++++++++.+.+++
T Consensus       431 ~~~~~~~~~~~~~~~~~~~~~~~~~~  456 (479)
T PRK10077        431 AHFHNGFSYWIYGCMGVLAALFMWKF  456 (479)
T ss_pred             hhccCccHHHHHHHHHHHHHHHHHhc
Confidence            67888888888887777666554444

>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial

Probab=99.91  E-value=4.6e-21  Score=217.12  Aligned_cols=437  Identities=13%  Similarity=0.070  Sum_probs=280.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh-cCchhHHHHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-YPTYQWLMVAVGLVL  350 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~  350 (871)
                      .++.+....++..++++...++++.|++++  +|++..+++++.+.+.++..++.+++|+++|| +|||+.+  ..+..+
T Consensus        11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l--~~~~~~   88 (475)
T TIGR00924        11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTM--VLGGIV   88 (475)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHH--HHHHHH
Confidence            445556666666788889999999999887  89999999999999999999999999999999 8999955  777778


Q ss_pred             HHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        351 EGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       351 ~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                      .+++.+++++.++.+.+++.+.+.++|.+...+...+...+..+..++++|+++.++.+...++|.++||.+++++.++.
T Consensus        89 ~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~  168 (475)
T TIGR00924        89 LMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY  168 (475)
T ss_pred             HHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            88888888887777777778888888888776666666666555422245888999999999999999999999999999


Q ss_pred             ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCc
Q psy17194        431 GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENK  510 (871)
Q Consensus       431 g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  510 (871)
                      ||++.|++.++..+++.+...+.++..++.+.++       ++    .   ..++.+..     .  ..           
T Consensus       169 g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~----~---~~~~~~~~-----~--~~-----------  216 (475)
T TIGR00924       169 GYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVP-------DP----L---SGQGKTYG-----K--LL-----------  216 (475)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHcccccccCCCCC-------CC----c---chhhhhhH-----H--HH-----------
Confidence            9999999987655555444433332111000000       00    0   00000000     0  00           


Q ss_pred             CcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCccc
Q psy17194        511 QPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTV  590 (871)
Q Consensus       511 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  590 (871)
                                  ... .     +.+......+.... ..+..... ......  ..... ..+. ..     ++...   
T Consensus       217 ------------~~~-~-----~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~--~~~~~-~~~~-~~-----~~~~~---  264 (475)
T TIGR00924       217 ------------LAL-L-----AALALVFFCAWLMH-HVVIANIL-LMTVTL--AVIIF-FFRL-AF-----KPRLD---  264 (475)
T ss_pred             ------------HHH-H-----HHHHHHHHHHHHHh-ccHHHHHH-HHHHHH--HHHHH-HHHH-HH-----hccCC---
Confidence                        000 0     00000000000000 00000000 000000  01111 1100 00     00000   


Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccc----hhhhhhccchhhhhhhhhhhh----hhhc-
Q psy17194        591 PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK----IGMIWLPAFFPHVFGVVITVK----LAKL-  661 (871)
Q Consensus       591 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~----~gl~~~~~~~~~~i~~~~~g~----l~d~-  661 (871)
                       ..+-.|...+....+...+.+..+....+.+|++.++..+.+...    .+++....++..++..++..+    +.|| 
T Consensus       265 -~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~  343 (475)
T TIGR00924       265 -AVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKG  343 (475)
T ss_pred             -HHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence             011112234444555556666677777888999887765554333    778888888888888777554    4444 


Q ss_pred             cCchhhHHHHHHHHHHhhHHhhhcc---------hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHh
Q psy17194        662 YPTYQWLMVAVGLVLEGLCCFIIPF---------STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYA  732 (871)
Q Consensus       662 ~~~~~~~~~~~g~~~~~~~l~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g  732 (871)
                      .+.+...-+.+|+++.+++++.+..         ..+.+++++..+..++|.....+..........+   ++.+|+.+|
T Consensus       344 ~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP---~~~~g~~~g  420 (475)
T TIGR00924       344 KDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAP---QRLMGQMLG  420 (475)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCC---HHHHHHHHH
Confidence            2223323347788888888776642         3567778889999999999887766665555554   788999999


Q ss_pred             HHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        733 IADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       733 ~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      ++.....+|..+|+.+.....+..++.+.|...+.++++...+.++..
T Consensus       421 ~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  468 (475)
T TIGR00924       421 MWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV  468 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998887877888888888877777665554443

The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.

>TIGR00885 fucP L-fucose:H+ symporter permease

Probab=99.90  E-value=1e-20  Score=210.47  Aligned_cols=360  Identities=11%  Similarity=0.039  Sum_probs=243.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      +..++...+...+......+..|. +++++|.+..+.|++.+.+.++..++.++.|++.||+|+|+.+  ..+..+.+++
T Consensus         5 ~~~~~~~f~~~G~~~~~~~~l~~~-~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~--~~g~~l~~~g   81 (410)
T TIGR00885         5 FALITSLFALWGFANDITNPMVPQ-FQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGI--LLGLFLYALG   81 (410)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH--HHHHHHHHHH
Confidence            444555555556565566677766 5788999999999999999999999999999999999999955  6777777777


Q ss_pred             HHHhhc---chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---
Q psy17194        355 CFIIPF---STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD---  428 (871)
Q Consensus       355 ~~~~~~---~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~---  428 (871)
                      .+++..   .++++.+++.+++.|+|.+...+...+......   +++++++..++.+...++|..++|.+++.+..   
T Consensus        82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~  158 (410)
T TIGR00885        82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG---PESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNL  158 (410)
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC---CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            766433   356788888899999999988666666655544   44788999999999999999999999988753   


Q ss_pred             -----------------------hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccc
Q psy17194        429 -----------------------AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQD  485 (871)
Q Consensus       429 -----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  485 (871)
                                             ..+|++.|++.+++.++..++..+.+. ++.   ++              +    ++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~-p~~---~~--------------~----~~  216 (410)
T TIGR00885       159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKM-PAL---NH--------------S----DA  216 (410)
T ss_pred             ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC---Cc--------------c----cc
Confidence                                   246999998888766554433322110 000   00              0    00


Q ss_pred             cccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHH
Q psy17194        486 RQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDG  565 (871)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~  565 (871)
                        + +.      +.                                                                  
T Consensus       217 --~-~~------~~------------------------------------------------------------------  221 (410)
T TIGR00885       217 --K-QI------SF------------------------------------------------------------------  221 (410)
T ss_pred             --c-cc------cc------------------------------------------------------------------
Confidence              0 00      00                                                                  


Q ss_pred             HHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc-CCCccchhhhhhcc
Q psy17194        566 FMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-TTDNWKIGMIWLPA  644 (871)
Q Consensus       566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-g~s~~~~gl~~~~~  644 (871)
                                             ..+.++++|+|.++...+..++.........++++.|+++.. +.+....+......
T Consensus       222 -----------------------~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~  278 (410)
T TIGR00885       222 -----------------------SASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGA  278 (410)
T ss_pred             -----------------------hhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence                                   001245778888888777777766666677788999986532 44544455555555


Q ss_pred             chhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccc
Q psy17194        645 FFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYV  724 (871)
Q Consensus       645 ~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  724 (871)
                      ..+..+|+++++++.||+++||  +..+...+..+++++..+.++.. ....++..+++++..++...+......+   +
T Consensus       279 ~~~~~vGR~~~~~l~~r~~~~~--~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g---~  352 (410)
T TIGR00885       279 MVIFFISRFIGTWLISYLAAHK--VLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLG---Q  352 (410)
T ss_pred             HHHHHHHHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhh---h
Confidence            5777899999999999998877  44455555555554444433322 2455556666667766655555555544   3


Q ss_pred             cccchHHhHHHHHHHHHHhHhhhhHHHhHhhh------ChHHHHHHHHHH
Q psy17194        725 SVYGSIYAIADISYSLAYAIGPIVAGGIVDAI------GFTALNFLIAFM  768 (871)
Q Consensus       725 ~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~------g~~~~~~~~a~~  768 (871)
                      +....+.++...  .+|++++|.+.|.+.|..      +++.+|.+...+
T Consensus       353 ~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~  400 (410)
T TIGR00885       353 DTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC  400 (410)
T ss_pred             hhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence            333333343333  399999999999999964      477777654433

This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.

>TIGR00883 2A0106 metabolite-proton symporter

Probab=99.90  E-value=2.8e-21  Score=215.60  Aligned_cols=337  Identities=11%  Similarity=0.147  Sum_probs=221.8

Q ss_pred             CCchhHHHHHHh-----hHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhH--------HHHHHHH
Q psy17194        306 TDNWKIGMIWLP-----AFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQ--------MLMLPIC  372 (871)
Q Consensus       306 ~s~~~~g~~~~~-----~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~  372 (871)
                      .++.+.+...+.     ..++..++.++.|+++||+|||+.+  ..+..+..++.+++++.++.+        .+++.++
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  104 (394)
T TIGR00883        27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTL--VITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARL  104 (394)
T ss_pred             CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHH--HHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHH
Confidence            444555554432     2334456889999999999999965  677777788888887777654        3667788


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH--------hhhChhhHHHHHHHHHH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV--------DAIGFTALNFLIAFMNI  444 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~--------~~~g~~~~f~~~~~~~~  444 (871)
                      +.|++.+...+.....   +.+..++++|++..++.+....+|..+++.+.+.+.        +..||++.|++.+++.+
T Consensus       105 l~G~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~  181 (394)
T TIGR00883       105 IQGFSLGGEWGGAALY---LAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVL  181 (394)
T ss_pred             HHHhhccccccccHHH---hhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHH
Confidence            8888877764443333   445556799999999999999999999998887664        35689999887665544


Q ss_pred             HHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcch
Q psy17194        445 LYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNP  524 (871)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (871)
                      +...+....++.    +. .+.++                + ++         +                          
T Consensus       182 ~~~~~~~~~~~~----~~-~~~~~----------------~-~~---------~--------------------------  204 (394)
T TIGR00883       182 IGLYLRRNLEET----PV-FEKAQ----------------E-KH---------K--------------------------  204 (394)
T ss_pred             HHHHHHHhcCCC----hh-HHHHH----------------h-cc---------c--------------------------
Confidence            433222111110    00 00000                0 00         0                          


Q ss_pred             hhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchh--HH
Q psy17194        525 FKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPY--IA  602 (871)
Q Consensus       525 ~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~  602 (871)
                                                                                    +...++++++++++  ++
T Consensus       205 --------------------------------------------------------------~~~~~~~~~~~~~~~~~~  222 (394)
T TIGR00883       205 --------------------------------------------------------------KKRGPIRETLTKHRKPFL  222 (394)
T ss_pred             --------------------------------------------------------------cccCCHHHHHHhchHHHH
Confidence                                                                          00001234444444  66


Q ss_pred             HHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHH-
Q psy17194        603 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC-  681 (871)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l-  681 (871)
                      ......++.....+....++|.|+++.+|++..+.+.......++.+++.++.|++.||+++|+... ..+......++ 
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~  301 (394)
T TIGR00883       223 LGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLI-IFTVLAALLAVP  301 (394)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH-HHHHHHHHHHHH
Confidence            6666666777777788889999998889999999999999999999999999999999999877422 12222222221 


Q ss_pred             hhhc--chhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH-HHHHHHHHHhHhhhhHHHhHhhhC-
Q psy17194        682 FIIP--FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYSLAYAIGPIVAGGIVDAIG-  757 (871)
Q Consensus       682 ~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~-~~~~~~~g~~~gp~~~g~l~~~~g-  757 (871)
                      +...  ..++.+..+...+..+++.+...++..+...+.   .|++.++++.|+ ++....+|+.++|.+.|.+.|+.| 
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~  378 (394)
T TIGR00883       302 LLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPEL---FPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGD  378 (394)
T ss_pred             HHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHh---CCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCc
Confidence            1111  123444445555666666665555554444444   447888999998 456677899999999999999998 


Q ss_pred             hHHHHHHHHHHHH
Q psy17194        758 FTALNFLIAFMNI  770 (871)
Q Consensus       758 ~~~~~~~~a~~~~  770 (871)
                      |+..++..+++.+
T Consensus       379 ~~~~~~~~~~~~l  391 (394)
T TIGR00883       379 WYAIGYYLAALAL  391 (394)
T ss_pred             chhHHHHHHHHHH
Confidence            7776665554443

This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.

>TIGR00887 2A0109 phosphate:H+ symporter

Probab=99.90  E-value=3.3e-21  Score=221.36  Aligned_cols=393  Identities=12%  Similarity=0.015  Sum_probs=230.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh----hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        280 GALLMANVALAFLEPTISLWIEDN----LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      +..+........+....+..-.+.    .+.+..+.+++.+...++.+++.++.|+++||+|||+.+  ..+.++..++.
T Consensus        23 ~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~--~~~~~~~~v~~  100 (502)
T TIGR00887        23 VGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY--GMELIIMIIAT  100 (502)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHH
Confidence            333444444444444445432221    234455678899999999999999999999999999965  66666666666


Q ss_pred             HHhhcchh------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-
Q psy17194        356 FIIPFSTS------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-  428 (871)
Q Consensus       356 ~~~~~~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~-  428 (871)
                      ++.+++.+      .+.+++.+++.|++.+...+...   .++.+..|+++||++.++.+....+|..+++.+...+.. 
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~---~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~  177 (502)
T TIGR00887       101 VASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSA---IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAG  177 (502)
T ss_pred             HHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHH---HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            66665544      56788999999999998744443   445556677999999999999999999999988876543 


Q ss_pred             ----------------------hhChhhHHHHHHHHHHHHHHHHHHHhhcccCC---CCc-hhhhh-ccCCCcccccCcc
Q psy17194        429 ----------------------AIGFTALNFLIAFMNILYAPVLIYLKNIYDFK---PFE-NEANI-LMADPPKKEYQTY  481 (871)
Q Consensus       429 ----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~-~~~~~~~~~~~~~  481 (871)
                                            ..+||+.+.+.++..++..+..+++++..+.-   .++ ++..+ ..+....+     
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~-----  252 (502)
T TIGR00887       178 FKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVK-----  252 (502)
T ss_pred             hccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccc-----
Confidence                                  13799999877766665555555555533221   000 00000 00000000     


Q ss_pred             cccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHH
Q psy17194        482 TMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVS  561 (871)
Q Consensus       482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~  561 (871)
                       .++  +. +      +.+         +.++. .+.                                           
T Consensus       253 -~~~--~~-~------~~~---------~~~~~-~~~-------------------------------------------  269 (502)
T TIGR00887       253 -IEA--EP-D------EVE---------KASTA-VEV-------------------------------------------  269 (502)
T ss_pred             -ccc--Cc-c------ccc---------chhcc-ccc-------------------------------------------
Confidence             000  00 0      000         00000 000                                           


Q ss_pred             HHHHHHHHHhcccchhhhccCCCCCCcccchhhhccc-------hhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCc
Q psy17194        562 LLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD-------PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDN  634 (871)
Q Consensus       562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~  634 (871)
                                                .+.++++++++       +..+......++..+.+|+...+.|.+++ ..|++.
T Consensus       270 --------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~  322 (502)
T TIGR00887       270 --------------------------PKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSP  322 (502)
T ss_pred             --------------------------hhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCC
Confidence                                      00012233321       11222222334445566777778899985 468876


Q ss_pred             cchhh------------hhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchh----hhHHHHHHHH
Q psy17194        635 WKIGM------------IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST----SYQMLMLPIC  698 (871)
Q Consensus       635 ~~~gl------------~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~----~~~~~~~~~~  698 (871)
                      .+.+.            ......++.+++.++.+++.||+|||+  ...++..+.+++++.+....    +...+....+
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~--~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  400 (502)
T TIGR00887       323 PAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKP--IQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVL  400 (502)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh--HHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence            54332            122334556668888999999999988  44455555555544443211    1111111111


Q ss_pred             HHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhh----------hChHHHHHHHHHH
Q psy17194        699 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA----------IGFTALNFLIAFM  768 (871)
Q Consensus       699 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~----------~g~~~~~~~~a~~  768 (871)
                      ...++.....+   ....+..|.+|.+.|+++.|+.+.+..+|++++|.+.+.+.+.          .++...|.+.+++
T Consensus       401 ~~~~~~~~~~~---~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~  477 (502)
T TIGR00887       401 AQFFANFGPNA---TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALF  477 (502)
T ss_pred             HHHHHhcCCCc---hhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHH
Confidence            11111111111   1223345666688999999999999999999999999999884          4556678888877


Q ss_pred             HHHHHHHHH
Q psy17194        769 NILYAPVLI  777 (871)
Q Consensus       769 ~~~~~~~~~  777 (871)
                      ++++.+..+
T Consensus       478 ~~~~~i~~~  486 (502)
T TIGR00887       478 MFLGILFTL  486 (502)
T ss_pred             HHHHHHHhe
Confidence            777655443

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).

>PRK09669 putative symporter YagG; Provisional

Probab=99.90  E-value=1.1e-20  Score=213.89  Aligned_cols=328  Identities=13%  Similarity=0.093  Sum_probs=231.8

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhh----hCCch-HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHH
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDR----IGYDL-PMMIGLCIMFLSTALFACGRS------YGVLFFARSLQG  169 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~s------~~~l~~~r~l~G  169 (871)
                      ++++.++|.+.++..+..++..|+.|.++||    +|||| .++.+.+..+++..+....++      +..+++..++.+
T Consensus        41 gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~  120 (444)
T PRK09669         41 GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLS  120 (444)
T ss_pred             CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence            4599999999999999999999999999999    78754 565677777777766555442      456666777778


Q ss_pred             hhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-------hCChhHHHHHHHHHHHHHHHH
Q psy17194        170 VGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF-------AGKEIPFLILAFVSLLDGFML  242 (871)
Q Consensus       170 ~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~-------~gwr~~f~~~~~~~l~~~i~~  242 (871)
                      .+.........++.+|+..++++|.+..++......+|..+++.+...+...       .+|+..+.+.+++.++..+..
T Consensus       121 ~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~  200 (444)
T PRK09669        121 LVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCC  200 (444)
T ss_pred             HHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence            7777777778899999865668999999999998899888887765544432       368888888888877766666


Q ss_pred             HHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhH
Q psy17194        243 LLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPH  322 (871)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~  322 (871)
                      ++..+|.+++.  ++++.+.....+.++|||.++.++...++..............|.+..++ ++...+.+.....+..
T Consensus       201 ~~~~~e~~~~~--~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~  277 (444)
T PRK09669        201 FFMTKERYTPE--VDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAG  277 (444)
T ss_pred             hCCeEEecCCC--CcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHH
Confidence            55555532211  11112223456778899998888777666655555444444444443333 3334445555566777


Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHHHHH-HHHHhhc-chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc----
Q psy17194        323 VFGVVITVKLAKLYPTYQWLMVAVGLVLEGL-CCFIIPF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----  396 (871)
Q Consensus       323 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~----  396 (871)
                      +++.++.++++||+|+|+.+  ..+..+..+ +..+... .++.+.+++..++.+++.+...+...++.++..|.-    
T Consensus       278 ii~~~~~~~l~~r~gk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~  355 (444)
T PRK09669        278 LFGALLSERLLGKFDRVRAF--KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRS  355 (444)
T ss_pred             HHHHHHHHHHHHHhChHHHH--HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Confidence            88889999999999998865  333333332 2212222 345666666777889998888777778888877631    


Q ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        397 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       397 ~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      ..+..|..+|..++...+|.++|+.++|.+.+..||.
T Consensus       356 G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~  392 (444)
T PRK09669        356 GRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV  392 (444)
T ss_pred             CcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            1234478899999999999999999999999988873

>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated

Probab=99.89  E-value=6e-21  Score=242.71  Aligned_cols=381  Identities=10%  Similarity=0.015  Sum_probs=256.3

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc--hhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDN--WKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  345 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~  345 (871)
                      ..++++.+..++...++..+........+..++...++.+.  ...+++.+++.++..++++++|+++||+|||+++  .
T Consensus         4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l--~   81 (1146)
T PRK08633          4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVI--R   81 (1146)
T ss_pred             chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHH--H
Confidence            35667777777777777666665555555555555566543  3468888899999999999999999999999965  4


Q ss_pred             HHHHHHHHHH---HHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy17194        346 VGLVLEGLCC---FIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  422 (871)
Q Consensus       346 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l  422 (871)
                      .+.++..+..   .+.....+++.+++.+++.|++.+...+.....+.   +..++++|++++|+.+.+..+|.++|+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~---~~~~~~~r~~~~~~~~~~~~ig~~lg~~l  158 (1146)
T PRK08633         82 IVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIP---ELVGKENLSRANGLLEAFTIVAILAGTAL  158 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhH---HhcCcccchhhhhHHHHHHHHHHHHHHHH
Confidence            4433322222   22334467888888999999999887555555444   44556999999999999999999999999


Q ss_pred             HHHHHhh--------hC-hhhHHHHHHHHHHHHH-HHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccc
Q psy17194        423 AGGIVDA--------IG-FTALNFLIAFMNILYA-PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVAND  492 (871)
Q Consensus       423 ~g~l~~~--------~g-~~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  492 (871)
                      ++++.+.        .+ |.+.+.+..+...+.. ++.+..++......             ..       .+ +...  
T Consensus       159 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-------~~-~~~~--  215 (1146)
T PRK08633        159 FSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAP-------------EV-------FD-KKKY--  215 (1146)
T ss_pred             HHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCc-------------cc-------cc-cccc--
Confidence            9999886        23 3333333332222222 22222211000000             00       00 0000  


Q ss_pred             ccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhc
Q psy17194        493 YKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVM  572 (871)
Q Consensus       493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  572 (871)
                        .  ..                                                                         
T Consensus       216 --~--~~-------------------------------------------------------------------------  218 (1146)
T PRK08633        216 --L--FP-------------------------------------------------------------------------  218 (1146)
T ss_pred             --c--cH-------------------------------------------------------------------------
Confidence              0  00                                                                         


Q ss_pred             ccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCcc-chhhhhhccchhhhhh
Q psy17194        573 KPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNW-KIGMIWLPAFFPHVFG  651 (871)
Q Consensus       573 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~-~~gl~~~~~~~~~~i~  651 (871)
                                   .....++..++++|.++...+..++.+...+.+..++|.|+++.+|++.. ..|++++..+++.+++
T Consensus       219 -------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g  285 (1146)
T PRK08633        219 -------------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIG  285 (1146)
T ss_pred             -------------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHH
Confidence                         00001235677888888877777777777777888999999999999999 9999999999999999


Q ss_pred             hhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHH
Q psy17194        652 VVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIY  731 (871)
Q Consensus       652 ~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~  731 (871)
                      +++.|++.||+++++  .+.++.++.+++++++.+..+.+.+++.++++|++.+...++..+......   +++.+|+++
T Consensus       286 ~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---p~~~rg~~~  360 (1146)
T PRK08633        286 SLLAGRLSGRHIELG--LVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRA---PEKELGKVL  360 (1146)
T ss_pred             HHHHHHHhCCceEcc--chhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC---Cccchhhhh
Confidence            999999999998877  455666666666666666566666666677777777766555444444443   488899999


Q ss_pred             hHHHHHHHHHHhHhhhhHHHhHh-hhChHHHHHHHHHHHHH
Q psy17194        732 AIADISYSLAYAIGPIVAGGIVD-AIGFTALNFLIAFMNIL  771 (871)
Q Consensus       732 g~~~~~~~~g~~~gp~~~g~l~~-~~g~~~~~~~~a~~~~~  771 (871)
                      |++++++++|+.+++.+++.+.. .+++...+.+.+.+.++
T Consensus       361 ~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  401 (1146)
T PRK08633        361 AANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI  401 (1146)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence            99999999999988888776644 23444555555544433

>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter

Probab=99.89  E-value=2.6e-21  Score=219.19  Aligned_cols=351  Identities=14%  Similarity=0.178  Sum_probs=236.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh----cCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        285 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL----YPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       285 ~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      .+........+++.|+.+.+|.++.++|++.+...+...+..++.|+++||    +||||.++ ..+....+++.+++..
T Consensus        11 ~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i-~~~~~~~~i~~~~~~~   89 (437)
T TIGR00792        11 NNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWL-LIGAIPFSIVLVLLFT   89 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhH-HHhHHHHHHHHHHHHh
Confidence            344556667788888999999999999999999999999999999999998    57766443 4454555555555544


Q ss_pred             chh------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh------
Q psy17194        361 STS------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD------  428 (871)
Q Consensus       361 ~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~------  428 (871)
                      .++      ....++..++.+++.+.......+...++.+  ++++|++..+..+....+|..+++.+.+.+..      
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~--~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~  167 (437)
T TIGR00792        90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITL--DPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGD  167 (437)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            432      2233444455566655543333333333332  35889999999998888988888877776653      


Q ss_pred             -hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        429 -AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       429 -~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                       ..||++.+.+.+++.++...+.++..++++  +          +.+         ++.+++     .            
T Consensus       168 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~--~----------~~~---------~~~~~~-----~------------  209 (437)
T TIGR00792       168 DKFGWFMFALVLALIGVVSLIICFFGTKERY--S----------EIP---------KNIEKK-----L------------  209 (437)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHcCCEecC--C----------CCC---------cccccC-----C------------
Confidence             357888888887776655444332211000  0          000         000000     0            


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                     +
T Consensus       210 -------------------------------------------------------------------------------~  210 (437)
T TIGR00792       210 -------------------------------------------------------------------------------S  210 (437)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      .+..++.+++||+++...+..++.....+......+.|.+..++ ++...+.+.....++.+++.++.+++.||+++|+ 
T Consensus       211 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~-  288 (437)
T TIGR00792       211 LKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI-  288 (437)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-
Confidence            00124668899999888877777777777666666666665666 5566777777778999999999999999999887 


Q ss_pred             HHHHHHHHHHhhHHhhhcch-hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHHHHHHH
Q psy17194        668 LMVAVGLVLEGLCCFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISYSLAY  742 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~~~~g~  742 (871)
                       ....+..+.+++++.+.+. ++.+.+++..++.+++.+...+...+...+.+|..    ++++.|.+.|++|++..+|+
T Consensus       289 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~  367 (437)
T TIGR00792       289 -LFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQ  367 (437)
T ss_pred             -HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHH
Confidence             4556666655555544332 34444555666677777776666666666666532    25568999999999999999


Q ss_pred             hHhhhhHHHhHhhhCh
Q psy17194        743 AIGPIVAGGIVDAIGF  758 (871)
Q Consensus       743 ~~gp~~~g~l~~~~g~  758 (871)
                      .+|+.+.|.+.+..||
T Consensus       368 ~lg~~i~g~ll~~~G~  383 (437)
T TIGR00792       368 ALAGFLVGLILGIIGY  383 (437)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999988776

GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.

>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family

Probab=99.89  E-value=3e-20  Score=206.74  Aligned_cols=368  Identities=8%  Similarity=0.003  Sum_probs=230.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHH--HhhHHhHHHHHHHH-HHHHhhcCchhHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW--LPAFFPHVFGVVIT-VKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~--~~~~~~~~~~~~~~-g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      ..+...++..........+.+|.|+++. |.|..++|+..  ....+...+..++. ++..||+||||.+++........
T Consensus         4 ~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~   82 (390)
T TIGR02718         4 ITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA   82 (390)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence            4455566777777788889999999874 99999999973  44456666666666 45789999888653332222111


Q ss_pred             -HHHHH-hhcchhhH-HHHHHHHHHHHHHhhhhhhhhhhhhhh-hccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        353 -LCCFI-IPFSTSYQ-MLMLPICGICFGMALVDTALLPTLGYL-VDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       353 -~~~~~-~~~~~~~~-~l~~~~~l~g~g~~~~~~~~~~~~~~~-~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                       +..+. .....+.. .......+..+..+.    ..+..... .+..++++++...+....+..+|..+|+...+++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~  158 (390)
T TIGR02718        83 CLASLALVGPDVAGAGWAVGLLACASLASAT----QDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG  158 (390)
T ss_pred             HHHHHHcCCcchhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             11111 11222211 222222222222222    22222222 334455666777777888888899999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCC
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDE  508 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (871)
                      +.||+..|++.+++.++..+..++.++..+               +++        +  .. .      +          
T Consensus       159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~---------------~~~--------~--~~-~------~----------  196 (390)
T TIGR02718       159 KFGQRPAFLLVACVPLASLVCVLWLKDRAV---------------ASP--------E--AP-L------A----------  196 (390)
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHcCCCCc---------------Ccc--------c--cc-h------h----------
Confidence            999999999998877665554433322100               000        0  00 0      0          


Q ss_pred             CcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc
Q psy17194        509 NKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS  588 (871)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (871)
                                                                                                     .
T Consensus       197 -------------------------------------------------------------------------------~  197 (390)
T TIGR02718       197 -------------------------------------------------------------------------------R  197 (390)
T ss_pred             -------------------------------------------------------------------------------h
Confidence                                                                                           0


Q ss_pred             ccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccch-hhhhhhhhhhhhhhccCchhh
Q psy17194        589 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       589 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~-~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      ..++++++|+|.++......++..........+.+.|++| .|+++.+.|+++...++ ..+++.++.|++.||++++|.
T Consensus       198 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~  276 (390)
T TIGR02718       198 RASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRT  276 (390)
T ss_pred             HHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            0023667888888777777777777777777888999976 69999999999888764 666788999999999998884


Q ss_pred             HHHHHHHHHHhhH-Hhhhcc-----hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHH
Q psy17194        668 LMVAVGLVLEGLC-CFIIPF-----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA  741 (871)
Q Consensus       668 ~~~~~g~~~~~~~-l~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g  741 (871)
                        ...+..+.++. +.++..     ..+....+...+..+++.+...+...+......+  +++.+|+.+++.+...++|
T Consensus       277 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~lg  352 (390)
T TIGR02718       277 --FILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAG--DGDQAGTDVTAVQSTRDLG  352 (390)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--cccchHHHHHHHHHHHHHH
Confidence              33444433222 222211     1112222222223333344443433333333322  1378899999999999999


Q ss_pred             HhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHH
Q psy17194        742 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP  774 (871)
Q Consensus       742 ~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~  774 (871)
                      +.+||.++|.++|..|++..|.+.+++.+++..
T Consensus       353 ~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~  385 (390)
T TIGR02718       353 ELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL  385 (390)
T ss_pred             HHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence            999999999999999999999888777666544

RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.

>TIGR00898 2A0119 cation transport protein

Probab=99.89  E-value=9.1e-22  Score=227.10  Aligned_cols=372  Identities=15%  Similarity=0.133  Sum_probs=239.6

Q ss_pred             HHHhhCCC---chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q psy17194        300 IEDNLTTD---NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICF  376 (871)
Q Consensus       300 l~~~~g~s---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~  376 (871)
                      +.++++++   ..+.++..+.+.++..++.++.|+++||+|||+.+  ..+.++..++.++.+++++++.+++.+++.|+
T Consensus       115 i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~  192 (505)
T TIGR00898       115 IVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVL--LLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGM  192 (505)
T ss_pred             EEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHH--HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence            55668888   88899999999999999999999999999999965  66777778888888888999999999999999


Q ss_pred             HHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhc
Q psy17194        377 GMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI  456 (871)
Q Consensus       377 g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  456 (871)
                      +.+...+.....   +.+..|+++|+.+.++......+|.+++|.+++.+.+   |++.|++.++..++..+..+++++.
T Consensus       193 ~~~~~~~~~~~~---~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~es  266 (505)
T TIGR00898       193 GIGGIWVQAVVL---NTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPES  266 (505)
T ss_pred             hccchHHHHHHH---hheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            998874444444   4555666999999999999999999999988776654   9999999887777666555554432


Q ss_pred             ccCCCC---chhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhcccccc
Q psy17194        457 YDFKPF---ENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTG  533 (871)
Q Consensus       457 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  533 (871)
                      .+....   .++..+..++.          .+    .+......+..  +                              
T Consensus       267 p~~l~~~~~~~~a~~~l~~~----------~~----~~~~~~~~~~~--~------------------------------  300 (505)
T TIGR00898       267 PRWLISQGRIEEALKILQRI----------AK----INGKKLPAEVL--S------------------------------  300 (505)
T ss_pred             hHHHHHCCCHHHHHHHHHHH----------HH----HcCCCCCHHHH--h------------------------------
Confidence            211000   00000000000          00    00000000000  0                              


Q ss_pred             CccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHH
Q psy17194        534 PPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANV  613 (871)
Q Consensus       534 ~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  613 (871)
                                                             ....++.    ...+++.++++++++|.++...+...+.++
T Consensus       301 ---------------------------------------~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  337 (505)
T TIGR00898       301 ---------------------------------------LSLEKDL----SSSKKQYSFLDLFRTPNLRKTTLCLMMLWF  337 (505)
T ss_pred             ---------------------------------------hhhhhhh----hhccCCCcHHHHhCChHHHHHHHHHHHHHH
Confidence                                                   0000000    000011245788999988776666555554


Q ss_pred             HHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhh--H
Q psy17194        614 ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY--Q  691 (871)
Q Consensus       614 ~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~--~  691 (871)
                      ........++.++ +.++.+..   ......++..+++.++.+++.||+|+|+  ...++.++.+++++.+.+..+.  +
T Consensus       338 ~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~--~~~~~~~~~~~~~l~~~~~~~~~~~  411 (505)
T TIGR00898       338 TTAFSYYGLVLDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRY--TMAASLLLAGVALLLLLFVPVDLYF  411 (505)
T ss_pred             HHHHHHHHHhccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHcCCCchH
Confidence            4444444444444 33455533   3334456777788899999999999877  5566666666666555443322  2


Q ss_pred             HHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHH
Q psy17194        692 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  771 (871)
Q Consensus       692 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~  771 (871)
                      ..+...++.+++.+...+   ....+..|.+|++.++++.|+.++...+|+.++|.+.+  .+..++...+.+.+++.++
T Consensus       412 ~~~~~~~~~~~~~~~~~~---~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~--~~~~~~~~~~~~~~~~~~~  486 (505)
T TIGR00898       412 LRTALAVLGKFGITSAFQ---MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY--LGEKWLFLPLVLFGGLALL  486 (505)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH--HHHHHHhhHHHHHHHHHHH
Confidence            223333333333333222   23445556677888999999999999999999999998  4556677788888777777


Q ss_pred             HHHHHHHH
Q psy17194        772 YAPVLIYL  779 (871)
Q Consensus       772 ~~~~~~~~  779 (871)
                      +....+++
T Consensus       487 ~~~~~~~l  494 (505)
T TIGR00898       487 AGILTLFL  494 (505)
T ss_pred             HHHHHHcC
Confidence            66555544

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.89  E-value=1.8e-20  Score=213.21  Aligned_cols=355  Identities=14%  Similarity=0.135  Sum_probs=243.1

Q ss_pred             HHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHh
Q psy17194         49 STALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGAL  128 (871)
Q Consensus        49 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l  128 (871)
                      .++.+..++..+...+.++.+..+.                          ++.++.++|.+..+..+..++..|+.|.+
T Consensus        12 g~g~~~~~~~~~~~~~~l~~yyt~v--------------------------~Gls~~~vg~i~~i~ri~dai~dp~~G~l   65 (473)
T PRK10429         12 GFGAFGKDFAIGIVYMYLMYYYTDV--------------------------VGLSVGLVGTLFLVARIWDAINDPIMGWI   65 (473)
T ss_pred             ccchhHHhHHHHHHHHHHHHHHHHh--------------------------cCCCHHHHHHHHHHHHHHHHHhhchheee
Confidence            3444555555666666666666552                          24499999999999999999999999999


Q ss_pred             hh----hhCC-chHHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        129 ID----RIGY-DLPMMIGLCIMFLSTALFACGR------SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       129 ~D----r~Gr-r~~l~~~~~~~~i~~~l~~~a~------s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      +|    |+|| |+.++++.+..+++..++...+      .+..+++..++.+++.....+...+++.|+-.++++|.+..
T Consensus        66 sD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~  145 (473)
T PRK10429         66 VNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLV  145 (473)
T ss_pred             hhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHH
Confidence            99    6698 5566678888888766664433      24456667778888888888888999999854678999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhh-------hCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC---CCCCcccchh
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQF-------AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK---PESHSTVPIW  267 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~-------~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~  267 (871)
                      ++.....++|..+.+.+...+.+.       .+|+....+.+++.++..+..++..+|.+.....+.   ++.+.....+
T Consensus       146 ~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  225 (473)
T PRK10429        146 PYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVA  225 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHH
Confidence            998888888766666555443332       246666677777666666566555555321111111   1111122334


Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      .+++||.++.++...++..........+.+.|.+...+ +....+++.+...++.+++.++.+++.||+|+|+.+  ..+
T Consensus       226 ~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~--~~~  302 (473)
T PRK10429        226 LIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW--AGA  302 (473)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH--HHH
Confidence            46688888888877777776666666665555544333 455666777766788899999999999999999865  333


Q ss_pred             HHHHHHHHHHhh-----cchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc--cc--ccchhhHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIP-----FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDV--RY--VSVYGSIYAIADISYSLAYAI  418 (871)
Q Consensus       348 ~~~~~~~~~~~~-----~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~--~~--~~~rg~a~gi~~~~~~lg~~i  418 (871)
                      ..+..++.+...     ...+.+.+++..++.+++.+.......++.++.+|.  .+  .+..|..+|..++...+|.++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al  382 (473)
T PRK10429        303 SIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAF  382 (473)
T ss_pred             HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHH
Confidence            333332222221     133455555666677888887776677777777763  12  233477999999999999999


Q ss_pred             HHHHHHHHHhhhCh
Q psy17194        419 GPIVAGGIVDAIGF  432 (871)
Q Consensus       419 gp~l~g~l~~~~g~  432 (871)
                      ++.+.|.+.+..||
T Consensus       383 ~~~i~g~~l~~~Gy  396 (473)
T PRK10429        383 AAFFIGVVLGLIGY  396 (473)
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999998876

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.88  E-value=1.4e-19  Score=200.34  Aligned_cols=379  Identities=12%  Similarity=0.107  Sum_probs=265.1

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ++.++...+-..+.+....+.++.+.+++|.                           +..+.+++..+..+..++.+|+
T Consensus         6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~---------------------------~~~~~~~i~~~~~l~~~i~~Pi   58 (477)
T TIGR01301         6 LLRVASVAAGVQFGWALQLSLLTPYVQELGI---------------------------PHAWASIIWLCGPLSGLLVQPL   58 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHhH
Confidence            3445555565677777888888889988876                           8899999999999999999999


Q ss_pred             hhHhhh----hhCCchHHHH-HHHHHHHHHHHHHhhhhHH-----------------HHHHHHHHHHhhhhhhhhhHHHH
Q psy17194        125 SGALID----RIGYDLPMMI-GLCIMFLSTALFACGRSYG-----------------VLFFARSLQGVGSAFADTSGLAM  182 (871)
Q Consensus       125 ~G~l~D----r~Grr~~l~~-~~~~~~i~~~l~~~a~s~~-----------------~l~~~r~l~G~~~g~~~~~~~a~  182 (871)
                      .|+++|    |+||||.+++ +.+..+++..+++++++++                 .++++-.+..++.....+...++
T Consensus        59 ~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rAL  138 (477)
T TIGR01301        59 VGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAF  138 (477)
T ss_pred             eeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999    5999998877 4666677777777776643                 22333344555788788888999


Q ss_pred             hhcccCChhhH-HHHHHHHHHHHHHHHHHhHHHHHHH--Hhhh-------------CChhHHHHHHHHHHHHHHHHHHhc
Q psy17194        183 IADRFTEENER-SQALGIALAFISFGCLVAPPFGGAL--YQFA-------------GKEIPFLILAFVSLLDGFMLLLVM  246 (871)
Q Consensus       183 i~~~~~~~~~r-~~~~g~~~~~~~~G~~lg~~l~~~l--~~~~-------------gwr~~f~~~~~~~l~~~i~~~~~~  246 (871)
                      ++|.+++++|| +.++++.+...++|.++|+.++++.  .+.+             +.|..|++.+++.+++.++..+..
T Consensus       139 iaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v  218 (477)
T TIGR01301       139 LADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAV  218 (477)
T ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence            99997543333 6899999999999999999999875  2222             468899999998888888888888


Q ss_pred             ccchhhhccC--------CCCCCcccchhhhh---cc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCch---
Q psy17194        247 KPVKEQLNQK--------KPESHSTVPIWKLF---MD--PYIAVCSGALLMANVALAFLEPTISLWIED-NLTTDNW---  309 (871)
Q Consensus       247 ~~~~~~~~~~--------~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~---  309 (871)
                      +|.+...+++        .++.......++++   |+  +.++.++...++..+++..+..+...|+.+ .|+.++.   
T Consensus       219 ~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~  298 (477)
T TIGR01301       219 KENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGA  298 (477)
T ss_pred             eccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchh
Confidence            7754311110        00001111222333   32  677888889999999988888888888764 4554321   


Q ss_pred             --h-----HHHHHHhhHHhHHHHHHHHHHHHhhcCc-hhHHHHHHHHHHHHHHHHHhhcchh------------------
Q psy17194        310 --K-----IGMIWLPAFFPHVFGVVITVKLAKLYPT-YQWLMVAVGLVLEGLCCFIIPFSTS------------------  363 (871)
Q Consensus       310 --~-----~g~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~~~~~~------------------  363 (871)
                        +     ..+....+.+...+.+++..++.+|+|+ |+.+  ..+.++.++++....+..+                  
T Consensus       299 ~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~--~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~  376 (477)
T TIGR01301       299 KYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLW--GIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPP  376 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH--HHHHHHHHHHHHHHHHHHhhhhccccccccccccCcc
Confidence              1     1233344455555667788899999985 5544  5565566666555543322                  


Q ss_pred             ---hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--hhhHHHH
Q psy17194        364 ---YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--FTALNFL  438 (871)
Q Consensus       364 ---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--~~~~f~~  438 (871)
                         .+..++...+.|+..+.....-.++++...+. ..+..|..+|+.|.+..+...+.....|.+.+.+|  -.+.+.+
T Consensus       377 ~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~-~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~  455 (477)
T TIGR01301       377 TGIKASALIVFAILGIPLAITYSIPFALASIRSSN-LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVV  455 (477)
T ss_pred             hhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc-cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHH
Confidence               24555666667777777765555555554442 12456999999999999999999999998777776  4566777


Q ss_pred             HHHHHHHHHHHHHHH
Q psy17194        439 IAFMNILYAPVLIYL  453 (871)
Q Consensus       439 ~~~~~~~~~~~~~~~  453 (871)
                      .++..+++.++.+++
T Consensus       456 ~gv~~~~aa~~~~~~  470 (477)
T TIGR01301       456 GAVAAFVSGLLALIL  470 (477)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            777777766655543

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>PRK09848 glucuronide transporter; Provisional

Probab=99.88  E-value=4.8e-20  Score=208.97  Aligned_cols=354  Identities=11%  Similarity=0.118  Sum_probs=232.3

Q ss_pred             HHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhH
Q psy17194         48 VSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA  127 (871)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~  127 (871)
                      ..++.+...+..+...+.++.+.++.                          ++.++.++|.+.+...+..++..|+.|+
T Consensus        13 yg~g~~~~~~~~~~~~~~l~~y~~~~--------------------------~gl~~~~~g~~~~~~~~~~~~~~~~~G~   66 (448)
T PRK09848         13 YSLGDVANNFAFAMGALFLLSYYTDV--------------------------AGVGAAAAGTMLLLVRVFDAFADVFAGR   66 (448)
T ss_pred             hccchHHhHHHHHHHHHHHHHHHHHH--------------------------cCCCHHHHHHHHHHHHHHHHHhhhhhee
Confidence            33454555556665556665566542                          2448999999999999999999999999


Q ss_pred             hhhhh----CCchHH-HHHHHHHHHHHHHHH-hh----h--hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        128 LIDRI----GYDLPM-MIGLCIMFLSTALFA-CG----R--SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       128 l~Dr~----Grr~~l-~~~~~~~~i~~~l~~-~a----~--s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      ++||.    ||||.+ ..+.+...+...+.. ..    +  ....+++..++.+++.+...+...++..+...++++|.+
T Consensus        67 l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~  146 (448)
T PRK09848         67 VVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRAR  146 (448)
T ss_pred             eeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHH
Confidence            99996    777654 555555554444432 11    1  233345566778888888888878887777666678998


Q ss_pred             HHHHHHHHHH-----HHHHHhHHHHHHHHhhh--CChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        196 ALGIALAFIS-----FGCLVAPPFGGALYQFA--GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  268 (871)
Q Consensus       196 ~~g~~~~~~~-----~G~~lg~~l~~~l~~~~--gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (871)
                      ..++...+.+     ++..++|.+++......  +|.....+.++++++..++.....+|.++   ++.++......+++
T Consensus       147 ~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~---~~~~~~~~~~~~~~  223 (448)
T PRK09848        147 LGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVV---RIVAQPSLKISLQT  223 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccC---CCccCCCHHHHHHH
Confidence            8777665433     44555665554321110  11111122233333333333333333221   11111122334567


Q ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        269 LFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      ++|||.++...+..++............+.|+++.+|.+....++......++.+++.++.+++.||+|+|+.+  ..+.
T Consensus       224 l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--~~g~  301 (448)
T PRK09848        224 LKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--LIGA  301 (448)
T ss_pred             HhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH--HHHH
Confidence            88999998888877777777777777777788887887766555555555667788999999999999999865  5555


Q ss_pred             HHHHHHHHHhhcc--hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc----cccchhhHHHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFS--TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISYSLAYAIGPIV  422 (871)
Q Consensus       349 ~~~~~~~~~~~~~--~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~----~~~~rg~a~gi~~~~~~lg~~igp~l  422 (871)
                      .+..++.+.+.+.  .+.+..++..++.++|.+...+...+...+..|..    ..+++|..+|+.++...+|.++++.+
T Consensus       302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i  381 (448)
T PRK09848        302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSI  381 (448)
T ss_pred             HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHH
Confidence            5555555554443  34555566667788888888777666766666531    22356999999999999999999999


Q ss_pred             HHHHHhhhCh
Q psy17194        423 AGGIVDAIGF  432 (871)
Q Consensus       423 ~g~l~~~~g~  432 (871)
                      .|.+.+..||
T Consensus       382 ~g~~l~~~G~  391 (448)
T PRK09848        382 PAFILGLSGY  391 (448)
T ss_pred             HHHHHHHcCC
Confidence            9999888776

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.88  E-value=2.7e-20  Score=209.52  Aligned_cols=330  Identities=18%  Similarity=0.244  Sum_probs=267.1

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhh----hhCCchH-HHHHHHHHHHHHHHHHhh-h-------hHHHHHHHHHH
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALID----RIGYDLP-MMIGLCIMFLSTALFACG-R-------SYGVLFFARSL  167 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grr~~-l~~~~~~~~i~~~l~~~a-~-------s~~~l~~~r~l  167 (871)
                      +.++..+|++..+..+..++..|+.|.++|    |+||||. ++++.++.+++..++... +       ....+++..++
T Consensus        33 gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l  112 (428)
T PF13347_consen   33 GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYIL  112 (428)
T ss_pred             CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHH
Confidence            448999999999999999999999999999    8997665 557888888888888766 4       23345777778


Q ss_pred             HHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh-------CChhHHHHHHHHHHHHHH
Q psy17194        168 QGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA-------GKEIPFLILAFVSLLDGF  240 (871)
Q Consensus       168 ~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~-------gwr~~f~~~~~~~l~~~i  240 (871)
                      ..++.........++..|+.+++++|.+..++......+|.++...+.+.+.+.+       +|++..++.+++.++..+
T Consensus       113 ~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~  192 (428)
T PF13347_consen  113 FDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFL  192 (428)
T ss_pred             HHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhh
Confidence            8999999999999999998766789999999999999999987777766665432       599999999999998888


Q ss_pred             HHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH
Q psy17194        241 MLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF  320 (871)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~  320 (871)
                      +..+..+|.+++.++++++.+.....+.+++||.++.+.+..++............+.|.++..|.+ ...+.+.....+
T Consensus       193 i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~  271 (428)
T PF13347_consen  193 ITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFV  271 (428)
T ss_pred             hhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHH
Confidence            8888887733333333333344556778889999999998888888888888888888888887766 566777778889


Q ss_pred             hHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc--
Q psy17194        321 PHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDVR--  396 (871)
Q Consensus       321 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~--  396 (871)
                      +.+++.++.++++||+|+|+.+  ..+..+..++.++..+.+  +.+..++..++.+++.+.......++.+++.|..  
T Consensus       272 ~~~v~~~~~~~l~~r~gk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~  349 (428)
T PF13347_consen  272 ASIVGSPLWGRLSKRFGKKKVY--IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEW  349 (428)
T ss_pred             HHHHHHHHHHHHHHHccceeeh--hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHH
Confidence            9999999999999999999955  666777777666666554  7888888888899999998877888888887742  


Q ss_pred             --cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        397 --YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       397 --~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                        .+++.|..+|+.++...++..+++.+.|.+.+..|+.
T Consensus       350 ~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy~  388 (428)
T PF13347_consen  350 KTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGYD  388 (428)
T ss_pred             hcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence              2344699999999999999999999999999887754

>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []

Probab=99.88  E-value=2.1e-20  Score=199.90  Aligned_cols=391  Identities=14%  Similarity=0.139  Sum_probs=262.1

Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q psy17194        270 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV  349 (871)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~  349 (871)
                      .||+.++......++..+.+....++++.|+++..|+|..++|.+.+...+..++.+++.|.++||.|.||.++..+..+
T Consensus         4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l   83 (412)
T PF01306_consen    4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL   83 (412)
T ss_dssp             CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence            46778888888888888899999999999999888999999999999999999999999999999999777554344333


Q ss_pred             HHHHHH-HHhhcchhh-HHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        350 LEGLCC-FIIPFSTSY-QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       350 ~~~~~~-~~~~~~~~~-~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      +...+. +...+.+-. ...+++.++.++..+.......+..-..+++ -.++.+.-+|-..+.+++|.+++..++|.+.
T Consensus        84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er-~sr~~~feYG~~R~wGSig~ai~s~~~G~L~  162 (412)
T PF01306_consen   84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAER-VSRRNGFEYGRARMWGSIGFAIASLLAGILF  162 (412)
T ss_dssp             HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHH-HHHHHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH-HHHHhcCCcchHHHHhhHHHHHHHHHhheee
Confidence            322222 222221111 0112222222333344333334444333333 1233355666677788999999999999998


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      + .+.+..||+.....++..++.+..+..+.++..               .     .+..+.+                 
T Consensus       163 ~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~---------------~-----~~~~~~~-----------------  204 (412)
T PF01306_consen  163 N-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAE---------------V-----ADALGAK-----------------  204 (412)
T ss_dssp             H-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS----------------S-----STTSSS------------------
T ss_pred             e-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhh---------------h-----hcccccC-----------------
Confidence            7 466777887665554444333332221000000               0     0000000                 


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                  +++.
T Consensus       205 ----------------------------------------------------------------------------~~~~  208 (412)
T PF01306_consen  205 ----------------------------------------------------------------------------KDKV  208 (412)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ----------------------------------------------------------------------------CCCC
Confidence                                                                                        0000


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc---CCCccchhhhhhccchhhhhhhhhhhhhhhccCc
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL---TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT  664 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~---g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~  664 (871)
                      +.+...+++|+|++|...+........++.+...+|.|++..+   +.+....|++.+.-.+..++.-.+..++.+|+|.
T Consensus       209 ~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~  288 (412)
T PF01306_consen  209 SLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA  288 (412)
T ss_dssp             -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred             cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            0112478999999999988888888888888888899987543   3455678888888888888998999999999999


Q ss_pred             hhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHH-HHHHHHHHh
Q psy17194        665 YQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA-DISYSLAYA  743 (871)
Q Consensus       665 ~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~-~~~~~~g~~  743 (871)
                      |+  .+.++..+..+=...+++.++.+.+.+.-.+.++-......   +..-|..+..|++..+++..+. ++..++|..
T Consensus       289 k~--~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lv---a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~  363 (412)
T PF01306_consen  289 KN--LLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLV---AAFKYITAHFDKRLSATLYLVGFQFAKQIGII  363 (412)
T ss_dssp             HH--HHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHH
T ss_pred             Hh--HHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHH
Confidence            88  45556666666666677888888887788888887766444   4555665656588888999884 789999999


Q ss_pred             HhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        744 IGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       744 ~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      +.+.++|.++|+.|++.+|++++.+.++..++..+.-
T Consensus       364 i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l  400 (412)
T PF01306_consen  364 ILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL  400 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence            9999999999999999999999988877765555543

The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.

>KOG0252|consensus

Probab=99.88  E-value=2.9e-22  Score=208.14  Aligned_cols=393  Identities=15%  Similarity=0.078  Sum_probs=264.7

Q ss_pred             cccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHH
Q psy17194         39 SQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQ  118 (871)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~  118 (871)
                      +++...+.+..++.|.|.++...++.+.|.+...+.  +.++                 ++=+.++...+.+..+..+|.
T Consensus        37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~--~~~~-----------------~~g~~ps~i~~~Vn~~A~vGt   97 (538)
T KOG0252|consen   37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYY--HGDE-----------------SGGHYPSGVLALVNAAALVGT   97 (538)
T ss_pred             HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhc--CCCC-----------------CCCcCCchHHHHHHHHHHHHH
Confidence            334456667788889999999999999888877652  1111                 011346778899999999999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChh
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR-------SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEEN  191 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~-------s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~  191 (871)
                      ++++++.|+++||+|||+++...+++..++++++++..       -++++...|++.|+|.|.-+|.+.++.+|. +.++
T Consensus        98 i~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~-an~~  176 (538)
T KOG0252|consen   98 IFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSES-ANKK  176 (538)
T ss_pred             HHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhh-hhhc
Confidence            99999999999999999999999999999999887752       267889999999999999999999999996 6889


Q ss_pred             hHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh---------------CChhHHHHHHHHHHHHHHHHHHhcccchhhh---
Q psy17194        192 ERSQALGIALAFISFGCLVAPPFGGALYQFA---------------GKEIPFLILAFVSLLDGFMLLLVMKPVKEQL---  253 (871)
Q Consensus       192 ~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~---------------gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~---  253 (871)
                      +||..++.+.+..+.|.+.|.+++-.+...+               =||..|.+.++++++.. ...+..||++.-.   
T Consensus       177 ~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l-y~Rl~M~Et~~Y~al~  255 (538)
T KOG0252|consen  177 TRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL-YFRLKMPETARYTALV  255 (538)
T ss_pred             cccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HhhhcCCcchhHHHHh
Confidence            9999999999988998888888776654322               19999888777765532 2333345443211   


Q ss_pred             --c-------cCCCC-------------CCcccc----hhhhhcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        254 --N-------QKKPE-------------SHSTVP----IWKLFMD---PYIAVCSGALLMANVALAFLEPTISLWIEDNL  304 (871)
Q Consensus       254 --~-------~~~~~-------------~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  304 (871)
                        +       .++..             .+.+.+    +.+.+..   +.+...+...++.-.+++....+....++. .
T Consensus       256 ~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-i  334 (538)
T KOG0252|consen  256 SKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-I  334 (538)
T ss_pred             hcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-h
Confidence              0       00000             000011    1122222   223333444444444555444444444432 4


Q ss_pred             CCCchhHHH--------HHHhh-HHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhh-H---HHHHHH
Q psy17194        305 TTDNWKIGM--------IWLPA-FFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY-Q---MLMLPI  371 (871)
Q Consensus       305 g~s~~~~g~--------~~~~~-~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~l~~~~  371 (871)
                      |+.+.+...        ...+. ..+.+.|..+...++|+.||++..  +.++.++++..+.++...+. .   ..++..
T Consensus       335 g~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq--~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y  412 (538)
T KOG0252|consen  335 GVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQ--LMGFFIMTIFFFVIAGPYNQLENTIGFVVLY  412 (538)
T ss_pred             ccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHH--HhhHHHHHHHHHHHcCCcccccccCceeehH
Confidence            554433222        11111 222333555667889999999855  77888888887777766551 1   111111


Q ss_pred             HH-HHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hhChhhHHHHHHHHHHH
Q psy17194        372 CG-ICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD-----AIGFTALNFLIAFMNIL  445 (871)
Q Consensus       372 ~l-~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~-----~~g~~~~f~~~~~~~~~  445 (871)
                      .+ +.++....   .......-.+.+|...|++..|+....+-+|++++....+++.+     ..|.++++++.+.+.++
T Consensus       413 ~l~~ff~NFGP---n~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~  489 (538)
T KOG0252|consen  413 SLTFFFGNFGP---NATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLL  489 (538)
T ss_pred             HHHHHHHhcCC---CceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHH
Confidence            11 12222211   12222223455788999999999999999999999999999999     78999999999999998


Q ss_pred             HHHHHHHHhhccc
Q psy17194        446 YAPVLIYLKNIYD  458 (871)
Q Consensus       446 ~~~~~~~~~~~~~  458 (871)
                      ..+..+++++++.
T Consensus       490 gi~~T~l~pEtk~  502 (538)
T KOG0252|consen  490 GILFTLLIPETKG  502 (538)
T ss_pred             hHheeEEeecccc
Confidence            8887777775433

>KOG0254|consensus

Probab=99.87  E-value=4.7e-20  Score=211.84  Aligned_cols=348  Identities=14%  Similarity=0.138  Sum_probs=231.8

Q ss_pred             hHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhh
Q psy17194        105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIA  184 (871)
Q Consensus       105 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~  184 (871)
                      .+.+|+.++..++..++++++|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|......+.+++
T Consensus        89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s  168 (513)
T KOG0254|consen   89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS  168 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence            56799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-hCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC-----
Q psy17194        185 DRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF-AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP-----  258 (871)
Q Consensus       185 ~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~-~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~-----  258 (871)
                      |. +|++.||...+..+....+|..++..++....+. ++||..+.+..+.+++..+. .++.||.|+..-+..+     
T Consensus       169 Ei-ap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~  246 (513)
T KOG0254|consen  169 EI-APAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK  246 (513)
T ss_pred             hc-CChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH
Confidence            97 5888999999999999999999996665554432 48999999999988887777 7777776642211000     


Q ss_pred             ----------CCC-------------------ccc-chhhhhc----chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        259 ----------ESH-------------------STV-PIWKLFM----DPYIAVCSGALLMANVALAFLEPTISLWIEDNL  304 (871)
Q Consensus       259 ----------~~~-------------------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  304 (871)
                                +.+                   ... .+.++++    ++......+..+....+......+.+.+++. .
T Consensus       247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~  325 (513)
T KOG0254|consen  247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-A  325 (513)
T ss_pred             HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-c
Confidence                      000                   000 0112222    1112222222222222333444555555444 4


Q ss_pred             CCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchh------------hHHHHHHHH
Q psy17194        305 TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS------------YQMLMLPIC  372 (871)
Q Consensus       305 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~~~  372 (871)
                      |.+... ........+...++..++..+.||+|||+.+  ..+.....++.++++....            .+..++..+
T Consensus       326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll--l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (513)
T KOG0254|consen  326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL--LFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLC  402 (513)
T ss_pred             CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH--HHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHH
Confidence            555332 3444455677778888889999999999965  5666666666555542211            111122222


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH--HH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP--VL  450 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~--~~  450 (871)
                      ++-..++.......  .....+.+|.+.|+++.++......+...+-......+.+..+....|...+.++.+...  +.
T Consensus       403 ~~v~~f~~g~g~v~--w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~  480 (513)
T KOG0254|consen  403 LFIFSFAIGWGPVP--WVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVF  480 (513)
T ss_pred             HHHHHHhcccccch--hhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHhe
Confidence            22222222111111  123445567799999999999888888877777766666665544555555544444433  34


Q ss_pred             HHHhhcccCC
Q psy17194        451 IYLKNIYDFK  460 (871)
Q Consensus       451 ~~~~~~~~~~  460 (871)
                      .+.++++.+.
T Consensus       481 ~~~pETkg~s  490 (513)
T KOG0254|consen  481 FFVPETKGLT  490 (513)
T ss_pred             EEcccCCCCc
Confidence            4455554443

>PRK09584 tppB putative tripeptide transporter permease; Reviewed

Probab=99.87  E-value=4.1e-19  Score=202.41  Aligned_cols=431  Identities=12%  Similarity=0.068  Sum_probs=246.3

Q ss_pred             hhhhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh-cCchhHHH
Q psy17194        266 IWKLFMDP-YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-YPTYQWLM  343 (871)
Q Consensus       266 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~  343 (871)
                      ..+.+++| .++..+...++..+.++.+..+++.|+++++|++..+.+++.+.+........+++|+++|| +|||+.+ 
T Consensus        13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~-   91 (500)
T PRK09584         13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI-   91 (500)
T ss_pred             ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH-
Confidence            34556776 47777778888888888899999999999999999998888877666666666789999999 5999955 


Q ss_pred             HHHHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy17194        344 VAVGLVLEGLCCFIIPFST-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  422 (871)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l  422 (871)
                       ..+..+.+++.+++.++. +.+.+++.+.+.++|.+...+...+...+..+. ++++++.+.++++...++|..++|.+
T Consensus        92 -~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~-~~~~~~~~~~~~~~~~~iG~~~gp~i  169 (500)
T PRK09584         92 -MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK-DDPRLDGAFTMYYMSINIGSFFSMLA  169 (500)
T ss_pred             -HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC-CchhhhhcchHHHHHHHHHHHHHHHH
Confidence             677777777777776653 344556667788888887655444554444432 12345668889999999999999999


Q ss_pred             HHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccc
Q psy17194        423 AGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQ  502 (871)
Q Consensus       423 ~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  502 (871)
                      +|++.+..||++.|++.++..+++++..++.++..++...+++         .+     ..              +.   
T Consensus       170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~---------~~-----~~--------------~~---  218 (500)
T PRK09584        170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPD---------FE-----PI--------------NY---  218 (500)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCC---------cc-----cc--------------ch---
Confidence            9999999999999998876655555444333321111000000         00     00              00   


Q ss_pred             ccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccC
Q psy17194        503 ETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK  582 (871)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  582 (871)
                                          ........++..+.   +.... ...+.+..-.......+. .... +. +...+     
T Consensus       219 --------------------~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~-----  266 (500)
T PRK09584        219 --------------------RKLLLTIVGVVALI---AIATW-LLHNQEIARMALGVVALG-IVVI-FG-KEAFA-----  266 (500)
T ss_pred             --------------------hhHHHHHHHHHHHH---HHHHH-HHhcchHHHHHHHHHHHH-HHHH-HH-HHHhh-----
Confidence                                00000000000000   00000 000000000000000000 0000 00 00000     


Q ss_pred             CCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHH--hcCCCcc------chhhhhhccchhhhhhhhh
Q psy17194        583 KPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIED--NLTTDNW------KIGMIWLPAFFPHVFGVVI  654 (871)
Q Consensus       583 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~--~~g~s~~------~~gl~~~~~~~~~~i~~~~  654 (871)
                               ..+.-++|.+..  +..++....++......|.++..  ..+.+..      ..+.+.+...+..++..++
T Consensus       267 ---------~~~~~~~~~~~~--~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~  335 (500)
T PRK09584        267 ---------MKGAARRKMIVA--FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPI  335 (500)
T ss_pred             ---------cCHHHHHHHHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHH
Confidence                     011112222222  22223334444445555555432  2222222      2444455566666666666


Q ss_pred             h----hhhhhccCchhhHHHHHHHHHHhhHHhhhcchhh---------hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhh
Q psy17194        655 T----VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS---------YQMLMLPICGICFGMALVDTALLPTLGYLVDV  721 (871)
Q Consensus       655 ~----g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  721 (871)
                      .    +++.||.+..+  ...+|+++.+++++.+....+         .++.++..+..++|..+..+..........+ 
T Consensus       336 ~~~~~~~l~~r~~~~~--~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP-  412 (500)
T PRK09584        336 LAAIYNKMGDRLPMPH--KFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVP-  412 (500)
T ss_pred             HHHHHHHhCcCCCcHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCc-
Confidence            5    55555555444  677888998888877654322         3456778888899999887766666555554 


Q ss_pred             ccccccchHHhHHHHHHHHHHhHhhhhHHHhH----------hhhChHHHHHHHHHHHHHHHHHHHH
Q psy17194        722 RYVSVYGSIYAIADISYSLAYAIGPIVAGGIV----------DAIGFTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       722 ~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~----------~~~g~~~~~~~~a~~~~~~~~~~~~  778 (871)
                        ++.+|.++|+..+...+|..++..+.+...          ...++.+.|...++++++.+.+.+.
T Consensus       413 --~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~  477 (500)
T PRK09584        413 --QRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL  477 (500)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence              889999999776666666555554443211          0124778888888777665544443

>TIGR00788 fbt folate/biopterin transporter

Probab=99.87  E-value=2.2e-20  Score=210.97  Aligned_cols=364  Identities=15%  Similarity=0.076  Sum_probs=246.5

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHH-HhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLR-FIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      ...+.++...++..++. +.....++.+.+ ++|+                           ++++++...+...+...+
T Consensus        25 ~~~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~---------------------------s~~~i~~~~sl~~lpw~~   76 (468)
T TIGR00788        25 RVVLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGL---------------------------DGARYQRLVGLSSLGWAL   76 (468)
T ss_pred             chHHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHH
Confidence            34455566667777777 555444444444 5666                           899999999999999998


Q ss_pred             hhhhhhHhhhhhC-----CchHHHHHHHHHH-HHHHHHHhhhhHHHHH-HHHHHHHhhhhhhhhhHHHHhhcccCChhhH
Q psy17194        121 VNPFSGALIDRIG-----YDLPMMIGLCIMF-LSTALFACGRSYGVLF-FARSLQGVGSAFADTSGLAMIADRFTEENER  193 (871)
Q Consensus       121 ~~~~~G~l~Dr~G-----rr~~l~~~~~~~~-i~~~l~~~a~s~~~l~-~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r  193 (871)
                      -. ++|+++||++     ||+.++++.++.+ ++....+..++...+. +..++.+++.+...++..+++.|.. + +++
T Consensus        77 K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~-~-~~~  153 (468)
T TIGR00788        77 KP-FAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERI-R-ESP  153 (468)
T ss_pred             HH-HHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhh-h-cCC
Confidence            54 4999999998     7777788777763 4444444445544444 4889999999999999999999986 4 344


Q ss_pred             HH---HHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC-----------
Q psy17194        194 SQ---ALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE-----------  259 (871)
Q Consensus       194 ~~---~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-----------  259 (871)
                      ..   ..++.....++|.++|+.++|.+.+.++||..|++.+++.++.. +..++.+|+++....+..+           
T Consensus       154 ~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~-~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~  232 (468)
T TIGR00788       154 SAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL-FVSNLSKERRAFVRPRIGTYLEMNMALLTL  232 (468)
T ss_pred             CcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH-HHHHhcccccccccccccccchhhhhhhhh
Confidence            33   33444455568999999999999999999999999988887763 3445555543111111000           


Q ss_pred             ------CCcccchhhhhcchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHH
Q psy17194        260 ------SHSTVPIWKLFMDPYIAVCSGALLM-ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL  332 (871)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l  332 (871)
                            ++.....++.+++|.++...+..++ ...........+ .+..+.+|+++...|.......++.+++....+++
T Consensus       233 ~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~  311 (468)
T TIGR00788       233 GVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRF  311 (468)
T ss_pred             hHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence                  0011234556777777665554444 221111111110 12334689999999999999999999999999999


Q ss_pred             HhhcCchhHHHHHHHHHHHHHHHHHhhcc----------hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchh
Q psy17194        333 AKLYPTYQWLMVAVGLVLEGLCCFIIPFS----------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYG  402 (871)
Q Consensus       333 ~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg  402 (871)
                      .+|++.|+.+  ..+.++.+++.+.....          ++.+.++...++.+++.+...   .+....+.+..|++.+|
T Consensus       312 ~~~~~~r~~l--~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~---~~~~~~~~~~~p~~~eg  386 (468)
T TIGR00788       312 LKTFPYRLLF--GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKF---MPFLVLLARLCPSGCES  386 (468)
T ss_pred             HhhCCHHHHH--HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHH---ccHHHHHHHhCCCCcee
Confidence            9999988855  56666555554332211          222333444556677766663   34444455555669999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----hhhHHHHHHHHH
Q psy17194        403 SIYAIADISYSLAYAIGPIVAGGIVDAIG-----FTALNFLIAFMN  443 (871)
Q Consensus       403 ~a~gi~~~~~~lg~~igp~l~g~l~~~~g-----~~~~f~~~~~~~  443 (871)
                      +.+++.++..++|..+++.++|.+.++.|     ++..+....+..
T Consensus       387 t~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~  432 (468)
T TIGR00788       387 SVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHS  432 (468)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHH
Confidence            99999999999999999999999999988     666655544433

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]

Probab=99.86  E-value=6.1e-19  Score=179.25  Aligned_cols=348  Identities=14%  Similarity=0.102  Sum_probs=259.0

Q ss_pred             HHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q psy17194        289 LAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLM  368 (871)
Q Consensus       289 ~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  368 (871)
                      ...+.+.++. +++++|.|...+|++.+.-.++..+..++..++.+|+|.+|.+  ..++++.+++..+=... +.+.++
T Consensus        28 itsvgPLL~~-Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l--~~~Llli~~G~~iR~~~-~~~~L~  103 (395)
T COG2807          28 ITSVGPLLDE-IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSL--FLALLLIAAGILIRSLG-GLPLLF  103 (395)
T ss_pred             hhhhhhhHHH-HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHH--HHHHHHHHHHHHHHhcc-cHHHHH
Confidence            3444455554 6778999999999999999999999999999999999999955  78888888888776655 667777


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-ChhhHHHHHHHHHHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-GFTALNFLIAFMNILYA  447 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-g~~~~f~~~~~~~~~~~  447 (871)
                      ....+.|.|.+..    ...+..++.+..|++.+..+|++.+..++++++++.+.-.+.++. ||+....+.+...++.+
T Consensus       104 ~gt~l~G~gIav~----nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl  179 (395)
T COG2807         104 LGTLLAGAGIAVI----NVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLAL  179 (395)
T ss_pred             HHHHHHHhhHHHH----HHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHH
Confidence            8888888888876    444444555567788899999999999999999999999999988 79999999888888877


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      ++++.-. .|++..                      ...                                         
T Consensus       180 ~~WlPq~-~r~~~~----------------------~~~-----------------------------------------  195 (395)
T COG2807         180 LIWLPQA-LREQAA----------------------SIA-----------------------------------------  195 (395)
T ss_pred             HHHhhhc-cccccc----------------------ccc-----------------------------------------
Confidence            6665321 110000                      000                                         


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  607 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  607 (871)
                                                                                 ....+-.+++|+|.-|...+.
T Consensus       196 -----------------------------------------------------------~~~~~~~~vw~~~~aW~vtLf  216 (395)
T COG2807         196 -----------------------------------------------------------TKLVSVRKVWRSPLAWQVTLF  216 (395)
T ss_pred             -----------------------------------------------------------cccccccccccCchhHHHHHH
Confidence                                                                       000011458999999999999


Q ss_pred             HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcc-
Q psy17194        608 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPF-  686 (871)
Q Consensus       608 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~-  686 (871)
                      ..+....+|..+.|+|.++.| .|+|+.++|.+.+...+..+..++....+.+|...+|.+++ .......++++.+.+ 
T Consensus       217 mGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~-~~~~~~l~G~~G~~~~  294 (395)
T COG2807         217 MGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVV-LALLLMLVGLVGLLLA  294 (395)
T ss_pred             HHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHH-HHHHHHHHHHHHHHHh
Confidence            999999999999999999966 59999999999999999999999999999998766665333 333333334333322 


Q ss_pred             -hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHH
Q psy17194        687 -STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFL  764 (871)
Q Consensus       687 -~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~  764 (871)
                       ...++.+   .+.+|+|.|..++........-  ..+++..++-+|+.+.+.++=.++||.+.|++.|.+| |+.....
T Consensus       295 P~~~~~lw---~~llG~G~G~~F~laL~li~~r--s~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~  369 (395)
T COG2807         295 PGQLPILW---ALLLGLGQGGAFPLALTLILLR--SSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVL  369 (395)
T ss_pred             hhhHHHHH---HHHHhCccchHHHHHHHHHHhh--cCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHH
Confidence             2223333   4677777777766544433322  2236788999999999999999999999999999876 6666555


Q ss_pred             HHHHHHHHHH
Q psy17194        765 IAFMNILYAP  774 (871)
Q Consensus       765 ~a~~~~~~~~  774 (871)
                      .+.+.++...
T Consensus       370 l~~~~i~m~i  379 (395)
T COG2807         370 LALATLLMLI  379 (395)
T ss_pred             HHHHHHHHHH
Confidence            5544444433

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.86  E-value=2.6e-18  Score=190.98  Aligned_cols=374  Identities=14%  Similarity=0.160  Sum_probs=235.6

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .+.+..++...+...+.+......+|.++.+ +                           +.++.+.+.+.+.+.....+
T Consensus         8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l---------------------------gls~~~a~~i~~~~~~~~~l   60 (493)
T PRK15462          8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQL---------------------------KYDDNHAYELFSAYCSLVYV   60 (493)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------CCCHHHHHHHHHHHHHHHHH
Confidence            3445566666677777777777888888765 4                           44889999999999999999


Q ss_pred             hhhhhhHhhhhh-CCchHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh-hhHHHHH
Q psy17194        121 VNPFSGALIDRI-GYDLPMMIGLCIMFLSTALFACGR-SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE-NERSQAL  197 (871)
Q Consensus       121 ~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~-s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~-~~r~~~~  197 (871)
                      +.+++|+++||+ ||||+++++.++.+++.++++... +...++++..+.++|.|...+...++++|.++++ ++|.+++
T Consensus        61 ~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf  140 (493)
T PRK15462         61 TPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGF  140 (493)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcccccee
Confidence            999999999999 999999999999999987776543 2233444444555667777777789999998543 2799999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhh---ccCCCCCCccc----------
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL---NQKKPESHSTV----------  264 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~---~~~~~~~~~~~----------  264 (871)
                      ++.+...++|..++|.+.+++.+.+||++.|.+.++..++..+ .++..++..++.   ++++.+++...          
T Consensus       141 ~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (493)
T PRK15462        141 SLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLV-IFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVL  219 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHH-HHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999987665444333 333322111110   00000000000          


Q ss_pred             --------------ch--------------------hhhhc---chhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        265 --------------PI--------------------WKLFM---DPYIA---VCSGALLMANVALAFLEPTISLWIEDNL  304 (871)
Q Consensus       265 --------------~~--------------------~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~  304 (871)
                                    ..                    .+..+   ++++.   .+++...+....+....+.+..|..+.-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~v  299 (493)
T PRK15462        220 LVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFV  299 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhc
Confidence                          00                    00000   11221   1222222222333333444555555432


Q ss_pred             CCC----chhHHHHHHhhHHhHHHHHHHHHHHHhhcCc--hh---HHHHHHHHHHHHHHHHHhhcc---------hhhHH
Q psy17194        305 TTD----NWKIGMIWLPAFFPHVFGVVITVKLAKLYPT--YQ---WLMVAVGLVLEGLCCFIIPFS---------TSYQM  366 (871)
Q Consensus       305 g~s----~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~--~~---~~~~~~~~~~~~~~~~~~~~~---------~~~~~  366 (871)
                      +.+    +...++..+...+..++..++.+++=.|..+  |.   ..=...++++.+++.+.+.+.         .+.++
T Consensus       300 d~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~w  379 (493)
T PRK15462        300 NRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPL  379 (493)
T ss_pred             cchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHH
Confidence            211    1235666777777777777766666444421  11   111356666666666554321         25566


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHH-HHHHHHHHHHHHHHHh------------hhChh
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISY-SLAYAIGPIVAGGIVD------------AIGFT  433 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~-~lg~~igp~l~g~l~~------------~~g~~  433 (871)
                      ++...+++.+|.-...|...+..+++.+.   +.+|+.+|++.... .+|..++..+.+...+            ...+.
T Consensus       380 l~~~~~~~t~gEl~~sPvgls~~~~laP~---~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  456 (493)
T PRK15462        380 MVLGLAVMGFAELFIDPVAMSQITRIEIP---GVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYI  456 (493)
T ss_pred             HHHHHHHHHHHHHHHChHHHHHHHHhChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHH
Confidence            77888889999999988777777766554   89999999986533 4555555555554421            11355


Q ss_pred             hHHHHHHHHHHHH
Q psy17194        434 ALNFLIAFMNILY  446 (871)
Q Consensus       434 ~~f~~~~~~~~~~  446 (871)
                      ..|...+...++.
T Consensus       457 ~~f~~~~~~~~~~  469 (493)
T PRK15462        457 EVFDQITWGALAC  469 (493)
T ss_pred             HHHHHHHHHHHHH
Confidence            6677766655444

>KOG0255|consensus

Probab=99.85  E-value=1.6e-18  Score=200.47  Aligned_cols=346  Identities=15%  Similarity=0.108  Sum_probs=233.6

Q ss_pred             ccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhH
Q psy17194        100 AEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSG  179 (871)
Q Consensus       100 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~  179 (871)
                      ...+.....+..+++.+|.+++++++|+++||+|||++++.++++..++.++.++++|++.+++.|+++|++.+......
T Consensus       113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~  192 (521)
T KOG0255|consen  113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG  192 (521)
T ss_pred             eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC---
Q psy17194        180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK---  256 (871)
Q Consensus       180 ~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~---  256 (871)
                      ..++.|++ ++++|+.+..+ ......+..+++++++++..  +||+.+++..++.++..++ +++.+|.++-...+   
T Consensus       193 ~~~~~E~~-~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~  267 (521)
T KOG0255|consen  193 FGLVAEIV-SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRI  267 (521)
T ss_pred             Hhhheeec-CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCch
Confidence            99999998 55899999999 77888888888888888887  8999999999998876665 55555554210000   


Q ss_pred             ----------------CCCC------------------CcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        257 ----------------KPES------------------HSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIED  302 (871)
Q Consensus       257 ----------------~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  302 (871)
                                      ....                  +......++++.+++........+..+.......-++. ...
T Consensus       268 ~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~-~~~  346 (521)
T KOG0255|consen  268 DEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL-NVS  346 (521)
T ss_pred             HHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh-hhh
Confidence                            0000                  01122345566665444444444433333333222222 222


Q ss_pred             hhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHH---HHHHHHHHHHHHh
Q psy17194        303 NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQM---LMLPICGICFGMA  379 (871)
Q Consensus       303 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~l~g~g~~  379 (871)
                      .+|.+..   ............+....+...|+.|||...  ..+..+..++++..++......   ..+...+..++.+
T Consensus       347 ~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  421 (521)
T KOG0255|consen  347 GLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPPL--FLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG  421 (521)
T ss_pred             hcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHHH--HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence            2343332   233333445666666778999999988854  6777777777777766543322   2222222222322


Q ss_pred             hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHH-HHHHhhccc
Q psy17194        380 LVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPV-LIYLKNIYD  458 (871)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~  458 (871)
                      ..   .........+..|...|+.+.+..+....+|.+++|.+.-.... ......+.+.+....+...+ ..++++++.
T Consensus       422 ~~---~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~  497 (521)
T KOG0255|consen  422 SA---FNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKG  497 (521)
T ss_pred             HH---HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence            22   23334445556677899999999999999999999988765544 22222222234333333333 355555444


Q ss_pred             CC
Q psy17194        459 FK  460 (871)
Q Consensus       459 ~~  460 (871)
                      ..
T Consensus       498 ~~  499 (521)
T KOG0255|consen  498 KP  499 (521)
T ss_pred             CC
Confidence            33

>KOG2533|consensus

Probab=99.85  E-value=3.9e-20  Score=204.85  Aligned_cols=365  Identities=13%  Similarity=0.051  Sum_probs=232.4

Q ss_pred             HHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHh
Q psy17194        300 IEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMA  379 (871)
Q Consensus       300 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~  379 (871)
                      ++++.+....+.+.+.+++.++++++.++++.+.||++-.+.+  ....++.++..++.....|.+.+++.+++.|+..+
T Consensus        72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l--~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es  149 (495)
T KOG2533|consen   72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGL--SVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFES  149 (495)
T ss_pred             CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHH--HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence            3466777788899999999999999999999999999966633  44444555555445557899999999999999999


Q ss_pred             hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh------hhChhhHHHHHHHHHHHHHHHHHH-
Q psy17194        380 LVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD------AIGFTALNFLIAFMNILYAPVLIY-  452 (871)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~------~~g~~~~f~~~~~~~~~~~~~~~~-  452 (871)
                      ...|.....++..   +.+++||+-+|++++..++|+++|+.+...+.+      ..||||.|++.+++.+...++.++ 
T Consensus       150 ~~wP~~~~~lg~w---y~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~  226 (495)
T KOG2533|consen  150 GGWPGVVAILGNW---YGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFF  226 (495)
T ss_pred             ccchHHHHHHHhh---cChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEE
Confidence            9865555554443   455999999999999999999999999988743      468999999999888777655444 


Q ss_pred             HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccc
Q psy17194        453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPST  532 (871)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (871)
                      ++....+....+++++...                           .++.+++                           
T Consensus       227 lp~~P~~~~fl~~~ek~~~---------------------------~~~~~~~---------------------------  252 (495)
T KOG2533|consen  227 LPDNPSKAWFLTDEEKELV---------------------------VERLRES---------------------------  252 (495)
T ss_pred             ecCChhhccccchHHHHHH---------------------------HHHHHhc---------------------------
Confidence            3321111100000000000                           0000000                           


Q ss_pred             cCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHH
Q psy17194        533 GPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  612 (871)
Q Consensus       533 g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  612 (871)
                                                                    .+....++.++..+++.+++|.++...+..++..
T Consensus       253 ----------------------------------------------~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~  286 (495)
T KOG2533|consen  253 ----------------------------------------------PSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLK  286 (495)
T ss_pred             ----------------------------------------------cCCCcccccCHHHHHHHHhchhHHHHHHHHHHHh
Confidence                                                          0000000012234688999999999999999999


Q ss_pred             HHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhcc---CchhhHHHHHHHHHHhhHHhhhcchhh
Q psy17194        613 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY---PTYQWLMVAVGLVLEGLCCFIIPFSTS  689 (871)
Q Consensus       613 ~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~---~~~~~~~~~~g~~~~~~~l~~~~~~~~  689 (871)
                      ...+++.+++|+|+++..|+|..++.++..+..++.+++.+++|.++||.   ..+|........+...++...+.+...
T Consensus       287 lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~  366 (495)
T KOG2533|consen  287 LVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAV  366 (495)
T ss_pred             hccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999887789999999999999999999999999999995   334443433444444455444444332


Q ss_pred             hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHh-hhhHHHhHhhhChHHHHHHHHHH
Q psy17194        690 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG-PIVAGGIVDAIGFTALNFLIAFM  768 (871)
Q Consensus       690 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~g-p~~~g~l~~~~g~~~~~~~~a~~  768 (871)
                      ........+....+.....+....-.+...+.  ..++-+..+++....+.++.+. +...+.....+++.+.|.+..+.
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g--~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~~  444 (495)
T KOG2533|consen  367 LPGAYGAFLIGPYGLIATAIIALSWTSANLAG--NTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVAA  444 (495)
T ss_pred             chHHhHHHHhcchhhHHHHHHHHhhccccccc--hHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHHH
Confidence            22222222222222222222222222222221  1223333344444444444333 34444444557888888544444


Q ss_pred             HHH
Q psy17194        769 NIL  771 (871)
Q Consensus       769 ~~~  771 (871)
                      ++.
T Consensus       445 ~~~  447 (495)
T KOG2533|consen  445 CVG  447 (495)
T ss_pred             HHH
Confidence            333

>TIGR01272 gluP glucose/galactose transporter

Probab=99.85  E-value=9.7e-19  Score=186.43  Aligned_cols=278  Identities=15%  Similarity=0.118  Sum_probs=202.8

Q ss_pred             hhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh------------
Q psy17194        154 CGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF------------  221 (871)
Q Consensus       154 ~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~------------  221 (871)
                      ..++++.++++-++.|.|.+...+..++++++.- ++|++++.+++.+..+++|..+||.+++.+...            
T Consensus         6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~-~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~   84 (310)
T TIGR01272         6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILG-PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA   84 (310)
T ss_pred             HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHC-CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence            4578999999999999999999999999999985 667899999999999999999999999987731            


Q ss_pred             ----hCChhHHHHHHHHHHHHHHHHHHh-cccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        222 ----AGKEIPFLILAFVSLLDGFMLLLV-MKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTI  296 (871)
Q Consensus       222 ----~gwr~~f~~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (871)
                          .+|+++|++.+++.++..++..+. .|+.+++.+++.. +++....++.+++|.++...+..++.......+..+.
T Consensus        85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~  163 (310)
T TIGR01272        85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVS-SGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFL  163 (310)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccc-cccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                479999997777765555444333 2222221111101 1111123456778888887777777777888999999


Q ss_pred             HHHHHHh--hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q psy17194        297 SLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGI  374 (871)
Q Consensus       297 ~~~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  374 (871)
                      +.|+.+.  +|.++.+.+...+.+..+.++|+++++++.||+++||.+  ..+..+..++.++....++... ....++.
T Consensus       164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~  240 (310)
T TIGR01272       164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--AFNAFLAVLLSIGAALTHGYVA-MWFVLAL  240 (310)
T ss_pred             HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH--HHHHHHHHHHHHHHHHcCCHHH-HHHHHHH
Confidence            9999864  689999999999999999999999999999999988855  4444444444444433333322 2344567


Q ss_pred             HHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHH
Q psy17194        375 CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  441 (871)
Q Consensus       375 g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~  441 (871)
                      |++.+..+|...+...   +.. +++.+++.++. ....+|++++|++.|.+.|..|.+..|++..+
T Consensus       241 g~~~s~i~P~~~s~a~---~~~-~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~  302 (310)
T TIGR01272       241 GLFNSIMFPTIFSLAL---NAL-GRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP  302 (310)
T ss_pred             HHHHHHHHHHHHHHHH---hhh-hhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence            7777777555444433   322 23456666765 56779999999999999999999888875443

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.85  E-value=6e-18  Score=188.76  Aligned_cols=346  Identities=16%  Similarity=0.097  Sum_probs=261.1

Q ss_pred             hhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHH-HHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHhhhhhhhhhHH
Q psy17194        104 DSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMM-IGLCIMFLSTALFACG--RSYGVLFFARSLQGVGSAFADTSGL  180 (871)
Q Consensus       104 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~-~~~~~~~i~~~l~~~a--~s~~~l~~~r~l~G~~~g~~~~~~~  180 (871)
                      .+..++..++..+..++..|+.|.++|+-|+||.++ +...+..++++++.+.  .+++...+..++.-++.+.......
T Consensus        69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn  148 (477)
T PF11700_consen   69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN  148 (477)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            456788999999999999999999999999766544 4555555666666664  3455555666777778888888999


Q ss_pred             HHhhcccCChhhH--------------------------HHHHHHHHHHHHHHHHHhHHHHHHHHhh--------hCChh
Q psy17194        181 AMIADRFTEENER--------------------------SQALGIALAFISFGCLVAPPFGGALYQF--------AGKEI  226 (871)
Q Consensus       181 a~i~~~~~~~~~r--------------------------~~~~g~~~~~~~~G~~lg~~l~~~l~~~--------~gwr~  226 (871)
                      +++.|+.+ ++++                          ++..+.-.....+|.++.-++.-.+...        .+-|.
T Consensus       149 a~LP~la~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~  227 (477)
T PF11700_consen  149 AYLPDLAR-PEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRV  227 (477)
T ss_pred             HHhHhhcC-CChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhH
Confidence            99999864 4566                          8888888888888888877776554322        23588


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhhccCCCCC-------CcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        227 PFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPES-------HSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLW  299 (871)
Q Consensus       227 ~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (871)
                      .+.+.++..++..+..++..|+.+.....++...       +.....+++.|.|.....++..++..-+...+......|
T Consensus       228 ~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~  307 (477)
T PF11700_consen  228 AFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIY  307 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            8999888888888888888887654221111111       111234555667888888888888888888999999999


Q ss_pred             HHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCch--hHHHHHHHHHHHHHHHHHhhc--------chhhHHHHH
Q psy17194        300 IEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY--QWLMVAVGLVLEGLCCFIIPF--------STSYQMLML  369 (871)
Q Consensus       300 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~  369 (871)
                      .++++|++..+...+.....+..++|.++++++.||+|.|  +.+  ..++.+..+..+.-.+        ..+.+.+++
T Consensus       308 a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l--~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~  385 (477)
T PF11700_consen  308 ATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL--LISLILWIIIPLYGLFGFWPSFFGLKSPWEFWV  385 (477)
T ss_pred             HHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH--HHHHHHHHHHHHHHHHHhhhcccCcccHHHHHH
Confidence            9999999999999888888999999999999999999998  654  3333333222211111        346667777


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHH
Q psy17194        370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAP  448 (871)
Q Consensus       370 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~  448 (871)
                      ..++.|+..|...+..-++.+.+.|   +++.+..+|++.......+.+||.+.|.+.+..| .|..+....++.+++++
T Consensus       386 ~a~~~G~~~G~~qs~sRs~~~~LiP---~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~  462 (477)
T PF11700_consen  386 LAVLIGLFMGGIQSASRSLFSRLIP---PGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI  462 (477)
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHhCC---CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence            7788888888886666666666555   4888999999999999999999999999999998 88888888888877777


Q ss_pred             HHHHHhh
Q psy17194        449 VLIYLKN  455 (871)
Q Consensus       449 ~~~~~~~  455 (871)
                      +++....
T Consensus       463 ll~~v~~  469 (477)
T PF11700_consen  463 LLFFVDV  469 (477)
T ss_pred             HHhhccc
Confidence            7665544

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>PTZ00207 hypothetical protein; Provisional

Probab=99.85  E-value=1.7e-18  Score=195.42  Aligned_cols=374  Identities=11%  Similarity=0.061  Sum_probs=251.7

Q ss_pred             ccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHH
Q psy17194         40 QRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQL  119 (871)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~  119 (871)
                      +||..+..........+.. .......|.+.+++|.                           +..+++++.++. ....
T Consensus        25 ~Rw~~lva~~~~~~~~g~~-y~fsv~s~~L~~~lgl---------------------------s~~~l~~i~svg-~~~g   75 (591)
T PTZ00207         25 RRFALLVLGAFCSICTSFM-YAFNLISGAMQARYNL---------------------------TQRDLSTITTVG-IAVG   75 (591)
T ss_pred             chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc---------------------------CHHHHHHHHHHH-HHHH
Confidence            4454444333333333332 2334556777888765                           888999998874 3445


Q ss_pred             HhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh------hhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhH
Q psy17194        120 MVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG------RSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENER  193 (871)
Q Consensus       120 ~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r  193 (871)
                      .+.++.|++.||+|||+++.++.++++++.++++++      ++++.+++.|++.|+|.+...+.....+.++| | ++|
T Consensus        76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p-~~R  153 (591)
T PTZ00207         76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-P-SNR  153 (591)
T ss_pred             HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-h-hhh
Confidence            678889999999999999999999999999999997      68999999999999999999999999999997 5 689


Q ss_pred             HHHHHHHHHHHHHHHHH-hHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhc---c-------C------
Q psy17194        194 SQALGIALAFISFGCLV-APPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN---Q-------K------  256 (871)
Q Consensus       194 ~~~~g~~~~~~~~G~~l-g~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~---~-------~------  256 (871)
                      |+++|+...+.++|.++ +++..+++.  .+|+..|++.+++.++..++.+++.++++....   +       +      
T Consensus       154 G~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~  231 (591)
T PTZ00207        154 GAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMR  231 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhh
Confidence            99999999999999986 455555443  368888988888888887777776654431100   0       0      


Q ss_pred             -----------------------------------------------------------C--------------C-C---
Q psy17194        257 -----------------------------------------------------------K--------------P-E---  259 (871)
Q Consensus       257 -----------------------------------------------------------~--------------~-~---  259 (871)
                                                                                 .              + +   
T Consensus       232 ~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~  311 (591)
T PTZ00207        232 KGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDG  311 (591)
T ss_pred             hhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccc
Confidence                                                                       0              0 0   


Q ss_pred             ------------------------C-C---cccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CC-Cch
Q psy17194        260 ------------------------S-H---STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-TT-DNW  309 (871)
Q Consensus       260 ------------------------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~-s~~  309 (871)
                                              + .   ...+.++.+++..+|+++..+++.......+...+....+. + |. ...
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~s-l~g~~~~~  390 (591)
T PTZ00207        312 KAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTA-LAGEAPDD  390 (591)
T ss_pred             cccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHH-hcCCCCCc
Confidence                                    0 0   00023344556677777777776665555554445544333 4 54 222


Q ss_pred             hHHH-HHHhhHHhHHHHHHHHHHHH----hhcCchh---HHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhh
Q psy17194        310 KIGM-IWLPAFFPHVFGVVITVKLA----KLYPTYQ---WLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALV  381 (871)
Q Consensus       310 ~~g~-~~~~~~~~~~~~~~~~g~l~----dr~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~  381 (871)
                      +... ..+...++..+|++..|.+.    +|..++|   .+.+.+..+ ..++.+++.+......++++.++.|++.|..
T Consensus       391 ~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~  469 (591)
T PTZ00207        391 ALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFM  469 (591)
T ss_pred             cceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHh
Confidence            2122 66777888888998888777    2221111   122233333 4444444444333257888889999999998


Q ss_pred             hhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHH-HHHHHHHHhhh----------C---hhhHHHHHHHHHHHHH
Q psy17194        382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG-PIVAGGIVDAI----------G---FTALNFLIAFMNILYA  447 (871)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~ig-p~l~g~l~~~~----------g---~~~~f~~~~~~~~~~~  447 (871)
                      .+...+..+++..    ++-|+-+-+......+|+.+- -.+.|.++|.-          |   ++..|++++++++.+.
T Consensus       470 ~~~~~~i~selFg----k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~  545 (591)
T PTZ00207        470 AATIALVTRTIFA----KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAF  545 (591)
T ss_pred             HHHHHHHHHHHhc----cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHH
Confidence            7666666655544    566777777777777777766 56778888752          2   6788888888887776


Q ss_pred             HHHHH
Q psy17194        448 PVLIY  452 (871)
Q Consensus       448 ~~~~~  452 (871)
                      ++...
T Consensus       546 ~~s~~  550 (591)
T PTZ00207        546 ITSTY  550 (591)
T ss_pred             HHHhh
Confidence            66443

>TIGR00901 2A0125 AmpG-related permease

Probab=99.85  E-value=5.8e-19  Score=194.03  Aligned_cols=319  Identities=14%  Similarity=0.079  Sum_probs=210.3

Q ss_pred             HHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-----CchhHHHHHHHHHHHHHHHHHhhcc---h
Q psy17194        291 FLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-----PTYQWLMVAVGLVLEGLCCFIIPFS---T  362 (871)
Q Consensus       291 ~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~~~~~~~~~~~~~~~~~~~~---~  362 (871)
                      ......|.+.+ ++|+|..+.++.... .+...+ .++.|+++||+     ||||.++ ..+..+.++....+.+.   .
T Consensus         6 ~~~~~~~~~~~-~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l-~~~~~~~~~~~~~l~~~~~~~   81 (356)
T TIGR00901         6 LVGNTLPYWLR-SKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWL-VLTQVLLLSLLLILSFLVPST   81 (356)
T ss_pred             hHHhHHHHHHH-HcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHH-HHHHHHHHHHHHHHHcCCcch
Confidence            34455666655 479999999998655 444444 88999999998     7877542 34444455554444444   3


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--------hhh
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--------FTA  434 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--------~~~  434 (871)
                      +.+.+....++.+++.+...+...+.   +.+..|+++|+++.++...+..+|..+++.+++.+.+..|        |+.
T Consensus        82 ~l~~l~~~~~~~~~~~~~~~~~~~a~---~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~  158 (356)
T TIGR00901        82 DLPLLAGLAFLIAFFSATQDIALDAW---RLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGY  158 (356)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHH
Confidence            34444444444555555443333333   3444566999999999999999999999999999999888        999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccc
Q psy17194        435 LNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAA  514 (871)
Q Consensus       435 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  514 (871)
                      .|++.+++.++..+..++..++..++   +         +.         + ++.      ..+.               
T Consensus       159 ~f~i~ai~~l~~~~~~~~~~~e~~~~---~---------~~---------~-~~~------~~~~---------------  195 (356)
T TIGR00901       159 IFFWTALLILPGLLVTLFLAKEPQED---A---------SV---------P-KPL------TQAV---------------  195 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCCcc---c---------cc---------c-hhH------HHHH---------------
Confidence            99988876666544433322210000   0         00         0 000      0000               


Q ss_pred             ccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh
Q psy17194        515 NVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK  594 (871)
Q Consensus       515 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  594 (871)
                                                                                                +.+++.
T Consensus       196 --------------------------------------------------------------------------~~~~~~  201 (356)
T TIGR00901       196 --------------------------------------------------------------------------LKPIRE  201 (356)
T ss_pred             --------------------------------------------------------------------------HHHHHH
Confidence                                                                                      002344


Q ss_pred             hccchh---HHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccc-hhhhhhhhhhhhhhhccCchhhHHH
Q psy17194        595 LFMDPY---IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF-FPHVFGVVITVKLAKLYPTYQWLMV  670 (871)
Q Consensus       595 l~~~~~---~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~-~~~~i~~~~~g~l~d~~~~~~~~~~  670 (871)
                      ++++|.   ++...+..++....++....++|.|+++ +|+++.+.|.++...+ ++.+++.+++|++.||+++|+  .+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~--~l  278 (356)
T TIGR00901       202 FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY--AL  278 (356)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH--HH
Confidence            556654   6666666667777888888999999987 8999999999988766 577889999999999999877  44


Q ss_pred             HHHHHHHhhHHhhhcch-----------hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHH
Q psy17194        671 AVGLVLEGLCCFIIPFS-----------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS  739 (871)
Q Consensus       671 ~~g~~~~~~~l~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~  739 (871)
                      ..+.++.+++...+.+.           ++.+.+....+..+++.+...+...+..++..|   ++++|+..|+++...+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p---~~~~g~~~g~~~~~~~  355 (356)
T TIGR00901       279 LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSN---PKFGATQMALLSSLSA  355 (356)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcC---CCccHHHHHHHHHHHh
Confidence            44555554444433221           233445555666677777777766666666666   9999999999988765

>TIGR00806 rfc RFC reduced folate carrier

Probab=99.85  E-value=7.3e-18  Score=180.70  Aligned_cols=387  Identities=10%  Similarity=0.020  Sum_probs=247.1

Q ss_pred             HHHHHHHHHHHhhCCCchh-HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH
Q psy17194        292 LEPTISLWIEDNLTTDNWK-IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLP  370 (871)
Q Consensus       292 ~~~~~~~~l~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  370 (871)
                      ..++...++.+++|++..+ .|.+.+.+..++.+..+++|+++||+|.|+++  ..+.+..++..++.+++++...+.+.
T Consensus        44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL--~l~~l~Wsl~t~L~~fa~Sl~~L~i~  121 (511)
T TIGR00806        44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL--VLQALSFVCVWLLLLLGTSVWHMQLM  121 (511)
T ss_pred             hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3455566788899999999 99999999999999999999999999999955  78888888999999999999999999


Q ss_pred             HHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHH---HHHHHHHH
Q psy17194        371 ICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLI---AFMNILYA  447 (871)
Q Consensus       371 ~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~---~~~~~~~~  447 (871)
                      +++.|++.+...    +...++...+|+++|+++.|+.+.+..+|.+++++++++ ...+||++.+.+.   .....+++
T Consensus       122 R~llGvaEA~~~----A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~  196 (511)
T TIGR00806       122 EVFYSVTMAARI----AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSV  196 (511)
T ss_pred             HHHHHHHHHHHH----HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHH
Confidence            999999999873    555556666778999999999999999999999999999 5578988765543   23334444


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhh
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKA  527 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  527 (871)
                      ++.+++++.++.--.+++... .+.   ...+   .++..+.                   +..+..........+.   
T Consensus       197 ~~a~~LP~~~~sl~f~~~~~~-~~~---~~~~---~~~~~~~-------------------~~~~~~~~~~~~~~~~---  247 (511)
T TIGR00806       197 FLALFLKRPKRSLFFNRLEDV-RGA---LPCE---LDQMVPG-------------------PGGKLEDYLGTCRDSF---  247 (511)
T ss_pred             HHHHhCCCCchhhhhcccccc-ccc---cccc---cccCCCC-------------------CccccchhhhhhhhHH---
Confidence            555555532221111110000 000   0000   0000000                   0000000000000000   


Q ss_pred             ccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHH
Q psy17194        528 SAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGA  607 (871)
Q Consensus       528 ~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  607 (871)
                                                             +..                  -...++.-.+||.++.-++-
T Consensus       248 ---------------------------------------~~~------------------l~~~~~~~y~n~~vl~WSlW  270 (511)
T TIGR00806       248 ---------------------------------------LVR------------------MLSELVTIYRNPQLLLWSLW  270 (511)
T ss_pred             ---------------------------------------HHH------------------HHHHHHHHhcCcchhhhhHH
Confidence                                                   000                  01124567788888777777


Q ss_pred             HHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcch
Q psy17194        608 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS  687 (871)
Q Consensus       608 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~  687 (871)
                      ..+...+++....+.-...++..+-...-.|.+-+...+...++++..|++-.++.+.-.+.+.+..++.+..++++.++
T Consensus       271 wa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t  350 (511)
T TIGR00806       271 WVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQS  350 (511)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcc
Confidence            77777777776666655554443322225666666667777778888888866654333346666667777778888999


Q ss_pred             hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhH----HHhHh---h-hChH
Q psy17194        688 TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA----GGIVD---A-IGFT  759 (871)
Q Consensus       688 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~----g~l~~---~-~g~~  759 (871)
                      +++|.--+..++++....+..+..+..++...+   .+..|...|+|+++..+-..+-..+.    |.-.+   . .=|.
T Consensus       351 ~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~---~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~  427 (511)
T TIGR00806       351 HDIWVLYVTYVLFRGIYQFLVPIATFQIASSLS---KELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYS  427 (511)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehh
Confidence            999886666666665555554444444444444   67889999999987777666555443    21111   1 1244


Q ss_pred             HHHHHHHHHHHHHHH
Q psy17194        760 ALNFLIAFMNILYAP  774 (871)
Q Consensus       760 ~~~~~~a~~~~~~~~  774 (871)
                      .-|.+++++.++...
T Consensus       428 ~yf~~~~~i~~~~~~  442 (511)
T TIGR00806       428 VYFLVLSIICFFGAG  442 (511)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            556666655555543

Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.

>PRK11462 putative transporter; Provisional

Probab=99.84  E-value=1.4e-17  Score=188.10  Aligned_cols=326  Identities=12%  Similarity=0.066  Sum_probs=222.8

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhh----hCCchH-HHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHH
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDR----IGYDLP-MMIGLCIMFLSTALFACGRS------YGVLFFARSLQG  169 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~~-l~~~~~~~~i~~~l~~~a~s------~~~l~~~r~l~G  169 (871)
                      ++++..+|.+..+.-+.-++..|+.|.++||    +||||. ++++.+..+++..++...++      +..+++..++..
T Consensus        41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~  120 (460)
T PRK11462         41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT  120 (460)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence            4599999999999999999999999999996    788665 55677788888777655442      445666777888


Q ss_pred             hhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh-------CChhHHHHHHHHHHHHHHHH
Q psy17194        170 VGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA-------GKEIPFLILAFVSLLDGFML  242 (871)
Q Consensus       170 ~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~-------gwr~~f~~~~~~~l~~~i~~  242 (871)
                      ++.........++.+|.-++++||.+..++...+..+|..+++.+...+.+..       +|+....+.+++.+++.++.
T Consensus       121 ~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~  200 (460)
T PRK11462        121 LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFC  200 (460)
T ss_pred             HHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHH
Confidence            99998988889999998766899999999999999999988888766655543       47777777777766665555


Q ss_pred             HHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhH
Q psy17194        243 LLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPH  322 (871)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~  322 (871)
                      +...+|.++.   ++++.+.....+..++|+.++.++...++..............|.+..++ ++...+.+...+.++.
T Consensus       201 ~~~~kE~~~~---~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g-~~~~~~~~l~~~~i~~  276 (460)
T PRK11462        201 FFTTKERVEA---PPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILG-TPEVFVAFLTTYCVGN  276 (460)
T ss_pred             HhcceeccCC---CccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcC-ChHHHHHHHHHHHHHH
Confidence            5544443211   11111223345667888888777666655555555554555555554444 3344556667778888


Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHHHHH-HHHHhhcc-hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc--cc-
Q psy17194        323 VFGVVITVKLAKLYPTYQWLMVAVGLVLEGL-CCFIIPFS-TSYQMLMLPICGICFGMALVDTALLPTLGYLVDV--RY-  397 (871)
Q Consensus       323 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~--~~-  397 (871)
                      +++.+++++++||+++|+.+.  .+..+..+ +....... .+...+++..++.+++.+...+....+..+..|.  .. 
T Consensus       277 iig~~l~~~l~~r~gkk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~t  354 (460)
T PRK11462        277 LIGSALAKPLTDWKCKVTIFW--WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCN  354 (460)
T ss_pred             HHHHHHHHHHHHHhChHHHHH--HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhc
Confidence            899999999999999887542  22222222 22221111 2222334444555666666555555666666663  11 


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhCh
Q psy17194        398 -VSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGF  432 (871)
Q Consensus       398 -~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~  432 (871)
                       .+..|..++..+....+|.++++.+.|.+.+..||
T Consensus       355 G~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy  390 (460)
T PRK11462        355 GKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY  390 (460)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence             22336667888899999999999999999987776

>PRK09848 glucuronide transporter; Provisional

Probab=99.84  E-value=1.4e-18  Score=197.01  Aligned_cols=352  Identities=12%  Similarity=0.084  Sum_probs=219.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc----CchhHHHHHHHHHHHHHHHHHhh
Q psy17194        284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY----PTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      ..........++++.|+++..|+++.++|.+.+...+...+..++.|+++||.    ||||.++...+......+.+++.
T Consensus        19 ~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~   98 (448)
T PRK09848         19 ANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW   98 (448)
T ss_pred             HhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh
Confidence            34455556667778899999999999999999999999999999999999996    66765433333322222222221


Q ss_pred             c----chh--hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHH-----HHHHHHHHHHHHHHh
Q psy17194        360 F----STS--YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYS-----LAYAIGPIVAGGIVD  428 (871)
Q Consensus       360 ~----~~~--~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~-----lg~~igp~l~g~l~~  428 (871)
                      .    ..+  ....+....+.+++.+...+...+....+...  +++|.+..+.-.....     ++..++|.+.+..-+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~--~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~  176 (448)
T PRK09848         99 VPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQ--PQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPE  176 (448)
T ss_pred             CcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            1    111  12233334555666766655455544444332  4677777666554433     344444544432111


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCC
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDE  508 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (871)
                      .....+..+. .++.++..++.+......+++.            +++          .++                   
T Consensus       177 ~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~------------~~~----------~~~-------------------  214 (448)
T PRK09848        177 EMVSVYHFWT-IVLAIAGMVLYFICFKSTRENV------------VRI----------VAQ-------------------  214 (448)
T ss_pred             chhhhHHHHH-HHHHHHHHHHHHHHHcCcEecc------------CCC----------ccC-------------------
Confidence            0010111111 1122222222222111000000            000          000                   


Q ss_pred             CcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc
Q psy17194        509 NKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS  588 (871)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (871)
                                                                                                 +  ..
T Consensus       215 ---------------------------------------------------------------------------~--~~  217 (448)
T PRK09848        215 ---------------------------------------------------------------------------P--SL  217 (448)
T ss_pred             ---------------------------------------------------------------------------C--CH
Confidence                                                                                       0  00


Q ss_pred             ccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhH
Q psy17194        589 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWL  668 (871)
Q Consensus       589 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~  668 (871)
                      ...++.++|||++....+..++.+.+++......|.|+++.+|.++...++.+.+..++.+++.++.+++.||+++|+  
T Consensus       218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~--  295 (448)
T PRK09848        218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN--  295 (448)
T ss_pred             HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH--
Confidence            012467899999999888888888888888888888888889988877777666667778889999999999999888  


Q ss_pred             HHHHHHHHHhhHHhhhcch--hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHHHHHHH
Q psy17194        669 MVAVGLVLEGLCCFIIPFS--TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISYSLAY  742 (871)
Q Consensus       669 ~~~~g~~~~~~~l~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~~~~g~  742 (871)
                      ...+|..+.+++++++.+.  .+.+.+.+.++..++|.+...+...++..+..|..    +.++.|..+|++++.+.+|.
T Consensus       296 ~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~  375 (448)
T PRK09848        296 TFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQ  375 (448)
T ss_pred             HHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHH
Confidence            5556666666555544332  34455555667778888887777777777776632    23457999999999999999


Q ss_pred             hHhhhhHHHhHhhhCh
Q psy17194        743 AIGPIVAGGIVDAIGF  758 (871)
Q Consensus       743 ~~gp~~~g~l~~~~g~  758 (871)
                      ++|+.+.|.+.+..||
T Consensus       376 aig~~i~g~~l~~~G~  391 (448)
T PRK09848        376 AIGGSIPAFILGLSGY  391 (448)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999887765

>KOG4686|consensus

Probab=99.84  E-value=3.1e-20  Score=179.74  Aligned_cols=344  Identities=19%  Similarity=0.232  Sum_probs=239.8

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhh-hCCchHHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHHhhhhhhh
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDR-IGYDLPMMIGLCIMFLSTALFA---CGRSYGVLFFARSLQGVGSAFAD  176 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~---~a~s~~~l~~~r~l~G~~~g~~~  176 (871)
                      +.+.++..++.+.|+....+...++|++.|| +|-|..-++-+....++.++++   ..+.+|+++++|++.|+|.-...
T Consensus        75 ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlA  154 (459)
T KOG4686|consen   75 NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLA  154 (459)
T ss_pred             ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhh
Confidence            4477899999999999999999999999997 6766655554555556666654   45899999999999999998888


Q ss_pred             hhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCC------hhH---HHHHHH----HHHHHHHHHH
Q psy17194        177 TSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGK------EIP---FLILAF----VSLLDGFMLL  243 (871)
Q Consensus       177 ~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gw------r~~---f~~~~~----~~l~~~i~~~  243 (871)
                      .+-..++.-||. .++.+.++|+.....-+|..+--.+.+++++..+-      +..   .+..+.    ..++++. ..
T Consensus       155 VaQN~yav~wFK-GKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical-~l  232 (459)
T KOG4686|consen  155 VAQNKYAVYWFK-GKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICAL-SL  232 (459)
T ss_pred             hhhcceeEEEec-CccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH-Hh
Confidence            888999999985 57999999999999999998888888888775431      111   111111    1111111 11


Q ss_pred             Hhcccchhhhc-cCCCCC--CcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH
Q psy17194        244 LVMKPVKEQLN-QKKPES--HSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF  320 (871)
Q Consensus       244 ~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~  320 (871)
                      -+..+..|+.- .++...  ..+.....-+ .|.+|.+.++.++......-+...-|.++++.+|+|+..++.+.+....
T Consensus       233 g~~D~rAerilh~e~g~~Ge~pkLtdv~~f-~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~  311 (459)
T KOG4686|consen  233 GLSDDRAERILHLEEGFLGEEPKLTDVNTF-YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYG  311 (459)
T ss_pred             hhhhhHHHHHHhhhcCcccCCccccccccc-CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhh
Confidence            11111111111 111111  1111111111 3778888888888888888888888999999999999999999888888


Q ss_pred             hHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccc
Q psy17194        321 PHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV  400 (871)
Q Consensus       321 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~  400 (871)
                      ...+..++.|.++||+|++-+++ ..+.+....+-....+  +.+.-++...+.|+...+......|.++.++++   ++
T Consensus       312 Isav~spvfg~i~Dk~G~n~~wv-~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE---~q  385 (459)
T KOG4686|consen  312 ISAVLSPVFGAISDKYGFNLWWV-ASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPE---EQ  385 (459)
T ss_pred             hhhhhhhhHHHhHhhhcceehhH-HHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH---HH
Confidence            88889999999999999876542 2333333333333332  233345566778888888766677887777666   89


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhh---HHHHHHHHHHHHHHHHHHH
Q psy17194        401 YGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTA---LNFLIAFMNILYAPVLIYL  453 (871)
Q Consensus       401 rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~---~f~~~~~~~~~~~~~~~~~  453 (871)
                      .|++.|..+...++|-++.|++.|.+.|.-| +.+   .|...+.+.+....+++.+
T Consensus       386 LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~  442 (459)
T KOG4686|consen  386 LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL  442 (459)
T ss_pred             hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence            9999999999999999999999999999876 333   3334444444444444443

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.84  E-value=5.7e-18  Score=182.78  Aligned_cols=332  Identities=16%  Similarity=0.202  Sum_probs=261.8

Q ss_pred             ccCchhHHHHHHHHHHHHHHHhhhhhhHhhhh----hCCch-HHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHH
Q psy17194        100 AEGEDSATGVLFASKAIVQLMVNPFSGALIDR----IGYDL-PMMIGLCIMFLSTALFACGRS------YGVLFFARSLQ  168 (871)
Q Consensus       100 ~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grr~-~l~~~~~~~~i~~~l~~~a~s------~~~l~~~r~l~  168 (871)
                      .++++..+|.++.+.-+.-++..|+.|.++||    +||+| -++.+.+..++.+.++..+++      ....++...+.
T Consensus        43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~  122 (467)
T COG2211          43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL  122 (467)
T ss_pred             cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence            35699999999999999999999999999996    78755 566788999998888887763      55667788999


Q ss_pred             HhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-------hCChhHHHHHHHHHHHHHHH
Q psy17194        169 GVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF-------AGKEIPFLILAFVSLLDGFM  241 (871)
Q Consensus       169 G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~-------~gwr~~f~~~~~~~l~~~i~  241 (871)
                      +++.........++.+++-.+++||.+..++.+...++|.++...+...+...       .||+..-.+.++++.+..+.
T Consensus       123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~  202 (467)
T COG2211         123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF  202 (467)
T ss_pred             HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence            99999999888999999877778999999999999999987777666665543       36888888888888887777


Q ss_pred             HHHhcccchhhhccCC--CCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhH
Q psy17194        242 LLLVMKPVKEQLNQKK--PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAF  319 (871)
Q Consensus       242 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~  319 (871)
                      +++-.+|...+..+.+  .+.+........++|+.+...++..++.........+....|.+...|.+.....+......
T Consensus       203 ~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~  282 (467)
T COG2211         203 CFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASG  282 (467)
T ss_pred             HHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHH
Confidence            7777666543222111  11111222345788999999888888888888888888888888888888888888888888


Q ss_pred             HhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc--
Q psy17194        320 FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDV--  395 (871)
Q Consensus       320 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~--  395 (871)
                      .+.+++.++..++.+|+|+|+.+  ..+.++..++.++..+.+  +.+..++..++.++|.+...+...+++++.+|.  
T Consensus       283 ~~~l~~~~~~p~L~~~~gkk~~~--~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge  360 (467)
T COG2211         283 AGLLIGLILWPRLVKKFGKKKLF--LIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGE  360 (467)
T ss_pred             HHHHHHHHhHHHHHHHhchHHHH--HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHH
Confidence            88888899999999999999966  566666666666555443  566777777888999999888888888888764  


Q ss_pred             c--cccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        396 R--YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       396 ~--~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      .  ..+..|...|...++.-+|.+++..+.|++.+..||.
T Consensus       361 ~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gyv  400 (467)
T COG2211         361 WKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGYV  400 (467)
T ss_pred             HHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            2  2233488999999999999999999999999988753

>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]

Probab=99.83  E-value=1.1e-17  Score=173.02  Aligned_cols=352  Identities=14%  Similarity=0.125  Sum_probs=251.9

Q ss_pred             HHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh---cchhhHH
Q psy17194        290 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP---FSTSYQM  366 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  366 (871)
                      ...+..+-+.+++.++.+..+++++...+..++.++.+..+++.+|+|.|+-+  ..++.++++++.++.   ...++..
T Consensus        29 ~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi--~lgL~l~avg~~lF~pAa~~~~y~~  106 (422)
T COG0738          29 TCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGI--VLGLLLYAVGAALFWPAASSKSYGF  106 (422)
T ss_pred             hhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHH--HHHHHHHHHHHHHHhhhhhhhhHHH
Confidence            33444444558899999999999999999999999999999999999999955  788888888888774   3456677


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA-----------------  429 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~-----------------  429 (871)
                      .+++.++.+.|.+.......|.+..+.++   +....-+.+.+..+.+|.+++|++++.+..+                 
T Consensus       107 FL~~lFila~Gi~~LetaaNp~v~~lg~~---~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~  183 (422)
T COG0738         107 FLVALFILASGIGLLETAANPYVTLLGKP---ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGA  183 (422)
T ss_pred             HHHHHHHHHhhhHHHHhccchHHHHhCCc---hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHH
Confidence            78888889999999877777777666555   5667778888999999999999999998873                 


Q ss_pred             --hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        430 --IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       430 --~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                        ..+++.|...+...++..+.....+.                 ++.++.+                            
T Consensus       184 ~~~~v~~pYl~~~~~lvll~v~~~~~k~-----------------p~~~~~~----------------------------  218 (422)
T COG0738         184 DASSVQFPYLILAGLLVLLAVLILLSKL-----------------PDLQVAA----------------------------  218 (422)
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHhccC-----------------CcCCccc----------------------------
Confidence              12555555555444333332221111                 0000000                            


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                ++..+.
T Consensus       219 --------------------------------------------------------------------------~~~~~~  224 (422)
T COG0738         219 --------------------------------------------------------------------------PSLGAS  224 (422)
T ss_pred             --------------------------------------------------------------------------cccccc
Confidence                                                                                      000000


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      +.....+++++|.+....++.++.-..-...-.+++.|+.+..|++..+++...+..-.+.++|++++.++.+|+...| 
T Consensus       225 ~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k-  303 (422)
T COG0738         225 GSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK-  303 (422)
T ss_pred             ccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-
Confidence            0001367899999999999999988888888899999998889999999999999999999999999999999998777 


Q ss_pred             HHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhh
Q psy17194        668 LMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  747 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~  747 (871)
                       +..+..+...+.++.....++. ..+..+...|+.++..+|...+...+..+    ++ .+..|..-.+..+|+++-|.
T Consensus       304 -~Laf~a~~~ill~~~~~l~~g~-v~~~~l~~ig~F~simfPTIfslal~~l~----~~-ts~~s~~l~maivGGAiiP~  376 (422)
T COG0738         304 -YLAFYALIAILLLLAVALIGGV-VALYALFLIGLFNSIMFPTIFSLALKNLG----EH-TSVGSGLLVMAIVGGAIIPP  376 (422)
T ss_pred             -HHHHHHHHHHHHHHHHHHhcCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccC----cc-ccccceeeeeheecchHHHH
Confidence             4444443333333333344442 23445556677778777776666666665    22 23333344567789999999


Q ss_pred             hHHHhHhhhChHHHHHHHHHHHHHHH
Q psy17194        748 VAGGIVDAIGFTALNFLIAFMNILYA  773 (871)
Q Consensus       748 ~~g~l~~~~g~~~~~~~~a~~~~~~~  773 (871)
                      +.|++.|+.|....+.....+|.+..
T Consensus       377 l~G~i~d~~g~~~~~~~~pllc~lyV  402 (422)
T COG0738         377 LQGVIADMFGIQLTFLIVPLLCYLYV  402 (422)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            99999999999888775555555544

>KOG0253|consensus

Probab=99.83  E-value=2.5e-18  Score=173.09  Aligned_cols=343  Identities=12%  Similarity=0.044  Sum_probs=226.0

Q ss_pred             CchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHH
Q psy17194        102 GEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLA  181 (871)
Q Consensus       102 ~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a  181 (871)
                      .+..|..++......+..+++-.+|.++|++|||+...+..+...+...+.+.++|+..+.+.|.+.|+|.|. .|...+
T Consensus       110 ~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~  188 (528)
T KOG0253|consen  110 PSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSA  188 (528)
T ss_pred             hhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHH
Confidence            3788999999999999999999999999999999999999999999999999999999999999999999998 788788


Q ss_pred             HhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhh--------
Q psy17194        182 MIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL--------  253 (871)
Q Consensus       182 ~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~--------  253 (871)
                      +-.|.. |..+|...+-.. +.+.+|.++...+...+..++||||.......+..+.+.+.+ ..+|+++-.        
T Consensus       189 ~yle~l-p~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~-w~~ESpRf~~~~G~~~k  265 (528)
T KOG0253|consen  189 IYLEFL-PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLV-WVYESPRFYLAKGDDYK  265 (528)
T ss_pred             HHHHhc-cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHh-hcccCcchhhhcCChHH
Confidence            888865 556788777666 999999999999999999999999998888866655554444 445543100        


Q ss_pred             ---------c------------------cCCCC-----------CCcccchhhhhc---chhHHHHHHHHHHHHHHHHHH
Q psy17194        254 ---------N------------------QKKPE-----------SHSTVPIWKLFM---DPYIAVCSGALLMANVALAFL  292 (871)
Q Consensus       254 ---------~------------------~~~~~-----------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  292 (871)
                               +                  .++++           ++...+...++.   ++....+....+...+.+++.
T Consensus       266 AletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~  345 (528)
T KOG0253|consen  266 ALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGS  345 (528)
T ss_pred             HHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHH
Confidence                     0                  00000           001111122221   112222222333333333332


Q ss_pred             HHHH-----------------HHHHHHhhCC--CchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q psy17194        293 EPTI-----------------SLWIEDNLTT--DNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  353 (871)
Q Consensus       293 ~~~~-----------------~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~  353 (871)
                      .-..                 |.+++...+-  +...--.=..+..+....|.++.+++.||+|||+.+  ...++++++
T Consensus       346 VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM--al~l~~f~i  423 (528)
T KOG0253|consen  346 VLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM--ALSLILFGI  423 (528)
T ss_pred             HHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH--HHHHHHHHH
Confidence            2221                 2222211110  000000112233567788999999999999999954  777777777


Q ss_pred             HHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        354 CCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       354 ~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      +++......+.....+..+..-+...   ..+.....+.-+.+|...|+++.|..+....+|+++.|.+.  +.....-.
T Consensus       424 flfll~~c~~rn~~tvllf~arafis---g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~s  498 (528)
T KOG0253|consen  424 FLFLLTTCKTRNAYTVLLFTARAFIS---GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTS  498 (528)
T ss_pred             HHHHHHHhcCcchhHHHHHHHHHHHh---chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HHhcccee
Confidence            77766544433332222222222222   22445555555668889999999999999999999999998  44444444


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhh
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      ....+.+.+++++.++..+++-
T Consensus       499 l~i~vy~~~~ilagIavcffPi  520 (528)
T KOG0253|consen  499 LPIFVYGALFILAGIAVCFFPI  520 (528)
T ss_pred             ehHHHHHHHHHHHHHHheeeee
Confidence            4445555555555555555443

>TIGR00805 oat sodium-independent organic anion transporter

Probab=99.83  E-value=7.3e-19  Score=204.55  Aligned_cols=267  Identities=10%  Similarity=0.087  Sum_probs=190.4

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch---------------
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST---------------  362 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------  362 (871)
                      ..++++++++..+.|++.+.+.++..++.++.+++.||++|+|++  .++.++.+++.+++++.+               
T Consensus        57 ~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i--~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~  134 (633)
T TIGR00805        57 TTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVI--GIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST  134 (633)
T ss_pred             hhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEE--EecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence            346778999999999999999999999999999999999999955  777888888887776542               


Q ss_pred             ------------------------------------hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHH
Q psy17194        363 ------------------------------------SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYA  406 (871)
Q Consensus       363 ------------------------------------~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~g  406 (871)
                                                          .+..+++++++.|+|.+...+..   ..++.|..|+++|+.+.+
T Consensus       135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~---~~~i~d~~~~~~~~~~~~  211 (633)
T TIGR00805       135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG---ISYIDDFAKSKNSPLYIG  211 (633)
T ss_pred             ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC---chhhhccCCccccHHHHH
Confidence                                                13456678999999988774333   344555667799999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhh---------------------C-hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCch
Q psy17194        407 IADISYSLAYAIGPIVAGGIVDAI---------------------G-FTALNFLIAFMNILYAPVLIYLKNIYDFKPFEN  464 (871)
Q Consensus       407 i~~~~~~lg~~igp~l~g~l~~~~---------------------g-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  464 (871)
                      +.+....+|.++|+.+++.+.+.+                     | |+..|++.+++.++..+.++++++..++...+.
T Consensus       212 i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~  291 (633)
T TIGR00805       212 ILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRV  291 (633)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCccccc
Confidence            999999999999999999988643                     1 566677777766665554444443221110000


Q ss_pred             hhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHH
Q psy17194        465 EANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGAL  544 (871)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l  544 (871)
                      +.+..     +++.    .++.+. +    ...+.                    .                        
T Consensus       292 ~~~~~-----~~~~----~~~~~~-~----~~~~~--------------------~------------------------  313 (633)
T TIGR00805       292 NVDVH-----ETEK----LEKSED-K----SRKKN--------------------S------------------------  313 (633)
T ss_pred             chhhh-----hhhc----cccccc-c----cchhh--------------------h------------------------
Confidence            00000     0000    000000 0    00000                    0                        


Q ss_pred             HhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHH
Q psy17194        545 YQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISL  624 (871)
Q Consensus       545 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~  624 (871)
                                                            +...+....++++++||.++...+..++....++++.+++|.
T Consensus       314 --------------------------------------~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~  355 (633)
T TIGR00805       314 --------------------------------------DITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK  355 (633)
T ss_pred             --------------------------------------hhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                  000000113578999999999999999999999999999999


Q ss_pred             HHHHhcCCCccchhhhhhccch-hhhhhhhhhhhhhhccCch
Q psy17194        625 WIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTY  665 (871)
Q Consensus       625 ~l~~~~g~s~~~~gl~~~~~~~-~~~i~~~~~g~l~d~~~~~  665 (871)
                      |+++.+|+++.++|+++....+ +.+++.+++|++.||++.+
T Consensus       356 yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~  397 (633)
T TIGR00805       356 YLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN  397 (633)
T ss_pred             HHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence            9999999999999999988776 5688999999999999843

Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.

>PF03825 Nuc_H_symport: Nucleoside H+ symporter

Probab=99.82  E-value=3.6e-17  Score=179.27  Aligned_cols=373  Identities=14%  Similarity=0.210  Sum_probs=234.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHH
Q psy17194        278 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      +...+++.....+...++++.|+++ .|+|..++|.+.+...+..++++++.|.++||.++++..+ .+..++.++..+.
T Consensus         7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l-~~~~l~~~~~~~~   84 (400)
T PF03825_consen    7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRIL-ALLSLLSALALLL   84 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHH-HHHHHHHHHHHHH
Confidence            4455666677778888999999987 5899999999999999999999999999999986544332 3444444455555


Q ss_pred             hhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH-HHHHhhhCh---h
Q psy17194        358 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA-GGIVDAIGF---T  433 (871)
Q Consensus       358 ~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~-g~l~~~~g~---~  433 (871)
                      ....++.+.++...++..+......+...+......+     +++.-+|-....+.+|.+++.... +.+....++   .
T Consensus        85 ~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~-----~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~  159 (400)
T PF03825_consen   85 LAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG-----DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTS  159 (400)
T ss_pred             HHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc-----cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhcccccc
Confidence            5566677766665566555554443333333222222     223333444445555665554432 333333332   2


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPA  513 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (871)
                      ..+++.+...++.....+.+++.+.+++                .+           .+.+                   
T Consensus       160 ~~~~i~~~~~~ll~~~~l~lp~~~~~~~----------------~~-----------~~~~-------------------  193 (400)
T PF03825_consen  160 LIFYIAAILSLLLAGFALFLPKTPPKRS----------------AK-----------ESVK-------------------  193 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCccccc----------------cC-----------CCcc-------------------
Confidence            3445444443333322333332110000                00           0000                   


Q ss_pred             cccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh
Q psy17194        514 ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW  593 (871)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  593 (871)
                                                                                              +....+..
T Consensus       194 ------------------------------------------------------------------------~~~~~~~~  201 (400)
T PF03825_consen  194 ------------------------------------------------------------------------KLLGLDAL  201 (400)
T ss_pred             ------------------------------------------------------------------------cccchHHH
Confidence                                                                                    00000125


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHH
Q psy17194        594 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  673 (871)
Q Consensus       594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g  673 (871)
                      +++|+|++....+..++..........+.+.|+++.-|.+....|.++....+..++.-...+++.+|++.++  ++.++
T Consensus       202 ~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~--ll~~a  279 (400)
T PF03825_consen  202 KLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW--LLLLA  279 (400)
T ss_pred             HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH--HHHHH
Confidence            7999999999888888888888888999999997765588888898888888888888889999999999887  56666


Q ss_pred             HHHHhhHHhhhcch-hhhHHHH----HHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHH-HHHHHhHhhh
Q psy17194        674 LVLEGLCCFIIPFS-TSYQMLM----LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS-YSLAYAIGPI  747 (871)
Q Consensus       674 ~~~~~~~l~~~~~~-~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~-~~~g~~~gp~  747 (871)
                      ++..++=..++... ++.+..+    +.....|+..+.....   ...|.-+..|++.++++.|+++.+ ..+|+.+|..
T Consensus       280 ~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a---~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~  356 (400)
T PF03825_consen  280 LVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAA---SVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL  356 (400)
T ss_pred             HHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHH---HHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH
Confidence            66666555555544 3333322    2234567666655443   344444445589999999998865 6799999999


Q ss_pred             hHHHhHhhhChHHH------HHHHHHHHHHHHHHHHHHh
Q psy17194        748 VAGGIVDAIGFTAL------NFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       748 ~~g~l~~~~g~~~~------~~~~a~~~~~~~~~~~~~~  780 (871)
                      ++|+++|++|.+..      +.+.+++.++...+.+.+.
T Consensus       357 igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f  395 (400)
T PF03825_consen  357 IGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILF  395 (400)
T ss_pred             HHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence            99999999886643      3444444444443333333

>KOG1330|consensus

Probab=99.82  E-value=1e-19  Score=190.54  Aligned_cols=366  Identities=13%  Similarity=0.074  Sum_probs=250.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC  354 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~  354 (871)
                      ...+++...+....-+.+...++- .++.+|.++...|++.+.+.+...++.++.|+++||+.|++++  .+|..+..++
T Consensus        35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~--~vG~~iW~~A  111 (493)
T KOG1330|consen   35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVI--AVGIFIWTLA  111 (493)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEE--eeHHHHHHHH
Confidence            344444444444444444444433 6777999999999999999999999999999999999999954  8899999999


Q ss_pred             HHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hh
Q psy17194        355 CFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FT  433 (871)
Q Consensus       355 ~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~  433 (871)
                      .+..++...+|.+.+++.+.|+|.+...+...+.+++.   ++.++|+++++++++...+|..+|-+.++.+.+..+ ||
T Consensus       112 v~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~---f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr  188 (493)
T KOG1330|consen  112 VFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADS---FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWR  188 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhc---CcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceE
Confidence            99999999999999999999999999877777775554   555999999999999999999999999999988887 99


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPA  513 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  513 (871)
                      |.|+..+++.++..++.+++.+...+...++                .. .+.+.    .                    
T Consensus       189 ~af~~~avl~vi~~~L~~~f~~eP~rga~~~----------------~~-~~~~~----~--------------------  227 (493)
T KOG1330|consen  189 WAFRGSAVLGVIVGLLVFLFVREPERGARDE----------------VD-GENKM----V--------------------  227 (493)
T ss_pred             EEEEeehHHHHHHHHHHHhhccCcccccccc----------------cc-cCCcC----C--------------------
Confidence            9999999998888777666554221110000                00 00000    0                    


Q ss_pred             cccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh
Q psy17194        514 ANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW  593 (871)
Q Consensus       514 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  593 (871)
                                                                                           ++.....++++
T Consensus       228 ---------------------------------------------------------------------~~~ts~~kDl~  238 (493)
T KOG1330|consen  228 ---------------------------------------------------------------------KPFTSVWKDLK  238 (493)
T ss_pred             ---------------------------------------------------------------------CCccchHHHHH
Confidence                                                                                 00000112356


Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHh---cCCCccchhhhhhccchhhhhhhhhhhhhhhccCch-----
Q psy17194        594 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN---LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY-----  665 (871)
Q Consensus       594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~---~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~-----  665 (871)
                      .+.+++.+....+.+....+....+.-+.|.+.+..   .|++..+.-++......+..+|...+|.++||+.++     
T Consensus       239 ~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~  318 (493)
T KOG1330|consen  239 VLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSG  318 (493)
T ss_pred             HHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhccccc
Confidence            677777777777777777766667677777766543   466776776777788888999999999999984221     


Q ss_pred             --hh--HHHHHHHHHHhhHHhhhcchhhh-HHHHHHHHHHhhhhhhc-chhhhhhhhhhhhhccccccchHHhHHHHHHH
Q psy17194        666 --QW--LMVAVGLVLEGLCCFIIPFSTSY-QMLMLPICGICFGMALV-DTALLPTLGYLVDVRYVSVYGSIYAIADISYS  739 (871)
Q Consensus       666 --~~--~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~  739 (871)
                        |.  +....+..+.+..+++.+..++. ....+.++.+|.-.... .....++..+.+.   +++|.+++++-..+..
T Consensus       319 ~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~---p~~Rt~a~a~~~~~~h  395 (493)
T KOG1330|consen  319 TLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVP---PSRRTTAYALDTVFEH  395 (493)
T ss_pred             chhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecC---cccccHHHHHHHHHHH
Confidence              11  23334444444444444432222 22223333333322221 1223345666665   9999999999887777


Q ss_pred             HHHhHh-hhhHHHhHhhh-ChH
Q psy17194        740 LAYAIG-PIVAGGIVDAI-GFT  759 (871)
Q Consensus       740 ~g~~~g-p~~~g~l~~~~-g~~  759 (871)
                      +-+..+ |.+.|.+.|+. ||.
T Consensus       396 ~fgd~~~p~ivGilsd~l~g~~  417 (493)
T KOG1330|consen  396 IFGDAASPYIVGILSDKLRGYK  417 (493)
T ss_pred             HhccCCCcceehhHHHHhhCCC
Confidence            755554 55999998863 444

>PRK10429 melibiose:sodium symporter; Provisional

Probab=99.81  E-value=1.8e-17  Score=188.81  Aligned_cols=356  Identities=11%  Similarity=0.082  Sum_probs=223.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh----hcCchhHHHHHHHHHHHHHHHHH
Q psy17194        282 LLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK----LYPTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      .+..+.....+..+++.|+.+.+|+++..+|.++...-+...+..++.|+++|    |+||||.++ ..+....+++.++
T Consensus        15 ~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~i-l~g~i~~~i~~~l   93 (473)
T PRK10429         15 AFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWI-LIGTLANSVVLFL   93 (473)
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhH-hhhhHHHHHHHHH
Confidence            33445566677788899999999999999999999999999999999999999    569877553 3445555555444


Q ss_pred             hhcchh------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Q psy17194        358 IPFSTS------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-  430 (871)
Q Consensus       358 ~~~~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-  430 (871)
                      +...++      ...+++..++..++.........+...++.+.  +++|.+..+......++|+.+.+.+...+.+.. 
T Consensus        94 lf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~--~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g  171 (473)
T PRK10429         94 LFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLD--KREREQLVPYPRFFASLAGFVTAGFTLPFVNYVG  171 (473)
T ss_pred             HHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            433221      12233334455566666655556666665532  488999888877777777777666655444333 


Q ss_pred             ------ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccccc
Q psy17194        431 ------GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQET  504 (871)
Q Consensus       431 ------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (871)
                            ||+....+.+++.++...+.++..+++  ..           +++  .+.   ++ +++               
T Consensus       172 ~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~--~~-----------~~~--~~~---~~-~~~---------------  217 (473)
T PRK10429        172 GGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEV--YS-----------SDN--QVS---AE-GSH---------------  217 (473)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHHcCceec--CC-----------ccc--ccc---cc-ccC---------------
Confidence                  344444444444333322222211100  00           000  000   00 000               


Q ss_pred             ccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCC
Q psy17194        505 SIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP  584 (871)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  584 (871)
                                                                                                      
T Consensus       218 --------------------------------------------------------------------------------  217 (473)
T PRK10429        218 --------------------------------------------------------------------------------  217 (473)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCc
Q psy17194        585 ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT  664 (871)
Q Consensus       585 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~  664 (871)
                       .+.+..++.+++||+++...+..++.+...+......+.|++...+ +....+++.....++.+++.++.+++.||+|+
T Consensus       218 -~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk  295 (473)
T PRK10429        218 -LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSR  295 (473)
T ss_pred             -CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence             0000123557799999888877777777666665555544544433 55666777777778889999999999999999


Q ss_pred             hhhHHHHHHHHHHhhHHhhh-----cchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHH
Q psy17194        665 YQWLMVAVGLVLEGLCCFII-----PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIAD  735 (871)
Q Consensus       665 ~~~~~~~~g~~~~~~~l~~~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~  735 (871)
                      |+.  ...+..+..++.+.+     ....+.+.+++..+..+++.+.......++..+.+|..    .+++.|...|..+
T Consensus       296 k~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~  373 (473)
T PRK10429        296 RIL--WAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQT  373 (473)
T ss_pred             HHH--HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHH
Confidence            884  334443333222221     11334445555556667777776666667777777732    2445677999999


Q ss_pred             HHHHHHHhHhhhhHHHhHhhhCh
Q psy17194        736 ISYSLAYAIGPIVAGGIVDAIGF  758 (871)
Q Consensus       736 ~~~~~g~~~gp~~~g~l~~~~g~  758 (871)
                      ++..+|.++|+.+.|.+.+..||
T Consensus       374 ~~~K~~~al~~~i~g~~l~~~Gy  396 (473)
T PRK10429        374 MVVKGGSAFAAFFIGVVLGLIGY  396 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999987776

>PRK09669 putative symporter YagG; Provisional

Probab=99.81  E-value=1.3e-17  Score=188.60  Aligned_cols=347  Identities=11%  Similarity=0.086  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh----cCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        285 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL----YPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       285 ~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      .+.....+..+++.|+.+.+|+++..+|.+.++..+...+..++.|+++||    +||||.++ ..+....++..++...
T Consensus        21 ~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~i-l~~~~~~~i~~~l~f~   99 (444)
T PRK09669         21 CNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYL-LWFAIPFGVVCLLTFY   99 (444)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhH-HHHHHHHHHHHHHHHh
Confidence            344455567788888999999999999999999999999999999999999    67766543 3343444444433322


Q ss_pred             chh------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Q psy17194        361 STS------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI----  430 (871)
Q Consensus       361 ~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~----  430 (871)
                      .++      ....++..++.+.+.........+...++.+  ++++|++..+.......+|..+++.+...+....    
T Consensus       100 ~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~--~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~  177 (444)
T PRK09669        100 TPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITN--DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGD  177 (444)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            221      2333333444455555554444445444443  2478898888888888888888877665555433    


Q ss_pred             ---ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        431 ---GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       431 ---g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                         ||+..+.+.+++.++...+.++..+++.+             +++         +  ++ .                
T Consensus       178 ~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~-------------~~~---------~--~~-~----------------  216 (444)
T PRK09669        178 EQKGYFYAMMVMGLLGVVLFFCCFFMTKERYT-------------PEV---------D--NS-S----------------  216 (444)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhCCeEEecC-------------CCC---------c--CC-C----------------
Confidence               46666666655554443333222110000             000         0  00 0                


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                     +
T Consensus       217 -------------------------------------------------------------------------------~  217 (444)
T PRK09669        217 -------------------------------------------------------------------------------S  217 (444)
T ss_pred             -------------------------------------------------------------------------------C
Confidence                                                                                           0


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHH-HHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWI-EDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ  666 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l-~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~  666 (871)
                      ....++.++|||+++...+..++.......... +..|+ +...+ ++...+.++....+..+++.++.+++.||+++|+
T Consensus       218 ~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~  295 (444)
T PRK09669        218 VWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR  295 (444)
T ss_pred             HHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence            001246788999988877766665555544333 33444 33333 3334445555556777788889999999999887


Q ss_pred             hHHHHHHHHHHhh-HHhhhcc-hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHHHHH
Q psy17194        667 WLMVAVGLVLEGL-CCFIIPF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISYSL  740 (871)
Q Consensus       667 ~~~~~~g~~~~~~-~l~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~~~~  740 (871)
                      .  ...+..+.++ ++.++.. ..+.+.+++..+..+++.+...+...++..+.+|..    .+++.|...|.++++..+
T Consensus       296 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl  373 (444)
T PRK09669        296 A--FKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL  373 (444)
T ss_pred             H--HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH
Confidence            4  3344433332 2222222 344555566667778888887777777888887632    244578889999999999


Q ss_pred             HHhHhhhhHHHhHhhhCh
Q psy17194        741 AYAIGPIVAGGIVDAIGF  758 (871)
Q Consensus       741 g~~~gp~~~g~l~~~~g~  758 (871)
                      |.++||.++|.+.+..||
T Consensus       374 g~alg~~i~g~ll~~~Gy  391 (444)
T PRK09669        374 GLAIGGAVVGWILAWVDY  391 (444)
T ss_pred             HHHHHHHHHHHHHHHcCC
Confidence            999999999999998876

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.80  E-value=7.5e-24  Score=240.89  Aligned_cols=387  Identities=16%  Similarity=0.100  Sum_probs=246.5

Q ss_pred             HHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHh
Q psy17194         49 STALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGAL  128 (871)
Q Consensus        49 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l  128 (871)
                      .++.+.++++...+....+.......                ++.....++.+.+..+.+++.+...++..++++++|.+
T Consensus         6 ~~~~~~~g~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~   69 (451)
T PF00083_consen    6 SLGGFLFGYDLGLIGSFASLLGFLQF----------------FGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFL   69 (451)
T ss_pred             HHHHHHHHHHHHHHhhHHhhhhhhhc----------------cccccccccccchHHHHHHHHHHHHhhhcccccccccc
Confidence            44457777877777655554442211                01111111112256789999999999999999999999


Q ss_pred             hhhhCCchHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHH
Q psy17194        129 IDRIGYDLPMMIGLCIMFLSTALFACGR---SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFIS  205 (871)
Q Consensus       129 ~Dr~Grr~~l~~~~~~~~i~~~l~~~a~---s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~  205 (871)
                      +||+|||+.++++.++..++.++.++++   +++.+.++|+++|++.|...+....++.|.. |+++|++..++.+....
T Consensus        70 ~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~-~~~~R~~~~~~~~~~~~  148 (451)
T PF00083_consen   70 ADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIA-PPKHRGFLSSLFQLFWA  148 (451)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccc
Confidence            9999999999999999999999999999   9999999999999999999999999999975 77899999999999999


Q ss_pred             HHHHHhHHHHHHHHhhh---CChhHHHHHHHHHHHHHHHHHHhcccchhhhccC-------------------CCC----
Q psy17194        206 FGCLVAPPFGGALYQFA---GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK-------------------KPE----  259 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~---gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~-------------------~~~----  259 (871)
                      +|.+++..++..+.+..   +||..+++.+++.++..+. .++.||+|.-.-.+                   +++    
T Consensus       149 ~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~  227 (451)
T PF00083_consen  149 LGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEI  227 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccc-ccccccccceeccccccccccccccccccccccccccccc
Confidence            99999988876654433   4999999988888765444 45667665210000                   000    


Q ss_pred             -C--Cc----ccchhhhhcchh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHH
Q psy17194        260 -S--HS----TVPIWKLFMDPY----IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVI  328 (871)
Q Consensus       260 -~--~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~  328 (871)
                       +  +.    ...++++++++.    +...+...............++...+.+..+.+..  -.......+...++.++
T Consensus       228 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~  305 (451)
T PF00083_consen  228 KAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLL  305 (451)
T ss_pred             ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccc
Confidence             0  00    012344555532    22222222222222222222333333444565555  11222334555667777


Q ss_pred             HHHHHhhcCchhHHHHHHHHHHHHHHHHHhh-----cchh----hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy17194        329 TVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP-----FSTS----YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS  399 (871)
Q Consensus       329 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~  399 (871)
                      +..+.||+|||+.+  ..+..+.+++.+.++     ...+    ....++...+...+.+..  ..........|.+|.+
T Consensus       306 ~~~~~~~~GRr~~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g--~~~~~~~~~~ElfPt~  381 (451)
T PF00083_consen  306 AIFLIDRFGRRKLL--IIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLG--WGPLPWIYTAELFPTK  381 (451)
T ss_pred             cccccccccccccc--ccccccccccccccccccccccccccccccccceeeeecccccccc--cccccccccccccccc
Confidence            78999999999855  455555444444442     1111    111122222222222211  0112223446677889


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHH-HHHHhhcccC
Q psy17194        400 VYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPV-LIYLKNIYDF  459 (871)
Q Consensus       400 ~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~  459 (871)
                      .|+++.++......+++++++.+...+.+..+....+++.+.+.++..+. .+++++++++
T Consensus       382 ~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~  442 (451)
T PF00083_consen  382 VRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGK  442 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCC
Confidence            99999999999999999999999998888877455555555555444443 4445554443

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>PF13347 MFS_2: MFS/sugar transport protein

Probab=99.80  E-value=1.2e-17  Score=188.11  Aligned_cols=352  Identities=13%  Similarity=0.162  Sum_probs=251.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh----hcCchhHHHHHHHHHHHHHHHHHhh
Q psy17194        284 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK----LYPTYQWLMVAVGLVLEGLCCFIIP  359 (871)
Q Consensus       284 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~~~~~~~~~~~  359 (871)
                      ...........+++.|+.+..|+++..+|.+.....+...+..++.|.++|    |+||||.++ ..+....+++.+++.
T Consensus        12 ~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~-l~g~i~~~~~~~llf   90 (428)
T PF13347_consen   12 GYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWI-LIGAILLALSFFLLF   90 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEe-ehhhHHHHHHHHHhh
Confidence            334444555667788889999999999999999989999999999999999    789888653 445555556555554


Q ss_pred             cc-h-------hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        360 FS-T-------SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       360 ~~-~-------~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      .. +       ......+..+++.++.........+...++.+.  +++|.+..+.......+|..+...+.+.+.+..|
T Consensus        91 ~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~--~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g  168 (428)
T PF13347_consen   91 SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPD--PDERTRLSSWRMIFSMIGSLLASFLAPILVSWFG  168 (428)
T ss_pred             ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcccccc--HhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence            43 2       112234444555666666544444555555443  4789999999999888888877777777776544


Q ss_pred             -------hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccccc
Q psy17194        432 -------FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQET  504 (871)
Q Consensus       432 -------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (871)
                             |++..++.+++.++...+..+..++++++                      .++.                  
T Consensus       169 ~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~----------------------~~~~------------------  208 (428)
T PF13347_consen  169 GGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVE----------------------VTEQ------------------  208 (428)
T ss_pred             cCccchHHHHHHHHHHHHHHHHhhhhhheeeecccc----------------------cccc------------------
Confidence                   66666666665555444433322210000                      0000                  


Q ss_pred             ccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCC
Q psy17194        505 SIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP  584 (871)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  584 (871)
                                                                                                    ++
T Consensus       209 ------------------------------------------------------------------------------~~  210 (428)
T PF13347_consen  209 ------------------------------------------------------------------------------EK  210 (428)
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          00


Q ss_pred             CCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCc
Q psy17194        585 ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT  664 (871)
Q Consensus       585 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~  664 (871)
                      ....+..++.+++||++....+..++...+........+.|.++..|.+ ...+.+.....++.+++.++.++++||+|+
T Consensus       211 ~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk  289 (428)
T PF13347_consen  211 KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGK  289 (428)
T ss_pred             ccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence            0000113577899999999999999988888888888888888888887 566777778888999999999999999999


Q ss_pred             hhhHHHHHHHHHHhhHHhhhcch--hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHHH
Q psy17194        665 YQWLMVAVGLVLEGLCCFIIPFS--TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISY  738 (871)
Q Consensus       665 ~~~~~~~~g~~~~~~~l~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~~  738 (871)
                      ||  ....+..+.+++.+++.+.  ++.+...+..+..|++.+.......++..+.+|..    .+++.|...|++++..
T Consensus       290 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~  367 (428)
T PF13347_consen  290 KK--VYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFI  367 (428)
T ss_pred             ee--ehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhh
Confidence            98  5566777776666665544  46777778888888888888888888888888754    2466899999999999


Q ss_pred             HHHHhHhhhhHHHhHhhhChH
Q psy17194        739 SLAYAIGPIVAGGIVDAIGFT  759 (871)
Q Consensus       739 ~~g~~~gp~~~g~l~~~~g~~  759 (871)
                      .++..+++.+.|.+.+..||.
T Consensus       368 k~~~~la~~i~g~~l~~~Gy~  388 (428)
T PF13347_consen  368 KIGQGLAGAIVGLLLALVGYD  388 (428)
T ss_pred             HHHHHHHHHHHHHHHHHhCcC
Confidence            999999999999998876643

>PRK15462 dipeptide/tripeptide permease D; Provisional

Probab=99.80  E-value=3.8e-16  Score=173.75  Aligned_cols=425  Identities=13%  Similarity=0.069  Sum_probs=239.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQWLMVAVGLVLE  351 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~  351 (871)
                      +.++.++...+...+.++.+..++|.|+++.+|++..+++.+.+.+.....++.+++|+++||+ ||||.+  ..+.++.
T Consensus         9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i--liG~il~   86 (493)
T PRK15462          9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV--MLGALLM   86 (493)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH--HHHHHHH
Confidence            4456666667777788888899999999999999999999999999999999999999999999 999955  6677777


Q ss_pred             HHHHHHhhcch-hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc--chhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        352 GLCCFIIPFST-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS--VYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       352 ~~~~~~~~~~~-~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~--~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      .++.+++.... +...+.+...+..+|.+...+...+...+   .+|++  +|.++.++.....++|+.++|.+.|++.+
T Consensus        87 ~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~e---lfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~  163 (493)
T PRK15462         87 AIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGE---LYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE  163 (493)
T ss_pred             HHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHH---HCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh
Confidence            77766554332 22223334444556666554433444333   34433  68999999999999999999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCC
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDE  508 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  508 (871)
                      ..||++.|.+.++..+++++..+..++...+....         +++            +.++  +   +          
T Consensus       164 ~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~---------~~~------------~~~~--~---~----------  207 (493)
T PRK15462        164 EYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGV---------NKK------------VLRA--T---N----------  207 (493)
T ss_pred             hhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCC---------CCC------------Cchh--h---h----------
Confidence            99999999987765555444443322211100000         000            0000  0   0          


Q ss_pred             CcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCc
Q psy17194        509 NKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHS  588 (871)
Q Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  588 (871)
                                  ........ ..+..+..+.+...+.. .++  .-......++.... .++.+.+.+.+     ++.+ 
T Consensus       208 ------------~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~er-  264 (493)
T PRK15462        208 ------------FLLPNWGW-LLVLLVATPALITVLFW-KEW--SVYALIVATIIGLG-VLAKIYRKAEN-----QKQR-  264 (493)
T ss_pred             ------------HHHHHHHH-HHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHH-HHHHHHHhcCC-----HHHH-
Confidence                        00000000 00000000001000000 011  11111111111111 11111110000     0000 


Q ss_pred             ccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc-----CCCccchhhhhhccchhhhhhhhhhhhhhhccC
Q psy17194        589 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-----TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  663 (871)
Q Consensus       589 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-----g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~  663 (871)
                          +++   ..+....+...+.+..+....+.+.+|-++.-     |++. ..+..-+...+..++.+++.+++-.|..
T Consensus       265 ----~r~---~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p~~~~qslNp~~ii~l~P~~a~lw~~l~  336 (493)
T PRK15462        265 ----KEL---GLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTV-PTAMFQSINAFAVMLCGVFLAWVVKESV  336 (493)
T ss_pred             ----hhH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceee-CHHHHHhHhHHHHHHHHHHHHHHHHHHh
Confidence                111   12233344455555566677777777776542     3332 3455556667777777776666644442


Q ss_pred             ch-h----hHHHHHHHHHHhhHHhhhcc-------h--hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccch
Q psy17194        664 TY-Q----WLMVAVGLVLEGLCCFIIPF-------S--TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGS  729 (871)
Q Consensus       664 ~~-~----~~~~~~g~~~~~~~l~~~~~-------~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~  729 (871)
                      ++ |    ..-..+|+++.+++++.+..       .  .+.++++...+..++|.-...|.-.+..+...+   ++.+|.
T Consensus       337 ~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP---~~~~g~  413 (493)
T PRK15462        337 AGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEI---PGVTGV  413 (493)
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhCh---HHHHHH
Confidence            21 1    11256788888888766532       1  244556777788888888777766666666655   788899


Q ss_pred             HHhHHHHH-HHHHHhHhhhhHHHhHh------------hhChHHHHHHHHHHHHHH
Q psy17194        730 IYAIADIS-YSLAYAIGPIVAGGIVD------------AIGFTALNFLIAFMNILY  772 (871)
Q Consensus       730 a~g~~~~~-~~~g~~~gp~~~g~l~~------------~~g~~~~~~~~a~~~~~~  772 (871)
                      .+|+.... ..+|..++..+.+...+            ...+...|...+...++.
T Consensus       414 ~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~  469 (493)
T PRK15462        414 LTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC  469 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence            99998542 24555555444443321            113566787777766655

>TIGR00788 fbt folate/biopterin transporter

Probab=99.79  E-value=3.3e-17  Score=185.13  Aligned_cols=386  Identities=15%  Similarity=0.070  Sum_probs=237.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC---c-hhHHHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP---T-YQWLMVAVGLV  349 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g---~-~~~~~~~~~~~  349 (871)
                      .+..+...++..+.. ......++.++++++|.+..+++...+...+...+-.+ +|.++||++   + ||.+ +..+.+
T Consensus        27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~-l~~~~~  103 (468)
T TIGR00788        27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWY-LVLSGL  103 (468)
T ss_pred             HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHH-HHHHHH
Confidence            334444456666666 66677778889999999999998888888888887655 999999996   2 3332 233333


Q ss_pred             HH-HHHHHHhhcchhhHHH-HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        350 LE-GLCCFIIPFSTSYQML-MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       350 ~~-~~~~~~~~~~~~~~~l-~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      +. .+....++..++.... .+..++.+++.+......-....+..+ .+++.++...+.......+|..+++.++|.+.
T Consensus       104 l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~  182 (468)
T TIGR00788       104 LGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL  182 (468)
T ss_pred             HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence            33 2333333433343333 335566677777765555555555554 23334444555555566789999999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      +..||+..|++.+++.++......+.++.+.....         ...++  +         ...  ......        
T Consensus       183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~---------~~~~~--~---------~~~--~~~~~~--------  232 (468)
T TIGR00788       183 DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRP---------RIGTY--L---------EMN--MALLTL--------  232 (468)
T ss_pred             HhcCcchHHHHHHHHHHHHHHHHHhcccccccccc---------ccccc--c---------hhh--hhhhhh--------
Confidence            99999999999887776664444444331100000         00000  0         000  000000        


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                        ++                            .....          +
T Consensus       233 ----------------------------------~~----------------------------~~~~~----------~  240 (468)
T TIGR00788       233 ----------------------------------GV----------------------------LANVK----------V  240 (468)
T ss_pred             ----------------------------------hH----------------------------HHHHH----------H
Confidence                                              00                            00000          0


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      .....++.+++|.++...+..++.+....+....+-.+.++.+|+++...|+++.+.+++.+++....+++.+|++.|+ 
T Consensus       241 ~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~-  319 (468)
T TIGR00788       241 QILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL-  319 (468)
T ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH-
Confidence            0012355678888877665555522211111111111334578999999999999999999999999999999999877 


Q ss_pred             HHHHHHHHHHhhHHhhhc-----ch-----hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHH
Q psy17194        668 LMVAVGLVLEGLCCFIIP-----FS-----TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS  737 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~~-----~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~  737 (871)
                       ...++.++.+++.+...     +.     .+.+.++...++.+++.+....+.....++..+   ++..|+.+|+++.+
T Consensus       320 -~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p---~~~egt~~al~~s~  395 (468)
T TIGR00788       320 -LFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCP---SGCESSVFALLASI  395 (468)
T ss_pred             -HHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCC---CCceehHHHHHHHH
Confidence             55666666665543321     11     122223344455556656655666666666555   88999999999999


Q ss_pred             HHHHHhHhhhhHHHhHhhhC-----hHHHHHHHHHHHH
Q psy17194        738 YSLAYAIGPIVAGGIVDAIG-----FTALNFLIAFMNI  770 (871)
Q Consensus       738 ~~~g~~~gp~~~g~l~~~~g-----~~~~~~~~a~~~~  770 (871)
                      +++|+.+|+.++|.+.++.|     ++..+.+..+..+
T Consensus       396 ~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~  433 (468)
T TIGR00788       396 LHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSL  433 (468)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence            99999999999999999988     6655554443333

The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.79  E-value=7.8e-16  Score=161.43  Aligned_cols=347  Identities=16%  Similarity=0.119  Sum_probs=249.0

Q ss_pred             cccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhC-----CchHHHH-HHHHHHHHHHHHHhh-----h-------hH
Q psy17194         97 REHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIG-----YDLPMMI-GLCIMFLSTALFACG-----R-------SY  158 (871)
Q Consensus        97 ~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~-~~~~~~i~~~l~~~a-----~-------s~  158 (871)
                      .+|++.+....+.+.++..+... ..+.+|+.+|+.+     ||..+++ |.++.+.+..+..++     .       +.
T Consensus         7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~   85 (403)
T PF03209_consen    7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF   85 (403)
T ss_pred             HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence            34556688999999998888765 6999999999998     7766554 667666666665543     2       12


Q ss_pred             --H--HHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChh---HHHHH
Q psy17194        159 --G--VLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEI---PFLIL  231 (871)
Q Consensus       159 --~--~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~---~f~~~  231 (871)
                        +  ...+...+.|+|.+...+...++++|.. |+|+|+++.++...+.-+|.+++.++.+.+.+.++-.-   ++...
T Consensus        86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~-~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~  164 (403)
T PF03209_consen   86 WLGLALAALAFLLYGLGVHASGTSFLALLADLA-PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV  164 (403)
T ss_pred             HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcC-CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence              2  3445678899999999999999999984 78999999999999999999999999999888766322   22223


Q ss_pred             HHHHHHHHHHHHHhcccchhhhcc---CCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Q psy17194        232 AFVSLLDGFMLLLVMKPVKEQLNQ---KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDN  308 (871)
Q Consensus       232 ~~~~l~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~  308 (871)
                      +++.++..++..+-. |++.....   ++++......+++++.+|+...++...++....+..-...+-+|--+.+|++.
T Consensus       165 a~i~~~l~~ia~wg~-E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv  243 (403)
T PF03209_consen  165 ALIALLLNLIALWGQ-EPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSV  243 (403)
T ss_pred             HHHHHHHHHHHHHhc-ccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCH
Confidence            333333232322222 22222111   11112223456677788988888888888888888888888899999999999


Q ss_pred             hhHHHHHHhhHHhHHHHHHHHHHHHh-hcCchhHHHHHHHHHHHHHHHHH---hhcchhhHHHHHHHHHHHHHHhhhhhh
Q psy17194        309 WKIGMIWLPAFFPHVFGVVITVKLAK-LYPTYQWLMVAVGLVLEGLCCFI---IPFSTSYQMLMLPICGICFGMALVDTA  384 (871)
Q Consensus       309 ~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~g~g~~~~~~~  384 (871)
                      .+..-+......+..++....|++.. |.++++..  ..+.....++..+   .+...+.+.+....+++|++.|.....
T Consensus       244 ~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a--~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vg  321 (403)
T PF03209_consen  244 GETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTA--ALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVG  321 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH--HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHH
Confidence            99999999999999999999898877 45555533  3444433333333   344567788888889999999998555


Q ss_pred             hhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh----------ChhhHHHHHHHHHHHHHHHHH
Q psy17194        385 LLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI----------GFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       385 ~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~----------g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      ..+.+.++.   .+++.|..+|.+...+.++..++..++|.+.|..          +|..+|.+-++..++++.+..
T Consensus       322 als~mM~lt---~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~  395 (403)
T PF03209_consen  322 ALSLMMDLT---SAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG  395 (403)
T ss_pred             HHHHHHhCC---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            545544444   4488899999999999999999999999988742          356666666655555544443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PRK11462 putative transporter; Provisional

Probab=99.78  E-value=4.2e-16  Score=176.08  Aligned_cols=348  Identities=10%  Similarity=0.062  Sum_probs=215.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh----cCchhHHHHHHHHHHHHHHHHHhhc
Q psy17194        285 ANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL----YPTYQWLMVAVGLVLEGLCCFIIPF  360 (871)
Q Consensus       285 ~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~~~~~~~~  360 (871)
                      .+.....+..++..|+.+..|+++..+|.++...-+.-.+.-++.|.++||    +||||.++. .+....++..+++..
T Consensus        21 ~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il-~g~i~~~i~~~llf~   99 (460)
T PRK11462         21 SHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVL-FGALPFGIVCVLAYS   99 (460)
T ss_pred             hhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHh-HHHHHHHHHHHHHHh
Confidence            345556666788888999999999999999999999999999999999996    588776543 343444444444432


Q ss_pred             chh------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC---
Q psy17194        361 STS------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG---  431 (871)
Q Consensus       361 ~~~------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g---  431 (871)
                      .++      .....+..+++.++.........++..++.+.  +++|++..+....+..+|..+++.+...+.+..|   
T Consensus       100 ~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~  177 (460)
T PRK11462        100 TPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDN  177 (460)
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence            221      22334444556677777766666666666654  5899999999999999998888888776665543   


Q ss_pred             ----hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        432 ----FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       432 ----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                          |.....+.+++.+++..+.+...+++.+.             +   .         + +.      .         
T Consensus       178 ~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~-------------~---~---------~-~~------~---------  216 (460)
T PRK11462        178 KPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA-------------P---P---------T-TT------S---------  216 (460)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC-------------C---c---------c-CC------C---------
Confidence                55555555544444333332221100000             0   0         0 00      0         


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                                                                                                      
T Consensus       217 --------------------------------------------------------------------------------  216 (460)
T PRK11462        217 --------------------------------------------------------------------------------  216 (460)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      .+..++.+++||.+.......++..............|.+...|. +...+.++....++.+++.++++++.||+++|+.
T Consensus       217 ~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~  295 (460)
T PRK11462        217 MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTI  295 (460)
T ss_pred             HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH
Confidence            000135677888887766555555555444444444445444453 3345566677788888999999999999998774


Q ss_pred             HHHHHHHHHHhhHHhhhcc-hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHHHHHHH
Q psy17194        668 LMVAVGLVLEGLCCFIIPF-STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADISYSLAY  742 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~~~~g~  742 (871)
                      +.... ......++.++.. ..+...+.+..+..|++.+...+....+..+.+|..    ..+..|...+..++.+.+|.
T Consensus       296 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~  374 (460)
T PRK11462        296 FWWTN-ALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGL  374 (460)
T ss_pred             HHHHH-HHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHH
Confidence            32111 1111112222111 222222333344455655555444456677777632    23445666788889999999


Q ss_pred             hHhhhhHHHhHhhhCh
Q psy17194        743 AIGPIVAGGIVDAIGF  758 (871)
Q Consensus       743 ~~gp~~~g~l~~~~g~  758 (871)
                      ++|+.+.|.+.+..||
T Consensus       375 alg~~i~g~iL~~~Gy  390 (460)
T PRK11462        375 AFGGALIGWMLAYGGY  390 (460)
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            9999999999887666

>KOG2615|consensus

Probab=99.78  E-value=1.5e-17  Score=169.14  Aligned_cols=333  Identities=14%  Similarity=0.115  Sum_probs=211.4

Q ss_pred             CCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhh
Q psy17194        306 TDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTAL  385 (871)
Q Consensus       306 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~  385 (871)
                      .+....|.+-+.+.+...+.++.+|.++||+|||.++  ..+.+..++...+.+.+.++..+++.+++.|+.-+..    
T Consensus        65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvl--l~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl----  138 (451)
T KOG2615|consen   65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVL--LACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL----  138 (451)
T ss_pred             ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch----
Confidence            3556778999999999999999999999999999965  7788888888888899999966666799999988876    


Q ss_pred             hhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh---hhChhhHHHHHHHHHH---H-HHHHHHHHhhccc
Q psy17194        386 LPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD---AIGFTALNFLIAFMNI---L-YAPVLIYLKNIYD  458 (871)
Q Consensus       386 ~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~---~~g~~~~f~~~~~~~~---~-~~~~~~~~~~~~~  458 (871)
                      ...-+.+.|..++++|+.+++.++...++|.++||.++|++.+   ..|-.+.++-.-.+.+   . .....++++++-.
T Consensus       139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~  218 (451)
T KOG2615|consen  139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLP  218 (451)
T ss_pred             HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence            3334445555566999999999999999999999999999988   3442222221111111   1 1222334444322


Q ss_pred             CCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCcccc
Q psy17194        459 FKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETP  538 (871)
Q Consensus       459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  538 (871)
                      .+++.++    ..+     .++..+++        .+....       +     .                         
T Consensus       219 ~rk~~~~----~~~-----~~~~~~~~--------~~~~~~-------~-----~-------------------------  244 (451)
T KOG2615|consen  219 LRKRNDE----HST-----LQEAADDR--------LALLKF-------A-----R-------------------------  244 (451)
T ss_pred             chhhccc----ccc-----hhhhhhhh--------hhhcch-------h-----h-------------------------
Confidence            1111100    000     00000000        000000       0     0                         


Q ss_pred             chhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchh------HH-HHHHHHHHH
Q psy17194        539 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPY------IA-VCSGALLMA  611 (871)
Q Consensus       539 ~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~-~~~~~~~~~  611 (871)
                                                       +.+                  ...+||++      .+ ...+-.++.
T Consensus       245 ---------------------------------~~~------------------v~~lrn~p~~~~i~~~~i~~l~~~ly  273 (451)
T KOG2615|consen  245 ---------------------------------IFK------------------VAALRNPPLLDFISVLRIFGLHYFLY  273 (451)
T ss_pred             ---------------------------------hhh------------------hhhhcCccccchHHHHHHHHHHHHHH
Confidence                                             000                  00111111      11 112223333


Q ss_pred             HHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC--chhhHHHHHHHHHHhhHHhhhcchhh
Q psy17194        612 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP--TYQWLMVAVGLVLEGLCCFIIPFSTS  689 (871)
Q Consensus       612 ~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~--~~~~~~~~~g~~~~~~~l~~~~~~~~  689 (871)
                      ...+-++..+.+.+....+|+++.+.|.+++..++.+.+.+....+..||..  .+.  ....++.+....++++++...
T Consensus       274 ~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a--~l~~~l~~~vP~~llls~~~~  351 (451)
T KOG2615|consen  274 LELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKA--VLLFSLLLIVPAFLLLSLART  351 (451)
T ss_pred             HHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhh--HHHHHHHHHHHHHHHHhcccc
Confidence            3333344444444545679999999999999999999998888888888765  333  444555555555666666555


Q ss_pred             hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHh
Q psy17194        690 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  754 (871)
Q Consensus       690 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~  754 (871)
                      ...+........+......+.++.+.....+   .+++|++.|+..+..+++-++||.+.|....
T Consensus       352 ~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~---~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~  413 (451)
T KOG2615|consen  352 PVVLYLGSTLKSFSTASVVTCLTSLVHKYGP---QSQRGTLNGIFRSLGALARAIGPLVSGVIFS  413 (451)
T ss_pred             chhhhHHHHHHHHHHHHhhHHHHHHHHhcCC---cccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence            5555566666666666555555555544444   7899999999999999999999999998765

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.76  E-value=1.1e-16  Score=166.75  Aligned_cols=344  Identities=14%  Similarity=0.098  Sum_probs=247.4

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchH-HHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHhhhhhhhhh
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLP-MMIGLCIMFLSTALFACGRS---YGVLFFARSLQGVGSAFADTS  178 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~-l~~~~~~~~i~~~l~~~a~s---~~~l~~~r~l~G~~~g~~~~~  178 (871)
                      +.+..|...++..+..++.+|+.|.++|+.|+||. +-...++..++..+..++++   ++..++...+..++.......
T Consensus        56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf  135 (438)
T COG2270          56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF  135 (438)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence            56788999999999999999999999999997665 44555556666666666644   445555778889999999999


Q ss_pred             HHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHH--HHH-H---------------hhhCChhHHHHHHHHHHHHHH
Q psy17194        179 GLAMIADRFTEENERSQALGIALAFISFGCLVAPPFG--GAL-Y---------------QFAGKEIPFLILAFVSLLDGF  240 (871)
Q Consensus       179 ~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~--~~l-~---------------~~~gwr~~f~~~~~~~l~~~i  240 (871)
                      ..+++.|.. ++++-++..+.-.....+|..+.-+..  +.+ .               +...-|..+.+.++-.++..+
T Consensus       136 yds~L~~~~-~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i  214 (438)
T COG2270         136 YDSMLPRLT-TKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL  214 (438)
T ss_pred             hhhHhhhhc-CccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence            999999975 666767766665555556655544432  111 1               122468889998888888888


Q ss_pred             HHHHhcccchhhhccCCC-----CCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHH
Q psy17194        241 MLLLVMKPVKEQLNQKKP-----ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW  315 (871)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~  315 (871)
                      ..++..++.++...+..+     -++.....++..+++.+...++..++..=+......+...|-..++|++..+..++.
T Consensus       215 Pm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g  294 (438)
T COG2270         215 PMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIG  294 (438)
T ss_pred             HHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHH
Confidence            887777765432111100     011223456677788888888888888888888888888999989999999999999


Q ss_pred             HhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy17194        316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDV  395 (871)
Q Consensus       316 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~  395 (871)
                      ....+..++|+++.|++.||+|.|+++  ..++++..+..+...+.......++..++.|...|......-   +++...
T Consensus       295 ~~~~vvA~lg~ii~g~Ld~rfg~k~vl--~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SR---Sy~~~l  369 (438)
T COG2270         295 IALSVVAALGAIIAGFLDERFGSKPVL--MIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSR---SYLARL  369 (438)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceee--hHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHH---HHHHHh
Confidence            999999999999999999999999855  555555555444443333333344445666777776633333   344555


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHHHHHHHHH
Q psy17194        396 RYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       396 ~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      .|+++-++.+|+++.....++.+||.+.+.+.+..| -|..+....++.++..+++..
T Consensus       370 vp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~  427 (438)
T COG2270         370 VPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR  427 (438)
T ss_pred             CCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence            666899999999999999999999999999999887 556655555555555544433

>PTZ00207 hypothetical protein; Provisional

Probab=99.76  E-value=2.1e-15  Score=170.43  Aligned_cols=442  Identities=10%  Similarity=-0.008  Sum_probs=243.4

Q ss_pred             HHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc------hhhHHH
Q psy17194        294 PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS------TSYQML  367 (871)
Q Consensus       294 ~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l  367 (871)
                      +.+...+++++|++..+.+++.+.. .......++.|++.||+|+|+++  .++.++.+++.++++++      .+.+.+
T Consensus        47 sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vl--lig~ll~~iG~ll~ala~~~~i~~s~~~l  123 (591)
T PTZ00207         47 NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIF--VLSMTVFCLGTLLFALTFQEVIEGSVVRL  123 (591)
T ss_pred             HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHH--HHHHHHHHHHHHHHHHHhcccccCcHHHH
Confidence            3444557888999999999988763 34445677889999999999965  77888888888887775      578888


Q ss_pred             HHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHH
Q psy17194        368 MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYA  447 (871)
Q Consensus       368 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~  447 (871)
                      ++.+++.|+|.+...+.....   ..+.+ +++||++.|+......+|+++.+.+...+.. .+|++.|++.+++.++..
T Consensus       124 ~l~r~l~G~G~~~~~~~~~~~---i~~~F-p~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~  198 (591)
T PTZ00207        124 SVYNGLMTLGCMLFDLGAVVT---VLSVF-PSNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVG  198 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---HHHhC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHH
Confidence            888999999887764433333   33433 5789999999999999999875555554444 468888888888777766


Q ss_pred             HHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchh-h
Q psy17194        448 PVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPF-K  526 (871)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  526 (871)
                      ++.+...+.........++  .+.+.++            . ........++.+++              ++  ...+ .
T Consensus       199 ll~~~~vr~p~~~~~~~~~--~~~~~~~------------~-~~~~~~~~~y~~q~--------------~p--~~~f~~  247 (591)
T PTZ00207        199 ILAIVFMRLPPFHLTGYQE--KHLDEEE------------K-AQRLMRKGVYLKQK--------------AP--MWRFVY  247 (591)
T ss_pred             HHHHhheeCCcchhhcccc--cCCCHHH------------H-HHHhhhhhhhhhcC--------------CC--ceehhh
Confidence            5555443322110000000  0000000            0 00000000000000              00  0001 1


Q ss_pred             hccccccCccccchhHHHHhhcCC-chhHHHHHHHHHHHHHHHH-Hhccc-----c-hh-h-----hc---------cCC
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGK-EIPFLILAFVSLLDGFMLL-LVMKP-----V-KE-Q-----LN---------QKK  583 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~-~~~~~~~~~~~~~~~~~~~-~~~~~-----~-~~-~-----~~---------~~~  583 (871)
                      ...+.+...+--++-..+...... +.....++++.++.+++.. ..++.     . .+ +     .+         +.+
T Consensus       248 ~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (591)
T PTZ00207        248 GFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAE  327 (591)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccc
Confidence            111111111111122222222222 2222333332221111111 11100     0 00 0     00         000


Q ss_pred             C------CC---C-cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccc--hhhhhhccchhhhhh
Q psy17194        584 P------ES---H-STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK--IGMIWLPAFFPHVFG  651 (871)
Q Consensus       584 ~------~~---~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~--~gl~~~~~~~~~~i~  651 (871)
                      .      .+   + ....+++.++...+|+..+..++....-..+...+....+..-|.+...  ..++.+..++++.+|
T Consensus       328 ~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~G  407 (591)
T PTZ00207        328 DKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVG  407 (591)
T ss_pred             cccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhh
Confidence            0      00   0 0115677888999999999888888777777777887775432663332  333778889999999


Q ss_pred             hhhhhhhh----hccCchh---hHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccc
Q psy17194        652 VVITVKLA----KLYPTYQ---WLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYV  724 (871)
Q Consensus       652 ~~~~g~l~----d~~~~~~---~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  724 (871)
                      .+..|.+.    +|..++|   ...+.+..+ +.++.+++....+...+.++.++.|++.|...+...++..++..    
T Consensus       408 Rl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg----  482 (591)
T PTZ00207        408 RLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA----  482 (591)
T ss_pred             HHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc----
Confidence            99998876    2222211   122333333 33443443333222356677777788888776666666665554    


Q ss_pred             cccchHHhHHHHHHHHHHhHh-hhhHHHhHhhhC-------------hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        725 SVYGSIYAIADISYSLAYAIG-PIVAGGIVDAIG-------------FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       725 ~~~g~a~g~~~~~~~~g~~~g-p~~~g~l~~~~g-------------~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      ++.|+-+-+..+..-+|+.+- -.+.|.++|+-+             ++..|.+++++++.+.+....+
T Consensus       483 k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l  551 (591)
T PTZ00207        483 KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV  551 (591)
T ss_pred             cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence            334554444444444454443 456677777521             7788999999988888665544

>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter

Probab=99.76  E-value=3.1e-15  Score=165.76  Aligned_cols=391  Identities=8%  Similarity=0.053  Sum_probs=241.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh----hcCchhHHHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK----LYPTYQWLMVAVGLV  349 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~~~~~  349 (871)
                      ++..+....+-.++++....++.+.|++ .+|.+....+++.....+...+.+++.|+++|    |+||||.++ ..+..
T Consensus         5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~i-l~g~~   82 (477)
T TIGR01301         5 KLLRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFI-AAGAA   82 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHH-HHHHH
Confidence            3444555566667777888888888775 58999999999999999999999999999999    599999763 33455


Q ss_pred             HHHHHHHHhhcchhhH-----------------HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccch--hhHHHHHHH
Q psy17194        350 LEGLCCFIIPFSTSYQ-----------------MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVY--GSIYAIADI  410 (871)
Q Consensus       350 ~~~~~~~~~~~~~~~~-----------------~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~r--g~a~gi~~~  410 (871)
                      ...+++++++++.+..                 ..++...+..++.....+   +.-+.+.|..|+++|  +.++++.+.
T Consensus        83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~---p~rALiaDl~p~~~~~~~~a~~~~~~  159 (477)
T TIGR01301        83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG---PCRAFLADLTGGDARRTRIANAYFSF  159 (477)
T ss_pred             HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH---HHHHhcccccCchhHHHHHHHHHHHH
Confidence            5555666666554432                 112222233334444433   334445555555644  689999999


Q ss_pred             HHHHHHHHHHHHHHHH--Hhhh-------------ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcc
Q psy17194        411 SYSLAYAIGPIVAGGI--VDAI-------------GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPK  475 (871)
Q Consensus       411 ~~~lg~~igp~l~g~l--~~~~-------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (871)
                      ..++|..+|+.+++..  .+.+             +.+..|++.+++.++...+..+..+++....  +++         
T Consensus       160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~---------  228 (477)
T TIGR01301       160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDD---------  228 (477)
T ss_pred             HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--ccc---------
Confidence            9999999999999875  3322             4678888877766666555443322111000  000         


Q ss_pred             cccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHH
Q psy17194        476 KEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFL  555 (871)
Q Consensus       476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~  555 (871)
                        .++   ++.++.+   +.  +                      ..+.+                              
T Consensus       229 --~~~---~~~~~~~---~~--~----------------------~~~~~------------------------------  246 (477)
T TIGR01301       229 --FIN---SEAAPPS---KH--G----------------------EEAFF------------------------------  246 (477)
T ss_pred             --chh---hhccccc---cc--c----------------------hhhhH------------------------------
Confidence              000   0000000   00  0                      00000                              


Q ss_pred             HHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhh-hcc-chhHHHHHHHHHHHHHHHHHhhhcHHHHHH-HhcCC
Q psy17194        556 ILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWK-LFM-DPYIAVCSGALLMANVALAFLEPTISLWIE-DNLTT  632 (871)
Q Consensus       556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~-~~~g~  632 (871)
                                                        ..+.+ +.+ -|.++..+++.++.+++++.+..+...|.. +.|+-
T Consensus       247 ----------------------------------~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~  292 (477)
T TIGR01301       247 ----------------------------------GELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGG  292 (477)
T ss_pred             ----------------------------------HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCC
Confidence                                              00111 111 145667788999999999988888888875 56765


Q ss_pred             Cccch---------h-hhhhccchhhhhhhhhhhhhhhccCc-hhhHHHHHHHHHHhhHHhhhcchhh------------
Q psy17194        633 DNWKI---------G-MIWLPAFFPHVFGVVITVKLAKLYPT-YQWLMVAVGLVLEGLCCFIIPFSTS------------  689 (871)
Q Consensus       633 s~~~~---------g-l~~~~~~~~~~i~~~~~g~l~d~~~~-~~~~~~~~g~~~~~~~l~~~~~~~~------------  689 (871)
                      ++.+.         | +.....++...+.+++..++.+|+|+ |+  .-.++.++.++++....+.++            
T Consensus       293 ~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~--~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~  370 (477)
T TIGR01301       293 SVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR--LWGIVNIILAICLAATVLVTYVAKNSRYYDGDG  370 (477)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh--HHHHHHHHHHHHHHHHHHHHhhhhccccccccc
Confidence            44211         2 22344455555666777888999985 45  435676677777665543221            


Q ss_pred             ---------hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC--h
Q psy17194        690 ---------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--F  758 (871)
Q Consensus       690 ---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g--~  758 (871)
                               .+..++.+.++|+..+.....-.++++...+.. .+..|..+|+.|++-.+.+.+.....|.+.+.+|  .
T Consensus       371 ~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~-~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~  449 (477)
T TIGR01301       371 ESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL-GAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGN  449 (477)
T ss_pred             cccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence                     244555666667766655444444555555422 3567999999999999999999998888776665  5


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q psy17194        759 TALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       759 ~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      .+++.+.++.+++++...+++
T Consensus       450 ~~~~~~~gv~~~~aa~~~~~~  470 (477)
T TIGR01301       450 LPAFVVGAVAAFVSGLLALIL  470 (477)
T ss_pred             eeHHHHHHHHHHHHHHHHHHh
Confidence            566777777777776555443

This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.

>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.2e-15  Score=164.90  Aligned_cols=357  Identities=12%  Similarity=0.145  Sum_probs=255.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh----cCchhHHHHHHHHHHHHHHHH
Q psy17194        281 ALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL----YPTYQWLMVAVGLVLEGLCCF  356 (871)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~~~~~~~~  356 (871)
                      .-+..+........++..|+.+..|+++..+|.++.+.-+.-++.-++.|.++||    +||+|.++ ..+.+..++...
T Consensus        20 gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~l-L~g~ip~~i~~~   98 (467)
T COG2211          20 GDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWL-LWGAIPFAIVAV   98 (467)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHH-HHHhHHHHHHHH
Confidence            3344455666777888889999999999999999998888899999999999996    57777654 445455555555


Q ss_pred             Hhhcch------hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy17194        357 IIPFST------SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI  430 (871)
Q Consensus       357 ~~~~~~------~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~  430 (871)
                      ++..++      +....++...+.+++.........++...+.+.  +++|.+..+.-.....+|..+...+.+.+....
T Consensus        99 l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d--~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~  176 (467)
T COG2211          99 LLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQD--PQERASLTSWRMVFASLGGLLVAVLFPPLVKLF  176 (467)
T ss_pred             HHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            554443      233445556777888888766666776666665  489999999999999999888888887777654


Q ss_pred             -------ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        431 -------GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       431 -------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                             ||+....+.+++.++.....++..++|..+              ..           +.++            
T Consensus       177 g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~--------------~~-----------~~~~------------  219 (467)
T COG2211         177 GGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVE--------------TQ-----------PTKT------------  219 (467)
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc--------------cc-----------cCcc------------
Confidence                   355555555544444443333322211100              00           0000            


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                     +
T Consensus       220 -------------------------------------------------------------------------------~  220 (467)
T COG2211         220 -------------------------------------------------------------------------------G  220 (467)
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccC
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  663 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~  663 (871)
                      ...+.+..+..+++||++...++..++.+.+.......+..|.+...|.+....++.+.....+.+++.++..++.+|+|
T Consensus       221 ~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~g  300 (467)
T COG2211         221 VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFG  300 (467)
T ss_pred             ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence            00000112356889999999988888888887777777788888889999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHhhHHhhhcc--hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhc----cccccchHHhHHHHH
Q psy17194        664 TYQWLMVAVGLVLEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR----YVSVYGSIYAIADIS  737 (871)
Q Consensus       664 ~~~~~~~~~g~~~~~~~l~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~g~a~g~~~~~  737 (871)
                      +|+.  ...+.++..++.+.+-+  .++...+++..++.++|.+...+..+++..+.+|.-    ..++.|...|.++++
T Consensus       301 kk~~--~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~  378 (467)
T COG2211         301 KKKL--FLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF  378 (467)
T ss_pred             hHHH--HHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence            9884  44555555555544433  345566677778888888888888888888888754    366789999999999


Q ss_pred             HHHHHhHhhhhHHHhHhhhCh
Q psy17194        738 YSLAYAIGPIVAGGIVDAIGF  758 (871)
Q Consensus       738 ~~~g~~~gp~~~g~l~~~~g~  758 (871)
                      +-+|.+++..+.|++.+..||
T Consensus       379 ~K~g~ala~~~~g~~L~~~Gy  399 (467)
T COG2211         379 RKLGLALAGFIPGWILGAIGY  399 (467)
T ss_pred             HHHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999887664

>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions

Probab=99.75  E-value=2.9e-15  Score=167.30  Aligned_cols=350  Identities=10%  Similarity=-0.011  Sum_probs=231.1

Q ss_pred             HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHH-HHHHHHHHHHHHhhhhhhhhhhh
Q psy17194        311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQM-LMLPICGICFGMALVDTALLPTL  389 (871)
Q Consensus       311 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~l~g~g~~~~~~~~~~~~  389 (871)
                      .++..++..+...+..++.|-++|+-++||.++....+........+....++.+. ..+..++..+++........+.+
T Consensus        72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L  151 (477)
T PF11700_consen   72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL  151 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            35566777788888889999999999988876554444443333333333343333 23333334455555544555556


Q ss_pred             hhhhccccccch--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHhhh--------ChhhH
Q psy17194        390 GYLVDVRYVSVY--------------------------GSIYAIADISYSLAYAIGPIVAGGIVDAI--------GFTAL  435 (871)
Q Consensus       390 ~~~~~~~~~~~r--------------------------g~a~gi~~~~~~lg~~igp~l~g~l~~~~--------g~~~~  435 (871)
                      .++++.   +.+                          ++..+.-...+++|+.+.-.+.-.+....        ..|..
T Consensus       152 P~la~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~  228 (477)
T PF11700_consen  152 PDLARP---EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA  228 (477)
T ss_pred             HhhcCC---ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence            565554   333                          88888888888888888776655543322        24666


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccc
Q psy17194        436 NFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAAN  515 (871)
Q Consensus       436 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  515 (871)
                      +.+.++..++..+-.++..+.+++.+.                       .++...    ..                  
T Consensus       229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~-----------------------~~~~~~----~~------------------  263 (477)
T PF11700_consen  229 FLIVALWWLVFSIPLFLWLPDRPGPRP-----------------------LPSGSS----YL------------------  263 (477)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCCCCC-----------------------CCcchh----HH------------------
Confidence            666665544433333322221111000                       000000    00                  


Q ss_pred             cCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhh
Q psy17194        516 VGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKL  595 (871)
Q Consensus       516 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  595 (871)
                                                     ..+|+                                   +-...++++
T Consensus       264 -------------------------------~~g~~-----------------------------------~l~~t~k~~  277 (477)
T PF11700_consen  264 -------------------------------RFGFK-----------------------------------RLWRTFKEI  277 (477)
T ss_pred             -------------------------------HHHHH-----------------------------------HHHHHHHHH
Confidence                                           00000                                   001124667


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCch--hhHHHHHH
Q psy17194        596 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY--QWLMVAVG  673 (871)
Q Consensus       596 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~--~~~~~~~g  673 (871)
                      .|+|+....+++.++..-++..+......|.++++|++..+...+.+...+..++|+++.|++.||+|.|  +.  +.++
T Consensus       278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~--l~~~  355 (477)
T PF11700_consen  278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT--LLIS  355 (477)
T ss_pred             HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH--HHHH
Confidence            7889999999999999999999999999999999999999999999999999999999999999999998  53  3333


Q ss_pred             HHHH-hhHHhh-hcc------hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHh
Q psy17194        674 LVLE-GLCCFI-IPF------STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  745 (871)
Q Consensus       674 ~~~~-~~~l~~-~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~g  745 (871)
                      +.+. .+++.. +++      ..+.+.+.+.-+..|+..|...+..=++...+++   +++.+.-.|++++.....+.+|
T Consensus       356 l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP---~g~e~efFgly~i~gk~ss~lG  432 (477)
T PF11700_consen  356 LILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIP---PGREAEFFGLYAITGKASSWLG  432 (477)
T ss_pred             HHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCC---CchhhHHHHHHHHHHHHHHHHH
Confidence            3332 122221 110      2344556666667888888877766667776666   8899999999999999999999


Q ss_pred             hhhHHHhHhhhC-hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        746 PIVAGGIVDAIG-FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       746 p~~~g~l~~~~g-~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      |.+.|.+.+.+| .+..+....++.+++.++.+.+
T Consensus       433 Pll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v  467 (477)
T PF11700_consen  433 PLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV  467 (477)
T ss_pred             HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence            999999999998 7788887777777777665544

Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.74  E-value=1.9e-15  Score=161.40  Aligned_cols=385  Identities=17%  Similarity=0.179  Sum_probs=258.9

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      .+.+..++...+-..+.++.+-.++-.|+.. ++                       |.++.+.++..-+++.|.-.--+
T Consensus        20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~-----------------------~gLg~~~~~A~~l~~~y~slVY~   76 (498)
T COG3104          20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLG-----------------------DGLGFDETHATGLFSAYGSLVYL   76 (498)
T ss_pred             CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcc-----------------------ccCCcChHhhHHHHHHHHHHHHH
Confidence            3456677777888888877776666666543 22                       12567888888888888777777


Q ss_pred             hhhhhhHhhhhh-CCchHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChh-hHHHH
Q psy17194        121 VNPFSGALIDRI-GYDLPMMIGLCIMFLSTALFACGR--SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEEN-ERSQA  196 (871)
Q Consensus       121 ~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~--s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~-~r~~~  196 (871)
                      ...++|+++||+ |+|+.+++|.++.++|.+..+.+.  +...++++-++.++|.|.+-+...++++|.+++++ +|-..
T Consensus        77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~g  156 (498)
T COG3104          77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGG  156 (498)
T ss_pred             HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCC
Confidence            889999999995 999999999999999999999884  78899999999999999999999999999996533 46778


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhh---ccCCCCCCccc---------
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQL---NQKKPESHSTV---------  264 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~---~~~~~~~~~~~---------  264 (871)
                      +++++.+.++|.+++|++.+++.+.+||+..|.+.++-..+..+..++..+......   +....+.....         
T Consensus       157 Ft~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (498)
T COG3104         157 FTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVM  236 (498)
T ss_pred             ccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHH
Confidence            999999999999999999999999999999999988877766555554443211110   00000000000         


Q ss_pred             -----------------------------chhhhhc------c-hhHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q psy17194        265 -----------------------------PIWKLFM------D-PYIA---VCSGALLMANVALAFLEPTISLWIEDNLT  305 (871)
Q Consensus       265 -----------------------------~~~~~~~------~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g  305 (871)
                                                   -..+.++      + ++.+   .+.+...+....+....+.+..|..+.-+
T Consensus       237 ~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~  316 (498)
T COG3104         237 ILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVN  316 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhc
Confidence                                         0000111      1 1121   12222222233333334445555444322


Q ss_pred             CC----chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchh-----HHHHHHHHHHHHHHHHHhhcc----------hhhHH
Q psy17194        306 TD----NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQ-----WLMVAVGLVLEGLCCFIIPFS----------TSYQM  366 (871)
Q Consensus       306 ~s----~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~-----~~~~~~~~~~~~~~~~~~~~~----------~~~~~  366 (871)
                      .+    +...++..+...+..++..++..++..+.++++     ..-..+++.+++.+.+.+...          .+.++
T Consensus       317 ~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~  396 (498)
T COG3104         317 RQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWW  396 (498)
T ss_pred             ccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHH
Confidence            22    234566777777777778877777777643331     112355666666655554332          25677


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHH------HHhhhChhhHHHHHH
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG------IVDAIGFTALNFLIA  440 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~------l~~~~g~~~~f~~~~  440 (871)
                      ++...+++.+|.-+.++.-.+....++   |+...+.+++.+......|..++..+.+.      ..+.......|+.++
T Consensus       397 lil~y~l~s~gEL~iSpvGLs~~t~la---P~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g  473 (498)
T COG3104         397 LVLSYVLQSFGELFISPVGLSMVTKLA---PPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIG  473 (498)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHH
Confidence            788889999999998776666655554   44888999999888888888887777763      344455677888887


Q ss_pred             HHHHHHHHHHHH
Q psy17194        441 FMNILYAPVLIY  452 (871)
Q Consensus       441 ~~~~~~~~~~~~  452 (871)
                      ...++...+.+.
T Consensus       474 ~v~i~~~~~~~~  485 (498)
T COG3104         474 VVAIVIGILLLL  485 (498)
T ss_pred             HHHHHHHHHHHH
Confidence            777665555443

>KOG2325|consensus

Probab=99.73  E-value=4.8e-16  Score=168.22  Aligned_cols=386  Identities=16%  Similarity=0.185  Sum_probs=251.7

Q ss_pred             ccCcccccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHH
Q psy17194         34 LQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFAS  113 (871)
Q Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~  113 (871)
                      ..+.++.+|+.+.+..+.+++.....+++.+..-+|.++++.                         +.+.+..|++.++
T Consensus        25 ~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~-------------------------~A~~~ffG~viaa   79 (488)
T KOG2325|consen   25 PLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDP-------------------------TATATFFGLVIAA   79 (488)
T ss_pred             cccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCC-------------------------CCCcchhhHHHHH
Confidence            344456678888889999999999999999999999988643                         5589999999999


Q ss_pred             HHHHHHHhhhhhhHhhhhhCC-chHHHHHHHHHHHHHHHH-Hhh---h-hHHHHHHHHHHHHhhhhhhhhhHHHHhhccc
Q psy17194        114 KAIVQLMVNPFSGALIDRIGY-DLPMMIGLCIMFLSTALF-ACG---R-SYGVLFFARSLQGVGSAFADTSGLAMIADRF  187 (871)
Q Consensus       114 ~~l~~~~~~~~~G~l~Dr~Gr-r~~l~~~~~~~~i~~~l~-~~a---~-s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~  187 (871)
                      ..++.++++|..|....|.+. |+.++.+.++..++.++. .+.   + ..+.++++|++.|+|.|..... .+++++.-
T Consensus        80 ~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~l-R~Y~a~~s  158 (488)
T KOG2325|consen   80 SSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVL-RAYIADAS  158 (488)
T ss_pred             HHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHH-HHHHHhcc
Confidence            999999999999999999997 888999999999999998 433   3 6788999999999999876544 89999964


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--C-----------ChhHHHHHHHHHHHHHHHHHHhcccchhhhc
Q psy17194        188 TEENERSQALGIALAFISFGCLVAPPFGGALYQFA--G-----------KEIPFLILAFVSLLDGFMLLLVMKPVKEQLN  254 (871)
Q Consensus       188 ~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~--g-----------wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~  254 (871)
                       ..++|.|+++....+..+|..+||.++..+....  |           +..+-|+.+++.++..++..++.+|......
T Consensus       159 -~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~  237 (488)
T KOG2325|consen  159 -TVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGII  237 (488)
T ss_pred             -CccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCcc
Confidence             4479999999999999999999999887765421  1           4577888899999888888888887654332


Q ss_pred             cCCCCCC-cccchhhhhcc----hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHH----HhhHHhHHH
Q psy17194        255 QKKPESH-STVPIWKLFMD----PY-IAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIW----LPAFFPHVF  324 (871)
Q Consensus       255 ~~~~~~~-~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~----~~~~~~~~~  324 (871)
                      +++.+++ +.....+..++    +. .+.+....+...+......+..+......++++..++-...    +..++..+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~  317 (488)
T KOG2325|consen  238 DKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVI  317 (488)
T ss_pred             ccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHH
Confidence            2211111 01111111222    12 22333333444444445456666666777888776654433    222222222


Q ss_pred             HHHHHHHHH-hhcCchhHHHHHHHHHHHHHHH--HHhhcc--h--------h-------------------hHHHH-HHH
Q psy17194        325 GVVITVKLA-KLYPTYQWLMVAVGLVLEGLCC--FIIPFS--T--------S-------------------YQMLM-LPI  371 (871)
Q Consensus       325 ~~~~~g~l~-dr~g~~~~~~~~~~~~~~~~~~--~~~~~~--~--------~-------------------~~~l~-~~~  371 (871)
                      -.+...... .++.+|+.+  ..+.+......  ..+++.  .        +                   .+.++ ...
T Consensus       318 ~~l~~~f~~l~~i~~r~~~--~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i  395 (488)
T KOG2325|consen  318 LLLLYIFTRLGKIDKRRII--LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFI  395 (488)
T ss_pred             HHHHHHHHHhhhhccceee--eehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehh
Confidence            222222222 222233322  22211111111  111110  0        0                   00011 111


Q ss_pred             HHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHH
Q psy17194        372 CGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       372 ~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      +++|.+.-.+.....+..+++   ..|..++++.+++......+..++|.+...+....|+++.+.+.++..++...++.
T Consensus       396 ~~~g~~~P~~~~~~~tlySki---Lgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~  472 (488)
T KOG2325|consen  396 VVFGIAFPFISTALDTLYSKI---LGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWI  472 (488)
T ss_pred             heeccccccccchHHHHHHHH---hCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHH
Confidence            222333333322233333333   34578899999999999999999999999999999999998887776665554443

>TIGR01272 gluP glucose/galactose transporter

Probab=99.72  E-value=1.5e-15  Score=161.98  Aligned_cols=277  Identities=12%  Similarity=0.091  Sum_probs=192.1

Q ss_pred             chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh-----------
Q psy17194        361 STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA-----------  429 (871)
Q Consensus       361 ~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~-----------  429 (871)
                      ..+++..++..++.+.|.+...+...+.+..+.+.   |++++.+++...+..+|..++|.+++.+...           
T Consensus         7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~---~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~   83 (310)
T TIGR01272         7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPI---ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVAT   83 (310)
T ss_pred             hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc---chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhh
Confidence            35677888888999999999877777776655544   7889999999999999999999999988732           


Q ss_pred             -----hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccccc
Q psy17194        430 -----IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQET  504 (871)
Q Consensus       430 -----~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (871)
                           ..|++.|++.+.+.++..+.+.+.+..+.  +  ++             +.    +...++              
T Consensus        84 ~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~--~--~~-------------~~----~~~~~~--------------  128 (310)
T TIGR01272        84 ANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPEL--Q--EA-------------DV----ARVSSG--------------  128 (310)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC--C--cc-------------cc----cccccc--------------
Confidence                 36888888776665554443333221000  0  00             00    000000              


Q ss_pred             ccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCC
Q psy17194        505 SIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP  584 (871)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  584 (871)
                                                                                                    +.
T Consensus       129 ------------------------------------------------------------------------------~~  130 (310)
T TIGR01272       129 ------------------------------------------------------------------------------DT  130 (310)
T ss_pred             ------------------------------------------------------------------------------cc
Confidence                                                                                          00


Q ss_pred             CCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHh--cCCCccchhhhhhccchhhhhhhhhhhhhhhcc
Q psy17194        585 ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY  662 (871)
Q Consensus       585 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~  662 (871)
                      .     ..++++++|.++...+..++....-.+...+++.|+.+.  +|+++.+.++.++....+.++|+++.+++.||+
T Consensus       131 ~-----~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~  205 (310)
T TIGR01272       131 T-----QKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI  205 (310)
T ss_pred             c-----chhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            0     012356778888877777776667788899999999754  799999999999999999999999999999999


Q ss_pred             CchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHH
Q psy17194        663 PTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAY  742 (871)
Q Consensus       663 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~  742 (871)
                      +++|  .+.++..+..++.+++...+... ......++|++.+..++...+......    +++.++++++. ....+|+
T Consensus       206 g~~~--~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~----~~~~~~asai~-~~~~~Gg  277 (310)
T TIGR01272       206 SQGR--YLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNAL----GRHTSQGSGIL-CLAIVGG  277 (310)
T ss_pred             CHHH--HHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhh----hhhhhhhHHHH-HHHHhcc
Confidence            9888  44555555555444332222222 223445677777777765554444433    34457777775 5677999


Q ss_pred             hHhhhhHHHhHhhhChHHHHHHHH
Q psy17194        743 AIGPIVAGGIVDAIGFTALNFLIA  766 (871)
Q Consensus       743 ~~gp~~~g~l~~~~g~~~~~~~~a  766 (871)
                      +++|.+.|.+.|..|.+.++++..
T Consensus       278 ~i~P~l~G~lad~~g~~~a~~v~~  301 (310)
T TIGR01272       278 AIVPLLQGSLADCLGIQLAFALPV  301 (310)
T ss_pred             hHHHHHHHHHHHhccchHHHHHHH
Confidence            999999999999999988877443

Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.

>KOG0253|consensus

Probab=99.72  E-value=1.1e-15  Score=154.37  Aligned_cols=414  Identities=13%  Similarity=0.082  Sum_probs=233.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL  353 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~  353 (871)
                      ....+.....+.-.......+.+..-+.+..|.+..+..++......+..+++..+|.++|++|||+.+  ........+
T Consensus        78 yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f--~~T~l~t~v  155 (528)
T KOG0253|consen   78 YLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGF--NLTFLVTGV  155 (528)
T ss_pred             hHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhh--hhhHHHHHH
Confidence            333333333343444455566666667888888888999999999999999999999999999999955  566666666


Q ss_pred             HHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh
Q psy17194        354 CCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT  433 (871)
Q Consensus       354 ~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~  433 (871)
                      .-.+-+.++++..+++.+.+.++|.|. .|...+...+..   |..+|+.-+-.. +...+|.+....+.=.+..++|||
T Consensus       156 ~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~l---p~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr  230 (528)
T KOG0253|consen  156 FGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFL---PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWR  230 (528)
T ss_pred             HHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhc---cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHH
Confidence            667778889999999999999999887 344444443333   446666655555 778888888888888888999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcc-cccccccccccccccccccccccccCCCcCc
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTY-TMQDRQPVANDYKNHLEYSMQETSIDENKQP  512 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  512 (871)
                      |.+...+....+.+....+.++..+-...+.+..+..+..++-...+. +....... ...++  +.++++.+.|+....
T Consensus       231 ~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~-~s~~~--~~e~e~~~~~~~~~~  307 (528)
T KOG0253|consen  231 YLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLE-SSAID--RQEQEESDLDDSKSS  307 (528)
T ss_pred             HHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceee-eehhh--hhhhhhhchhhhhhc
Confidence            998888866666666666655533221111000000000000000000 00000000 00000  000000000000000


Q ss_pred             ccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch
Q psy17194        513 AANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI  592 (871)
Q Consensus       513 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  592 (871)
                      +..+ ..+                                                                      ..
T Consensus       308 a~ke-~rg----------------------------------------------------------------------~~  316 (528)
T KOG0253|consen  308 AAKE-VRG----------------------------------------------------------------------GT  316 (528)
T ss_pred             cccc-ccc----------------------------------------------------------------------ch
Confidence            0000 000                                                                      00


Q ss_pred             hhhc----cchhHHHHHHHHHHHHHHHHHhhhc-----------------HHHHHHHhc--CCCccchhhhhhccchhhh
Q psy17194        593 WKLF----MDPYIAVCSGALLMANVALAFLEPT-----------------ISLWIEDNL--TTDNWKIGMIWLPAFFPHV  649 (871)
Q Consensus       593 ~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~-----------------lp~~l~~~~--g~s~~~~gl~~~~~~~~~~  649 (871)
                      ..++    |...+. .....+...+.+|+....                 .|.+++...  .++..+.=.=.+...+..+
T Consensus       317 ~nLlsp~lrkttll-lw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaef  395 (528)
T KOG0253|consen  317 TNLLSPKLRKTTLL-LWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEF  395 (528)
T ss_pred             HhhcChHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhC
Confidence            1111    111111 111112222233332222                 233332211  1111111111345566777


Q ss_pred             hhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchh--hhHHHH--HHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q psy17194        650 FGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST--SYQMLM--LPICGICFGMALVDTALLPTLGYLVDVRYVS  725 (871)
Q Consensus       650 i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  725 (871)
                      -|.++.+++.||+|||+  .++..++++++.++.+..+.  +....+  .+-+....       .......|.-+.||..
T Consensus       396 PGlLIt~~iverlGRKk--TMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg-------~fqvaYvYtPEVyPTa  466 (528)
T KOG0253|consen  396 PGLLITGVIVERLGRKK--TMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISG-------AFQVAYVYTPEVYPTA  466 (528)
T ss_pred             CchhHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhc-------hheEEEEecCcccchh
Confidence            78999999999999999  77888888888877765432  222211  22222211       2223467778888889


Q ss_pred             ccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        726 VYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       726 ~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      .|+++.|..+.+..+|+.+.|.++  +.....-.....+.+++++++.++..++.
T Consensus       467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffP  519 (528)
T KOG0253|consen  467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFP  519 (528)
T ss_pred             hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeee
Confidence            999999999999999999999998  44444444455566666666665555554

>KOG0569|consensus

Probab=99.72  E-value=1.1e-14  Score=159.15  Aligned_cols=378  Identities=12%  Similarity=0.083  Sum_probs=222.5

Q ss_pred             HHHhhC--CCchhH----HHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH-HHHHhhcchhhHHHHHHHH
Q psy17194        300 IEDNLT--TDNWKI----GMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL-CCFIIPFSTSYQMLMLPIC  372 (871)
Q Consensus       300 l~~~~g--~s~~~~----g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~  372 (871)
                      +.+.+|  .+..+.    +.+.+++.++.++|.++.++++||+|||..+.+...+...+. ........++...++++++
T Consensus        45 ~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~  124 (485)
T KOG0569|consen   45 LIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRL  124 (485)
T ss_pred             HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            344556  344433    445677889999999999999999999975533333322222 2223334577888999999


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHH-HHHh-hhChhhHHHHHHHHHHHHHHHH
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG-GIVD-AIGFTALNFLIAFMNILYAPVL  450 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g-~l~~-~~g~~~~f~~~~~~~~~~~~~~  450 (871)
                      +.|+..+.....   ...++.+..|.+.||....+......+|..++..++- .+.. ...|.+.+....+.+++.++..
T Consensus       125 i~Gl~~gl~~~~---~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l  201 (485)
T KOG0569|consen  125 IVGLACGLSTGL---VPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL  201 (485)
T ss_pred             HHHHHhHHHHHH---HHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH
Confidence            999999987433   3344566667799999999999888888888865543 2332 2348888888888777777777


Q ss_pred             HHHhhcccCCCC----chhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhh
Q psy17194        451 IYLKNIYDFKPF----ENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK  526 (871)
Q Consensus       451 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (871)
                      .+.++..+.--.    +++.++..+.     ++..++++.   +.  ++ ...+.++                       
T Consensus       202 ~~~PESPk~Ll~~k~~~~~A~~sl~~-----y~G~~~~~~---~~--e~-~~~e~~~-----------------------  247 (485)
T KOG0569|consen  202 PFLPESPKYLLIKKGDEEEARKALKF-----YRGKEDVEA---EI--EE-MLREIEE-----------------------  247 (485)
T ss_pred             hcCCCCcchHHHHcCCHHHHHHHHHH-----HhCCCcchh---HH--HH-HHHHHHH-----------------------
Confidence            777765443211    1111110000     000000000   00  00 0000000                       


Q ss_pred             hccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHH
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                                                                             .+..+++..++++++++|.......
T Consensus       248 -------------------------------------------------------~~~~~~~~~sl~~~~~~~~lR~~~~  272 (485)
T KOG0569|consen  248 -------------------------------------------------------EELEKKKQISLRQLLKNPTLRRPLL  272 (485)
T ss_pred             -------------------------------------------------------hccccccCCcHHHHhcCcchhHHHH
Confidence                                                                   0000011224577777766654432


Q ss_pred             HHHHHH-----HHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHH
Q psy17194        607 ALLMAN-----VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  681 (871)
Q Consensus       607 ~~~~~~-----~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l  681 (871)
                      ......     .+......+--.++ +.-|++..++-++....++..++.++++.++.||.|||.+  ..+++.+..+..
T Consensus       273 i~~~v~~~qq~sGi~ai~~Yst~i~-~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL--ll~~~~~~~~~~  349 (485)
T KOG0569|consen  273 IGIVVSFAQQFSGINAIFFYSTSIF-KTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL--LLISLSLMAVAL  349 (485)
T ss_pred             HHHHHHHHHHhcCcceeHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH--HHHHHHHHHHHH
Confidence            222222     22222222222334 4559999999999999999999999999999999998874  444544444444


Q ss_pred             hhhcc----hhh--hHH---HHHHHHHH--hhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        682 FIIPF----STS--YQM---LMLPICGI--CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       682 ~~~~~----~~~--~~~---~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      +.+..    ...  .|.   .+.+.+++  +++.|.- +.-.-+.+++++   ++.|..|+++..++..+...+-....-
T Consensus       350 ~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~---~~~R~aa~s~~~~~~w~~~fiv~~~fp  425 (485)
T KOG0569|consen  350 LLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFP---QSARSAAQSVATAVNWLSNFIVGFAFP  425 (485)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCC---ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43321    111  111   12222222  2222221 222335566666   788899999999988888888887777


Q ss_pred             HhHhhhChHHHHHHHHHHHHHHHHHHH
Q psy17194        751 GIVDAIGFTALNFLIAFMNILYAPVLI  777 (871)
Q Consensus       751 ~l~~~~g~~~~~~~~a~~~~~~~~~~~  777 (871)
                      .+.+..|- ..|.+..+.+++..++.+
T Consensus       426 ~l~~~~g~-~~filF~i~~~~~~i~~~  451 (485)
T KOG0569|consen  426 PLQNVIGP-YVFILFVIPLAIFLIYLY  451 (485)
T ss_pred             HHHHHhcc-hhhHHHHHHHHHHHHHHH
Confidence            78888886 566666666666555443

>KOG2563|consensus

Probab=99.71  E-value=7.9e-16  Score=161.10  Aligned_cols=351  Identities=13%  Similarity=0.082  Sum_probs=237.2

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh------hhHH--HHHHHHHHHHhhhhh
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG------RSYG--VLFFARSLQGVGSAF  174 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a------~s~~--~l~~~r~l~G~~~g~  174 (871)
                      +....-|+.-+|++.+....+++-|+.|++|-|..++++..+.++|..+-..+      +.++  ....+..+.+.+.-+
T Consensus        77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~F  156 (480)
T KOG2563|consen   77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPF  156 (480)
T ss_pred             chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhH
Confidence            55677799999999999999999999999999999999999999999887665      3445  667788888888887


Q ss_pred             hhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh------CChh--HHHHHHHHHHHHHHHHHHhc
Q psy17194        175 ADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA------GKEI--PFLILAFVSLLDGFMLLLVM  246 (871)
Q Consensus       175 ~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~------gwr~--~f~~~~~~~l~~~i~~~~~~  246 (871)
                      +...-.-+..-|| ++++|..+..+-..++.+|.++|-++...+..+-      .|..  .|+....+..+..++..+..
T Consensus       157 im~lPskiA~~WF-~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~  235 (480)
T KOG2563|consen  157 ILGLPSKIAAVWF-PPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVF  235 (480)
T ss_pred             hhccccHHHHhhC-CcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            7777556666776 5689999999999999999999998888876543      3544  45555555555455555555


Q ss_pred             ccchhhhccC----CCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhH
Q psy17194        247 KPVKEQLNQK----KPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPH  322 (871)
Q Consensus       247 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~  322 (871)
                      ++.|+.+...    ..+..-....++.++|+++.++.+.+......+......+...+.. -|.+...+|++.....+++
T Consensus       236 ~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~G  314 (480)
T KOG2563|consen  236 TKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAG  314 (480)
T ss_pred             CCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHH
Confidence            5533222111    1112234567788999999888777766555555555444433322 3566678899988889999


Q ss_pred             HHHHHHHHHHHhhcCchhHHHHHHHHHHHHHH-HHHhhcc---hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhh-hcccc
Q psy17194        323 VFGVVITVKLAKLYPTYQWLMVAVGLVLEGLC-CFIIPFS---TSYQMLMLPICGICFGMALVDTALLPTLGYL-VDVRY  397 (871)
Q Consensus       323 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~-~~~~~  397 (871)
                      +++.++.|.+.||.+.-+..+.. ......++ +.+....   ...+.++....++|++....    .|.-.++ ++..+
T Consensus       315 mlga~~~gii~Dktk~fk~~~~v-~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~----~Pig~ElgvE~Ty  389 (480)
T KOG2563|consen  315 MLGALASGIIADKTKKFKLTTLV-LYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGY----LPIGFELGVETTY  389 (480)
T ss_pred             HHHHHHHHhhhhhhhhHHHHHHH-HHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCC----CCcceeeeeeecc
Confidence            99999999999998766643222 22222222 2211111   12222333333444443332    3443333 44456


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC----hhhHHHHHHHHHHHHHHHHHHHhhcccCC
Q psy17194        398 VSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG----FTALNFLIAFMNILYAPVLIYLKNIYDFK  460 (871)
Q Consensus       398 ~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~  460 (871)
                      |..-++..|+.+...++-+.+-..+.+...+..+    +...-+......++.+.+..+.++.+++.
T Consensus       390 Pv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~  456 (480)
T KOG2563|consen  390 PVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL  456 (480)
T ss_pred             ccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence            6777888999999999999999999999988877    55455555555566666666666544443

>KOG4686|consensus

Probab=99.69  E-value=3e-16  Score=152.34  Aligned_cols=357  Identities=15%  Similarity=0.119  Sum_probs=227.2

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHHHHh---hcchhhHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQWLMVAVGLVLEGLCCFII---PFSTSYQMLMLPICG  373 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~l  373 (871)
                      .+++.+.+.+..+..++++.+.+..++-.+++|++.||. |.|. -.++... ...++-+++   +..+.+|.+..++++
T Consensus        68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~-gtii~~~-fv~~GqliFa~Ggi~~aFw~M~~GRF~  145 (459)
T KOG4686|consen   68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRL-GTIILCI-FVFLGQLIFAAGGISHAFWTMLAGRFL  145 (459)
T ss_pred             hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhH-HHHHHHH-HHHHHHHHHHhchHHHHHHHHHhhhee
Confidence            344555566667778899999999999999999999985 4433 2222222 222333332   345788999999999


Q ss_pred             HHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChh---hHHHHHHHHHH------
Q psy17194        374 ICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFT---ALNFLIAFMNI------  444 (871)
Q Consensus       374 ~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~---~~f~~~~~~~~------  444 (871)
                      +|+|.-..   ......+.+..+..++.+.++|+......+|+.+--.+.++++|..+--   ......++...      
T Consensus       146 FGIGgESl---AVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc  222 (459)
T KOG4686|consen  146 FGIGGESL---AVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTC  222 (459)
T ss_pred             eccCchhh---hhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence            99886543   2333344455566788999999999999999998888888888875410   01111111111      


Q ss_pred             -HHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcc
Q psy17194        445 -LYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSN  523 (871)
Q Consensus       445 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (871)
                       ...++....-. .+     ++.+...           +.++.  .         .                        
T Consensus       223 ~~slical~lg~-~D-----~rAeril-----------h~e~g--~---------~------------------------  250 (459)
T KOG4686|consen  223 KQSLICALSLGL-SD-----DRAERIL-----------HLEEG--F---------L------------------------  250 (459)
T ss_pred             HHHHHHHHHhhh-hh-----hHHHHHH-----------hhhcC--c---------c------------------------
Confidence             11111110000 00     0000000           00000  0         0                        


Q ss_pred             hhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHH
Q psy17194        524 PFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAV  603 (871)
Q Consensus       524 ~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  603 (871)
                                                                               -++|...+...     -.|++|.
T Consensus       251 ---------------------------------------------------------Ge~pkLtdv~~-----f~ppfw~  268 (459)
T KOG4686|consen  251 ---------------------------------------------------------GEEPKLTDVNT-----FYPPFWV  268 (459)
T ss_pred             ---------------------------------------------------------cCCcccccccc-----cCccHHH
Confidence                                                                     00011111000     1467787


Q ss_pred             HHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhh
Q psy17194        604 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI  683 (871)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~  683 (871)
                      ..+...+.+.+.+-+...-|.++++.+|+|+..+|-+.+.....+.+.+++.|.++||+|++-+|+ ..+.+..-.+-..
T Consensus       269 ~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv-~~a~~~tl~~H~~  347 (459)
T KOG4686|consen  269 LVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWV-ASACILTLLGHSG  347 (459)
T ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhH-HHHHHHHHHHhhh
Confidence            777778888888888888899999999999999999999999999999999999999999865443 3444443333333


Q ss_pred             hcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC---hHH
Q psy17194        684 IPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG---FTA  760 (871)
Q Consensus       684 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g---~~~  760 (871)
                      +.++  .+.-.+.+..+|+...+....++|.+...++   .++-|++.|..+..+++|-++-|+++|.+.|+-|   +-.
T Consensus       348 l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vp---E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le  422 (459)
T KOG4686|consen  348 LFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVP---EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLE  422 (459)
T ss_pred             HHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCC---HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHH
Confidence            3221  1222456777888888887778999998888   7788999999999999999999999999998765   333


Q ss_pred             HHHHHH-HHHHHHHHHHHHH
Q psy17194        761 LNFLIA-FMNILYAPVLIYL  779 (871)
Q Consensus       761 ~~~~~a-~~~~~~~~~~~~~  779 (871)
                      +|.+.. .+++....+.+++
T Consensus       423 ~ffl~~~~~aL~svgil~~~  442 (459)
T KOG4686|consen  423 AFFLIIGLMALTSVGILFYL  442 (459)
T ss_pred             HHHHHHHHHHHHHHHHHhhe
Confidence            444433 3334444433333

>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]

Probab=99.69  E-value=1.7e-14  Score=154.15  Aligned_cols=436  Identities=15%  Similarity=0.079  Sum_probs=273.2

Q ss_pred             hhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhH
Q psy17194        268 KLFMD-PYIAVCSGALLMANVALAFLEPTISLWIEDNLT----TDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQW  341 (871)
Q Consensus       268 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~  341 (871)
                      +.+++ |.++.++..-+.--++++++...+..|+..+++    +++.++.-+.+.+....-...+++||++||+ |+||.
T Consensus        15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~t   94 (498)
T COG3104          15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRT   94 (498)
T ss_pred             ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH
Confidence            44554 456667777788888999999999999998888    9999988888888888888899999999996 88884


Q ss_pred             HHHHHHHHHHHHHHHHhhcch--hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHH
Q psy17194        342 LMVAVGLVLEGLCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  419 (871)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~ig  419 (871)
                      +  ..+.++..++.+.++...  +...+++++.+..+|.|+.-+...+.+.+.-++.+++ |-.+++++.+..++|+.++
T Consensus        95 I--~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~  171 (498)
T COG3104          95 I--VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIA  171 (498)
T ss_pred             H--HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHH
Confidence            4  888888999999888774  6777888888899999999888888887777665444 7788899999999999999


Q ss_pred             HHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccc
Q psy17194        420 PIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEY  499 (871)
Q Consensus       420 p~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  499 (871)
                      |.+.+++.++.||+..|...++-..++++..+..++........++....                      ..+.    
T Consensus       172 p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~----------------------~~~~----  225 (498)
T COG3104         172 PIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPL----------------------SFNF----  225 (498)
T ss_pred             HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccch----------------------hhhh----
Confidence            99999999999999999999988888888777766543322211100000                      0000    


Q ss_pred             cccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhc---CCchhHHHHHHHHHHHHHHHHHhcccch
Q psy17194        500 SMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFA---GKEIPFLILAFVSLLDGFMLLLVMKPVK  576 (871)
Q Consensus       500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~  576 (871)
                                            ..|..      +.+..-.+...+....   .++......++......+...+..++..
T Consensus       226 ----------------------~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  277 (498)
T COG3104         226 ----------------------LLPVL------GGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVF  277 (498)
T ss_pred             ----------------------hhhhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccH
Confidence                                  00000      0000000000001111   1111111111111111111111111000


Q ss_pred             hhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCC----ccchhhhhhccchhhhhhh
Q psy17194        577 EQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTD----NWKIGMIWLPAFFPHVFGV  652 (871)
Q Consensus       577 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s----~~~~gl~~~~~~~~~~i~~  652 (871)
                                ++   -++++.   +....+...+.+..+....+.+..|-++..+-+    ....++.-+...+..++.+
T Consensus       278 ----------~e---r~r~~~---~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~  341 (498)
T COG3104         278 ----------DE---RRRLLA---AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFS  341 (498)
T ss_pred             ----------HH---HHHHHH---HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHH
Confidence                      00   011111   111222233333344455666777765432222    1234555666677777777


Q ss_pred             hhhhhhhhccCch-----hhHHHHHHHHHHhhHHhhhcch----------hhhHHHHHHHHHHhhhhhhcchhhhhhhhh
Q psy17194        653 VITVKLAKLYPTY-----QWLMVAVGLVLEGLCCFIIPFS----------TSYQMLMLPICGICFGMALVDTALLPTLGY  717 (871)
Q Consensus       653 ~~~g~l~d~~~~~-----~~~~~~~g~~~~~~~l~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  717 (871)
                      ++..++-.|.+++     -..-..+|+.+++.+++.+.+.          .+.++.+...++.++|--...+.-....+.
T Consensus       342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~  421 (498)
T COG3104         342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK  421 (498)
T ss_pred             HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            7776776653322     1123456777777776665321          345666778888888887776655555555


Q ss_pred             hhhhccccccchHHhHHHHHHHHHHhHhhhhHHH------hHhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        718 LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG------IVDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       718 ~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~------l~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      ..+   +...+.++|..-.....|..++..+.+.      .++.......|+.++.+.++.....+..
T Consensus       422 laP---~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~  486 (498)
T COG3104         422 LAP---PALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLL  486 (498)
T ss_pred             hCh---HHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Confidence            555   7778888898888888888888777663      4456667888888887777766544433

>KOG0252|consensus

Probab=99.67  E-value=2.1e-15  Score=157.50  Aligned_cols=373  Identities=13%  Similarity=0.056  Sum_probs=219.6

Q ss_pred             CchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch-------hhHHHHHHHHHHHHHHh
Q psy17194        307 DNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST-------SYQMLMLPICGICFGMA  379 (871)
Q Consensus       307 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~l~g~g~~  379 (871)
                      ++...+.+..+..++.++|+++.|++.||+|||+++  ...++++.++.+.+++..       -.+++...+++.|+|.|
T Consensus        82 ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vY--G~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG  159 (538)
T KOG0252|consen   82 PSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVY--GKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG  159 (538)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhh--hHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence            345567788888999999999999999999999965  777777777776665442       13567888999999999


Q ss_pred             hhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH----hhhC-----------hhhHHHHHHHHHH
Q psy17194        380 LVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV----DAIG-----------FTALNFLIAFMNI  444 (871)
Q Consensus       380 ~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~----~~~g-----------~~~~f~~~~~~~~  444 (871)
                      .-+|......++....   +.||.-.+...+....|...|.++.-.+.    ..++           ||..+.+.++..+
T Consensus       160 GDYPlSAtI~SE~an~---~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~  236 (538)
T KOG0252|consen  160 GDYPLSATIMSESANK---KTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPAL  236 (538)
T ss_pred             CCCcchHHHhhhhhhh---ccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            9977777776666555   77888777765555555544444443332    2121           5554443333222


Q ss_pred             HHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcch
Q psy17194        445 LYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNP  524 (871)
Q Consensus       445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (871)
                      +   ++++-.+.+..++.+  .... ++... ..     ++.++     ..+.+.++++..          ..+...+++
T Consensus       237 ~---~ly~Rl~M~Et~~Y~--al~~-~~~~~-a~-----~d~~k-----~~~~~~~~~~~~----------~~~~~~~~~  289 (538)
T KOG0252|consen  237 L---VLYFRLKMPETARYT--ALVS-KKLKQ-AA-----GDMKK-----VLSVDIEAESTA----------ESDVPPPSN  289 (538)
T ss_pred             H---HHHhhhcCCcchhHH--HHhh-cCHhh-hh-----hcccc-----ccccccchhhcc----------ccCCCCccc
Confidence            2   121111111111100  0000 00000 00     00000     000000000000          000000000


Q ss_pred             hhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhc---cchhH
Q psy17194        525 FKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLF---MDPYI  601 (871)
Q Consensus       525 ~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~  601 (871)
                                                                                     ....+.+++   .-+..
T Consensus       290 ---------------------------------------------------------------~~~~F~~~f~~~hg~~L  306 (538)
T KOG0252|consen  290 ---------------------------------------------------------------SFGLFSRLFLRWHGKHL  306 (538)
T ss_pred             ---------------------------------------------------------------ccchHHHHHHHHHHHHH
Confidence                                                                           000011122   22455


Q ss_pred             HHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhh--------hhhcc-chhhhhhhhhhhhhhhccCchhhHHHHH
Q psy17194        602 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGM--------IWLPA-FFPHVFGVVITVKLAKLYPTYQWLMVAV  672 (871)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl--------~~~~~-~~~~~i~~~~~g~l~d~~~~~~~~~~~~  672 (871)
                      +..+...++.-.++|......+..++ ..|+.+.+.-+        .-... ..+.+.|..+...+.|++||+.  +...
T Consensus       307 lgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~--iq~~  383 (538)
T KOG0252|consen  307 LGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY--IQLM  383 (538)
T ss_pred             HHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH--HHHh
Confidence            66677788888899988888888884 45776665544        12222 3334446677788899999877  7778


Q ss_pred             HHHHHhhHHhhhcchhh----hHHH-HHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhh
Q psy17194        673 GLVLEGLCCFIIPFSTS----YQML-MLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPI  747 (871)
Q Consensus       673 g~~~~~~~l~~~~~~~~----~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~  747 (871)
                      |+++..+..+.++..-+    .... +...+...++...   |..+......+..|.+.||+..|+......+|+.+|..
T Consensus       384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~  460 (538)
T KOG0252|consen  384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF  460 (538)
T ss_pred             hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence            88888887777654222    1112 2222222232222   33333444445566889999999999999999999999


Q ss_pred             hHHHhHh-----hhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        748 VAGGIVD-----AIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       748 ~~g~l~~-----~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      ..+.+.+     ..|.++++++.+++.+++.+..+++.
T Consensus       461 ~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p  498 (538)
T KOG0252|consen  461 GFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP  498 (538)
T ss_pred             HhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence            9999999     88999999999999999887766654

>KOG2816|consensus

Probab=99.65  E-value=3.3e-14  Score=156.77  Aligned_cols=306  Identities=19%  Similarity=0.270  Sum_probs=224.9

Q ss_pred             HHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhh--hhhhhhhHHHHhhcccCCh
Q psy17194        113 SKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVG--SAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       113 ~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~--~g~~~~~~~a~i~~~~~~~  190 (871)
                      ...+...+.++..|.++||||||..+....+...+..+...+..  |++++   +.|+.  .+.......++++|.. .+
T Consensus        70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis-~~  143 (463)
T KOG2816|consen   70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADIS-SE  143 (463)
T ss_pred             hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeecc-ch
Confidence            34677888999999999999999999999998888887777765  33333   44443  2334567789999985 66


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC-C-------CC--
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK-P-------ES--  260 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~-~-------~~--  260 (871)
                      ++|...+|+.+.....+..++|.+++.+.+..|.-.+|++..+..++..+...++.||+..+.+.+. .       +.  
T Consensus       144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~  223 (463)
T KOG2816|consen  144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDS  223 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccc
Confidence            8999999999999999999999999999999999999999999999998888888887654333220 0       00  


Q ss_pred             C----cccchhhhhcchhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHH-HHHh
Q psy17194        261 H----STVPIWKLFMDPYIAVCSGALLMANVALAFLEP-TISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITV-KLAK  334 (871)
Q Consensus       261 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g-~l~d  334 (871)
                      .    ......+.-.+|..+.++...++.......-.. ..+.|++..++++..+.+...+.......+++++.. .+..
T Consensus       224 ~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~  303 (463)
T KOG2816|consen  224 SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSS  303 (463)
T ss_pred             hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0    001111211234444444444443333222111 335667888999999999888888888888887766 7777


Q ss_pred             hcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q psy17194        335 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  414 (871)
Q Consensus       335 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l  414 (871)
                      .+|.++  ++..|+..-.+..+.++++.+.|+.+....+.++..... +..-+..+..++   ++++|+++++......+
T Consensus       304 ~l~~~~--~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~~-pa~~s~~s~~v~---~~e~g~v~~~is~i~~l  377 (463)
T KOG2816|consen  304 ILGEKR--LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIVF-PAIRAFASILVS---PEEQGKVFGIISGIEGL  377 (463)
T ss_pred             HHhhhh--HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcchh-HHHHhHHHhhcc---cccccchhhHHHHHHHH
Confidence            788888  558889889999999999999998777666555554432 444444444444   49999999999999999


Q ss_pred             HHHHHHHHHHHHHhhh
Q psy17194        415 AYAIGPIVAGGIVDAI  430 (871)
Q Consensus       415 g~~igp~l~g~l~~~~  430 (871)
                      ...++|.+.+.+...+
T Consensus       378 ~~~~~~~~~~~i~~~t  393 (463)
T KOG2816|consen  378 SGVVSPALYGNIFALT  393 (463)
T ss_pred             hhhhhHHHHHHHHHHH
Confidence            9999999999886643

>KOG0255|consensus

Probab=99.65  E-value=3.3e-14  Score=164.56  Aligned_cols=348  Identities=14%  Similarity=0.079  Sum_probs=217.0

Q ss_pred             HhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhh
Q psy17194        302 DNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALV  381 (871)
Q Consensus       302 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~  381 (871)
                      +.++.+.....+..+.+.++..+|.++.|.++||+|||+++  ..++++..++.+..+++++++.+++.+++.|++.+..
T Consensus       111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~--~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~  188 (521)
T KOG0255|consen  111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVL--LVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP  188 (521)
T ss_pred             ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHH--HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence            44566777888899999999999999999999999999965  8888888899999999999999999999999999887


Q ss_pred             hhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCC
Q psy17194        382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKP  461 (871)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  461 (871)
                      .......   ..|..++++|+.+..+ ......++.+++..++++..  +||+.+++..+..++.++..++.++..+...
T Consensus       189 ~~~~~~~---~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~  262 (521)
T KOG0255|consen  189 LTVGFGL---VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPESPRWLL  262 (521)
T ss_pred             hHHhHhh---heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCcChHHHH
Confidence            4444444   4555666999999999 88888899999999999887  8999999988887776666433323222111


Q ss_pred             Cc---hhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCcccc
Q psy17194        462 FE---NEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETP  538 (871)
Q Consensus       462 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  538 (871)
                      .+   ++..+..++..+.       +   +......+..+.                                       
T Consensus       263 ~~g~~~~a~~~l~~~a~~-------n---~~~~~~~~~~~~---------------------------------------  293 (521)
T KOG0255|consen  263 SKGRIDEAIKILKKIAKL-------N---GRKLSVKELLRL---------------------------------------  293 (521)
T ss_pred             HcCchHHHHHHHHHHHhh-------c---CCCCCcHHHHHH---------------------------------------
Confidence            10   0000000000000       0   000000000000                                       


Q ss_pred             chhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHh
Q psy17194        539 PFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFL  618 (871)
Q Consensus       539 ~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  618 (871)
                                                    ..  ....++    ....+....+..+++.|++....+...+.++.+...
T Consensus       294 ------------------------------~~--~~~~~~----~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~  337 (521)
T KOG0255|consen  294 ------------------------------EL--LLRPLK----LLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLV  337 (521)
T ss_pred             ------------------------------HH--HhhHhh----hhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHH
Confidence                                          00  000000    000001122577888876555554544444443333


Q ss_pred             hhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhh----HHHH
Q psy17194        619 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSY----QMLM  694 (871)
Q Consensus       619 ~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~----~~~~  694 (871)
                      ...++... ..+|-+..   +.....+.....+....+...|+.|||.  ....+..+.++++++..+....    ..++
T Consensus       338 y~gl~~~~-~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (521)
T KOG0255|consen  338 YYGLSLNV-SGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRP--PLFLSLFLAGIGLLLFGWLPDDLGGWLHWI  411 (521)
T ss_pred             HHhhhhhh-hhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHH--HHHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence            33444443 23344432   2333333345555556678889997765  7778888888888888764322    1233


Q ss_pred             HHHHHH-hhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        695 LPICGI-CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       695 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      +.+++. +++.     .......+..+.+|...+..+.|..+....+|+.++|.+.-...
T Consensus       412 ~~~~~~~~~~~-----~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~  466 (521)
T KOG0255|consen  412 LPLLGKFFIGS-----AFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLR  466 (521)
T ss_pred             HHHHHHHHHHH-----HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            333322 2222     22233555666666788999999999999999999998875443

>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon

Probab=99.64  E-value=4.1e-13  Score=141.11  Aligned_cols=352  Identities=13%  Similarity=0.102  Sum_probs=235.8

Q ss_pred             HHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC-----chhHHHHHHHHHHHHHHHHHhhc-----ch-------
Q psy17194        300 IEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP-----TYQWLMVAVGLVLEGLCCFIIPF-----ST-------  362 (871)
Q Consensus       300 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~~~~~~~~~~~~~~~~~-----~~-------  362 (871)
                      +..+++......+.+.....+... .++..|..+|+.+     ||..++ ..+..+...+..+.++     ..       
T Consensus         6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI-~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~   83 (403)
T PF03209_consen    6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYI-WGGTLLQAGGLAIAPFALLLLAESGQQSSG   83 (403)
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhh-HHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence            345578888777777776655444 6899999999987     665443 3444444444333322     12       


Q ss_pred             hhH--H--HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHH
Q psy17194        363 SYQ--M--LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFL  438 (871)
Q Consensus       363 ~~~--~--l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~  438 (871)
                      +.+  .  ..+...+.|+|.....+..   .+.+.|..++|+|+++.++.....-+|.+++..+.|.+.+.+......-+
T Consensus        84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~---lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v  160 (403)
T PF03209_consen   84 PFWLGLALAALAFLLYGLGVHASGTSF---LALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQV  160 (403)
T ss_pred             ccHHHHHHHHHHHHHHHhhHhHhHHHH---HHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHH
Confidence            222  1  2233344566666654434   44455556669999999999999999999999999999998775444433


Q ss_pred             HHHHHHHHHHHHH-HHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccC
Q psy17194        439 IAFMNILYAPVLI-YLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVG  517 (871)
Q Consensus       439 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (871)
                      .....++...+.. -..+.+++.....               .   .++                               
T Consensus       161 ~~~~a~i~~~l~~ia~wg~E~r~~~~~---------------~---~~~-------------------------------  191 (403)
T PF03209_consen  161 IQGVALIALLLNLIALWGQEPRRSRRA---------------A---AAE-------------------------------  191 (403)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCcccc---------------c---CCC-------------------------------
Confidence            3333333222211 1111111000000               0   000                               


Q ss_pred             cCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhcc
Q psy17194        518 TNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  597 (871)
Q Consensus       518 ~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  597 (871)
                                                                                       ++..+....++++..
T Consensus       192 -----------------------------------------------------------------~~~~~f~~a~~~~~~  206 (403)
T PF03209_consen  192 -----------------------------------------------------------------RPRPPFREAWRQVWA  206 (403)
T ss_pred             -----------------------------------------------------------------CCCccHHHHHHHHHh
Confidence                                                                             000000112466778


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhh-ccCchhhHHHHHHHHH
Q psy17194        598 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK-LYPTYQWLMVAVGLVL  676 (871)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d-~~~~~~~~~~~~g~~~  676 (871)
                      +|+........++...+++.-...+-+|=.+++|+++.++-.+....+.+.++|-...|++.. |.+++|  ....|+..
T Consensus       207 ~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~--~a~~G~~~  284 (403)
T PF03209_consen  207 SPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR--TAALGCLL  284 (403)
T ss_pred             CCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH--HHHHHHHH
Confidence            888888888888888899888999999988999999999999999999999999999999887 455555  55677777


Q ss_pred             HhhHHhhh---cchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        677 EGLCCFII---PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       677 ~~~~l~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      .++++..+   ++..+.+.+....+.+|++.|.......+.+..+.+   +++.|..+|.-...+.++..+|..++|.+.
T Consensus       285 ~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~---~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~  361 (403)
T PF03209_consen  285 GALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTS---AGRAGLFMGAWGAAQAIARGLGTFLGGALR  361 (403)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCC---CcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76666554   344566778888899999999877665555555554   889999999999999999999999999887


Q ss_pred             hh----------hChHHHHHHHHHHHHHHHHH
Q psy17194        754 DA----------IGFTALNFLIAFMNILYAPV  775 (871)
Q Consensus       754 ~~----------~g~~~~~~~~a~~~~~~~~~  775 (871)
                      |.          .+|..+|.+=+++.++++.+
T Consensus       362 D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l  393 (403)
T PF03209_consen  362 DLVRALFGNSPALAYGVVFALEAVLLLAALVL  393 (403)
T ss_pred             HHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence            73          34666776666665555443

It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.

>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters

Probab=99.57  E-value=4.5e-18  Score=193.43  Aligned_cols=367  Identities=13%  Similarity=0.131  Sum_probs=216.4

Q ss_pred             hHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch---hhHHHHHHHHHHHHHHhhhhhhhh
Q psy17194        310 KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST---SYQMLMLPICGICFGMALVDTALL  386 (871)
Q Consensus       310 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~l~g~g~~~~~~~~~  386 (871)
                      +.++..+...++..+|.++.|.++||+|||+.+  ..+..+..++.++..+++   +.+.+.+++++.|++.|...+   
T Consensus        47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~---  121 (451)
T PF00083_consen   47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPAL--IISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYV---  121 (451)
T ss_pred             HHHHHHHHHHhhhcccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc---
Confidence            467888899999999999999999999999955  777888888888888888   899999999999999998733   


Q ss_pred             hhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh---ChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCc
Q psy17194        387 PTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI---GFTALNFLIAFMNILYAPVLIYLKNIYDFKPFE  463 (871)
Q Consensus       387 ~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~---g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (871)
                      ....++.|..|++.|+...++.+....+|..++..+.-.+.+..   +||..+.+..+..++..+...++++..+.-..+
T Consensus       122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~  201 (451)
T PF00083_consen  122 VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSK  201 (451)
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccc
Confidence            33444556567799999999999888888888777665443333   499998888777766555555555543332111


Q ss_pred             hhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHH
Q psy17194        464 NEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGA  543 (871)
Q Consensus       464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  543 (871)
                      .+.++.++...+ ....      +..++    +.+....+.+                                      
T Consensus       202 ~~~~~A~~~l~~-~~~~------~~~~~----~~~~~~~~~~--------------------------------------  232 (451)
T PF00083_consen  202 GRDEEAEKVLRK-LRGK------EIEDE----EIEEIKAEKK--------------------------------------  232 (451)
T ss_pred             cccccccccccc-cccc------ccccc----cccccccccc--------------------------------------
Confidence            111110000000 0000      00000    0000000000                                      


Q ss_pred             HHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchh----HHHHHHHHHHH-HHHHHHh
Q psy17194        544 LYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPY----IAVCSGALLMA-NVALAFL  618 (871)
Q Consensus       544 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~-~~~~~~~  618 (871)
                                                              ...+.+..+.++++++.    +........+. ..+.+..
T Consensus       233 ----------------------------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~  272 (451)
T PF00083_consen  233 ----------------------------------------ESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFI  272 (451)
T ss_pred             ----------------------------------------cccccceeeeeccccccccccccccccccccccccccccc
Confidence                                                    00000012233444322    22222122222 2222333


Q ss_pred             hhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhc----c-hhh----
Q psy17194        619 EPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP----F-STS----  689 (871)
Q Consensus       619 ~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~----~-~~~----  689 (871)
                      ..+.|..+ +..|.+..  =+......+...++.+++..+.||+|||+  ....+..+.+++.+.++    . ..+    
T Consensus       273 ~~~~~~i~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (451)
T PF00083_consen  273 FYYSPSIF-ENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK--LLIIGLLLMAICSLILGIIFFLGVSSSSWW  347 (451)
T ss_pred             cccccccc-cccccccc--ccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccc
Confidence            33444444 44566655  22334455666667777779999999987  55566666665555553    1 111    


Q ss_pred             hHHHHHHHHHH--hhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHH
Q psy17194        690 YQMLMLPICGI--CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  767 (871)
Q Consensus       690 ~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~  767 (871)
                      ....+......  +++.+.. +   ....+..|.+|.+.|+++.|+.+.+..+++.++|.+...+.+..+....+.+.++
T Consensus       348 ~~~~i~~~~l~~~~~~~g~~-~---~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~  423 (451)
T PF00083_consen  348 SILSIVFLALFFAFFSLGWG-P---LPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAG  423 (451)
T ss_pred             ccccceeeeecccccccccc-c---cccccccccccccccccccccccccccccccccccccccccccccccccchhhHH
Confidence            11111111111  2211111 1   1124445666689999999999999999999999999888888875666777776


Q ss_pred             HHHHHHHHHHHH
Q psy17194        768 MNILYAPVLIYL  779 (871)
Q Consensus       768 ~~~~~~~~~~~~  779 (871)
                      ++++...+.+++
T Consensus       424 ~~~i~~i~~~~~  435 (451)
T PF00083_consen  424 VCLIAIIFVYFF  435 (451)
T ss_pred             HHHHHHhheeEE
Confidence            666666544433

Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane

>KOG0254|consensus

Probab=99.57  E-value=4.8e-13  Score=153.90  Aligned_cols=367  Identities=11%  Similarity=0.058  Sum_probs=215.1

Q ss_pred             hHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy17194        310 KIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTL  389 (871)
Q Consensus       310 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~  389 (871)
                      +.+++.+...++..++.++.|+++|++|||+.+  ..+.+.+.++.++++++.+...+++++++.|+|.|.......   
T Consensus        90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l--~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~p---  164 (513)
T KOG0254|consen   90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL--LLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAP---  164 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcch---
Confidence            448999999999999999999999999999955  788889999999999999999999999999999999853333   


Q ss_pred             hhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hChhhHHHHHHHHHHHHHHHHHHHhhcccCCCC---ch
Q psy17194        390 GYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA--IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPF---EN  464 (871)
Q Consensus       390 ~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~--~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  464 (871)
                      .+..+..|++.||...+..+....+|..++ .+.+...++  .+||..+.+..+.+++..+..++.++..+.-.+   .+
T Consensus       165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~  243 (513)
T KOG0254|consen  165 VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLE  243 (513)
T ss_pred             hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChH
Confidence            334455566999999999999999888888 555655554  389988888777777666664444422111000   00


Q ss_pred             hhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHH
Q psy17194        465 EANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGAL  544 (871)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l  544 (871)
                      +.+......          ....  +.+.....+.                                             
T Consensus       244 ~a~~~l~~l----------~g~~--~~~~~~~~~~---------------------------------------------  266 (513)
T KOG0254|consen  244 EAKRSLKRL----------RGLS--PEDVEVELEL---------------------------------------------  266 (513)
T ss_pred             HHHHHHHHH----------hCCC--CcchHHHHHH---------------------------------------------
Confidence            000000000          0000  0000000000                                             


Q ss_pred             HhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchh-hhccchhHHHHHHHHHHHHHHHHHhhhcHH
Q psy17194        545 YQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIW-KLFMDPYIAVCSGALLMANVALAFLEPTIS  623 (871)
Q Consensus       545 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp  623 (871)
                                     +.  ...........        ..  ..+.++. +..+++.+....+..+-...+......+.+
T Consensus       267 ---------------~~--~~~~~~~~~~~--------~~--~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~  319 (513)
T KOG0254|consen  267 ---------------LK--IKLLVEAEVAE--------GK--ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYST  319 (513)
T ss_pred             ---------------HH--HHHHHhhhccc--------cc--ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehH
Confidence                           00  00000000000        00  0000111 123334444555566666666677777888


Q ss_pred             HHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcch----h-------h-hH
Q psy17194        624 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----T-------S-YQ  691 (871)
Q Consensus       624 ~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~----~-------~-~~  691 (871)
                      .+++.. |.+... -......++..+++..++..+.||+|||+  .+..+.....+++++++..    .       . .+
T Consensus       320 ~if~~~-g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~--lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~  395 (513)
T KOG0254|consen  320 TIFKSA-GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRK--LLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGW  395 (513)
T ss_pred             HHHHhc-CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHH--HHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhH
Confidence            887654 554333 45556667777778888899999999988  5566666666666655321    1       0 11


Q ss_pred             HHH--HHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHH
Q psy17194        692 MLM--LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMN  769 (871)
Q Consensus       692 ~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~  769 (871)
                      ..+  ..+....+..+.. +..+   ....+.+|.+.++.+.++...+..+...+-....-.+.+..+....|...++++
T Consensus       396 ~~~~~~~~~v~~f~~g~g-~v~w---~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~  471 (513)
T KOG0254|consen  396 LAIVFLCLFIFSFAIGWG-PVPW---VIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGIC  471 (513)
T ss_pred             HHHHHHHHHHHHHhcccc-cchh---hhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHH
Confidence            111  1111222222221 1111   223344457888998888887777766554444334444444455666666666


Q ss_pred             HHHHH
Q psy17194        770 ILYAP  774 (871)
Q Consensus       770 ~~~~~  774 (871)
                      .+...
T Consensus       472 ~~~~~  476 (513)
T KOG0254|consen  472 LLSLI  476 (513)
T ss_pred             HHHHH
Confidence            55554

>COG2270 Permeases of the major facilitator superfamily [General function prediction only]

Probab=99.54  E-value=1.2e-12  Score=137.03  Aligned_cols=179  Identities=11%  Similarity=0.084  Sum_probs=128.7

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA  671 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~  671 (871)
                      ++++.+++++...+++.++..=+.......--.|-...+|++..+..++-....+..++|.++.|++.||++.|+  ++.
T Consensus       245 ~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~--vl~  322 (438)
T COG2270         245 FKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP--VLM  322 (438)
T ss_pred             HHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce--eeh
Confidence            466777778888788888777777777777778888899999999999999999999999999999999999987  555


Q ss_pred             HHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHH
Q psy17194        672 VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  751 (871)
Q Consensus       672 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~  751 (871)
                      +++++..+..+..-+......+++.-..+|+..|......   -++.....|+++.+...|++++....++.+||.+.+.
T Consensus       323 ~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S---RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v  399 (438)
T COG2270         323 IGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS---RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV  399 (438)
T ss_pred             HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH---HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence            5555543333222222223334444455566667665543   3444444459999999999999999999999999999


Q ss_pred             hHhhhChHH-HHHHHHHHHHHHHHH
Q psy17194        752 IVDAIGFTA-LNFLIAFMNILYAPV  775 (871)
Q Consensus       752 l~~~~g~~~-~~~~~a~~~~~~~~~  775 (871)
                      +.+.+|... .+....++.+++.+.
T Consensus       400 ~t~iTg~~r~g~~~i~vll~iGl~~  424 (438)
T COG2270         400 ITQITGSSRAGVLSIIVLLLIGLLL  424 (438)
T ss_pred             HHHHhcchhhHHHHHHHHHHhhHhh
Confidence            999877533 333333333444343

>KOG3626|consensus

Probab=99.54  E-value=7.8e-13  Score=149.13  Aligned_cols=269  Identities=19%  Similarity=0.212  Sum_probs=219.7

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      ..+.++++..+...+..+.+...+..+-+.|++                           +.++.|++.+.+-++..+..
T Consensus        97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i---------------------------~Ss~sG~I~s~~dig~~l~i  149 (735)
T KOG3626|consen   97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKI---------------------------SSSQSGLIASSYDIGNLLLI  149 (735)
T ss_pred             hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC---------------------------CCCcceeEeeecccchhhhh
Confidence            345566777777888887778888888888866                           77889999999999999999


Q ss_pred             hhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh--------------------h--------------------------
Q psy17194        123 PFSGALIDRIGYDLPMMIGLCIMFLSTALFACG--------------------R--------------------------  156 (871)
Q Consensus       123 ~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a--------------------~--------------------------  156 (871)
                      .+..+..-|.-|-+.+-+|+++.+++.+++++-                    +                          
T Consensus       150 ~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  229 (735)
T KOG3626|consen  150 IFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKRE  229 (735)
T ss_pred             HhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCccccc
Confidence            999999999999999999999999999998752                    0                          


Q ss_pred             ---h--HH-HHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--------
Q psy17194        157 ---S--YG-VLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA--------  222 (871)
Q Consensus       157 ---s--~~-~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~--------  222 (871)
                         +  ++ .++++.++.|+|....++.+.+|+-|.. .+++-+..+|+...+..+|.++|-++|+++.+.+        
T Consensus       230 ~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnv-k~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~  308 (735)
T KOG3626|consen  230 KESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNV-KKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPI  308 (735)
T ss_pred             ccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccc-cccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCC
Confidence               0  23 5667889999999999999999999975 6678999999999999999999999999987532        


Q ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHhcccchhhhcc--------CCCCC----C----------cccchhhh
Q psy17194        223 -----------GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ--------KKPES----H----------STVPIWKL  269 (871)
Q Consensus       223 -----------gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~--------~~~~~----~----------~~~~~~~~  269 (871)
                                 .|..-|++.+.+.++..+..+++.++.|+..++        .+.++    .          -+...+++
T Consensus       309 ~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~l  388 (735)
T KOG3626|consen  309 GITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRL  388 (735)
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHH
Confidence                       278889999999999888888887766643210        00000    0          11235678


Q ss_pred             hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCch
Q psy17194        270 FMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTY  339 (871)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~  339 (871)
                      ++||.+...++...+.......+.+++|.|++.+||.+...+..+.....+ +..+|.+++|++.+|+.-+
T Consensus       389 l~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~  459 (735)
T KOG3626|consen  389 LSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS  459 (735)
T ss_pred             hcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence            889999999999999999999999999999999999999999988855554 5677889999999998533

>KOG2563|consensus

Probab=99.51  E-value=1.4e-12  Score=137.11  Aligned_cols=362  Identities=10%  Similarity=0.063  Sum_probs=217.8

Q ss_pred             HHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch------hhH--H
Q psy17194        295 TISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST------SYQ--M  366 (871)
Q Consensus       295 ~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~  366 (871)
                      ....+....|| +...+-|...++.+.++...+.+-|+.||+|-|...  .++..+-.++..+=..+.      ..+  .
T Consensus        66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~--llgt~ln~iGa~Ir~iss~p~v~~~f~~~l  142 (480)
T KOG2563|consen   66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL--LLGTVLNGIGAWIRLISSLPFVPPLFRRPL  142 (480)
T ss_pred             hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH--HHHHHHHHHHHHHhhhccCccccccchhhh
Confidence            34456677778 777788888899999999999999999999988744  566666666655433221      122  1


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhcc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh----C--hhh--HHH
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDV-RYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI----G--FTA--LNF  437 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~----g--~~~--~f~  437 (871)
                      ...+..+.+...-.    ...+-+.+... +++++|+.|..+..+...+|.+++-.+...+..+.    +  |..  .|+
T Consensus       143 ~~~Gq~iaa~Aq~F----im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~  218 (480)
T KOG2563|consen  143 THTGQSIAAAAQPF----ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFL  218 (480)
T ss_pred             hHHhHHHHHHhhhH----hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHH
Confidence            12222222222221    12222333333 68899999999999999999999988888777654    2  332  233


Q ss_pred             HHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccC
Q psy17194        438 LIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVG  517 (871)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (871)
                      ...++..+.+++..+.++.+.+.+             ....+.              .+.+                   
T Consensus       219 ~~~~l~~l~l~l~~~~~~~~P~tP-------------ps~s~~--------------~~~~-------------------  252 (480)
T KOG2563|consen  219 GVECLAALLLALVLFVFTKKPPTP-------------PSASQA--------------ALQD-------------------  252 (480)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCC-------------CchhHh--------------hhhc-------------------
Confidence            233333222222222222110000             000000              0000                   


Q ss_pred             cCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhcc
Q psy17194        518 TNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFM  597 (871)
Q Consensus       518 ~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  597 (871)
                                                                                          ......+++.++
T Consensus       253 --------------------------------------------------------------------~~f~~si~~~~~  264 (480)
T KOG2563|consen  253 --------------------------------------------------------------------ASFPKSIKSCFK  264 (480)
T ss_pred             --------------------------------------------------------------------CcHHHHHHHHHc
Confidence                                                                                001123588999


Q ss_pred             chhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH
Q psy17194        598 DPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  677 (871)
Q Consensus       598 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~  677 (871)
                      |++|.+..+++.+....++...+.+-.-+ ..-|++...+|++.....++.++++.+.|.+.||..+.|....... ...
T Consensus       265 n~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~-~~~  342 (480)
T KOG2563|consen  265 NRQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLY-LFA  342 (480)
T ss_pred             CccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH-HHH
Confidence            99999988887777777776665555444 3458888999999999999999999999999999977665333222 222


Q ss_pred             hhH-Hhhhcch--h-hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        678 GLC-CFIIPFS--T-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       678 ~~~-l~~~~~~--~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      .++ +.+....  . ..+.+......+|+++....|.-..+   .++...|..-++-+|+.|+..++-+.+-+.+.+...
T Consensus       343 ~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~El---gvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~  419 (480)
T KOG2563|consen  343 LVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFEL---GVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILA  419 (480)
T ss_pred             HHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceee---eeeeccccCCcccceeEEeehhHHHHHHHHHHHHHh
Confidence            233 2222211  1 12223344445555444444422222   223334777788999999999999999999999888


Q ss_pred             hhhC----hHHHHHHHHHHHHHHHHHHHHHhcc
Q psy17194        754 DAIG----FTALNFLIAFMNILYAPVLIYLKNI  782 (871)
Q Consensus       754 ~~~g----~~~~~~~~a~~~~~~~~~~~~~~~~  782 (871)
                      +..+    +....+.++..+++.+.+..+++..
T Consensus       420 ~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~  452 (480)
T KOG2563|consen  420 EDLGPPGNTFPANIFLTVSALLGAILVAFFRPD  452 (480)
T ss_pred             hccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence            8777    5555566666666666555555443

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.49  E-value=3.2e-15  Score=169.31  Aligned_cols=357  Identities=17%  Similarity=0.177  Sum_probs=3.0

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      +..+++..++..+..+.....+..+.+.|++                           +.++.|++.+.+-++.++..++
T Consensus         5 l~~~~~~~~~q~~~~g~~~~~lttiErRF~l---------------------------~S~~~G~i~s~~di~~~~~~~~   57 (539)
T PF03137_consen    5 LVFLCLLGLFQMMVSGYVNSSLTTIERRFGL---------------------------SSSQSGLISSSYDIGSLVVVLF   57 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence            3455566666666777777888888888866                           8999999999999999999999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh------------------------------------------------
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFACGR------------------------------------------------  156 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~------------------------------------------------  156 (871)
                      ..++.+|..|-|.+-+|.++.+++++++++-+                                                
T Consensus        58 vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~  137 (539)
T PF03137_consen   58 VSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSL  137 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccc
Confidence            99999998888888999999999998876410                                                


Q ss_pred             --hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh------------
Q psy17194        157 --SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA------------  222 (871)
Q Consensus       157 --s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~------------  222 (871)
                        -+..++++.++.|+|....++.+.+|+-|.+ ++++-+..+|++.+...+|.++|-++|+.+.+.+            
T Consensus       138 ~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv-~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~  216 (539)
T PF03137_consen  138 SGYFYVFILGQLLIGIGATPLYTLGITYIDDNV-SKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVG  216 (539)
T ss_dssp             --------------SSS---------------------------------------------------------------
T ss_pred             hHHHHHHHHHHHHHhccccCCccceeeeecccc-ccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCC
Confidence              1346778999999999999999999999986 5678999999999999999999999998776421            


Q ss_pred             ----------CChhHHHHHHHHHHHHHHHHHHhcccchhhhc------c---CC---------CC----------CCccc
Q psy17194        223 ----------GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLN------Q---KK---------PE----------SHSTV  264 (871)
Q Consensus       223 ----------gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~------~---~~---------~~----------~~~~~  264 (871)
                                .|..-|++.+++.++..+..+.+.++.|...+      .   +.         ++          +.-..
T Consensus       217 i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~  296 (539)
T PF03137_consen  217 ITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPK  296 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHH
Confidence                      27777888888888888877777765554300      0   00         00          01112


Q ss_pred             chhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCchhHHH
Q psy17194        265 PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTYQWLM  343 (871)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~  343 (871)
                      ..+++++||.+....+...........+.++.|.|++.+|+.++.+++++.....+ +.++|.+++|.+.+|++-+..-.
T Consensus       297 ~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~  376 (539)
T PF03137_consen  297 ALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA  376 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHH
Confidence            35668889999998888888888899999999999999999999999888765554 67788999999999985332111


Q ss_pred             HHHHHHHHHHHH------HHhh--------cchhh-------------------------------------HHHHHHHH
Q psy17194        344 VAVGLVLEGLCC------FIIP--------FSTSY-------------------------------------QMLMLPIC  372 (871)
Q Consensus       344 ~~~~~~~~~~~~------~~~~--------~~~~~-------------------------------------~~l~~~~~  372 (871)
                      ....++...+..      ++..        ....+                                     ..++...+
T Consensus       377 ~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~  456 (539)
T PF03137_consen  377 AKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLI  456 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHH
Confidence            111111111111      1110        00000                                     01111112


Q ss_pred             HHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHH-HHHHHHHHHHHHHHHHhh
Q psy17194        373 GICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS-YSLAYAIGPIVAGGIVDA  429 (871)
Q Consensus       373 l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~-~~lg~~igp~l~g~l~~~  429 (871)
                      +..+..........+......+..++++|+.|.|+.... .-+|.+-||++.|.++|.
T Consensus       457 ~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~  514 (539)
T PF03137_consen  457 LLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS  514 (539)
T ss_dssp             ----------------------------------------------------------
T ss_pred             HHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence            222222222222334444445566889999999998764 455778899999999996

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.49  E-value=2e-13  Score=127.45  Aligned_cols=137  Identities=44%  Similarity=0.672  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh
Q psy17194        111 FASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       111 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~  190 (871)
                      .+.+.++..++.++.|++.||+|||+.+..+..+..++.+++.+.++++.+.+.+++.|++.+...+...+++.|.+ |+
T Consensus         4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~   82 (141)
T TIGR00880         4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY-PP   82 (141)
T ss_pred             EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC-Ch
Confidence            44567888899999999999999999999999999999998888899999999999999999999999999999986 67


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhccc
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKP  248 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~  248 (871)
                      ++|++.+++.+....+|..+++.+++.+.+..+|++.|++.+++.++..+..+++.||
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (141)
T TIGR00880        83 EERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE  140 (141)
T ss_pred             hhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence            8999999999999999999999999999998899999999888887776666665543

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.49  E-value=1.9e-12  Score=144.44  Aligned_cols=328  Identities=16%  Similarity=0.162  Sum_probs=213.6

Q ss_pred             ccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhC-----CchHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHH
Q psy17194         98 EHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIG-----YDLPMMIGLCIMFLSTALFACG----RSYGVLFFARSLQ  168 (871)
Q Consensus        98 ~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rr~~l~~~~~~~~i~~~l~~~a----~s~~~l~~~r~l~  168 (871)
                      ++++.++++.....+...+... .-|+.|.++|.+-     ||+-++++.++.+++.+.++..    .+.....+.-++.
T Consensus        18 ~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la   96 (433)
T PF03092_consen   18 DDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLA   96 (433)
T ss_pred             HHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHH
Confidence            3445599999998888888766 4788999999862     5556777777776666655543    3566667777888


Q ss_pred             HhhhhhhhhhHHHHhhcccCC-hhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcc
Q psy17194        169 GVGSAFADTSGLAMIADRFTE-ENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK  247 (871)
Q Consensus       169 G~~~g~~~~~~~a~i~~~~~~-~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~  247 (871)
                      .+|.+....++.+++.|.... +++||...+.......+|.+++..++|.+.+..++|..|.+.+++.++..+..+++.+
T Consensus        97 ~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~  176 (433)
T PF03092_consen   97 SFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLE  176 (433)
T ss_pred             HHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence            999999999999999997521 1237888999999999999999999999999999999999998888887777777666


Q ss_pred             cchhhhccC-----CCC--------CCcccchhhhhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhC---CCchh
Q psy17194        248 PVKEQLNQK-----KPE--------SHSTVPIWKLFMDPYIAVCSG-ALLMANVALAFLEPTISLWIEDNLT---TDNWK  310 (871)
Q Consensus       248 ~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g---~s~~~  310 (871)
                      |.++..+.+     ++.        ++.....++.++++.++...+ ..++............-.+..+..+   +++..
T Consensus       177 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f  256 (433)
T PF03092_consen  177 ERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSF  256 (433)
T ss_pred             hccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHH
Confidence            522211111     000        011223455666666665544 2222221111110100011223344   78888


Q ss_pred             HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHh-hcc---------hhhHHHHHHHHHHHHHHhh
Q psy17194        311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII-PFS---------TSYQMLMLPICGICFGMAL  380 (871)
Q Consensus       311 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~l~~~~~l~g~g~~~  380 (871)
                      .+.+..+..++.++|..+..+...+..-|+++  ....++..+..+.- .+.         ++.+..+.--++..+....
T Consensus       257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~--~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i  334 (433)
T PF03092_consen  257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIF--VVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMI  334 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH--HHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHH
Confidence            88888777888888888888777777777644  34333333332221 111         1112112222233333333


Q ss_pred             hhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q psy17194        381 VDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG  431 (871)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g  431 (871)
                      .   ..+.....++..|+..-|+.+++..+..++|..++..++..+.+.++
T Consensus       335 ~---~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~  382 (433)
T PF03092_consen  335 A---FMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG  382 (433)
T ss_pred             H---HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            2   34444445555667889999999999999999999999999998876

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.48  E-value=1.9e-11  Score=126.76  Aligned_cols=231  Identities=13%  Similarity=0.155  Sum_probs=161.4

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHH
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAM  182 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~  182 (871)
                      +..|++.++.......++..++.|.++||+|||+..++-+++++++++ +-..++++.++++|++.|++.+....+-.++
T Consensus        67 ~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW  145 (354)
T PF05631_consen   67 SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESW  145 (354)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            889999999999999999999999999999999999999999999886 4456899999999999999999999988887


Q ss_pred             hhcccC----ChhhHHHHHHHHH-HHHHHHHHHhHHHHHHHHhhhCC--hhHHHHHHHHHHHHHHHHHHhcccchhhhcc
Q psy17194        183 IADRFT----EENERSQALGIAL-AFISFGCLVAPPFGGALYQFAGK--EIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ  255 (871)
Q Consensus       183 i~~~~~----~~~~r~~~~g~~~-~~~~~G~~lg~~l~~~l~~~~gw--r~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~  255 (871)
                      ...-..    |++..+..++... ..+++-.+++.+++-++.+..+.  ..||.....+.++..+++....+|...+..+
T Consensus       146 ~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~  225 (354)
T PF05631_consen  146 MVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSS  225 (354)
T ss_pred             HHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCccc
Confidence            643221    3333444444444 33444455566666666666554  8899888888777766655544443221111


Q ss_pred             CCC-CCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh
Q psy17194        256 KKP-ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK  334 (871)
Q Consensus       256 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d  334 (871)
                      +.+ .+......+.+++||+++.+.+...+.-...+.+.....+-++.  +-...-.|++++.+..+.++|+.+..++..
T Consensus       226 ~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s  303 (354)
T PF05631_consen  226 SSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSLFSRLLS  303 (354)
T ss_pred             ccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            111 11112234556778998888877777766665554443333431  112345799999999999999999877665


Q ss_pred             hc
Q psy17194        335 LY  336 (871)
Q Consensus       335 r~  336 (871)
                      +.
T Consensus       304 ~~  305 (354)
T PF05631_consen  304 KS  305 (354)
T ss_pred             CC
Confidence            43

>KOG3762|consensus

Probab=99.38  E-value=1.5e-11  Score=131.50  Aligned_cols=186  Identities=13%  Similarity=0.127  Sum_probs=148.4

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      +++.++...+++....+.......+.+++--++++ ++..+...|........+.++.-++.+++.+|+|+-+++  ..+
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~--~lg  442 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVM--YLG  442 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhccccee--eeh
Confidence            56677776666666777777777777777555555 566677778777777888899999999999999999955  778


Q ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH-HHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGI  426 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~-~~~~lg~~igp~l~g~l  426 (871)
                      +....+-.+.+....|.|..+..-++.|+..++.   .....+++....||+.+.++.++.. ....+|-.+|.+++|.+
T Consensus       443 La~~~~Rf~~~S~L~n~W~vLPieilqgit~ali---Waa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~  519 (618)
T KOG3762|consen  443 LACNVGRFLYYSYLQNPWMVLPIEILQGITHALI---WAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV  519 (618)
T ss_pred             hhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHH---HHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh
Confidence            8888888888888999999888889999999988   4455566666677899999999985 46778999999999999


Q ss_pred             HhhhChhhHHHHHHHHHHHHHHHHHHHhhcccC
Q psy17194        427 VDAIGFTALNFLIAFMNILYAPVLIYLKNIYDF  459 (871)
Q Consensus       427 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~  459 (871)
                      .+.+|-+..|.+.++.+++.+++...+....++
T Consensus       520 v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~  552 (618)
T KOG3762|consen  520 VERFGARTTFRIFGIACLVTLALFISIQLLLKR  552 (618)
T ss_pred             heeehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            999999999999998888777766655544333

>KOG3626|consensus

Probab=99.33  E-value=2.8e-10  Score=128.71  Aligned_cols=290  Identities=13%  Similarity=0.103  Sum_probs=188.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.+..+.....+.......+....-..+++.++++..+.|++.+.+-++..+...+..+...|..|-|++  ..+.++.+
T Consensus        96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~I--g~G~~~m~  173 (735)
T KOG3626|consen   96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWI--GIGLVLMG  173 (735)
T ss_pred             chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcccee--eechhHHH
Confidence            3444444444443333334444444457888999999999999999999999999999999998877744  77888888


Q ss_pred             HHHHHhhcc--------------------h-----------------------------h--hH-HHHHHHHHHHHHHhh
Q psy17194        353 LCCFIIPFS--------------------T-----------------------------S--YQ-MLMLPICGICFGMAL  380 (871)
Q Consensus       353 ~~~~~~~~~--------------------~-----------------------------~--~~-~l~~~~~l~g~g~~~  380 (871)
                      ++.+++.+.                    +                             +  .+ .++++.++.|+|...
T Consensus       174 lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tp  253 (735)
T KOG3626|consen  174 LGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATP  253 (735)
T ss_pred             HHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCC
Confidence            777776431                    0                             0  11 233444555555554


Q ss_pred             hhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh------------------C-hhhHHHHHHH
Q psy17194        381 VDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI------------------G-FTALNFLIAF  441 (871)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~------------------g-~~~~f~~~~~  441 (871)
                      ..+.   -++++-|...+++.....|+..++..+|.++|=.+++.+...+                  | |...|++.+.
T Consensus       254 i~tl---GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~  330 (735)
T KOG3626|consen  254 IFTL---GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGA  330 (735)
T ss_pred             CccC---CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHH
Confidence            4222   2444444445577899999999999999999999999876531                  2 4455666777


Q ss_pred             HHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCC
Q psy17194        442 MNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGV  521 (871)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (871)
                      +.++..+.++++++..++...+.+.++...         .+.++. ..                     .++...     
T Consensus       331 ~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~---------~k~~~~-~~---------------------~~~~~~-----  374 (735)
T KOG3626|consen  331 LLLFSAVPLFFFPKELPKSQKRKRARDLHV---------LKTESG-GA---------------------KSDKTF-----  374 (735)
T ss_pred             HHHHHHHHHHhCcccCccccccchhhhhcc---------cccccc-cc---------------------cCCcch-----
Confidence            777766666666664433222100000000         000000 00                     000000     


Q ss_pred             cchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhH
Q psy17194        522 SNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYI  601 (871)
Q Consensus       522 ~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  601 (871)
                                                                                  .+..++-...++++++||.+
T Consensus       375 ------------------------------------------------------------~~~ikdfp~s~~~ll~N~if  394 (735)
T KOG3626|consen  375 ------------------------------------------------------------GKKIKDFPKSIKRLLSNPIF  394 (735)
T ss_pred             ------------------------------------------------------------hhhHHHHHHHHHHHhcCchH
Confidence                                                                        00000111245899999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchh-hhhhhhhhhhhhhccC
Q psy17194        602 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFP-HVFGVVITVKLAKLYP  663 (871)
Q Consensus       602 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~-~~i~~~~~g~l~d~~~  663 (871)
                      +...++..+-...+.++.+++|-|+++.||.++..+.+++...++. ..+|.+++|++.+|+.
T Consensus       395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk  457 (735)
T KOG3626|consen  395 MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK  457 (735)
T ss_pred             HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence            9999999999999999999999999999999999999999766665 5568889999999874

>KOG2816|consensus

Probab=99.32  E-value=4.2e-10  Score=124.47  Aligned_cols=319  Identities=14%  Similarity=0.141  Sum_probs=202.7

Q ss_pred             HHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy17194        319 FFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYV  398 (871)
Q Consensus       319 ~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~  398 (871)
                      ++...+..+..|.++||+|||..+.  ..+....+..+...+.. +| .++   +.++..+.. .......+++.|....
T Consensus        72 ~~~~~i~s~~iG~lSD~~grk~~L~--~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~-~~~s~~~a~vadis~~  143 (463)
T KOG2816|consen   72 GLLTLISSPLIGALSDRYGRKVVLL--LPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFS-AIFSVGFAYVADISSE  143 (463)
T ss_pred             HHHHHHHHhhhHHhhhhhhhhhhHH--HHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchh-hhhhhhhhheeeccch
Confidence            5677888899999999999998663  33333333333332222 22 222   222222211 2234455666666666


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCccccc
Q psy17194        399 SVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEY  478 (871)
Q Consensus       399 ~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  478 (871)
                      ++|....|+.+.....+..++|.+++.+.+..|+...|.+..+..++..+......++...++.+++            .
T Consensus       144 ~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~------------~  211 (463)
T KOG2816|consen  144 EERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD------------A  211 (463)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc------------c
Confidence            8999999999999999999999999999999999999999888877776655443331111110000            0


Q ss_pred             CcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHH
Q psy17194        479 QTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILA  558 (871)
Q Consensus       479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~  558 (871)
                      +...   .........+..+.                                                           
T Consensus       212 ~~~~---~~~~~~~~~~~~~~-----------------------------------------------------------  229 (463)
T KOG2816|consen  212 TLRE---LTPGSLDSSHVADA-----------------------------------------------------------  229 (463)
T ss_pred             cccc---cCCCcccchhhhhh-----------------------------------------------------------
Confidence            0000   00000000000000                                                           


Q ss_pred             HHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhh-cHHHHHHHhcCCCccch
Q psy17194        559 FVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEP-TISLWIEDNLTTDNWKI  637 (871)
Q Consensus       559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~lp~~l~~~~g~s~~~~  637 (871)
                                                .+    ...+.=.+|..+..++..++....-.+-.. .++.|+...++|+..+.
T Consensus       230 --------------------------~~----~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~  279 (463)
T KOG2816|consen  230 --------------------------FQ----SLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEF  279 (463)
T ss_pred             --------------------------hh----hhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHH
Confidence                                      00    000111123333333344433333332222 45677888899999999


Q ss_pred             hhhhhccchhhhhhhhhhh-hhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhh
Q psy17194        638 GMIWLPAFFPHVFGVVITV-KLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLG  716 (871)
Q Consensus       638 gl~~~~~~~~~~i~~~~~g-~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  716 (871)
                      +.+.+.......+++.+.. .+...++.++  .+..|+....+.++++++.++.|......+..++.. ...+..-+...
T Consensus       280 s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~--~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~~~pa~~s~~s  356 (463)
T KOG2816|consen  280 SDLLSLVSILGIISQLLLLPLLSSILGEKR--LISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-IVFPAIRAFAS  356 (463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--HhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-chhHHHHhHHH
Confidence            9999988888888888765 6777788877  888999999999999999888887665555555433 33344555666


Q ss_pred             hhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhh
Q psy17194        717 YLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  755 (871)
Q Consensus       717 ~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~  755 (871)
                      ..++   ++++|.+.++...++.+...++|.+-+.++..
T Consensus       357 ~~v~---~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~  392 (463)
T KOG2816|consen  357 ILVS---PEEQGKVFGIISGIEGLSGVVSPALYGNIFAL  392 (463)
T ss_pred             hhcc---cccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence            6666   88999999999999999999999999987653

>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins

Probab=99.30  E-value=2.8e-10  Score=127.01  Aligned_cols=371  Identities=15%  Similarity=0.176  Sum_probs=215.5

Q ss_pred             HHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC----chhHHHHHHHHHHHHHHHHHhhcc----hhhHH
Q psy17194        295 TISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP----TYQWLMVAVGLVLEGLCCFIIPFS----TSYQM  366 (871)
Q Consensus       295 ~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g----~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  366 (871)
                      ....|+++++|.++.+.....+...+...+ -++.|.++|-+.    |||.++ .++..+..++.+.++..    .+...
T Consensus        11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~-~i~~~~~~~~~~~~~~~~~~~~s~~~   88 (433)
T PF03092_consen   11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYM-IIGWLLGAVSALVLALLPASESSAAI   88 (433)
T ss_pred             HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHH-HHHHHHHHHHHHHHHhcccccchhhh
Confidence            344568899999999988877766666554 577799999873    444443 44444443333333322    24455


Q ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHH
Q psy17194        367 LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILY  446 (871)
Q Consensus       367 l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~  446 (871)
                      ..+..++..+|........-....+.....|.+ +|...+.......+|+.++..+.|.+.+..+++..|.+.+.+.++.
T Consensus        89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~  167 (433)
T PF03092_consen   89 AVVLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLM  167 (433)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHH
Confidence            555667778888887777777777777665555 8999999999999999999999999999999999999888777766


Q ss_pred             HHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhh
Q psy17194        447 APVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK  526 (871)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (871)
                      .+..+++.++++++..+ +...              ..+. +.+.....                               
T Consensus       168 ~~~~~~~~~e~~~~~~~-~~~~--------------~~~~-~~~~~~~~-------------------------------  200 (433)
T PF03092_consen  168 LIVALFLLEERKVRPAD-EVFS--------------FGKE-EVPCLFGS-------------------------------  200 (433)
T ss_pred             HHHHHHhhhhccccccc-hhhc--------------cccc-ccchhhHH-------------------------------
Confidence            55555554431111100 0000              0000 00000000                               


Q ss_pred             hccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHH
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                                                                                .++....+++.++.|.++...+
T Consensus       201 ----------------------------------------------------------~~~~~~~l~~~~~~~~i~~~~~  222 (433)
T PF03092_consen  201 ----------------------------------------------------------FREQLSELWRALQQRAIWQPIL  222 (433)
T ss_pred             ----------------------------------------------------------HHHHHHHHHHHHhhhHHHHHHH
Confidence                                                                      0000113477788888887665


Q ss_pred             -HHHHHHHHHHHhhhcHHHHH-HHhcC---CCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHH
Q psy17194        607 -ALLMANVALAFLEPTISLWI-EDNLT---TDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  681 (871)
Q Consensus       607 -~~~~~~~~~~~~~~~lp~~l-~~~~g---~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l  681 (871)
                       ..++........ ..-..|+ .+..+   +|+...|.+.....++.++|..+..++..+..-|+. .....++....++
T Consensus       223 ~~~~~~~~~~~~~-~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~-~~~t~~~~~~~~l  300 (433)
T PF03092_consen  223 FFIFFFNLPPSIS-SASSFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRI-FVVTTLVSVLASL  300 (433)
T ss_pred             HHHHHHHhccCCC-CccEEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHhc
Confidence             222222211111 0101122 23345   899999999888888888888877776666655553 2222222222222


Q ss_pred             hhh----cc------hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHH
Q psy17194        682 FII----PF------STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  751 (871)
Q Consensus       682 ~~~----~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~  751 (871)
                      +-+    .+      .+. +.++..-++..+-....+.+.....+++.+   ++..|+.+|+...+.++|..++..++..
T Consensus       301 ~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP---~G~Egt~yall~s~~Nlg~~~s~~lg~~  376 (433)
T PF03092_consen  301 FDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLAARLCP---KGSEGTVYALLASFSNLGSSVSSTLGAF  376 (433)
T ss_pred             ccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHHHHHCC---CCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            211    11      111 111112222222222222333344454444   8889999999999999999999999998


Q ss_pred             hHhhhC--------hHHHHHHHHHHHHHHHHHHHHH
Q psy17194        752 IVDAIG--------FTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       752 l~~~~g--------~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      +.+.++        ..+...+..++.++..+++.++
T Consensus       377 l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lL  412 (433)
T PF03092_consen  377 LMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLL  412 (433)
T ss_pred             HHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHc
Confidence            887665        2334444455554444444344

Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).

>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs)

Probab=99.28  E-value=3.2e-13  Score=153.12  Aligned_cols=364  Identities=12%  Similarity=0.098  Sum_probs=1.6

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcch----h----------
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFST----S----------  363 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~----------  363 (871)
                      .-++++|+++..+.|++.+.+-++.++..++..++.+|..|-|++  ..+.++.+++.+++++.+    .          
T Consensus        27 ttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwi--g~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~  104 (539)
T PF03137_consen   27 TTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWI--GIGALLMGLGSLLFALPHFLSGPYSYEEASNSN  104 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccee--eecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence            347888999999999999999999999999999999987666644  777778888777764210    0          


Q ss_pred             ------------------------------------hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH
Q psy17194        364 ------------------------------------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI  407 (871)
Q Consensus       364 ------------------------------------~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi  407 (871)
                                                          ...++++.++.|+|....   ..--.+++-|..+++..+...|+
T Consensus       105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl---~tLG~tYiDDnv~~~~splYiGi  181 (539)
T PF03137_consen  105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPL---YTLGITYIDDNVSKKNSPLYIGI  181 (539)
T ss_dssp             -----------------------------------------------SSS------------------------------
T ss_pred             cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCC---ccceeeeeccccccccCccchhh
Confidence                                                112333444555555544   33334555566677888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhh---------------------hC-hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchh
Q psy17194        408 ADISYSLAYAIGPIVAGGIVDA---------------------IG-FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENE  465 (871)
Q Consensus       408 ~~~~~~lg~~igp~l~g~l~~~---------------------~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  465 (871)
                      ..+...+|.++|-.+++.+...                     .| |...|++.+++.++..+-++.++|...+....++
T Consensus       182 ~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~  261 (539)
T PF03137_consen  182 LYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQE  261 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccc
Confidence            9999999999988888876532                     12 3344445555555554444455543322210000


Q ss_pred             hhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHH
Q psy17194        466 ANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALY  545 (871)
Q Consensus       466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~  545 (871)
                      ..+..+.   +..+.   ++++..        +.       +   . ...                              
T Consensus       262 ~~~~~~~---~~~~~---~~~~~~--------~~-------~---~-~~~------------------------------  286 (539)
T PF03137_consen  262 EKESSER---KEEDS---DKDSFK--------DP-------K---S-KKS------------------------------  286 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             hhhhhhc---chhhh---hhhccc--------cc-------c---c-ccc------------------------------
Confidence            0000000   00000   000000        00       0   0 000                              


Q ss_pred             hhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHH
Q psy17194        546 QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLW  625 (871)
Q Consensus       546 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~  625 (871)
                                                         ..+..++-...++++++||.++...++..+......++.+++|.|
T Consensus       287 -----------------------------------~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKy  331 (539)
T PF03137_consen  287 -----------------------------------FGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKY  331 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -----------------------------------hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                               000001112235889999999999999999999999999999999


Q ss_pred             HHHhcCCCccchhhhhhccch-hhhhhhhhhhhhhhccCch--hh-HHHHHHHHHHhhH---Hhhhc--------chhh-
Q psy17194        626 IEDNLTTDNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTY--QW-LMVAVGLVLEGLC---CFIIP--------FSTS-  689 (871)
Q Consensus       626 l~~~~g~s~~~~gl~~~~~~~-~~~i~~~~~g~l~d~~~~~--~~-~~~~~g~~~~~~~---l~~~~--------~~~~-  689 (871)
                      +|..|+.++.+++++.....+ +.++|.+++|.+.+|+..+  +. ....+..++..+.   ++++.        ...+ 
T Consensus       332 lE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y  411 (539)
T PF03137_consen  332 LESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPY  411 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCcc
Confidence            999999999999999876666 5667889999999988432  11 0111111111111   11110        0000 


Q ss_pred             ------------------------------------hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH
Q psy17194        690 ------------------------------------YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI  733 (871)
Q Consensus       690 ------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~  733 (871)
                                                          -..+.+.++++.+.........+|...-.....++++++.|.|+
T Consensus       412 ~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv  491 (539)
T PF03137_consen  412 HNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGV  491 (539)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhH
Confidence                                                01122222222222222222233333333444458999999999


Q ss_pred             HH-HHHHHHHhHhhhhHHHhHhhh
Q psy17194        734 AD-ISYSLAYAIGPIVAGGIVDAI  756 (871)
Q Consensus       734 ~~-~~~~~g~~~gp~~~g~l~~~~  756 (871)
                      .. +.|-+|..=||++.|.++|+.
T Consensus       492 ~~~~~rllg~IPgPIifG~iiD~t  515 (539)
T PF03137_consen  492 QWLIIRLLGFIPGPIIFGAIIDST  515 (539)
T ss_dssp             ------------------------
T ss_pred             HHHHHHhhcCcchHHHHhHHHhhh
Confidence            77 456678899999999999863

Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.

>KOG2325|consensus

Probab=99.21  E-value=5.9e-10  Score=121.29  Aligned_cols=174  Identities=13%  Similarity=0.194  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCc-hhHHHHHHHHHHHH
Q psy17194        275 IAVCSGALLMANVALAFLEPTISLWIED-NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT-YQWLMVAVGLVLEG  352 (871)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~  352 (871)
                      .++.....++.......+.+..-.|+++ +.+.+....|++.+...++..++.++.|+...|.+. |+.+  ..+.++..
T Consensus        36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl--i~s~ii~~  113 (488)
T KOG2325|consen   36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL--IVSFLIAI  113 (488)
T ss_pred             HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH--HHHHHHHH
Confidence            3444444555444444444444456655 356777888999999999999999999999999884 3333  45666666


Q ss_pred             HHHHHh-hc---ch-hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        353 LCCFII-PF---ST-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       353 ~~~~~~-~~---~~-~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      ++.+++ ..   .+ ..+.+++++++.|+|.+..    ...=.++++....++|.++++..+.+..+|.++||.+...+.
T Consensus       114 ~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~----a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~  189 (488)
T KOG2325|consen  114 IGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF----AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT  189 (488)
T ss_pred             HHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH----HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence            776666 22   23 5677888999999998765    444556666666689999999988888888888887765543


Q ss_pred             hhh--C-----------hhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        428 DAI--G-----------FTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       428 ~~~--g-----------~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                      ...  |           |...-|+.+++.++.++...+..
T Consensus       190 ~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f  229 (488)
T KOG2325|consen  190 PLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF  229 (488)
T ss_pred             hhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence            211  1           44556666666666655544433

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.17  E-value=1.8e-08  Score=107.81  Aligned_cols=366  Identities=9%  Similarity=0.034  Sum_probs=217.3

Q ss_pred             HHHHHHHHHHHHh-hCCCchhHHH-HHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHH
Q psy17194        291 FLEPTISLWIEDN-LTTDNWKIGM-IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLM  368 (871)
Q Consensus       291 ~~~~~~~~~l~~~-~g~s~~~~g~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  368 (871)
                      -..+++..|+.+. .|++..++.- +.-...-......++...+.|..+.|+++  +...+...+...++.+.++...+-
T Consensus        21 PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi--il~~~~~i~t~~lll~~~sv~~mq   98 (412)
T PF01770_consen   21 PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVI--ILQALSYIITWLLLLFGTSVLAMQ   98 (412)
T ss_pred             CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHH--HHHHHHHHHHHHHHHHHCcHHHHH
Confidence            3457777888776 7888887653 33333345666777888999999988854  555555555566666778888888


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hChhhHHHHHHHHHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA--IGFTALNFLIAFMNILY  446 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~--~g~~~~f~~~~~~~~~~  446 (871)
                      +.-+..|+..+.-    .+..+++-...++++.-++.+.......+|..++..++-.+...  ..+....++......++
T Consensus        99 ~~q~~yg~~~a~e----vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a  174 (412)
T PF01770_consen   99 LMQFFYGLATAAE----VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLA  174 (412)
T ss_pred             HHHHHHHHHHHHH----HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            8778888777764    45555666666668888899999888889999999888877763  34666666666555666


Q ss_pred             HHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhh
Q psy17194        447 APVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFK  526 (871)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  526 (871)
                      +++.+++++.++....+++........+   .+..+.++.                   .+++   ....++.....+..
T Consensus       175 ~~~~~fLP~~~~S~~f~r~~~~~~~~~~---~~~~~~~~~-------------------~~~~---~~~~~~~~~~~~~~  229 (412)
T PF01770_consen  175 LLIALFLPMPKRSLFFHRKPPAEQDANE---SESDKMNES-------------------PESS---SSTEKSPSTESSSR  229 (412)
T ss_pred             HHHHHHcCCCCcccceeccCcccccccc---ccccccccc-------------------cccc---cccccCcccccchH
Confidence            6666666664333222211111000000   000000000                   0000   00000000000000


Q ss_pred             hccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHH
Q psy17194        527 ASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       527 ~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                      .                              .         .+                ..-...+++..++|.++.-++
T Consensus       230 ~------------------------------~---------~l----------------~~l~~~~~~~y~~~~ll~WSl  254 (412)
T PF01770_consen  230 K------------------------------S---------VL----------------RLLWKDFKSCYSNPRLLLWSL  254 (412)
T ss_pred             H------------------------------H---------HH----------------HHHHHHHHHHhcCchHHHHHH
Confidence            0                              0         00                000113567788999888777


Q ss_pred             HHHHHHHHHHHhhhcHHHHHHHh--cCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhh
Q psy17194        607 ALLMANVALAFLEPTISLWIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFII  684 (871)
Q Consensus       607 ~~~~~~~~~~~~~~~lp~~l~~~--~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~  684 (871)
                      ...+...+++.+....-...++.  -+-+..-.|.+-....+...++++..|++..++.+...+.+.....+.+.+++++
T Consensus       255 WWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm  334 (412)
T PF01770_consen  255 WWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLM  334 (412)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            77777777777666665555443  3455556788888788888888888999866655444345555556667778888


Q ss_pred             cchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHh
Q psy17194        685 PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG  745 (871)
Q Consensus       685 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~g  745 (871)
                      .+..++|..-+..++++....+..+....-++...+   .+..|.+.|+|+++..+-..+-
T Consensus       335 ~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~---~e~yaLVFGiNtf~Al~LQtil  392 (412)
T PF01770_consen  335 SFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLS---EERYALVFGINTFVALVLQTIL  392 (412)
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccceeeeeeeHHHHHHHHHHhe
Confidence            888888876555555444333333332223333333   6888999999988666555443

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX)

Probab=99.15  E-value=2.4e-07  Score=99.38  Aligned_cols=305  Identities=11%  Similarity=0.055  Sum_probs=204.9

Q ss_pred             cCchhHHH-HHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhH
Q psy17194        101 EGEDSATG-VLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSG  179 (871)
Q Consensus       101 ~~s~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~  179 (871)
                      +.+..|+. -+.-...-.++...++...+.|..+.|++++++.+...+...+..+.++...+-+.-+..|++.+. ..+.
T Consensus        36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay  114 (412)
T PF01770_consen   36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAY  114 (412)
T ss_pred             CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHH
Confidence            45665554 455555666777888999999999999999999999999999999999999999999999999986 5676


Q ss_pred             HHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--CChhHHHHHHHHHHHHHHHHHHhcccchhh-----
Q psy17194        180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFA--GKEIPFLILAFVSLLDGFMLLLVMKPVKEQ-----  252 (871)
Q Consensus       180 ~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~--gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~-----  252 (871)
                      .+++-..+ |+++-.++.+...++.-+|..++.++|-.+....  +++...++......+.+++.++ +|.++..     
T Consensus       115 ~sYiys~v-~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f-LP~~~~S~~f~r  192 (412)
T PF01770_consen  115 YSYIYSVV-DKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF-LPMPKRSLFFHR  192 (412)
T ss_pred             HHHheeec-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH-cCCCCcccceec
Confidence            88888877 6688999999999999999999999998887643  3555555555444444444444 4432210     


Q ss_pred             hc-----------c---CCCCC-----Ccc---------------cchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        253 LN-----------Q---KKPES-----HST---------------VPIWKLFMDPYIAVCSGALLMANVALAFLEPTISL  298 (871)
Q Consensus       253 ~~-----------~---~~~~~-----~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (871)
                      ..           +   +.+++     +..               .+.++..++|.++...+-..+...++..+..+...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~  272 (412)
T PF01770_consen  193 KPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQS  272 (412)
T ss_pred             cCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHH
Confidence            00           0   00000     000               11233445676666665555656666666555555


Q ss_pred             HHHHh--hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q psy17194        299 WIEDN--LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICF  376 (871)
Q Consensus       299 ~l~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~  376 (871)
                      ...+.  -+-....-|.+-....+.+.++.+..|++..++.+..-+.+....++.+..++++...++.|..+++.++++.
T Consensus       273 LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~  352 (412)
T PF01770_consen  273 LWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRS  352 (412)
T ss_pred             HHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            44433  1223334577777778888889999999977776655444455555667777788888999998888888776


Q ss_pred             HHhhhhhhhhhhhhhhhccccccchhhHHHHHHHH
Q psy17194        377 GMALVDTALLPTLGYLVDVRYVSVYGSIYAIADIS  411 (871)
Q Consensus       377 g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~  411 (871)
                      ...+..+...   ..++.....+..|..+|+.++.
T Consensus       353 ~y~fliTiA~---~qIA~~l~~e~yaLVFGiNtf~  384 (412)
T PF01770_consen  353 LYMFLITIAS---FQIAKNLSEERYALVFGINTFV  384 (412)
T ss_pred             HHHHHHHHHH---HHHHHhccccceeeeeeeHHHH
Confidence            6666533322   2333333346667777766543

Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane

>KOG3762|consensus

Probab=99.07  E-value=2.1e-09  Score=115.44  Aligned_cols=180  Identities=13%  Similarity=0.134  Sum_probs=142.1

Q ss_pred             hhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHH
Q psy17194        594 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  673 (871)
Q Consensus       594 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g  673 (871)
                      +++.++...+..+...+.+++.....+++--++|+ +|-.+..-|.+-..-..+-++.-+..+++.+|+|..+  ++..|
T Consensus       366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~--v~~lg  442 (618)
T KOG3762|consen  366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVN--VMYLG  442 (618)
T ss_pred             HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccc--eeeeh
Confidence            67788888777777777777777777777666755 4666667776666667777778888899999999888  77788


Q ss_pred             HHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHH-HHHHHHHhHhhhhHHHh
Q psy17194        674 LVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGI  752 (871)
Q Consensus       674 ~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~-~~~~~g~~~gp~~~g~l  752 (871)
                      +...++=++.++.-.+.|..++.-+.=|+..+++..   ++.+|..+..||+.++++.|+.. ....+|-.+|.+++|.+
T Consensus       443 La~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWa---a~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~  519 (618)
T KOG3762|consen  443 LACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWA---AIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV  519 (618)
T ss_pred             hhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHH---HHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh
Confidence            888887777777778888777666777777777655   55667777777999999999987 57788999999999999


Q ss_pred             HhhhChHHHHHHHHHHHHHHHHHHHHH
Q psy17194        753 VDAIGFTALNFLIAFMNILYAPVLIYL  779 (871)
Q Consensus       753 ~~~~g~~~~~~~~a~~~~~~~~~~~~~  779 (871)
                      .+++|-+..|.+.++.+++..+....+
T Consensus       520 v~~fg~~ttf~~~giAcl~~l~~~~~i  546 (618)
T KOG3762|consen  520 VERFGARTTFRIFGIACLVTLALFISI  546 (618)
T ss_pred             heeehhHHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999988888776554444

>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function

Probab=99.04  E-value=1.4e-07  Score=98.21  Aligned_cols=146  Identities=15%  Similarity=0.111  Sum_probs=102.6

Q ss_pred             HhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhh
Q psy17194        302 DNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALV  381 (871)
Q Consensus       302 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~  381 (871)
                      +.+|++..+++.++........+...+.|.++||+|||+.-  +...++.++.++.- ..++++.+++++++.|++..+.
T Consensus        62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~c--l~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTSLL  138 (354)
T PF05631_consen   62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKAC--LLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATSLL  138 (354)
T ss_pred             HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH--HHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999843  55555666666543 4578999999999999999988


Q ss_pred             hhhhhhhhh-hhh-ccccccchhhHHHHHH-HHHHHHHHHHHHHHHHHHhhhCh--hhHHHHHHHHHHHHHHHH
Q psy17194        382 DTALLPTLG-YLV-DVRYVSVYGSIYAIAD-ISYSLAYAIGPIVAGGIVDAIGF--TALNFLIAFMNILYAPVL  450 (871)
Q Consensus       382 ~~~~~~~~~-~~~-~~~~~~~rg~a~gi~~-~~~~lg~~igp~l~g~l~~~~g~--~~~f~~~~~~~~~~~~~~  450 (871)
                      ....-+.+. +.. ..+|++..+...+... ..+.+-.+++..++.++.+..|.  ...|.....+.+++.++.
T Consensus       139 fS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I  212 (354)
T PF05631_consen  139 FSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI  212 (354)
T ss_pred             HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence            665555432 111 1234454555555554 33445556666677777777665  667777666665555443

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.03  E-value=6.5e-07  Score=97.98  Aligned_cols=381  Identities=12%  Similarity=0.045  Sum_probs=211.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHH-----HHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA-----VGL  348 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~-----~~~  348 (871)
                      ..+.++...++.....-+.....+.++.+.+.-+-.-.+.....-.+..++..+..|.+.||..|.+.....     .+.
T Consensus         3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv   82 (432)
T PF06963_consen    3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV   82 (432)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence            345566777777777778888888888887765555555555555667777888889999999888743211     111


Q ss_pred             HHHHHHHHH-hhcchh----hHHH---HHHHHHHHHHHhhhhhhhhh-hhhhhhc---cccccchhhHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFI-IPFSTS----YQML---MLPICGICFGMALVDTALLP-TLGYLVD---VRYVSVYGSIYAIADISYSLAY  416 (871)
Q Consensus       349 ~~~~~~~~~-~~~~~~----~~~l---~~~~~l~g~g~~~~~~~~~~-~~~~~~~---~~~~~~rg~a~gi~~~~~~lg~  416 (871)
                      .+.....+. ......    .+..   ++...+.+.-.-........ .--+.+.   ...++...+.++...-.-.+.-
T Consensus        83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck  162 (432)
T PF06963_consen   83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK  162 (432)
T ss_pred             HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence            111111111 111110    1111   11111112111111000000 0011111   1134566777887777778899


Q ss_pred             HHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHH-HHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccc
Q psy17194        417 AIGPIVAGGIVDAIGFTALNFLIAFMNILYAPV-LIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKN  495 (871)
Q Consensus       417 ~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (871)
                      .++|.+.|.+.+..+......+.++..++..+. ++++.+..++.+.-.+++...++++.+..+     +..+.    ++
T Consensus       163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~-----~~~~~----~~  233 (432)
T PF06963_consen  163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEE-----SSSES----SS  233 (432)
T ss_pred             HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccccccc-----ccccc----cc
Confidence            999999999999899888888777777776665 344444333222111100000000000000     00000    00


Q ss_pred             cccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccc
Q psy17194        496 HLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPV  575 (871)
Q Consensus       496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  575 (871)
                        +                       .+.                                               .++.
T Consensus       234 --~-----------------------~~~-----------------------------------------------~~~~  241 (432)
T PF06963_consen  234 --D-----------------------PSI-----------------------------------------------LKRL  241 (432)
T ss_pred             --h-----------------------hhH-----------------------------------------------HHHH
Confidence              0                       000                                               0000


Q ss_pred             hhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhh
Q psy17194        576 KEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVIT  655 (871)
Q Consensus       576 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~  655 (871)
                      .+      ...+...+|+..+++|.+. ..++..+.|+...++...+-.|+... |+++...|.+-..-++..+.|..+.
T Consensus       242 ~~------~~~~~~~~w~~Y~~q~vfl-as~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~  313 (432)
T PF06963_consen  242 WN------PLRTIIRGWRTYFRQPVFL-ASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVY  313 (432)
T ss_pred             HH------HHHHHhccHHHHHhCHHHH-HHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            00      0000112456666666544 45566666666666777888888655 9999999999999999999999999


Q ss_pred             hhhhhccCchhhHHHHHHHHHHhhH------Hhhhcchh----hhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q psy17194        656 VKLAKLYPTYQWLMVAVGLVLEGLC------CFIIPFST----SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS  725 (871)
Q Consensus       656 g~l~d~~~~~~~~~~~~g~~~~~~~------l~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  725 (871)
                      .++.+|+|..|  .-..++.....+      .++.+-.+    +...++.+++.-=+|.-.......-++++.+|   ++
T Consensus       314 p~l~~riGlvr--~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~---~~  388 (432)
T PF06963_consen  314 PWLMKRIGLVR--AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVP---ES  388 (432)
T ss_pred             HHHHHHhcchh--hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCC---HH
Confidence            99999999877  444444333222      22222222    23334455555555555555555556666666   88


Q ss_pred             ccchHHhHHHHHHHHHHhHhhhh
Q psy17194        726 VYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       726 ~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      +||...|+-+...++-..+--.+
T Consensus       389 ~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  389 ERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHH
Confidence            89999999998888877765444

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>TIGR00880 2_A_01_02 Multidrug resistance protein

Probab=99.03  E-value=2.7e-09  Score=99.36  Aligned_cols=132  Identities=17%  Similarity=0.204  Sum_probs=103.3

Q ss_pred             HhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy17194        316 LPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDV  395 (871)
Q Consensus       316 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~  395 (871)
                      +.+.++..++.++.+++.||+|||+.+  ..+.....++.+.....++.+...+..++.+++.+...+......   .+.
T Consensus         5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~   79 (141)
T TIGR00880         5 AGYALGQLIYSPLSGLLTDRFGRKPVL--LVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALI---ADI   79 (141)
T ss_pred             EeehhHHHHHHhhHHHHHhhcchhHHH--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHH---HHH
Confidence            345677888999999999999999855  556666666666666667788777788888888877644444443   344


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHH
Q psy17194        396 RYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       396 ~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      .++++|++++++.+....+|..++|.+.+.+.+..+|++.+++.+.+.++..+..++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (141)
T TIGR00880        80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF  136 (141)
T ss_pred             CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence            555899999999999999999999999999999999999998887776666555443

>KOG3098|consensus

Probab=99.01  E-value=1.4e-07  Score=102.82  Aligned_cols=307  Identities=14%  Similarity=0.135  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh
Q psy17194        111 FASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       111 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~  190 (871)
                      .++-.....++.++.+.+.|+.|.|..|+++...+..-.+.+-+ .|-+.+++...+.|+|.+..+..--.++.+.. ++
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~s-t~  133 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNS-TR  133 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcC-Ch
Confidence            56667777788889999999999999999999998877766655 45677888999999999999999899999974 67


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh--------CCh-h----------HHHHHHHHHHHHHH--HHHHhcccc
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALYQFA--------GKE-I----------PFLILAFVSLLDGF--MLLLVMKPV  249 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~--------gwr-~----------~f~~~~~~~l~~~i--~~~~~~~~~  249 (871)
                      |++.+..++.-+....+.++|..+-..+....        +-+ .          ...+.+++..+..+  ....+.|..
T Consensus       134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~  213 (461)
T KOG3098|consen  134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK  213 (461)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence            89999999999999999988876654432211        111 0          11111111111111  111111211


Q ss_pred             hhhhccCCCC---CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hCCCch-hHHHHHHhhHHhHH
Q psy17194        250 KEQLNQKKPE---SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDN--LTTDNW-KIGMIWLPAFFPHV  323 (871)
Q Consensus       250 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~s~~-~~g~~~~~~~~~~~  323 (871)
                      ......+..+   .+......+++++++...+....+..++.........|..+.-.  .+.+.. ..+......+++.+
T Consensus       214 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v  293 (461)
T KOG3098|consen  214 DVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEV  293 (461)
T ss_pred             chhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHH
Confidence            1111111110   01112334567788888877777766666666666666554322  222222 22333344456666


Q ss_pred             HHHHHHHHHHhh---cCchhHHHHHHHHHHHHHHHHHhhcc------------------hhhHHHHHHHHHHHHHHhhhh
Q psy17194        324 FGVVITVKLAKL---YPTYQWLMVAVGLVLEGLCCFIIPFS------------------TSYQMLMLPICGICFGMALVD  382 (871)
Q Consensus       324 ~~~~~~g~l~dr---~g~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~~~l~g~g~~~~~  382 (871)
                      ++....+.+.+|   +|+++..  .++..+..++.++....                  ++.....+..++.|++-+...
T Consensus       294 ~~g~~~~~l~~rir~fg~~~~~--~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~  371 (461)
T KOG3098|consen  294 IGGLDFSILSKRIRGFGRKPTV--LIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFN  371 (461)
T ss_pred             HHHHHHHHHhhhhhhcccCcch--hHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHH
Confidence            666666666655   5766643  44444444444443221                  123344455566677766653


Q ss_pred             hhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        383 TALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGG  425 (871)
Q Consensus       383 ~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~  425 (871)
                      ......    .....+++|..+.++...-..++..++-.....
T Consensus       372 t~~~~i----i~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~  410 (461)
T KOG3098|consen  372 TQRYVI----IALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY  410 (461)
T ss_pred             HHHHHH----HHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            333333    333345788888888888777777766555543

>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1

Probab=99.01  E-value=2.4e-06  Score=93.55  Aligned_cols=345  Identities=17%  Similarity=0.112  Sum_probs=204.5

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPF  124 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~  124 (871)
                      ...+..+.++...+.-+.....|.++.+..-                          .+-.-.+...-.-.+..+++++.
T Consensus         4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p--------------------------~sLl~~siygl~~~~~~~~f~~~   57 (432)
T PF06963_consen    4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFP--------------------------GSLLPVSIYGLVRSLSAILFGPW   57 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------------------CCcHHHHHHHHHHHHHHHHhhHH
Confidence            3456777787777777777777888777521                          13344455555566777888999


Q ss_pred             hhHhhhhhCCchHHHHHHHHHHHHHHHHHh------h--h-------hHHHHHHHHHHHHhhhhhhhh-hHHHHhhccc-
Q psy17194        125 SGALIDRIGYDLPMMIGLCIMFLSTALFAC------G--R-------SYGVLFFARSLQGVGSAFADT-SGLAMIADRF-  187 (871)
Q Consensus       125 ~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~------a--~-------s~~~l~~~r~l~G~~~g~~~~-~~~a~i~~~~-  187 (871)
                      .|.+.||..|++++..+++..-++..+...      .  +       ....+++.-.+.|.-.-.... ...++=.||+ 
T Consensus        58 vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVv  137 (432)
T PF06963_consen   58 VGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVV  137 (432)
T ss_pred             HHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhh
Confidence            999999999999887776555444333221      1  1       112222222233322222211 1122222331 


Q ss_pred             ----CChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhccc----chh---hhccC
Q psy17194        188 ----TEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKP----VKE---QLNQK  256 (871)
Q Consensus       188 ----~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~----~~~---~~~~~  256 (871)
                          .+++.+.+.++...-.--+.-+++|++.|.+....+.+....+.++..++..++=++++..    .|+   +++++
T Consensus       138 vi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~  217 (432)
T PF06963_consen  138 VIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSS  217 (432)
T ss_pred             hhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCc
Confidence                1345677888888888888999999999999998898888888888877777665554421    111   10000


Q ss_pred             C---C--CC-----C---------------cccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhH
Q psy17194        257 K---P--ES-----H---------------STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKI  311 (871)
Q Consensus       257 ~---~--~~-----~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~  311 (871)
                      +   .  .+     +               ....++..++++.+...+...++... ...+......|+... |+++..+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~i  295 (432)
T PF06963_consen  218 ESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVI  295 (432)
T ss_pred             cccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHH
Confidence            0   0  00     0               01123445566655554444444333 334566777788776 9999999


Q ss_pred             HHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH------Hhhcch----hhHHHHHHHHHHHHHHhhh
Q psy17194        312 GMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF------IIPFST----SYQMLMLPICGICFGMALV  381 (871)
Q Consensus       312 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~~l~~~~~l~g~g~~~~  381 (871)
                      |..-+...+.++.+.++..++.+|+|..|.-  ..++.....++.      ...-.+    +...++.+.++.-+|.=..
T Consensus       296 gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G--~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~f  373 (432)
T PF06963_consen  296 GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAG--LWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSF  373 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcchhhH--HHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999999988733  344332222222      221111    2223333444444443333


Q ss_pred             hhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHH
Q psy17194        382 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  422 (871)
Q Consensus       382 ~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l  422 (871)
                      .-...-.++   +..|+++||...|+-+...++...+--.+
T Consensus       374 DL~~~qi~Q---e~V~~~~Rg~v~gvq~sl~~lf~ll~~~~  411 (432)
T PF06963_consen  374 DLAVTQIMQ---ENVPESERGAVSGVQNSLQSLFELLSFVL  411 (432)
T ss_pred             hHHHHHhhc---ccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence            222222333   33466999999999988887766554433

It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane

>KOG0637|consensus

Probab=98.94  E-value=9.8e-09  Score=108.45  Aligned_cols=358  Identities=14%  Similarity=0.114  Sum_probs=205.3

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      +.++.++...+-..+.+..-....+++.++.|+                           +....+.+--+..+...+.+
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~lGv---------------------------phk~~S~iw~~gPi~G~~vQ   84 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQSLGV---------------------------PHKWSSIIWLCGPLSGLLVQ   84 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHHcCC---------------------------Ccccccccccccccccceec
Confidence            444455555555556666667888999999887                           45666777778888889999


Q ss_pred             hhhhHhhhh----hCCchHHH-HHHHHHHHHHHHHHhhhhHH-----------------HHHHHHHHHHhhhhhhhhhHH
Q psy17194        123 PFSGALIDR----IGYDLPMM-IGLCIMFLSTALFACGRSYG-----------------VLFFARSLQGVGSAFADTSGL  180 (871)
Q Consensus       123 ~~~G~l~Dr----~Grr~~l~-~~~~~~~i~~~l~~~a~s~~-----------------~l~~~r~l~G~~~g~~~~~~~  180 (871)
                      |+.|..+||    |||||..+ .+.++.+++.++..++.++.                 .++++-.+.-++.-.....+.
T Consensus        85 P~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r  164 (498)
T KOG0637|consen   85 PLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR  164 (498)
T ss_pred             ccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH
Confidence            999999996    88877654 56677777888887775443                 444555566666767777889


Q ss_pred             HHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCCh--hHHHHHHHHHHHHHHHHHHhcccc---------
Q psy17194        181 AMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKE--IPFLILAFVSLLDGFMLLLVMKPV---------  249 (871)
Q Consensus       181 a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr--~~f~~~~~~~l~~~i~~~~~~~~~---------  249 (871)
                      +++.|+..+++++-++++++.....+|..+|..+++++    +|+  .+|...-.+.+.+..+-..+..+.         
T Consensus       165 a~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~  240 (498)
T KOG0637|consen  165 ALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSE  240 (498)
T ss_pred             HHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheeccc
Confidence            99999986654444499999999999999999888743    443  333333333333322222221110         


Q ss_pred             -------hhhhccC--CCCCCccc----chhhhhc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhCCCchh---
Q psy17194        250 -------KEQLNQK--KPESHSTV----PIWKLFM--DPYIAVCSGALLMANVALAFLEPTISLWIED-NLTTDNWK---  310 (871)
Q Consensus       250 -------~~~~~~~--~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~~---  310 (871)
                             ++...+.  .+.+....    .....++  .+..+.+++...+..++...+.-+...++-+ .|+-++..   
T Consensus       241 ~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~  320 (498)
T KOG0637|consen  241 SLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADEN  320 (498)
T ss_pred             ccccccccCCCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcc
Confidence                   0000000  00000000    1111222  3556667777777776666666666665533 34433211   


Q ss_pred             -------------HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q psy17194        311 -------------IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFG  377 (871)
Q Consensus       311 -------------~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g  377 (871)
                                   -.|-+..+.+...+.+....++.+|+|.|+++  ..+...+.++..+.+...+.+....-+...|+-
T Consensus       321 S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y--~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~  398 (498)
T KOG0637|consen  321 SEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRY--WGGVNAFGLATGLAGLVLNTYVVLSHRSTAGIL  398 (498)
T ss_pred             hhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEE--eehhHHHHHHHHHHhhhhhHHHHHHHHhhccee
Confidence                         12334456666777788889999999955533  223332334443344334433333222222211


Q ss_pred             Hhhhhhhhhhhhhh---------------------hhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhh
Q psy17194        378 MALVDTALLPTLGY---------------------LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTA  434 (871)
Q Consensus       378 ~~~~~~~~~~~~~~---------------------~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~  434 (871)
                      .+.....-......                     ..+. ...-+|...|+.+....+...+.....|.+.+..|-..
T Consensus       399 ~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~-sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~  475 (498)
T KOG0637|consen  399 SSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGN-SGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN  475 (498)
T ss_pred             ecchhcccHHHHHHHHHhCCccccccccccccccccccC-ccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence            11110100111100                     0011 11223777788888888888888888888888887443

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.94  E-value=1.5e-05  Score=88.54  Aligned_cols=237  Identities=9%  Similarity=-0.027  Sum_probs=151.7

Q ss_pred             chhHHHHHHHHHHHHHHHh-hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh----h---------------------
Q psy17194        103 EDSATGVLFASKAIVQLMV-NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG----R---------------------  156 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a----~---------------------  156 (871)
                      +...+.++.+...+...+. .++.+++++|++|++++-.....+.....++++.    +                     
T Consensus        41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~  120 (472)
T TIGR00769        41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM  120 (472)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence            4467889998888877766 8999999999999999888777777777666654    1                     


Q ss_pred             ------hHHHHHHHHHHHHhhhhhhhh-hHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh-------h
Q psy17194        157 ------SYGVLFFARSLQGVGSAFADT-SGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQF-------A  222 (871)
Q Consensus       157 ------s~~~l~~~r~l~G~~~g~~~~-~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~-------~  222 (871)
                            +.|...+..+...+-...... ...++++|.+ ..+|-.|..+++..+.++|.++|+.+..++.+.       .
T Consensus       121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~-t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~  199 (472)
T TIGR00769       121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT-TIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGV  199 (472)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Confidence                  133344455556665555555 7788999986 567899999999999999999999998887732       1


Q ss_pred             -CCh----hHHHHHHHHHHHHHHHHHHhcccchhhhc-----cCCCCCCc----ccchhhhhcchhHHHHHHHHHHHHHH
Q psy17194        223 -GKE----IPFLILAFVSLLDGFMLLLVMKPVKEQLN-----QKKPESHS----TVPIWKLFMDPYIAVCSGALLMANVA  288 (871)
Q Consensus       223 -gwr----~~f~~~~~~~l~~~i~~~~~~~~~~~~~~-----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (871)
                       .|.    ..+.+.++.+++...+..++-+....+.+     +++++++.    ....+.++++|.++.++....+.+..
T Consensus       200 ~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~  279 (472)
T TIGR00769       200 DGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGIS  279 (472)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence             232    23334343333333333332221111100     01111111    23455678889888888777777777


Q ss_pred             HHHHHHHHHHHHHHhhCCCchhH----HHHHHhhHHhHHHHHHHHHHHHhhcCchhH
Q psy17194        289 LAFLEPTISLWIEDNLTTDNWKI----GMIWLPAFFPHVFGVVITVKLAKLYPTYQW  341 (871)
Q Consensus       289 ~~~~~~~~~~~l~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~  341 (871)
                      ...+....-..+++.+. ++.+.    |......++..++.+++.+++.+|+|-+..
T Consensus       280 ~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~  335 (472)
T TIGR00769       280 INLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTA  335 (472)
T ss_pred             HHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            66666655555666553 33222    333344455555667777999999986643

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG3574|consensus

Probab=98.87  E-value=2.2e-07  Score=95.35  Aligned_cols=360  Identities=12%  Similarity=0.062  Sum_probs=212.1

Q ss_pred             chhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         42 KLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      +..+..+.+.+.+.+.-.+... .+|.+.+.-|.                           |.++.+...-++ ..+ ..
T Consensus        30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~v---------------------------Syt~~a~fS~ay-~P~-sL   79 (510)
T KOG3574|consen   30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGV---------------------------SYTSQAIFSFAY-WPF-SL   79 (510)
T ss_pred             hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCc---------------------------chhhhhhhhhhh-hHH-HH
Confidence            3455566677788888888887 88999886544                           556655443222 121 23


Q ss_pred             hhhhhHhhh-----hhCCchHHHH-HHHHHHHHHHHHHhh-----------hhHHHHHHHHHHHHhhhhhhhhhHHHHhh
Q psy17194        122 NPFSGALID-----RIGYDLPMMI-GLCIMFLSTALFACG-----------RSYGVLFFARSLQGVGSAFADTSGLAMIA  184 (871)
Q Consensus       122 ~~~~G~l~D-----r~Grr~~l~~-~~~~~~i~~~l~~~a-----------~s~~~l~~~r~l~G~~~g~~~~~~~a~i~  184 (871)
                      -++|.++.|     |+||||..++ +..+.+....+.+..           ++...+....++.-+..+....+...+.-
T Consensus        80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwAL  159 (510)
T KOG3574|consen   80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWAL  159 (510)
T ss_pred             HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHH
Confidence            467888999     9999997665 444444444333321           34445555667777888888888888888


Q ss_pred             cccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----h--hCCh---------hHHHHHHHHHHHHHHHHHHhccc
Q psy17194        185 DRFTEENERSQALGIALAFISFGCLVAPPFGGALYQ-----F--AGKE---------IPFLILAFVSLLDGFMLLLVMKP  248 (871)
Q Consensus       185 ~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~-----~--~gwr---------~~f~~~~~~~l~~~i~~~~~~~~  248 (871)
                      .+. .+++.|-+..-...+.++|..+|..+--.+..     .  .+|.         .-.++.+.+.++...+..+..+|
T Consensus       160 tmL-s~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke  238 (510)
T KOG3574|consen  160 TML-SRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKE  238 (510)
T ss_pred             Hhc-CHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence            887 45678877777777777777766544322211     1  1222         22444555666666666665555


Q ss_pred             chhhhccCCC--CCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHH
Q psy17194        249 VKEQLNQKKP--ESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGV  326 (871)
Q Consensus       249 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~  326 (871)
                      .++...++..  .+...+-.+++++-|.+..+++.....-.++..-....+.-+.| .|++..+.+++.....-..++..
T Consensus       239 ~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~  317 (510)
T KOG3574|consen  239 NDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALP  317 (510)
T ss_pred             CchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhh
Confidence            4433221111  11112234566677777777776666667777777666766655 69998887776644444444455


Q ss_pred             HHHHHHHhhcCchhHHH------HHHHHHHHHHHH-HHhh-cch-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy17194        327 VITVKLAKLYPTYQWLM------VAVGLVLEGLCC-FIIP-FST-----SYQMLMLPICGICFGMALVDTALLPTLGYLV  393 (871)
Q Consensus       327 ~~~g~l~dr~g~~~~~~------~~~~~~~~~~~~-~~~~-~~~-----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~  393 (871)
                      ...|++...  .|++..      +-+........+ .... +..     .....++..+...+...+....+.+.++...
T Consensus       318 ~~~gk~ta~--~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~a  395 (510)
T KOG3574|consen  318 LYIGKWTAG--PRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHA  395 (510)
T ss_pred             hhheeecCC--CCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence            554544432  111100      111111111111 1111 111     1122233344455666666555666666666


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhH
Q psy17194        394 DVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTAL  435 (871)
Q Consensus       394 ~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~  435 (871)
                      ...+|..-|+.+.+.|+..++|+-.-..+..++.|.++++-.
T Consensus       396 qisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C  437 (510)
T KOG3574|consen  396 QISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC  437 (510)
T ss_pred             hcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence            666778999999999999999998888888888888776543

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.75  E-value=1.5e-06  Score=87.85  Aligned_cols=146  Identities=19%  Similarity=0.268  Sum_probs=111.3

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHhhhh
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG-------RSYGVLFFARSLQGVGSA  173 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a-------~s~~~l~~~r~l~G~~~g  173 (871)
                      +.|.+|...+..+..+|..+ +++.|.+.|++|++.++.+|.+...+|..+..++       .++|.+.+..++.|.+.+
T Consensus        33 ~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~  111 (250)
T PF06813_consen   33 GYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSC  111 (250)
T ss_pred             CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHH
Confidence            44899999999999999876 5889999999999999999999999998887654       467888888889999888


Q ss_pred             hhhhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccch
Q psy17194        174 FADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVK  250 (871)
Q Consensus       174 ~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~  250 (871)
                      ....++.....+.| | ++||++.|+.-...+++..+-..+...+.+. +-..-+++.+....+..++..++.++.+
T Consensus       112 ~~~ta~lvt~~~NF-P-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~~v~l~~~~~vr~~~  185 (250)
T PF06813_consen  112 WFNTASLVTCVRNF-P-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPAVVCLVAMFFVRPVP  185 (250)
T ss_pred             HhhhHHHHHHHHhC-c-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHhhheeccC
Confidence            88777777777778 5 5899999999999999988877666665554 3233334444444443444444444433

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=98.73  E-value=4.6e-06  Score=88.98  Aligned_cols=161  Identities=27%  Similarity=0.376  Sum_probs=129.1

Q ss_pred             HHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCch--hHHHHHHHHHHHHHHHhhhhhh
Q psy17194         49 STALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGED--SATGVLFASKAIVQLMVNPFSG  126 (871)
Q Consensus        49 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~~~~~~~G  126 (871)
                      ....+....+.....+..+.+..+++.                           +.  .+.++..+.+.++..++.++.|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~g   60 (338)
T COG0477           8 ALAALLLGLDLGLLSPALPLLLSTLSL---------------------------SSGRLLYGLLLSAFFLGYAIGSLLAG   60 (338)
T ss_pred             HHHHHHHHHhcchHHHHHHHHHHHcCC---------------------------CchhHHHHHHHHHHHHHHHHHhhhhh
Confidence            333444446666666777888777643                           33  5789999999999999999999


Q ss_pred             HhhhhhCCchHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh-hhHHHHHHHHHH-
Q psy17194        127 ALIDRIGYDLPMMIGLCIMFLSTALFACGRS--YGVLFFARSLQGVGSAFADTSGLAMIADRFTEE-NERSQALGIALA-  202 (871)
Q Consensus       127 ~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s--~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~-~~r~~~~g~~~~-  202 (871)
                      .++||+|||+.+..+.....++.+++++..+  .+.+++.|+++|++.+...+...+++.+++ |+ ++|+...+.... 
T Consensus        61 ~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  139 (338)
T COG0477          61 PLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWF-PEATERGLAVGLVTLG  139 (338)
T ss_pred             hccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc-CchhHHHHHHHHHHHH
Confidence            9999999998888888776666677777766  899999999999999999999999999986 54 478999999888 


Q ss_pred             HHHHHHHHhHHHHHHHHhh--hCChhHHHHHHHHHHH
Q psy17194        203 FISFGCLVAPPFGGALYQF--AGKEIPFLILAFVSLL  237 (871)
Q Consensus       203 ~~~~G~~lg~~l~~~l~~~--~gwr~~f~~~~~~~l~  237 (871)
                      ...+|..+++.+++.+...  .+||..|.+.......
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (338)
T COG0477         140 AGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL  176 (338)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            6888999999888777654  5799977776666544

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=98.71  E-value=1.5e-05  Score=85.84  Aligned_cols=307  Identities=12%  Similarity=0.061  Sum_probs=175.9

Q ss_pred             HHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcc
Q psy17194        107 TGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADR  186 (871)
Q Consensus       107 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~  186 (871)
                      .|.+.-+..+...+..+.+-++.+|+..+.=+.++.++.+++.++.+++++.+.=+++-++.+++.|.......++... 
T Consensus        61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~~-  139 (402)
T PF02487_consen   61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTHF-  139 (402)
T ss_pred             chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHHh-
Confidence            4556666777777888888889999887666667777888999999999999999999999999999998888887665 


Q ss_pred             cCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhCC--hhHHHHHHHHHHHHHHHHHHhcccchhhhccCC------C
Q psy17194        187 FTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGK--EIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK------P  258 (871)
Q Consensus       187 ~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~gw--r~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~------~  258 (871)
                      + ++    ...+.+..+.+.+.++|+..-..+.+ .|+  |..+++...+.++..+..++.+++++.+....+      .
T Consensus       140 y-~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~  213 (402)
T PF02487_consen  140 Y-GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA  213 (402)
T ss_pred             c-Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc
Confidence            5 32    35788888888888888877666665 565  777888777776655555555554322110000      0


Q ss_pred             CC----------Cc----ccchhhhhc-chhHHHHHHHHHHHHHHHHHHH-HHHHHHH-HHhhCCCchhHHHHHHhhHHh
Q psy17194        259 ES----------HS----TVPIWKLFM-DPYIAVCSGALLMANVALAFLE-PTISLWI-EDNLTTDNWKIGMIWLPAFFP  321 (871)
Q Consensus       259 ~~----------~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l-~~~~g~s~~~~g~~~~~~~~~  321 (871)
                      ++          +.    ....++-++ -+.+....+-.+...+..+.++ ...+... .........+..+....+.+|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~G  293 (402)
T PF02487_consen  214 EDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLG  293 (402)
T ss_pred             cccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHH
Confidence            00          00    001111111 1111112222222222322222 1122211 111111122334444455555


Q ss_pred             HHHHHHHHHHHHhhcCchhHHHHHHHHHHHH---HHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy17194        322 HVFGVVITVKLAKLYPTYQWLMVAVGLVLEG---LCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYV  398 (871)
Q Consensus       322 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~  398 (871)
                      ..+++--.    .-+.-|++.+..+.-.+-.   +.-..+.+.++.|..++..+..|+..|..+   ......+.+..++
T Consensus       294 VFISRSS~----~~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~Y---VNtF~~I~~~~~~  366 (402)
T PF02487_consen  294 VFISRSSL----PFFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASY---VNTFYRISEEVPP  366 (402)
T ss_pred             Hhhhhcce----eeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHH---HHHHHHHHhcCCH
Confidence            44443221    1122233332111111111   111222345677777666666777777763   3334444555677


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        399 SVYGSIYAIADISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       399 ~~rg~a~gi~~~~~~lg~~igp~l~g~l~  427 (871)
                      ++|..++|.......+|..++..++-++-
T Consensus       367 ~~REFslg~vsvsds~GI~lAgll~l~le  395 (402)
T PF02487_consen  367 EDREFSLGAVSVSDSLGILLAGLLGLPLE  395 (402)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            99999999999988888888877765543

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.70  E-value=5e-06  Score=96.66  Aligned_cols=145  Identities=17%  Similarity=0.157  Sum_probs=118.9

Q ss_pred             cCchhHHHHHHHHHHHHHHHhhhhhhHhhhh-hCCchHHHHHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHhh
Q psy17194        101 EGEDSATGVLFASKAIVQLMVNPFSGALIDR-IGYDLPMMIGLCIMFLSTALFACGRS--------YGVLFFARSLQGVG  171 (871)
Q Consensus       101 ~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~s--------~~~l~~~r~l~G~~  171 (871)
                      +.+.+....+...+....-+...++|.++|+ +||++.+.++.++..++..+.+++..        ...++++-.+..+|
T Consensus        19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G   98 (654)
T TIGR00926        19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG   98 (654)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh
Confidence            4477788888888888888899999999997 69999999999999999988876421        23456677888899


Q ss_pred             hhhhhhhHHHHhhcccCCh--hhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhh-------CChhHHHHHHHHHHHHHHHH
Q psy17194        172 SAFADTSGLAMIADRFTEE--NERSQALGIALAFISFGCLVAPPFGGALYQFA-------GKEIPFLILAFVSLLDGFML  242 (871)
Q Consensus       172 ~g~~~~~~~a~i~~~~~~~--~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~-------gwr~~f~~~~~~~l~~~i~~  242 (871)
                      .|.+-|+..+...|.+.++  ++|-+.+.++..+.++|.++++++.+++.+..       +|...|.+.+++.++..++.
T Consensus        99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf  178 (654)
T TIGR00926        99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVF  178 (654)
T ss_pred             ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998543  24788999999999999999999999887543       69999999998888776665


Q ss_pred             HHh
Q psy17194        243 LLV  245 (871)
Q Consensus       243 ~~~  245 (871)
                      ...
T Consensus       179 ~~g  181 (654)
T TIGR00926       179 MAG  181 (654)
T ss_pred             HHh
Confidence            443

>KOG4332|consensus

Probab=98.54  E-value=2.8e-06  Score=83.08  Aligned_cols=331  Identities=12%  Similarity=0.081  Sum_probs=164.4

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHH
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAM  182 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~  182 (871)
                      ...++|.++-+..-..+++..+.|-++|+-|||+.-+.-++.+.+++ +.-.++++-.++++|++-|++.+....+.-++
T Consensus        70 gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsW  148 (454)
T KOG4332|consen   70 GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAFESW  148 (454)
T ss_pred             cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHHHHH
Confidence            56788888888888888899999999999999996655444444443 23356789999999999999999998888776


Q ss_pred             hhcccCChhhHHHHHHHHH--------HHHHHHHHHhHHHHHHHHhhh--CChhHHHHHHHHHHHHHHHHHHhcccchhh
Q psy17194        183 IADRFTEENERSQALGIAL--------AFISFGCLVAPPFGGALYQFA--GKEIPFLILAFVSLLDGFMLLLVMKPVKEQ  252 (871)
Q Consensus       183 i~~~~~~~~~r~~~~g~~~--------~~~~~G~~lg~~l~~~l~~~~--gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~  252 (871)
                      ...-- . ++|+.---+..        .++.+-.+++.+.+-.+.+.+  |--.+|-..+....+...+   .+..-.|+
T Consensus       149 liaEH-n-ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAv---il~~W~EN  223 (454)
T KOG4332|consen  149 LIAEH-N-EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAV---ILSSWSEN  223 (454)
T ss_pred             HHHHh-h-hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHH---HHhhhhhc
Confidence            54322 2 34443222222        223333444555555566554  3445554433222222222   22221222


Q ss_pred             hccCCCCCC----cccchhhhhcchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCch--hHHHHHHhhHHhHHHH
Q psy17194        253 LNQKKPESH----STVPIWKLFMDPYIAVCSGALLMANVALAFL-EPTISLWIEDNLTTDNW--KIGMIWLPAFFPHVFG  325 (871)
Q Consensus       253 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~g~s~~--~~g~~~~~~~~~~~~~  325 (871)
                      ..+..+.+.    -....+.+..++++.++-.+..+.-...+.+ .-|.|.     +.-++.  --|.+++.+.++.++|
T Consensus       224 ygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPa-----Lspn~e~iPhGfiFatFMlASmLG  298 (454)
T KOG4332|consen  224 YGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPA-----LSPNDEEIPHGFIFATFMLASMLG  298 (454)
T ss_pred             cCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeeccc-----CCCCcccCCchhHHHHHHHHHHHh
Confidence            111111110    1112233444555544443333322222221 112221     111122  2478888888888888


Q ss_pred             HHHHHHHHhhcCchhHHHHHHHHHHH--HH--HHHHhhcchh---hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cc
Q psy17194        326 VVITVKLAKLYPTYQWLMVAVGLVLE--GL--CCFIIPFSTS---YQMLMLPICGICFGMALVDTALLPTLGYLVDV-RY  397 (871)
Q Consensus       326 ~~~~g~l~dr~g~~~~~~~~~~~~~~--~~--~~~~~~~~~~---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~-~~  397 (871)
                      +-+..++..|-..|---.+.+.+...  ++  ..+....+++   ...-+++.+++-.+.|..    .|.+..+-.. .|
T Consensus       299 SSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlf----wPSimkmRsqyIP  374 (454)
T KOG4332|consen  299 SSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLF----WPSIMKMRSQYIP  374 (454)
T ss_pred             hHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhc----chHHHHHHHhhCC
Confidence            88888877765433210111111111  11  1111112222   222233444444555554    3444333332 35


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH
Q psy17194        398 VSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       398 ~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~  448 (871)
                      .+.|++.+-.+..--++-..++-..--.-....+-+..|-++.....+..+
T Consensus       375 EearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i  425 (454)
T KOG4332|consen  375 EEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI  425 (454)
T ss_pred             HHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence            578887776654433332222111100000012455677777666555543

>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors)

Probab=98.46  E-value=1.8e-05  Score=92.19  Aligned_cols=164  Identities=10%  Similarity=0.077  Sum_probs=118.7

Q ss_pred             HHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHHHHhhcchh-----
Q psy17194        290 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQWLMVAVGLVLEGLCCFIIPFSTS-----  363 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~-----  363 (871)
                      +++...+..|+.+.+|++...+..+...+....-+..+++|+++|++ |+++.+  ..+.++..++..+..+...     
T Consensus         4 YGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI--l~~~ii~~lG~~llai~a~~~~~~   81 (654)
T TIGR00926         4 YGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI--LYLSIVYVVGHALLSFGAIPSSGH   81 (654)
T ss_pred             eecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH--HHHHHHHHHHHHHHHhccCccccc
Confidence            44556677788888999998888888888888888899999999985 777744  5566666666665544311     


Q ss_pred             ---hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-------Chh
Q psy17194        364 ---YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-------GFT  433 (871)
Q Consensus       364 ---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-------g~~  433 (871)
                         ....++++.+..+|.|..-+...+...+..+...++++-+.+.++..+.++|+.+++.+.+++.+..       +|.
T Consensus        82 ~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~  161 (654)
T TIGR00926        82 PLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYP  161 (654)
T ss_pred             chHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchH
Confidence               1234566677788888876666666655544322345778899999999999999999999998553       588


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhh
Q psy17194        434 ALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       434 ~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      ..|.+.+++.+++.++....++
T Consensus       162 ~aF~i~~i~m~ia~lvf~~g~k  183 (654)
T TIGR00926       162 LAFGVPAILMILALIVFMAGSK  183 (654)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc
Confidence            8998888887777666554443

>KOG0637|consensus

Probab=98.40  E-value=5.2e-06  Score=88.26  Aligned_cols=150  Identities=13%  Similarity=0.172  Sum_probs=99.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh----cCchhHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL----YPTYQWLMVAVGL  348 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~  348 (871)
                      +....+....+-..+++..-.++.++|+++ .|.+....+.++...-+...+.+++.|..+||    +||||.++ ..+.
T Consensus        32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI-~~~s  109 (498)
T KOG0637|consen   32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFI-LAGS  109 (498)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchH-HHhh
Confidence            445555566666677777778888998876 69999999999888888889999999999996    68888753 4455


Q ss_pred             HHHHHHHHHhhcchhhHHHH----------HHHHHHHHHHhhh----hhhhhhhhhhhhccccccchhh-HHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQMLM----------LPICGICFGMALV----DTALLPTLGYLVDVRYVSVYGS-IYAIADISYS  413 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~l~----------~~~~l~g~g~~~~----~~~~~~~~~~~~~~~~~~~rg~-a~gi~~~~~~  413 (871)
                      ...++++++++++.++...+          ....+..+|.-+.    .....|.=+++.|...++++-+ +++.+.....
T Consensus       110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~a  189 (498)
T KOG0637|consen  110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMA  189 (498)
T ss_pred             HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHH
Confidence            56667777777665432211          1112222222221    1223344444555443344444 9999999999


Q ss_pred             HHHHHHHHHHH
Q psy17194        414 LAYAIGPIVAG  424 (871)
Q Consensus       414 lg~~igp~l~g  424 (871)
                      +|+.+|-.+++
T Consensus       190 vGnvLGY~~g~  200 (498)
T KOG0637|consen  190 VGNVLGYALGS  200 (498)
T ss_pred             hcceeeeeccc
Confidence            99988877766

>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age

Probab=98.38  E-value=0.0003  Score=75.89  Aligned_cols=132  Identities=14%  Similarity=0.194  Sum_probs=87.2

Q ss_pred             HHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy17194        312 GMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGY  391 (871)
Q Consensus       312 g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~  391 (871)
                      +.+..+..+...+..++..+..+|.+-+...  .....+..+++++.+++++.+.-+++.++.+++.|.....+..... 
T Consensus        62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri--~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-  138 (402)
T PF02487_consen   62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRI--LICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-  138 (402)
T ss_pred             hHHHHHHHHHHHHHHHHhHhhhhhccchHHH--HHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence            4455556677777788888999998754433  4455567778888888888888888888888887776444444332 


Q ss_pred             hhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--hhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        392 LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--FTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       392 ~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                         .++ +   ...+-+..+.+.++.+|+...-.+.+ .|  .+..+.+...+.++..+.++++.
T Consensus       139 ---~y~-~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L  195 (402)
T PF02487_consen  139 ---FYG-K---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLL  195 (402)
T ss_pred             ---hcC-c---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence               222 2   34566667777788888887766666 55  46666666655554444444443

The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane

>TIGR00769 AAA ADP/ATP carrier protein family

Probab=98.36  E-value=0.0033  Score=70.14  Aligned_cols=147  Identities=12%  Similarity=0.053  Sum_probs=80.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----CchhHHHHHHhhHHhHHHH-HHHHHHHHhhcCchhHHHHHHH
Q psy17194        274 YIAVCSGALLMANVALAFLEPTISLWIEDNLTT-----DNWKIGMIWLPAFFPHVFG-VVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-----s~~~~g~~~~~~~~~~~~~-~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      .+....+..++..+.+...     --++|.+..     +.+...++.+...+...+. .++.+++++|++|++++.....
T Consensus         8 k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~   82 (472)
T TIGR00769         8 KFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS   82 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence            3444444444444433332     225776655     3356777777666655555 7889999999999986644333


Q ss_pred             HHHHHHHHHHh---hcchh--------------------------hHHHHHHHHHHH-HHHhhhhhhhhhhhhhhhcccc
Q psy17194        348 LVLEGLCCFII---PFSTS--------------------------YQMLMLPICGIC-FGMALVDTALLPTLGYLVDVRY  397 (871)
Q Consensus       348 ~~~~~~~~~~~---~~~~~--------------------------~~~l~~~~~l~g-~g~~~~~~~~~~~~~~~~~~~~  397 (871)
                      ..+.....+..   +..+.                          .|...+..+..- .+.-...-...+.   ..|...
T Consensus        83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~f---andi~t  159 (472)
T TIGR00769        83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGF---ANQITT  159 (472)
T ss_pred             HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH---HHhcCC
Confidence            33222222221   11111                          111111111111 1111111123333   344445


Q ss_pred             ccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        398 VSVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       398 ~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      .++..+..++...+.++|..+++.+..++.+
T Consensus       160 ~~qakRfy~l~~~ganlg~i~sg~~~~~~~~  190 (472)
T TIGR00769       160 IDEAKRFYALFGLGANVALIFSGRTIKYFSK  190 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5888999999999999999999999888763

These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.

>KOG3810|consensus

Probab=98.33  E-value=4.4e-05  Score=78.09  Aligned_cols=323  Identities=13%  Similarity=0.083  Sum_probs=197.7

Q ss_pred             HHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHH
Q psy17194        118 QLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL  197 (871)
Q Consensus       118 ~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~  197 (871)
                      +.+.-.+.=.+.|..-.|++++.-.+.......+..+.++.+.+=+.-+..|...+ ...+.++++-..+ +++++.++.
T Consensus        55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~V-d~~~Yqrvt  132 (433)
T KOG3810|consen   55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKV-DPEMYKRVT  132 (433)
T ss_pred             HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeec-CHHHHHHHH
Confidence            33444455568899999999988777777778888899999999999999999877 4467788888887 568999999


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhh--CChhHHHHHHHHHHHHHHHHHHhcccchhhh----ccCC---------CCCCc
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQFA--GKEIPFLILAFVSLLDGFMLLLVMKPVKEQL----NQKK---------PESHS  262 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~~--gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~----~~~~---------~~~~~  262 (871)
                      |...++.-.|-.+|..++-.+...-  ++...=.+.-....+..+ ..+++|.+++..    .+++         ..+.+
T Consensus       133 ~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~-~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~~~~~  211 (433)
T KOG3810|consen  133 GYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVL-LALFLPRVKRSLYFHRLEDKISVGDLEEMNPQAS  211 (433)
T ss_pred             HHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHH-HHhhCCCCchhhhhhcccccceeccchhcCccch
Confidence            9999999999999999988887642  233222332222233333 334444433211    0000         00000


Q ss_pred             cc------------chhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCC-chhHHHHHHhhHHhHHHHHHHH
Q psy17194        263 TV------------PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTD-NWKIGMIWLPAFFPHVFGVVIT  329 (871)
Q Consensus       263 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~  329 (871)
                      ..            +.....+||.+....+-..+...++..+..+.....++.-.-+ ...-|..=....+.++++.+..
T Consensus       212 ~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~  291 (433)
T KOG3810|consen  212 YMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAA  291 (433)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHH
Confidence            00            1122345666554444444445555555554444333321111 1112444455567778888888


Q ss_pred             HHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHH
Q psy17194        330 VKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIAD  409 (871)
Q Consensus       330 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~  409 (871)
                      |.+.-++.|..-+++..+.+..+-..+++..++++|..+++.+++.....+..+.....   ++.....+..|..+|+..
T Consensus       292 g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~---iA~nL~~e~~gLvFGiNT  368 (433)
T KOG3810|consen  292 GYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQ---IARNLSSELFGLVFGINT  368 (433)
T ss_pred             HheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHH---HHHhhhhhhheeeeehHH
Confidence            99888777765555566667777777888888999999888888877777763333333   333333366788888776


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC-----------hhhHHHHHHHHHHHHHHH
Q psy17194        410 ISYSLAYAIGPIVAGGIVDAIG-----------FTALNFLIAFMNILYAPV  449 (871)
Q Consensus       410 ~~~~lg~~igp~l~g~l~~~~g-----------~~~~f~~~~~~~~~~~~~  449 (871)
                      +..-   ++=.++.-.+.|.-|           |..-|.+.+.+.++...+
T Consensus       369 FvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~  416 (433)
T KOG3810|consen  369 FVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGI  416 (433)
T ss_pred             HHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHH
Confidence            5433   333333333344322           345566777766666544

>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins

Probab=98.33  E-value=1.3e-05  Score=81.01  Aligned_cols=131  Identities=13%  Similarity=0.047  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc-------hhh
Q psy17194        292 LEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS-------TSY  364 (871)
Q Consensus       292 ~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~  364 (871)
                      ..+.+...+++.+|.|..+...+.....++..+| ++.|.+.|++|.+..+  .++.....++..+....       .+.
T Consensus        20 ~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l--~iG~~~~~~GY~~~~l~~~~~i~~~~~   96 (250)
T PF06813_consen   20 TFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVL--LIGAVLGFVGYGLLWLAVSGRIPSLPV   96 (250)
T ss_pred             chhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHH--HHHHHHHHHHHHHHHHHHhCccCccch
Confidence            3445556689999999999999998888888764 8889999999988755  56666666666554322       234


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        365 QMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  429 (871)
Q Consensus       365 ~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~  429 (871)
                      |.+.+..++.+.+.....   .+.+......+| ++||++.|+.-....+++++-..+...+.+.
T Consensus        97 ~~~~~~~~l~~~s~~~~~---ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~  157 (250)
T PF06813_consen   97 WLMCLFLFLGGNSSCWFN---TASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD  157 (250)
T ss_pred             HHHHHHHHHHcccHHHhh---hHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence            555444444444443331   222223334454 6899999999999999999888887777665

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=98.18  E-value=6.4e-06  Score=67.00  Aligned_cols=80  Identities=20%  Similarity=0.129  Sum_probs=72.8

Q ss_pred             HhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhHhhhhhCCc
Q psy17194         56 NMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYD  135 (871)
Q Consensus        56 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grr  135 (871)
                      ++.+..++|++|.+.+|.+.                           |.++.|++.+.+.+||.++++...++.++..++
T Consensus         5 GigRFayTplLP~M~~~~~l---------------------------s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~   57 (85)
T PF06779_consen    5 GIGRFAYTPLLPLMQADGGL---------------------------SLSQAGWLASANYLGYLVGALLASRLPRHSRPR   57 (85)
T ss_pred             hhHHHHHHhHhHHHHHhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence            55677789999999999765                           999999999999999999999999999998889


Q ss_pred             hHHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy17194        136 LPMMIGLCIMFLSTALFACGRSYGVLF  162 (871)
Q Consensus       136 ~~l~~~~~~~~i~~~l~~~a~s~~~l~  162 (871)
                      +.+..+++...+..+.+++.++++.+.
T Consensus        58 ~~~~~~l~~~~~~~~~ma~~~~~~~w~   84 (85)
T PF06779_consen   58 RLLRAGLLLTVLSTAAMALTHSFWLWS   84 (85)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence            999999999999999999998887654

Note that many members are hypothetical proteins.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=98.16  E-value=0.014  Score=65.47  Aligned_cols=238  Identities=9%  Similarity=0.022  Sum_probs=142.0

Q ss_pred             chhHHHHHHHHHHH-HHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh---------h----------------
Q psy17194        103 EDSATGVLFASKAI-VQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG---------R----------------  156 (871)
Q Consensus       103 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---------~----------------  156 (871)
                      .+..+..+-....+ ...+...+..++++|++|.+++-+....+.....++++.         +                
T Consensus        56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~  135 (491)
T PF03219_consen   56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK  135 (491)
T ss_pred             ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence            44555666554444 445567788999999999998887777766666665542         1                


Q ss_pred             ------hHHHHHHHHHHHHhhhhhhhh-hHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh---------
Q psy17194        157 ------SYGVLFFARSLQGVGSAFADT-SGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQ---------  220 (871)
Q Consensus       157 ------s~~~l~~~r~l~G~~~g~~~~-~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~---------  220 (871)
                            +.|...+..++.-+-...... .-..+..|.. +.+|-.|..+++..+.++|.++++.+..++.+         
T Consensus       136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~it-t~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~  214 (491)
T PF03219_consen  136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEIT-TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAG  214 (491)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence                  223333444444444444433 4578889985 66899999999999999999999998888877         


Q ss_pred             hhCChhHHHHH----HHHHHHHHHHHHHhcccc---hhh--hccCCCCCCc----ccchhhhhcchhHHHHHHHHHHHHH
Q psy17194        221 FAGKEIPFLIL----AFVSLLDGFMLLLVMKPV---KEQ--LNQKKPESHS----TVPIWKLFMDPYIAVCSGALLMANV  287 (871)
Q Consensus       221 ~~gwr~~f~~~----~~~~l~~~i~~~~~~~~~---~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  287 (871)
                      ...|...+...    .+.+++...+..+.-+..   ++.  ...++++++.    ....+.++|+|.+..+++.....+.
T Consensus       215 ~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi  294 (491)
T PF03219_consen  215 VDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGI  294 (491)
T ss_pred             cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            12355433222    122222121212221111   111  1111111112    2345567788888888887777777


Q ss_pred             HHHHHHHHHHHHHHHhhCCCchh---HHHHHHhhHHhHHHHHHHHHHHHhhcCchhH
Q psy17194        288 ALAFLEPTISLWIEDNLTTDNWK---IGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  341 (871)
Q Consensus       288 ~~~~~~~~~~~~l~~~~g~s~~~---~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~  341 (871)
                      ....+....-..+++.+.-+...   .|-..+..++..++..++++.+.+|+|-+..
T Consensus       295 ~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~  351 (491)
T PF03219_consen  295 SINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTA  351 (491)
T ss_pred             HHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence            77777666666666655432222   2334445566666667888999999986653

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=98.15  E-value=0.0008  Score=73.03  Aligned_cols=260  Identities=13%  Similarity=0.062  Sum_probs=139.6

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      .++.+.+++.+.-.+.....+|.++++.-                         .+.|.+|.|... .....+- .-++|
T Consensus         3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~-------------------------~~~sy~q~~~fS-la~~PfS-lKlLW   55 (544)
T PF13000_consen    3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMA-------------------------KKVSYSQQAIFS-LASYPFS-LKLLW   55 (544)
T ss_pred             eHHHHHHHHcCcccccccccchhhhcccc-------------------------CCCChhHheeee-eeechhH-HHHhh
Confidence            34556677777777776667788887711                         133667776542 2222222 23455


Q ss_pred             hHhhh-----hhCCchHHHH-HHHHHHHHHHHHHhhh------------------------hHHHHHHHHHHHHhhhhhh
Q psy17194        126 GALID-----RIGYDLPMMI-GLCIMFLSTALFACGR------------------------SYGVLFFARSLQGVGSAFA  175 (871)
Q Consensus       126 G~l~D-----r~Grr~~l~~-~~~~~~i~~~l~~~a~------------------------s~~~l~~~r~l~G~~~g~~  175 (871)
                      .++.|     |+||||..++ .-.+.++..+..+..-                        +...+....++.=+-.+..
T Consensus        56 aPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQ  135 (544)
T PF13000_consen   56 APIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQ  135 (544)
T ss_pred             hhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccC
Confidence            55555     8999998765 2333333333322111                        1112334444444555666


Q ss_pred             hhhHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHh-----hh--------C---ChhHHHHHHHHHHHHH
Q psy17194        176 DTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQ-----FA--------G---KEIPFLILAFVSLLDG  239 (871)
Q Consensus       176 ~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~-----~~--------g---wr~~f~~~~~~~l~~~  239 (871)
                      ..+...+.-...+ +++++.|..-...+.++|..++-.+--.+.+     .+        |   -..-..+.+.+.++..
T Consensus       136 DIAVDGWALT~Ls-~~n~~~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T  214 (544)
T PF13000_consen  136 DIAVDGWALTMLS-PENVGYASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVT  214 (544)
T ss_pred             CceeehhhhhhcC-hhhcchHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHH
Confidence            6677777777764 4677777766666666666666544333321     11        1   1112233455555556


Q ss_pred             HHHHHhcccchhhhc----------cCC--------CCCC-----cc-------cchhhhhcchhHHHHHHHHHHHHHHH
Q psy17194        240 FMLLLVMKPVKEQLN----------QKK--------PESH-----ST-------VPIWKLFMDPYIAVCSGALLMANVAL  289 (871)
Q Consensus       240 i~~~~~~~~~~~~~~----------~~~--------~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (871)
                      +.+.++.+|.++...          +++        ++.+     +.       ...++++|-|.+..+++.....-.++
T Consensus       215 ~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF  294 (544)
T PF13000_consen  215 ILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGF  294 (544)
T ss_pred             HHHheEeecccccccCccccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhcc
Confidence            666666665432110          000        0000     00       12345667777777777777766776


Q ss_pred             HHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHh
Q psy17194        290 AFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK  334 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d  334 (871)
                      .........-+.| .|++.++.+.+..+..-..++..+..++++.
T Consensus       295 ~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws~  338 (544)
T PF13000_consen  295 QANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWSA  338 (544)
T ss_pred             ccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc
Confidence            6666555555555 5999888877765555555555555555543

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=98.11  E-value=9.6e-05  Score=68.92  Aligned_cols=107  Identities=18%  Similarity=0.167  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh
Q psy17194        111 FASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE  190 (871)
Q Consensus       111 ~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~  190 (871)
                      .++......++.++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..+++.-.++.+. +++
T Consensus        43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~-s~~  120 (156)
T PF05978_consen   43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY-STE  120 (156)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc-CCH
Confidence            344555566667778889999999999999999988655443 557788999999999999999999999999997 578


Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGALY  219 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l~  219 (871)
                      ++|++..+++-.....+.++|.++.-.+.
T Consensus       121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~  149 (156)
T PF05978_consen  121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIF  149 (156)
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999888887765553

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>KOG1237|consensus

Probab=98.06  E-value=0.00094  Score=76.47  Aligned_cols=141  Identities=18%  Similarity=0.134  Sum_probs=111.5

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhhHhhhhh-CCchHHHHHHHHHHHHHHHHHhhhh------------------------
Q psy17194        103 EDSATGVLFASKAIVQLMVNPFSGALIDRI-GYDLPMMIGLCIMFLSTALFACGRS------------------------  157 (871)
Q Consensus       103 s~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~s------------------------  157 (871)
                      +...+.-..+.+.-......+.++.++|-| ||-+++.++.++..++..+..++..                        
T Consensus        71 ~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~  150 (571)
T KOG1237|consen   71 SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKL  150 (571)
T ss_pred             chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchH
Confidence            556777777778777888889999999975 8999999999998888665543311                        


Q ss_pred             -HHHHHHHHHHHHhhhhhhhhhHHHHhhcccC---ChhhHH--HHHHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHH
Q psy17194        158 -YGVLFFARSLQGVGSAFADTSGLAMIADRFT---EENERS--QALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLIL  231 (871)
Q Consensus       158 -~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~---~~~~r~--~~~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~  231 (871)
                       ...++.+.-+..+|.|..-+...+.-+|.+.   |++++.  ..+.++....+.|..++..+-.++-+..+|.+.|.+.
T Consensus       151 q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~  230 (571)
T KOG1237|consen  151 QLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIP  230 (571)
T ss_pred             HHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHH
Confidence             1256667778888999999999999999985   333333  7899999999999999999988887888999999998


Q ss_pred             HHHHHHHHHHHH
Q psy17194        232 AFVSLLDGFMLL  243 (871)
Q Consensus       232 ~~~~l~~~i~~~  243 (871)
                      .+...++.++.+
T Consensus       231 ~~~~~lai~iF~  242 (571)
T KOG1237|consen  231 TVLNALAILIFL  242 (571)
T ss_pred             HHHHHHHHHHHH
Confidence            887776555444

>KOG1237|consensus

Probab=98.05  E-value=0.00076  Score=77.23  Aligned_cols=176  Identities=16%  Similarity=0.063  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHHHHHH
Q psy17194        279 SGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQWLMVAVGLVLEGLCCFI  357 (871)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~  357 (871)
                      +....+...++..+..-+..|+.+.++.+...+.-....+.-......+.+++++|-+ ||.+.+  .++.++..++.++
T Consensus        43 l~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI--~~~s~i~~~G~~~  120 (571)
T KOG1237|consen   43 LGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTI--NIGSLISLLGLFG  120 (571)
T ss_pred             HHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHH--HHHHHHHHHHHHH
Confidence            3334444455555556677788888898887777777777777777889999999987 555533  4444444444333


Q ss_pred             hhcch----------------------h---hHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-cccch--hhHHHHHH
Q psy17194        358 IPFST----------------------S---YQMLMLPICGICFGMALVDTALLPTLGYLVDVR-YVSVY--GSIYAIAD  409 (871)
Q Consensus       358 ~~~~~----------------------~---~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~-~~~~r--g~a~gi~~  409 (871)
                      .....                      +   ...++..+.+..+|.|..-+...+.-++-.|.. +.+.+  ..-+..+.
T Consensus       121 lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~y  200 (571)
T KOG1237|consen  121 LTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFY  200 (571)
T ss_pred             HHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHH
Confidence            22111                      0   113344455556677766555555555555522 22333  46778888


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhc
Q psy17194        410 ISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNI  456 (871)
Q Consensus       410 ~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~  456 (871)
                      ...++|..++-.+.-++.++.||...|.+..+..++++++.+...+.
T Consensus       201 f~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~  247 (571)
T KOG1237|consen  201 FSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPF  247 (571)
T ss_pred             HHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCcee
Confidence            89999999999999999999999999999888888777766654443

>PF12832 MFS_1_like: MFS_1 like family

Probab=98.02  E-value=2.8e-05  Score=62.98  Aligned_cols=70  Identities=21%  Similarity=0.435  Sum_probs=60.2

Q ss_pred             HHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhhhH
Q psy17194         48 VSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGA  127 (871)
Q Consensus        48 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~G~  127 (871)
                      +...+++.....+...|.+|.+.++.|.                           ++.++|.+.++..+...++.|++|.
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl---------------------------~~~~iGil~~i~~~~~~~~~pl~g~   57 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQLGL---------------------------SPSQIGILSAIRPLIRFLAPPLWGF   57 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhhcCC---------------------------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4455666677788888999999998766                           9999999999999999999999999


Q ss_pred             hhhhhCCchHHHHHHHH
Q psy17194        128 LIDRIGYDLPMMIGLCI  144 (871)
Q Consensus       128 l~Dr~Grr~~l~~~~~~  144 (871)
                      ++||+++++.++....+
T Consensus        58 laDk~~~~~~~l~~~~~   74 (77)
T PF12832_consen   58 LADKFGKRKVILLGSLF   74 (77)
T ss_pred             HHHHHCccHHHHHHHHH
Confidence            99999998887776544

>KOG3574|consensus

Probab=97.97  E-value=0.0013  Score=68.47  Aligned_cols=163  Identities=12%  Similarity=0.069  Sum_probs=107.8

Q ss_pred             hhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCc-----hhh
Q psy17194        593 WKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPT-----YQW  667 (871)
Q Consensus       593 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~-----~~~  667 (871)
                      +++++-|.+....+.....-.++..-....++-+. +.|++..+.++.-.+.....++.....|+++.+..+     |+.
T Consensus       259 ~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLl-e~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~  337 (510)
T KOG3574|consen  259 RDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLL-EHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAV  337 (510)
T ss_pred             HHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHH-HcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhh
Confidence            56777777777777777777788777788888774 469999999888877777777777777777753211     111


Q ss_pred             HHHHHHHHHHhhHHhhh-cc-hh---h--hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHH
Q psy17194        668 LMVAVGLVLEGLCCFII-PF-ST---S--YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  740 (871)
Q Consensus       668 ~~~~~g~~~~~~~l~~~-~~-~~---~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~  740 (871)
                       ..-++.......+.++ +. ..   .  ....++.+....+..++.+....+..+......+|..-|+-+.+.|+..++
T Consensus       338 -~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL  416 (510)
T KOG3574|consen  338 -PYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL  416 (510)
T ss_pred             -hHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh
Confidence             1223333333344433 21 11   1  122344444555555565555556666665555699999999999999999


Q ss_pred             HHhHhhhhHHHhHhhhC
Q psy17194        741 AYAIGPIVAGGIVDAIG  757 (871)
Q Consensus       741 g~~~gp~~~g~l~~~~g  757 (871)
                      |+.-=..++.++.|.++
T Consensus       417 Gg~wp~tv~l~l~D~lt  433 (510)
T KOG3574|consen  417 GGNWPGTVALWLADGLT  433 (510)
T ss_pred             cCCcHHHHHHHhcccCc
Confidence            99887788888887644

>KOG3810|consensus

Probab=97.90  E-value=0.00026  Score=72.56  Aligned_cols=181  Identities=11%  Similarity=0.097  Sum_probs=113.3

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhc-CCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNL-TTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV  670 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~-g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~  670 (871)
                      +..-.+||.++.-++-..+...+++......-...++.- +-...-.|-.=+...+..+++.+..|.+.-++.+.+-+.+
T Consensus       227 l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll  306 (433)
T KOG3810|consen  227 LQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLL  306 (433)
T ss_pred             HHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHH
Confidence            456678888877677777777777776666655554432 1122223444444555566677778887655554444567


Q ss_pred             HHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHH
Q psy17194        671 AVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  750 (871)
Q Consensus       671 ~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g  750 (871)
                      .++.+..+.+++++..+.++|..-+..+++..-..+..+.....++...+   .+..|...|+++++.-+-..+-..+  
T Consensus       307 ~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~---~e~~gLvFGiNTFvAl~lQsilT~i--  381 (433)
T KOG3810|consen  307 AVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLS---SELFGLVFGINTFVALILQSILTLI--  381 (433)
T ss_pred             HHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhh---hhhheeeeehHHHHHHHHHHhheEE--
Confidence            77788888888889888888876666666655555544443334444444   7888999999988766655544433  


Q ss_pred             HhHhhhC-----------hHHHHHHHHHHHHHHHHHHHH
Q psy17194        751 GIVDAIG-----------FTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       751 ~l~~~~g-----------~~~~~~~~a~~~~~~~~~~~~  778 (871)
                       ..|.-|           |..-|.+.+++.++...+.+.
T Consensus       382 -Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~  419 (433)
T KOG3810|consen  382 -VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL  419 (433)
T ss_pred             -EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence             344222           445677778887777655443

>KOG4332|consensus

Probab=97.88  E-value=0.00023  Score=70.03  Aligned_cols=141  Identities=16%  Similarity=0.079  Sum_probs=84.3

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFG  377 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g  377 (871)
                      .|+-+.+++...++|.++.......++...+.|-++||.||||.-  ..-.+...+++ +.-.++.+..+++++.+-|+.
T Consensus        61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKrac--vtycitYiLsC-iTKhSpqYkVLmVGR~LGGia  137 (454)
T KOG4332|consen   61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRAC--VTYCITYILSC-ITKHSPQYKVLMVGRVLGGIA  137 (454)
T ss_pred             eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccce--eeehHHHHHHH-HhhcCCceEEEeehhhhhhHH
Confidence            345566888888998888776667777788889999999999832  22122222222 233556777888999999998


Q ss_pred             Hhhhhhhhhhhh-hhhhcc--ccccchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhhCh--hhHHHHHHH
Q psy17194        378 MALVDTALLPTL-GYLVDV--RYVSVYGSIYAIA-DISYSLAYAIGPIVAGGIVDAIGF--TALNFLIAF  441 (871)
Q Consensus       378 ~~~~~~~~~~~~-~~~~~~--~~~~~rg~a~gi~-~~~~~lg~~igp~l~g~l~~~~g~--~~~f~~~~~  441 (871)
                      .++....+-+.. .+-.+.  ++.+-.....+-. ...+.+-.+++...+..+.|+++.  -..|-..++
T Consensus       138 TsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAac  207 (454)
T KOG4332|consen  138 TSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAAC  207 (454)
T ss_pred             HHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHH
Confidence            888755544442 222222  1222222222222 234455566677777778887654  344444333

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=97.86  E-value=0.062  Score=58.73  Aligned_cols=236  Identities=11%  Similarity=0.034  Sum_probs=143.2

Q ss_pred             chhHHHHHHHHHHH-HHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhh---------hh---------------
Q psy17194        103 EDSATGVLFASKAI-VQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACG---------RS---------------  157 (871)
Q Consensus       103 s~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a---------~s---------------  157 (871)
                      ++..+.++-+..-+ +..+..++.+.+.+++.|.+++-+-+..+....+++++.         ++               
T Consensus        59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l  138 (509)
T COG3202          59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL  138 (509)
T ss_pred             cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence            56778888888777 677888999999999999999888777777777777653         11               


Q ss_pred             --------HHHHHHHHHHHHhhhhhhhh-hHHHHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhC-----
Q psy17194        158 --------YGVLFFARSLQGVGSAFADT-SGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAG-----  223 (871)
Q Consensus       158 --------~~~l~~~r~l~G~~~g~~~~-~~~a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~~g-----  223 (871)
                              .|...+..++.-+-.+.... .-.....|.. ..+|-.|..+.++...+++..++..+..++.++-.     
T Consensus       139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit-t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~  217 (509)
T COG3202         139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT-TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASE  217 (509)
T ss_pred             eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHH
Confidence                    13333444444443343333 4556778874 66788999999999999999999988888776321     


Q ss_pred             -----ChhHHHHHHHHHHHHHHHHHHhcccchhh------hccCCCCCCcc----cchhhhhcchhHHHHHHHHHHHHHH
Q psy17194        224 -----KEIPFLILAFVSLLDGFMLLLVMKPVKEQ------LNQKKPESHST----VPIWKLFMDPYIAVCSGALLMANVA  288 (871)
Q Consensus       224 -----wr~~f~~~~~~~l~~~i~~~~~~~~~~~~------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  288 (871)
                           .+..+.+.+..++++..+..+.-+...++      ...++++++.+    ...+.+.|+|.++.+.....+.+.+
T Consensus       218 ~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~  297 (509)
T COG3202         218 FKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVS  297 (509)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence                 34445555555454444433332221111      11111111111    2345566778877777776666666


Q ss_pred             HHHHHHHHHHHHHHhhCCCchhHHH---HHHhhHHh-HHHHHHHHHHHHhhcCch
Q psy17194        289 LAFLEPTISLWIEDNLTTDNWKIGM---IWLPAFFP-HVFGVVITVKLAKLYPTY  339 (871)
Q Consensus       289 ~~~~~~~~~~~l~~~~g~s~~~~g~---~~~~~~~~-~~~~~~~~g~l~dr~g~~  339 (871)
                      ...+....-.-+++.+..+......   .....++. .++...+++.+.+|.|-.
T Consensus       298 inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~  352 (509)
T COG3202         298 INLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF  352 (509)
T ss_pred             HHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence            6655544444445444433332222   22333333 445567788888888743

>KOG3098|consensus

Probab=97.82  E-value=0.0047  Score=67.98  Aligned_cols=106  Identities=14%  Similarity=0.019  Sum_probs=76.8

Q ss_pred             HHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy17194        315 WLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVD  394 (871)
Q Consensus       315 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~  394 (871)
                      .++......+..++.+.+.|+.+.|..+  .++........+.+.+ .|.+..++.-.+.|+|.++.+   ...-.++.+
T Consensus        56 ~aiiY~~ftv~~l~~psiv~~i~~K~~l--v~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw---~GqG~ylt~  129 (461)
T KOG3098|consen   56 QAIIYAFFTVSCLFAPSIVNFLGPKWAL--VIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLW---TGQGGYLTS  129 (461)
T ss_pred             HHHHHHHHHHHHHhhHHHHHHhhHHHHH--HHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHhee---cccceehhh
Confidence            5666777888899999999999998844  6666666655555433 456777888899999999863   333445566


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        395 VRYVSVYGSIYAIADISYSLAYAIGPIVAGGI  426 (871)
Q Consensus       395 ~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l  426 (871)
                      ...++.+.+..++.-.....+..+|..+.-.+
T Consensus       130 ~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~  161 (461)
T KOG3098|consen  130 NSTRETIERNISIFWAIGQSSLIIGGIILFIY  161 (461)
T ss_pred             cCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence            55668888889988888888877776554433

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.77  E-value=0.0039  Score=69.45  Aligned_cols=106  Identities=12%  Similarity=0.030  Sum_probs=59.8

Q ss_pred             hhhhccchhhhhhhhhhhhhhhccCch--hhHHHHHHHHHHhhHHhhhcc---------hhhhHHHHHHHHHHhhhhhhc
Q psy17194        639 MIWLPAFFPHVFGVVITVKLAKLYPTY--QWLMVAVGLVLEGLCCFIIPF---------STSYQMLMLPICGICFGMALV  707 (871)
Q Consensus       639 l~~~~~~~~~~i~~~~~g~l~d~~~~~--~~~~~~~g~~~~~~~l~~~~~---------~~~~~~~~~~~~~~g~~~~~~  707 (871)
                      .++....++..+|+.+..+.. .-.++  .++...+.=+++...++++..         -.+.+..++.++.+|+..|..
T Consensus       311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~  389 (437)
T TIGR00939       311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL  389 (437)
T ss_pred             HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence            456677888888887664431 11112  222222221222222222221         134455566788889988887


Q ss_pred             chhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        708 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      .+..+-.....++   ++++-.+..+.+.+-.+|-++|..+
T Consensus       390 ~s~~m~~~p~~v~---~~e~e~aG~~~~~~l~~Gl~~Gs~l  427 (437)
T TIGR00939       390 GSLSMCLAPRQVD---PHEREVAGALMVIFLLVGLALGAVL  427 (437)
T ss_pred             HHHHHHhcCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6655444444444   6677777778888888888877765

>PF12832 MFS_1_like: MFS_1 like family

Probab=97.63  E-value=0.00012  Score=59.26  Aligned_cols=63  Identities=16%  Similarity=0.135  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhh
Q psy17194        604 CSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQW  667 (871)
Q Consensus       604 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~  667 (871)
                      .-...++.+.++..+.+++|.|+++ .|+|+.++|++.....+..+++.++.|+++||++++|.
T Consensus         5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~   67 (77)
T PF12832_consen    5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV   67 (77)
T ss_pred             HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence            3456777888888999999999965 79999999999999999999999999999999998873

>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]

Probab=97.51  E-value=0.0072  Score=65.89  Aligned_cols=163  Identities=13%  Similarity=0.133  Sum_probs=94.2

Q ss_pred             hhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCch------
Q psy17194        592 IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTY------  665 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~------  665 (871)
                      +++++|-|++....+..+..-.++..-.....+=+- +.|++..+.++.-.+..-..++.....||++.-..+.      
T Consensus       271 l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLl-EkG~~KE~LAl~~li~~P~qii~~~~~~Kws~g~~P~~~~~~~  349 (544)
T PF13000_consen  271 LWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLL-EKGLSKEDLALLVLIDFPFQIILPYYIGKWSAGSPPLDVDNKA  349 (544)
T ss_pred             HHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHH-HcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhcCCCcccccccc
Confidence            477889999998888888888887777777776664 4699999988887777666777777777776422210      


Q ss_pred             ---------------------hhHH-HHHHHHHHhh-HHhh-hcc--hh--hhHHHHHHHHHHhhhhhhcchhhhhhhhh
Q psy17194        666 ---------------------QWLM-VAVGLVLEGL-CCFI-IPF--ST--SYQMLMLPICGICFGMALVDTALLPTLGY  717 (871)
Q Consensus       666 ---------------------~~~~-~~~g~~~~~~-~l~~-~~~--~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  717 (871)
                                           +.|. ...+=++.++ +.+. ..+  ..  +.+.+.+.++...++....+....+..+.
T Consensus       350 l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AF  429 (544)
T PF13000_consen  350 LPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAF  429 (544)
T ss_pred             ccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                 1111 1111111111 1111 111  11  12222222222333333333333333444


Q ss_pred             hhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhHhh
Q psy17194        718 LVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  755 (871)
Q Consensus       718 ~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~  755 (871)
                      .....+|..=|+-+.+.|++.++|+.--..+.=+++|.
T Consensus       430 harISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~  467 (544)
T PF13000_consen  430 HARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY  467 (544)
T ss_pred             HhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence            44334488899999999999999987655555555554

This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane

>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT)

Probab=97.41  E-value=0.079  Score=59.13  Aligned_cols=100  Identities=14%  Similarity=0.134  Sum_probs=54.6

Q ss_pred             HHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHH-HHhh-------hhHHHHHHHHHHHHhhhhhhhhhHH
Q psy17194        109 VLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTAL-FACG-------RSYGVLFFARSLQGVGSAFADTSGL  180 (871)
Q Consensus       109 ~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l-~~~a-------~s~~~l~~~r~l~G~~~g~~~~~~~  180 (871)
                      ++.-...+...+..+..-.+.-|+..|.=+..++++..+..++ ..+.       ..++..++.-++.|++.+.......
T Consensus        49 ~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~  128 (437)
T TIGR00939        49 YYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLF  128 (437)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccch
Confidence            3333444445555555555555665433333343322222222 1111       2466777777889999999999989


Q ss_pred             HHhhcccCChhhHHHHHHHHHHHHHHHHHHhHHH
Q psy17194        181 AMIADRFTEENERSQALGIALAFISFGCLVAPPF  214 (871)
Q Consensus       181 a~i~~~~~~~~~r~~~~g~~~~~~~~G~~lg~~l  214 (871)
                      ++.+. + |++    .++.+..+.+++.+++.++
T Consensus       129 gla~~-f-p~~----~~~a~~~G~g~aGv~~s~~  156 (437)
T TIGR00939       129 GLAGV-F-PST----YSSAVMSGQGLAGVLTSLA  156 (437)
T ss_pred             hhccc-C-CHH----HHHHHHhcchhHHHHHHHH
Confidence            99987 5 433    3444555555555554443

>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]

Probab=97.34  E-value=0.016  Score=61.35  Aligned_cols=149  Identities=19%  Similarity=0.306  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHhhCCCc--hhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchh--hH
Q psy17194        290 AFLEPTISLWIEDNLTTDN--WKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTS--YQ  365 (871)
Q Consensus       290 ~~~~~~~~~~l~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  365 (871)
                      .......+.+..+ ++.+.  ...++..+...+...++.++.|++.||+|||+.+  ..+.....++.+...+..+  .+
T Consensus        19 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   95 (338)
T COG0477          19 GLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL--IIGLLLFLLGTLLLALAPNVGLA   95 (338)
T ss_pred             chHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH--HHHHHHHHHHHHHHHhCccchHH
Confidence            3344445554443 44444  4678888888999999999999999999988654  3444333333444444444  66


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHH-HHHHHHHHHHHHHHHHHhh--hChhhHHHHHHHH
Q psy17194        366 MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADI-SYSLAYAIGPIVAGGIVDA--IGFTALNFLIAFM  442 (871)
Q Consensus       366 ~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~-~~~lg~~igp~l~g~l~~~--~g~~~~f~~~~~~  442 (871)
                      .+++.+...+++.+...+.......+..+.  .++|+...+.... ...+|..++|.+++.+...  .+|+..|......
T Consensus        96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (338)
T COG0477          96 LLLILRLLQGLGGGGLLPVASALLSEWFPE--ATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL  173 (338)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHhcCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence            677777777777776544444444433332  1578888888887 5778888888887777665  5677755554443


Q ss_pred             H
Q psy17194        443 N  443 (871)
Q Consensus       443 ~  443 (871)
                      .
T Consensus       174 ~  174 (338)
T COG0477         174 G  174 (338)
T ss_pred             H
Confidence            3

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=97.26  E-value=0.001  Score=73.26  Aligned_cols=108  Identities=21%  Similarity=0.274  Sum_probs=88.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhh---h------hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCCh--hhHHHHHHHHHHHH
Q psy17194        136 LPMMIGLCIMFLSTALFACG---R------SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEE--NERSQALGIALAFI  204 (871)
Q Consensus       136 ~~l~~~~~~~~i~~~l~~~a---~------s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~--~~r~~~~g~~~~~~  204 (871)
                      |.++++.+++.+|.++..++   .      +.+.++++-.+.++|.|..-|...++++|.+.++  ++|.+.+.+++.+.
T Consensus         2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i   81 (372)
T PF00854_consen    2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI   81 (372)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred             HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence            56788888899998885544   2      2367888999999999999999999999999653  46888999999999


Q ss_pred             HHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHH
Q psy17194        205 SFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLL  243 (871)
Q Consensus       205 ~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~  243 (871)
                      ++|..++..+.+++-++.||.+.|.+.++..++..+..+
T Consensus        82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~  120 (372)
T PF00854_consen   82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL  120 (372)
T ss_dssp             HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999888776555433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>KOG3880|consensus

Probab=97.23  E-value=0.00087  Score=67.52  Aligned_cols=137  Identities=15%  Similarity=0.198  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhccc
Q psy17194        108 GVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRF  187 (871)
Q Consensus       108 g~~~s~~~l~~~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~  187 (871)
                      |.+.-+-.+...+..+.+....||+---+-..+..++.+.+..+.+++++.++-+++-.+..++.|.......++-+. +
T Consensus        65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~-Y  143 (409)
T KOG3880|consen   65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR-Y  143 (409)
T ss_pred             chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-C
Confidence            445555666666677777778888754443455667788889999999999999999999999999888777777666 3


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh--hCChhHHHHHHHHHHHHHHHHHHhcccch
Q psy17194        188 TEENERSQALGIALAFISFGCLVAPPFGGALYQF--AGKEIPFLILAFVSLLDGFMLLLVMKPVK  250 (871)
Q Consensus       188 ~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~--~gwr~~f~~~~~~~l~~~i~~~~~~~~~~  250 (871)
                      ++ .    ..+.++.+.+.+.++|..--..+.+.  +.-|...++...+.++.++..++.+++++
T Consensus       144 ~~-~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe  203 (409)
T KOG3880|consen  144 PS-I----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE  203 (409)
T ss_pred             CC-c----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence            22 1    34445555555556665544445543  34678888887777776666666666543

>KOG1479|consensus

Probab=97.21  E-value=0.16  Score=54.74  Aligned_cols=32  Identities=16%  Similarity=0.124  Sum_probs=25.2

Q ss_pred             hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCC
Q psy17194        157 SYGVLFFARSLQGVGSAFADTSGLAMIADRFTE  189 (871)
Q Consensus       157 s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~  189 (871)
                      .+...++.-++.|++.|......+...++ +|+
T Consensus       116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~  147 (406)
T KOG1479|consen  116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPS  147 (406)
T ss_pred             hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCH
Confidence            45666777788899999998888898888 443

>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters

Probab=97.17  E-value=0.0034  Score=51.31  Aligned_cols=78  Identities=14%  Similarity=0.245  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHH
Q psy17194        287 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQM  366 (871)
Q Consensus       287 ~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (871)
                      .+-+.+.+.+|. ++++.++|..+.+++.+...+++.+|.+...++.++.++++.+  ..+++...+..+.+++.++.+.
T Consensus         6 igRFayTplLP~-M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~--~~~l~~~~~~~~~ma~~~~~~~   82 (85)
T PF06779_consen    6 IGRFAYTPLLPL-MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLL--RAGLLLTVLSTAAMALTHSFWL   82 (85)
T ss_pred             hHHHHHHhHhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH--HHHHHHHHHHHHHHHHHhchHH
Confidence            445566777777 5666899999999999999999999999999999987767744  7788888888888888777664


Q ss_pred             H
Q psy17194        367 L  367 (871)
Q Consensus       367 l  367 (871)
                      +
T Consensus        83 w   83 (85)
T PF06779_consen   83 W   83 (85)
T ss_pred             H
Confidence            4

Note that many members are hypothetical proteins.

>PRK03612 spermidine synthase; Provisional

Probab=97.16  E-value=0.039  Score=63.13  Aligned_cols=163  Identities=16%  Similarity=0.131  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH-HHHHHh
Q psy17194        280 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG-LCCFII  358 (871)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~-~~~~~~  358 (871)
                      ...++..++...+.......+...+|.+....+.+++.+..+..+|..+++++.++..++. ...-+.+.+.+ ++..+.
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll   99 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALIL   99 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHH
Confidence            3444445555555555556666678888888999999999999999999888764432222 11111111111 111111


Q ss_pred             ----hcchhhH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH-hhhCh
Q psy17194        359 ----PFSTSYQ-MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV-DAIGF  432 (871)
Q Consensus       359 ----~~~~~~~-~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~-~~~g~  432 (871)
                          .+..... ..+...++.++..|+.    .|....+......++.|...|-......+|+++|+++.+++. ..+|.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~----~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~  175 (521)
T PRK03612        100 YAAFAFQGLSRLLLYVLVLLIGLLIGME----IPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL  175 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence                1111111 1122222334444444    455444443322223567778888889999999999988765 47887


Q ss_pred             hhHHHHHHHHHHHHH
Q psy17194        433 TALNFLIAFMNILYA  447 (871)
Q Consensus       433 ~~~f~~~~~~~~~~~  447 (871)
                      ....++.+.+.++..
T Consensus       176 ~~t~~~~a~l~~~~a  190 (521)
T PRK03612        176 IRTAALTGSLNLLAA  190 (521)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            666555555544433

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=96.84  E-value=0.021  Score=57.12  Aligned_cols=94  Identities=5%  Similarity=-0.112  Sum_probs=54.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhHHHHHHH---Hh--hhCChhHHHHHHHHHHHHHHHHHHhcccchhhhcc-C----CCCC
Q psy17194        191 NERSQALGIALAFISFGCLVAPPFGGAL---YQ--FAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ-K----KPES  260 (871)
Q Consensus       191 ~~r~~~~g~~~~~~~~G~~lg~~l~~~l---~~--~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~-~----~~~~  260 (871)
                      ++|+....+...+.++|.++.-+.--.-   .+  .-.|++.+.+.+++.++.+++..++-++-....++ +    +...
T Consensus         2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~   81 (267)
T PF07672_consen    2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTL   81 (267)
T ss_pred             CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccc
Confidence            4566666677777778877654332111   11  12599999999988877766666554432111111 1    1112


Q ss_pred             CcccchhhhhcchhHHHHHHHHHH
Q psy17194        261 HSTVPIWKLFMDPYIAVCSGALLM  284 (871)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~  284 (871)
                      ..+....+.+|++..+...+.+..
T Consensus        82 ~~~~s~~~~LK~K~tw~w~~~Yg~  105 (267)
T PF07672_consen   82 SKKPSYKSILKEKETWKWILIYGI  105 (267)
T ss_pred             cccchHHHHHccchHHHHHHHHHH
Confidence            234567789999887776655443

>PRK03612 spermidine synthase; Provisional

Probab=96.82  E-value=0.025  Score=64.71  Aligned_cols=166  Identities=16%  Similarity=0.136  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH-hhHHhhh
Q psy17194        606 GALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE-GLCCFII  684 (871)
Q Consensus       606 ~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~-~~~l~~~  684 (871)
                      +..++..++-..+.....-.+...+|-+....+++.+...++..+|+.+++++.++. .++....-+++.+. +++..++
T Consensus        21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ll   99 (521)
T PRK03612         21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALIL   99 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence            344555555556666667777777899999999999999999999999988886432 22211111111111 1111111


Q ss_pred             ----cchhhhHH-HHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH-hhhCh
Q psy17194        685 ----PFSTSYQM-LMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV-DAIGF  758 (871)
Q Consensus       685 ----~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~-~~~g~  758 (871)
                          ++...... ....++..++.+|...    |++.........+..|...|-......+|+.+|.++.|++. ..+|.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~l~G~~~----Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~  175 (521)
T PRK03612        100 YAAFAFQGLSRLLLYVLVLLIGLLIGMEI----PLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGL  175 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence                11111111 1222333445555543    33343333221223566777778888899999999988765 47888


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q psy17194        759 TALNFLIAFMNILYAPVL  776 (871)
Q Consensus       759 ~~~~~~~a~~~~~~~~~~  776 (871)
                      ..+..+.+.+.++.+.+.
T Consensus       176 ~~t~~~~a~l~~~~a~~~  193 (521)
T PRK03612        176 IRTAALTGSLNLLAALVF  193 (521)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            777777777666555333

>KOG1479|consensus

Probab=96.78  E-value=0.11  Score=55.98  Aligned_cols=100  Identities=11%  Similarity=0.017  Sum_probs=53.2

Q ss_pred             cchhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhh-h------cchhhhHHHHHHHHHHhhhhhhcchhhhhhhh
Q psy17194        644 AFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFI-I------PFSTSYQMLMLPICGICFGMALVDTALLPTLG  716 (871)
Q Consensus       644 ~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~-~------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  716 (871)
                      .-+...+|.+.+.++.++- +|.+ .+...+=+.-+=+++ +      ..-.+.++.+..++.+|+..|......+....
T Consensus       292 fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aP  369 (406)
T KOG1479|consen  292 FNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAP  369 (406)
T ss_pred             hHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehhcC
Confidence            4566777877776665543 3332 322322222222222 1      12334456677888888988887665554444


Q ss_pred             hhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        717 YLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       717 ~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      +-++   ++++-.|..+.+.+-..|-+.|..+
T Consensus       370 k~v~---~~e~e~aG~~m~~fl~~Gl~~G~~~  398 (406)
T KOG1479|consen  370 KQVK---PSEKEAAGNLMVFFLVGGLALGSLL  398 (406)
T ss_pred             CCCC---hHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            4433   4444455555555555666666544

>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans

Probab=96.54  E-value=0.19  Score=47.04  Aligned_cols=107  Identities=13%  Similarity=0.008  Sum_probs=73.9

Q ss_pred             HHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy17194        314 IWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLV  393 (871)
Q Consensus       314 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~  393 (871)
                      -.++......+..++.+.+.+++|.|+.+  .++.+...+-.... +-++.+.++.+..+.|++.+..+......   +.
T Consensus        42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm--~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~y---lt  115 (156)
T PF05978_consen   42 SLAILYGSFAISCLFAPSIVNKLGPKWSM--ILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTY---LT  115 (156)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhHHHH--HHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHH---HH
Confidence            34445566777788889999999998854  66666655444333 34567778888889999999885554444   33


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        394 DVRYVSVYGSIYAIADISYSLAYAIGPIVAGGI  426 (871)
Q Consensus       394 ~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l  426 (871)
                      ....++.+++..++.-.....+..+|..+.-.+
T Consensus       116 ~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~  148 (156)
T PF05978_consen  116 SYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI  148 (156)
T ss_pred             HcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            433457889988988888777777776655443

UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].

>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters

Probab=96.43  E-value=0.012  Score=64.72  Aligned_cols=111  Identities=14%  Similarity=0.078  Sum_probs=85.6

Q ss_pred             HHHHHHHHHHHHHhhcc---h------hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHH
Q psy17194        345 AVGLVLEGLCCFIIPFS---T------SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA  415 (871)
Q Consensus       345 ~~~~~~~~~~~~~~~~~---~------~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg  415 (871)
                      ..+.++..+|.+++..+   .      +.+.+++++.+.++|.|..-+...+...+..++..+++|.+.+..+..+.++|
T Consensus         5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G   84 (372)
T PF00854_consen    5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG   84 (372)
T ss_dssp             HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence            55666666666663322   1      22567888889999999998888888888777644677888999999999999


Q ss_pred             HHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        416 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       416 ~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      ..+++.+.+++.++.||.+.|.+.++..+++++..+..++
T Consensus        85 ~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~  124 (372)
T PF00854_consen   85 SLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRK  124 (372)
T ss_dssp             HHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             hHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999888877766554433

The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.

>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions

Probab=96.42  E-value=2.3  Score=48.00  Aligned_cols=74  Identities=7%  Similarity=0.067  Sum_probs=47.3

Q ss_pred             chhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccc----hhhhhhccchhhhhhhhhhhhhhhccCch
Q psy17194        591 PIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK----IGMIWLPAFFPHVFGVVITVKLAKLYPTY  665 (871)
Q Consensus       591 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~----~gl~~~~~~~~~~i~~~~~g~l~d~~~~~  665 (871)
                      .++.++++|.+....+...+.+.....+....-..+++.+- ++.+    .|-.....++..++...+++++.+|+|=+
T Consensus       272 s~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~  349 (491)
T PF03219_consen  272 SFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR  349 (491)
T ss_pred             HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence            34678888888877776666666666666655555555442 2222    23334455666666677888888888754

One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane

>KOG3097|consensus

Probab=96.30  E-value=0.57  Score=48.53  Aligned_cols=219  Identities=15%  Similarity=0.090  Sum_probs=115.6

Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCC--hhhH---
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTE--ENER---  193 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~--~~~r---  193 (871)
                      +.++.+.+.+..++|-|..+.++...+..... .=+=+.+..++-.-.+.|++.+..+..--+++++. ..  .++|   
T Consensus        72 ~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~-g~~ya~~~~~q  149 (390)
T KOG3097|consen   72 IDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM-GQNYANQRGEQ  149 (390)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHH-HHHHHHhhhhh
Confidence            34444555889999999999988877664332 22336788999999999999998887655555543 11  1233   


Q ss_pred             ----------HHHHHHHHHHHHHHHHHhHHHHHHHHhhh------------C------------------------ChhH
Q psy17194        194 ----------SQALGIALAFISFGCLVAPPFGGALYQFA------------G------------------------KEIP  227 (871)
Q Consensus       194 ----------~~~~g~~~~~~~~G~~lg~~l~~~l~~~~------------g------------------------wr~~  227 (871)
                                +..+.+++...-.|.++...+-....+..            |                        -..+
T Consensus       150 ~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i  229 (390)
T KOG3097|consen  150 AGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLI  229 (390)
T ss_pred             ccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHH
Confidence                      23445555555566555555543333220            0                        1133


Q ss_pred             HHHHHHHHHHHHHHHH-HhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhC
Q psy17194        228 FLILAFVSLLDGFMLL-LVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPT-ISLWIEDNLT  305 (871)
Q Consensus       228 f~~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~g  305 (871)
                      |+-+.++..+...+.. ...+...+. -.+........-..+.++++++...+-.......-......- .-.|..-  +
T Consensus       230 ~L~c~via~~~~~~~~~~l~r~~~~r-~~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c--~  306 (390)
T KOG3097|consen  230 FLPCMVIAVLIMLFFLGALKRYGEKR-LASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVAC--A  306 (390)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhh-hhcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhh--h
Confidence            4333333222111111 111111111 000000011112234456666655444333333322222111 1111221  3


Q ss_pred             CCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHH
Q psy17194        306 TDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWL  342 (871)
Q Consensus       306 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~  342 (871)
                      +.-..++..+..+++...+.+.+.|.+.+++||-...
T Consensus       307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~  343 (390)
T KOG3097|consen  307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLL  343 (390)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHH
Confidence            3455788899999999999999999999999987644

>KOG2601|consensus

Probab=94.87  E-value=2.3  Score=44.91  Aligned_cols=171  Identities=10%  Similarity=0.027  Sum_probs=87.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHH-----HH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVA-----VG  347 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~-----~~  347 (871)
                      +..+.+...+++.....-........|+.+..|-|-..++.-...-.....+...+.|...|+..|+|++...     .+
T Consensus        27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlS  106 (503)
T KOG2601|consen   27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLS  106 (503)
T ss_pred             ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHH
Confidence            3334455566666666656666666777766664544444443344445555666778888999888854211     12


Q ss_pred             HHHHHHHHHHhhcch-----hhHHHHHHHHHHHHHHhhhhhhhhhhhhhh-h---------ccccccchhhHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFST-----SYQMLMLPICGICFGMALVDTALLPTLGYL-V---------DVRYVSVYGSIYAIADISY  412 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~-----~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~-~---------~~~~~~~rg~a~gi~~~~~  412 (871)
                      .++.+...+.+....     +.+.+..+ .+.....+.+ ....+....+ .         +.-+++.....++.....-
T Consensus       107 v~vagglvi~~l~~~~~~~~t~pv~t~~-lvLa~~i~aI-~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iD  184 (503)
T KOG2601|consen  107 VIVAGGLVITLLVHKDLKSATSPVFTVC-LVLANLIAAI-AVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGID  184 (503)
T ss_pred             HHHHHHHHhhheeecchhcccccHHHHH-HHHHHHHHHH-HHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhh
Confidence            222222222222212     23333222 2222222222 1111111111 1         1112223333446666667


Q ss_pred             HHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHH
Q psy17194        413 SLAYAIGPIVAGGIVDAIGFTALNFLIAFMNIL  445 (871)
Q Consensus       413 ~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~  445 (871)
                      .....+.|.+.|.+....+.+..-.++++-.++
T Consensus       185 q~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  185 QSTNLLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             hhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence            778899999999999988877765555554444

>KOG4830|consensus

Probab=94.69  E-value=0.013  Score=57.66  Aligned_cols=65  Identities=6%  Similarity=0.099  Sum_probs=41.9

Q ss_pred             ccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHH
Q psy17194        263 TVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVV  327 (871)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~  327 (871)
                      ..++...+++-.+......+.+.-........+++.|..++++.+.....++-.+..+.....+.
T Consensus       191 Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~  255 (412)
T KOG4830|consen  191 RMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSM  255 (412)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHh
Confidence            34555666776777777777777777777778888887777777666666655444444443333

>KOG3880|consensus

Probab=94.56  E-value=0.47  Score=48.56  Aligned_cols=134  Identities=17%  Similarity=0.169  Sum_probs=80.1

Q ss_pred             HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy17194        311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLG  390 (871)
Q Consensus       311 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~  390 (871)
                      .|.+...-.+-..+..+......||+.-....  .....+.+.+.++.+++++.++-+.+..+..++.|.....+...  
T Consensus        64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~l--  139 (409)
T KOG3880|consen   64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLAL--  139 (409)
T ss_pred             cchhhhhhhhHHHHHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhh--
Confidence            45555555666777777888889987543322  44566677788888899988887777777777766542222222  


Q ss_pred             hhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--hhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        391 YLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--FTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       391 ~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                        ...+++    ...+-++.+.+.++.+|..-...+.+..+  .+...++...+-++.+..++++.
T Consensus       140 --ss~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL  199 (409)
T KOG3880|consen  140 --SSRYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLL  199 (409)
T ss_pred             --hccCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHhee
Confidence              222222    22333444445556666666666666444  56666666655555555555443

>COG3202 ATP/ADP translocase [Energy production and conversion]

Probab=92.84  E-value=19  Score=40.12  Aligned_cols=127  Identities=13%  Similarity=0.150  Sum_probs=70.2

Q ss_pred             HHHhhCC---CchhHHHHHHhhHH-hHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHH---HHHHhhc----------ch
Q psy17194        300 IEDNLTT---DNWKIGMIWLPAFF-PHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGL---CCFIIPF----------ST  362 (871)
Q Consensus       300 l~~~~g~---s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~---~~~~~~~----------~~  362 (871)
                      ++|.+..   ++..+.++-+...+ +.++..++..++.+++.+.+++.+..+..+...   +.++.+.          ..
T Consensus        49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~  128 (509)
T COG3202          49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR  128 (509)
T ss_pred             hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence            5665543   35555666555555 667778889999999998887644433332222   2222211          11


Q ss_pred             h-----h------------HHHHHHHHHH-HHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q psy17194        363 S-----Y------------QMLMLPICGI-CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAG  424 (871)
Q Consensus       363 ~-----~------------~~l~~~~~l~-g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g  424 (871)
                      +     .            |...+..... -.|.-...-.+.....++.+.   ++..+-+++++.+.+++..++..+..
T Consensus       129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~---~eakRFy~lf~l~~ni~lllsg~~~~  205 (509)
T COG3202         129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTI---EEAKRFYPLFGLGANISLLLSGEVTS  205 (509)
T ss_pred             HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH---HHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence            0     0            1111111111 111111111233334444444   78889999999999999998888888


Q ss_pred             HHHhh
Q psy17194        425 GIVDA  429 (871)
Q Consensus       425 ~l~~~  429 (871)
                      ++..+
T Consensus       206 ~~~k~  210 (509)
T COG3202         206 WLSKH  210 (509)
T ss_pred             HHhhc
Confidence            87663

>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs

Probab=90.99  E-value=0.071  Score=56.87  Aligned_cols=107  Identities=12%  Similarity=0.068  Sum_probs=2.4

Q ss_pred             hhhhccchhhhhhhhhhhhhhhccCchhhHHH-HHHHHHHhhHHhhhcc----------hhhhHHHHHHHHHHhhhhhhc
Q psy17194        639 MIWLPAFFPHVFGVVITVKLAKLYPTYQWLMV-AVGLVLEGLCCFIIPF----------STSYQMLMLPICGICFGMALV  707 (871)
Q Consensus       639 l~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~-~~g~~~~~~~l~~~~~----------~~~~~~~~~~~~~~g~~~~~~  707 (871)
                      .++....++..+|+.+.++..-+..++|++.. .+.=+++...++++..          -.+.+..++.++.+|+..|..
T Consensus       186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl  265 (309)
T PF01733_consen  186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL  265 (309)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence            35667888999999887654211112232121 1111111111222211          123344566788889988887


Q ss_pred             chhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhh
Q psy17194        708 DTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIV  748 (871)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~  748 (871)
                      .+..+-.....++   ++++..+..+.+++-.+|-.+|..+
T Consensus       266 ~tl~m~~~p~~v~---~~e~e~aG~~~~~~L~~Gl~~Gs~l  303 (309)
T PF01733_consen  266 STLAMMYAPKSVS---PEERELAGSVMSFFLSFGLFIGSVL  303 (309)
T ss_dssp             -HHHH------------------------------------
T ss_pred             hhceeeeCCCcCC---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6655555555555   5556666666666667777777654

Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.

>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS)

Probab=90.01  E-value=4.7  Score=40.80  Aligned_cols=59  Identities=7%  Similarity=-0.015  Sum_probs=33.8

Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHhcccc---hhhhccCCC--CCCcccchhhhccchhHHHHHH
Q psy17194        548 AGKEIPFLILAFVSLLDGFMLLLVMKPV---KEQLNQKKP--ESHSTVPIWKLFMDPYIAVCSG  606 (871)
Q Consensus       548 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~  606 (871)
                      ..|++.+.+.+++.++.+++...+-++-   ..+++++++  ....+....+++|++.-+.-.+
T Consensus        38 ~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~~~~~s~~~~LK~K~tw~w~~  101 (267)
T PF07672_consen   38 NNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTLSKKPSYKSILKEKETWKWIL  101 (267)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccccccchHHHHHccchHHHHHH
Confidence            3588888888877777777766664441   111011111  1122245689999998775543

>KOG2601|consensus

Probab=86.90  E-value=12  Score=39.87  Aligned_cols=166  Identities=15%  Similarity=0.088  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      +.+.+++++...+--+.......++..++-                          .|....+.-...-.....+..++.
T Consensus        30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~g--------------------------nsl~lvAvyglvesgs~lvlg~iv   83 (503)
T KOG2601|consen   30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGG--------------------------NSLLLVAVYGLVESGSQLVLGPIV   83 (503)
T ss_pred             ehhhHHHHHhHhhHhHHHHHHHHHHHHHcC--------------------------ceehhHHHHHHHHHhHHHhhHHHH
Confidence            345667776666655555556666666542                          234444444445556677788899


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHH------hh-h-----hHHHHHHHHHHHHhhhhhhhhh--HHH--Hhhccc--
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFA------CG-R-----SYGVLFFARSLQGVGSAFADTS--GLA--MIADRF--  187 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~------~a-~-----s~~~l~~~r~l~G~~~g~~~~~--~~a--~i~~~~--  187 (871)
                      |...|+..|+|++...+.+.-++.+.++      +. +     ++..+..+-++.-...+...-.  +.+  +-.||+  
T Consensus        84 Gq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV  163 (503)
T KOG2601|consen   84 GQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVV  163 (503)
T ss_pred             HHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEE
Confidence            9999999999998876665544444333      22 2     4444444444433322222111  111  112221  


Q ss_pred             -CChhhHHHHH---HHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHH
Q psy17194        188 -TEENERSQAL---GIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLL  237 (871)
Q Consensus       188 -~~~~~r~~~~---g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~  237 (871)
                       ...+.+....   +.....-..-..+.|.+.|.+.+..+-|..-...++-.++
T Consensus       164 ~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v  217 (503)
T KOG2601|consen  164 MSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV  217 (503)
T ss_pred             ecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence             1223344433   5555555566789999999998888877765555555554

>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea

Probab=80.19  E-value=98  Score=33.99  Aligned_cols=22  Identities=27%  Similarity=0.425  Sum_probs=15.7

Q ss_pred             hhhhccchhHHHHHHHHHHHHH
Q psy17194        592 IWKLFMDPYIAVCSGALLMANV  613 (871)
Q Consensus       592 ~~~l~~~~~~~~~~~~~~~~~~  613 (871)
                      +++.+++|.++...++..+...
T Consensus       238 ~~~~~~nP~~~a~~lgli~~~~  259 (385)
T PF03547_consen  238 ILKLFKNPPLIAIILGLIIGLI  259 (385)
T ss_pred             HHHHHhCcHHHHHHHHHHHHHH
Confidence            4778889998877666655544

Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	871
2cfq_A	417	Lactose permease; transport, transport mechanism,	4e-15
2cfq_A	417	Lactose permease; transport, transport mechanism,	7e-10
2cfq_A	417	Lactose permease; transport, transport mechanism,	2e-05
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	2e-12
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	4e-11
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	1e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 77.7 bits (191), Expect = 4e-15
 Identities = 49/361 (13%), Positives = 115/361 (31%), Gaps = 16/361 (4%)

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMI---GLCIMFLSTALFACGRSYGVL 161
           S TG++FA+ ++  L+  P  G L D++G    ++    G+ +MF    +F  G      
Sbjct: 43  SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYN 102

Query: 162 FFARSLQGVGSAFADTSGLAMIADRFTEENERSQAL--GIALAFISFGCLVAPPFGGALY 219
               S+ G        +  A   + F E+  R      G A  F   G  +     G ++
Sbjct: 103 ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMF 162

Query: 220 QFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP----IWKLFMDPYI 275
               + + +L      +L   +                  ++ +        +LF  P +
Sbjct: 163 TINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKL 222

Query: 276 AVCSGALLMANVALAFLE---PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKL 332
              S  ++  +      +                     G +       +   +     +
Sbjct: 223 WFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLI 282

Query: 333 AKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYL 392
                    L++A    +  +      F+TS   +++      F +  +       +   
Sbjct: 283 INRIGGKNALLLA--GTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQ 340

Query: 393 VDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY 452
            +VR+ +    +         LA     ++AG + ++IGF     ++  + + +  + ++
Sbjct: 341 FEVRFSATIYLVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVF 398

Query: 453 L 453
            
Sbjct: 399 T 399

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 61.1 bits (148), Expect = 7e-10
 Identities = 21/161 (13%), Positives = 50/161 (31%), Gaps = 2/161 (1%)

Query: 98  EHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRS 157
              E      G +     ++   +  F+  +I+RIG    +++   IM +     +   S
Sbjct: 252 ATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVRIIGSSFATS 311

Query: 158 YGVLFFARSLQGVGSAFADTSGLAMIADRFTEENE-RSQALGIALAFISFGCLVAPPFGG 216
              +   ++L      F        I  +F          +           +      G
Sbjct: 312 ALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFK-QLAMIFMSVLAG 370

Query: 217 ALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK 257
            +Y+  G +  +L+L  V+L    + +  +         ++
Sbjct: 371 NMYESIGFQGAYLVLGLVALGFTLISVFTLSGPGPLSLLRR 411

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Length = 417

 Score = 46.8 bits (111), Expect = 2e-05
 Identities = 23/247 (9%), Positives = 71/247 (28%), Gaps = 11/247 (4%)

Query: 540 FGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVP----IWKL 595
             G ++    + + +L      +L   +                  ++ +        +L
Sbjct: 157 IVGIMFTINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALEL 216

Query: 596 FMDPYIAVCSGALLMANVALAFLE---PTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGV 652
           F  P +   S  ++  +      +                     G +       +   +
Sbjct: 217 FRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIM 276

Query: 653 VITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALL 712
                +         L++A    +  +      F+TS   +++      F +  +     
Sbjct: 277 FFAPLIINRIGGKNALLLA--GTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCF 334

Query: 713 PTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILY 772
             +    +VR+ +    +         LA     ++AG + ++IGF     ++  + + +
Sbjct: 335 KYITSQFEVRFSATIYLVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGF 392

Query: 773 APVLIYL 779
             + ++ 
Sbjct: 393 TLISVFT 399

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Length = 375

 Score = 68.8 bits (169), Expect = 2e-12
 Identities = 36/176 (20%), Positives = 65/176 (36%), Gaps = 12/176 (6%)

Query: 111 FASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGV 170
             +  + QL    F G + DR+G    +++G+ I  L+T +     S  VL  A ++QG+
Sbjct: 45  LLTYGVSQL----FYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGM 100

Query: 171 GSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKEIPFLI 230
           G+         +  D +    +   A  +    I    L+AP  GG L         +L 
Sbjct: 101 GTGVGGVMARTLPRDLYERT-QLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACYLF 159

Query: 231 LAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDP----YIAVCSGAL 282
           L  +      +   + + + E      P +        LF +     Y+ +  G L
Sbjct: 160 LLVLCAG---VTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIGGL 212

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451

 Score = 65.5 bits (160), Expect = 4e-11
 Identities = 38/357 (10%), Positives = 102/357 (28%), Gaps = 31/357 (8%)

Query: 124 FSGALIDRIGYDLPMMIGLCIMFLSTALFACGR----SYGVLFFARSLQGVGSAFADTSG 179
             G++ DR    + +  GL +                S  V+F    L G          
Sbjct: 81  IMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPC 140

Query: 180 LAMIADRFTEENERSQALGIALAFISFGCLVAPP-FGGALYQFAGKEIPFLILAFVSLLD 238
              +   +++  ER   + +     + G  + P  F   +  F        + AF ++L 
Sbjct: 141 GRTMVHWWSQ-KERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILV 199

Query: 239 GFMLLLVMK------------------PVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSG 280
                 +M+                  P       ++  +   + +  +  +  +   + 
Sbjct: 200 ALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAI 259

Query: 281 ALLMANVALAFLEPTISLWIED----NLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY 336
           A +   +    +      ++++     L   +W   +         +    ++ K+ +  
Sbjct: 260 ANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGN 319

Query: 337 PTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVR 396
                +     + +     + +  + +  + M+ +  I F +      +      L   +
Sbjct: 320 RGATGVFFMTLVTI-ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKK 378

Query: 397 YVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 453
                     +    Y         + G  VD  G+     ++   +IL   +LI +
Sbjct: 379 AAGTAAGFTGLF--GYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 433

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Length = 438

 Score = 63.8 bits (155), Expect = 1e-10
 Identities = 55/363 (15%), Positives = 110/363 (30%), Gaps = 46/363 (12%)

Query: 123 PFSGALIDRIGYDLPMMIGLCIMFLSTALF---ACGRSYGVLFFARSLQGVGSAFADTSG 179
             +G L+ ++ Y   ++ GL +  L  ALF   A   +Y +      +   G    +T+ 
Sbjct: 79  IPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAA 138

Query: 180 LAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALYQFAGKE-------------- 225
              +     E +     L +A  F SFG ++A  FG +L                     
Sbjct: 139 NPFVTVLGPESS-GHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQL 197

Query: 226 ------------IPFLILAFVSLLDGFMLLLVMKP-VKEQLNQKKPESHSTVPIWKLFMD 272
                        P++I+  + LL   +++L   P ++   +    +   +  + +L   
Sbjct: 198 SAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARI 257

Query: 273 PYIAVCSGAL-LMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVK 331
            +      A         A     I   +E+                      G      
Sbjct: 258 RHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTW 317

Query: 332 LAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGM--ALVDTALLPTL 389
           L   +  ++ L     + +  LC           ++ L +C     +    + +  +  L
Sbjct: 318 LISRFAPHKVLAAYALIAM-ALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNL 376

Query: 390 GYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPV 449
           G     +      S   +      +   I   V G + DA G      LI    + +A +
Sbjct: 377 G-----QDTKYGSSFIVMT----IIGGGIVTPVMGFVSDAAGNIPTAELIPA--LCFAVI 425

Query: 450 LIY 452
            I+
Sbjct: 426 FIF 428

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 3e-06
 Identities = 63/415 (15%), Positives = 121/415 (29%), Gaps = 131/415 (31%)

Query: 1   MEAFKA---CWTVVGTLKVPVLNLEVNEVKDIVWEKLQEPKSQRKLILVIVSTALLLD-- 55
            +AF     C  V    K  +L+ E  E+  I+  K  +  S    +        LL   
Sbjct: 26  EDAFVDNFDCKDVQDMPK-SILSKE--EIDHIIMSK--DAVSGTLRLFWT-----LLSKQ 75

Query: 56  -NMLYMVIVPII-PDYLRFIGAWGEEDQLQALNESRYHTK------------PHH--REH 99
             M+   +  ++  +Y   +     E +  ++    Y  +             ++  R  
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135

Query: 100 AEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIG-----LCIMFLSTALFAC 154
                     L   +A+++L   P    LID  G     ++G     + +    +    C
Sbjct: 136 P--------YLKLRQALLEL--RPAKNVLID--G-----VLGSGKTWVALDVCLSYKVQC 178

Query: 155 GRSYGVLFFARSLQGVGSAFADTSGLAM-------IADRFTEENERSQALGIALAFISFG 207
              + + F+      + +  +  + L M       I   +T  ++ S  + + +  I   
Sbjct: 179 KMDFKI-FWLN----LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233

Query: 208 C---LVAPPFGGALYQFAGKEIPFLILAFV---SLLDGFML---LLVM---KPVKEQLNQ 255
               L + P+   L          L+L  V      + F L   +L+    K V + L+ 
Sbjct: 234 LRRLLKSKPYENCL----------LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 256 KKPESHSTVPIWKLFMDP--------YI---------AVCSGALLMANVALAFLEPTISL 298
                 S                   Y+          V +      ++    +   ++ 
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT 343

Query: 299 WIEDNLTTDNWKIGMIWLPAFFPHV----FGVVITVKLAKLYPT-----YQWLMV 344
           W       DNWK           HV       +I   L  L P      +  L V
Sbjct: 344 W-------DNWK-----------HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 2e-05
 Identities = 67/469 (14%), Positives = 128/469 (27%), Gaps = 144/469 (30%)

Query: 220 QFAGKEI-PFLILAFVSLLDGFMLLLVMKPV------KEQLNQKKPESHSTVPIWKLFMD 272
           Q+  K+I      AFV   D   +  + K +         +  K   S +    W L   
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK 74

Query: 273 P---YIAVCSGAL------LMANVALAFLEPTI--SLWIE--DNLTTDNWKIGMIWLPAF 319
                       L      LM+ +     +P++   ++IE  D L  DN          F
Sbjct: 75  QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--------QVF 126

Query: 320 FPHVFGV-------VITVKLAKLYPTYQWL----MVAVG---LVLEGL------CCFIIP 359
             +   V        +   L +L P  + +    ++  G   + L+        C     
Sbjct: 127 AKY--NVSRLQPYLKLRQALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKM--D 181

Query: 360 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG 419
           F   +         +          +L  L  L       +  +  + +D S ++   I 
Sbjct: 182 FKIFW---------LNLKNCNSPETVLEMLQKL----LYQIDPNWTSRSDHSSNIKLRIH 228

Query: 420 PIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYD---FKPFENEANILMADPPKK 476
            I A           L  L    +  Y   L+ L N+ +   +  F     IL+      
Sbjct: 229 SIQA----------ELRRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL------ 270

Query: 477 EYQTYTMQDRQPVANDYKNHL--EYSMQETSI----DENKQPAANVGTNGVSNPFKASAP 530
                T + +Q V +          S+   S+    DE K          +    +    
Sbjct: 271 -----TTRFKQ-VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY----LDCRPQDL-- 318

Query: 531 STGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLL----------VMKPVKEQLN 580
              P E                P  +      +   +             +   ++  LN
Sbjct: 319 ---PRE-----------VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN 364

Query: 581 QKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTIS-LWIED 628
             +P  +      K+F    ++V        +  +      +S +W + 
Sbjct: 365 VLEPAEYR-----KMFDR--LSV-----FPPSAHIP--TILLSLIWFDV 399

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 7e-05
 Identities = 53/336 (15%), Positives = 97/336 (28%), Gaps = 96/336 (28%)

Query: 546 QFAGKEI-PFLILAFVSLLDGFMLLLVMKPV------KEQLNQKKPESHSTVPIWKLFMD 598
           Q+  K+I      AFV   D   +  + K +         +  K   S +    W L   
Sbjct: 15  QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK 74

Query: 599 P---YIAVCSGAL------LMANVALAFLEPTI--SLWIE--DNLTTDNWKIGMIWLPAF 645
                       L      LM+ +     +P++   ++IE  D L  DN          F
Sbjct: 75  QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN--------QVF 126

Query: 646 FPHVFGV-------VITVKLAKLYPTYQWL----MVAVG---LVLEGL------CCFIIP 685
             +   V        +   L +L P  + +    ++  G   + L+        C     
Sbjct: 127 AKY--NVSRLQPYLKLRQALLELRPA-KNVLIDGVLGSGKTWVALDVCLSYKVQCKM--D 181

Query: 686 FSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIG 745
           F   +         +          +L  L  L       +  +  + +D S ++   I 
Sbjct: 182 FKIFW---------LNLKNCNSPETVLEMLQKL----LYQIDPNWTSRSDHSSNIKLRIH 228

Query: 746 PIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYD---FKPFENEANILMADPPKK 802
            I A           L  L    +  Y   L+ L N+ +   +  F     IL+      
Sbjct: 229 SIQA----------ELRRL--LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILL------ 270

Query: 803 EYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQP 838
                T + +Q V +        +    S+D +   
Sbjct: 271 -----TTRFKQ-VTDFLSA---ATTTHISLDHHSMT 297

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	871
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	100.0
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	100.0
1pw4_A	451	Glycerol-3-phosphate transporter; transmembrane, i	99.98
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.97
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.97
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.97
3o7q_A	438	L-fucose-proton symporter; transporter, multi-PASS	99.96
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.96
4aps_A	491	DI-OR tripeptide H+ symporter; transport protein,	99.96
2xut_A	524	Proton/peptide symporter family protein; transport	99.94
2cfq_A	417	Lactose permease; transport, transport mechanism,	99.94
2gfp_A	375	EMRD, multidrug resistance protein D; membrane pro	99.93
2xut_A	524	Proton/peptide symporter family protein; transport	99.9
4gc0_A	491	D-xylose-proton symporter; MFS, transport protein;	99.9

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=100.00  E-value=1e-35  Score=337.16  Aligned_cols=381  Identities=11%  Similarity=0.018  Sum_probs=314.6

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      +++.+..++++.++..++.....+.+|.+.+++ .                           +..+.|++.+++.++..+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------s~~~~g~~~~~~~~~~~~   77 (451)
T 1pw4_A           26 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQG-F---------------------------SRGDLGFALSGISIAYGF   77 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHHHHHHHTTSST-T---------------------------CSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c---------------------------cHhHHHHHHHHHHHHHHH
Confidence            456677788888888888888889989888776 5                           788999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFAC----GRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~----a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      +++++|+++||+|||++++++.++.+++.+++++    +++++.++++|+++|++.+...+...+++.|++ |+++|+++
T Consensus        78 ~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~  156 (451)
T 1pw4_A           78 SKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGI  156 (451)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTC-TTTHHHHH
T ss_pred             HHHhHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHHHHHHC-CchhhhHH
Confidence            9999999999999999999999999999999999    999999999999999999999999999999997 66899999


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhC-ChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC----------------
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAG-KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE----------------  259 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~g-wr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~----------------  259 (871)
                      +++.+.+..+|.++||.+++++.+.+| ||++|++.+++.++..++.+++.||.++..+.++.+                
T Consensus       157 ~~~~~~~~~~g~~~g~~~~~~l~~~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (451)
T 1pw4_A          157 VSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQ  236 (451)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCChhhhcccccccchhhhhc
Confidence            999999999999999999999989898 999999999998887777777777755432111100                


Q ss_pred             CCcccc--hhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-
Q psy17194        260 SHSTVP--IWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-  336 (871)
Q Consensus       260 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-  336 (871)
                      +....+  .++.+|+|.++...+..++..........++|.|+++.+|.+..+.+++.+...++.+++.++.+++.||+ 
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~  316 (451)
T 1pw4_A          237 ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF  316 (451)
T ss_dssp             --CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ccccccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            000111  35677889999888888888888888899999999888999999999999999999999999999999999 


Q ss_pred             -CchhHHHHHHHHHHHH-HHHHHhhcch--hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHH
Q psy17194        337 -PTYQWLMVAVGLVLEG-LCCFIIPFST--SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISY  412 (871)
Q Consensus       337 -g~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~  412 (871)
                       ++|+.+  ..+..+.. ++.+++.+.+  +.+...+..++.|++.+...+...   ....+..|+++||+++|+.+...
T Consensus       317 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~  391 (451)
T 1pw4_A          317 RGNRGAT--GVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIG---LHALELAPKKAAGTAAGFTGLFG  391 (451)
T ss_dssp             TTCHHHH--HHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHH---HHHHHTSCTTHHHHHHHHHHHHH
T ss_pred             cCCchhH--HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHH---HHHHHHhchhhhhhHHHHHHHHH
Confidence             888754  34443333 5555555553  555566666666776666533333   33445556689999999999999


Q ss_pred             HH-HHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        413 SL-AYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       413 ~l-g~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      .+ |..++|.+.|.+.+..||+..|++.+++.+++.++.++..+
T Consensus       392 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  435 (451)
T 1pw4_A          392 YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI  435 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99 99999999999999999999999988888777666555443

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=100.00  E-value=1.1e-34  Score=327.14  Aligned_cols=371  Identities=14%  Similarity=0.135  Sum_probs=300.7

Q ss_pred             cccchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHH
Q psy17194         39 SQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQ  118 (871)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~  118 (871)
                      ++++..+..+++..++..++.....+++|.+.+++|.                           +..+.|++.+++.+++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~   74 (438)
T 3o7q_A           22 RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL---------------------------TNFQAGLIQSAFYFGY   74 (438)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---------------------------CSHHHHHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC---------------------------CHHHHHHHHHHHHHHH
Confidence            3445566777788888888889999999999999876                           8899999999999999


Q ss_pred             HHhhhhhhHhhhhhCCchHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHH
Q psy17194        119 LMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALF---ACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQ  195 (871)
Q Consensus       119 ~~~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~---~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~  195 (871)
                      .++.+++|+++||+|||++++++.++.+++.+++   +++++++.++++|+++|++.+...+...++++|++ |+++|++
T Consensus        75 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~  153 (438)
T 3o7q_A           75 FIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG-PESSGHF  153 (438)
T ss_dssp             HTTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-CSTTHHH
T ss_pred             HHHHHhHHHHHHHhcchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHHHHHHc-CchhHHH
Confidence            9999999999999999999999999999999999   88899999999999999999999999999999997 6689999


Q ss_pred             HHHHHHHHHHHHHHHhHHHHHHHH-hhhC-------------------------ChhHHHHHHHHHHHHHHHHHHhc-cc
Q psy17194        196 ALGIALAFISFGCLVAPPFGGALY-QFAG-------------------------KEIPFLILAFVSLLDGFMLLLVM-KP  248 (871)
Q Consensus       196 ~~g~~~~~~~~G~~lg~~l~~~l~-~~~g-------------------------wr~~f~~~~~~~l~~~i~~~~~~-~~  248 (871)
                      ++++.+...++|.++||.+++.+. +..+                         ||++|++.+++.++..++.++.. ||
T Consensus       154 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~  233 (438)
T 3o7q_A          154 RLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPA  233 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTHHHHTSSCCCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence            999999999999999999999998 5544                         99999888877776665544432 22


Q ss_pred             chhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhCCCchhHHHHHHhhHHhHHHHHH
Q psy17194        249 VKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLW-IEDNLTTDNWKIGMIWLPAFFPHVFGVV  327 (871)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~s~~~~g~~~~~~~~~~~~~~~  327 (871)
                      .+++.++++++++.....++++|+|.++...+..++..........++|.| +++.+|.+..+.++..+...++.+++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  313 (438)
T 3o7q_A          234 LQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRF  313 (438)
T ss_dssp             CTTTCCCCSSTTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHHHHHHHHHH
Confidence            222211222222333566788899999998888888888888888999999 8888899999999999999999999999


Q ss_pred             HHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH
Q psy17194        328 ITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI  407 (871)
Q Consensus       328 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi  407 (871)
                      +.+++.||+|+|+.+  ..+..+..++.++..+.++.+..+ ..++.+++.+...+..   .....+..|++ ++++.++
T Consensus       314 ~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~  386 (438)
T 3o7q_A          314 TGTWLISRFAPHKVL--AAYALIAMALCLISAFAGGHVGLI-ALTLCSAFMSIQYPTI---FSLGIKNLGQD-TKYGSSF  386 (438)
T ss_dssp             HHHHHHHHSCHHHHH--HHHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHTTHHHHH---HHHHHSSCGGG-HHHHHHH
T ss_pred             HHHHHHHHhcchHHH--HHHHHHHHHHHHHHHHcCCcHHHH-HHHHHHHHHHHHHHHH---HHHHHhhcccc-ccchhhH
Confidence            999999999999855  556666666666666666655433 3466677766654333   33334555544 8888887


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhC-hhhHHHHHHHHHHH
Q psy17194        408 ADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNIL  445 (871)
Q Consensus       408 ~~~~~~lg~~igp~l~g~l~~~~g-~~~~f~~~~~~~~~  445 (871)
                      .. ...+|.+++|.+.|.+.|..| ++..|++.+++.++
T Consensus       387 ~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~  424 (438)
T 3o7q_A          387 IV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV  424 (438)
T ss_dssp             HH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence            77 667999999999999999999 99998876554443

>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1

Probab=99.98  E-value=1.6e-30  Score=294.28  Aligned_cols=396  Identities=11%  Similarity=0.022  Sum_probs=288.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEG  352 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~  352 (871)
                      +.+.......+........+.+.+|.+. +++ .+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+.++.+
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l--~~~~~~~~  103 (451)
T 1pw4_A           28 QIFLGIFFGYAAYYLVRKNFALAMPYLV-EQG-FSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILAA  103 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHTSHHHHHHHTT-SST-TCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-ccHhHHHHHHHHHHHHHHHHHHhHHHHHHhcCchHHH--HHHHHHHH
Confidence            3444444455555555555566666654 446 8999999999999999999999999999999999955  77888888


Q ss_pred             HHHHHhhc----chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        353 LCCFIIPF----STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       353 ~~~~~~~~----~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~  428 (871)
                      ++.+++++    +++.+.+++.+++.|++.+...+...+.   +.+..|+++|++++++.+....+|..++|.+++.+.+
T Consensus       104 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~  180 (451)
T 1pw4_A          104 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT---MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA  180 (451)
T ss_dssp             HHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHH---HHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccHHHHHHHHHHHHHHhhhccchHHHH---HHHHCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            88888888    8889999999999999999875555444   4444566999999999999999999999999999999


Q ss_pred             hhC-hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccC
Q psy17194        429 AIG-FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSID  507 (871)
Q Consensus       429 ~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  507 (871)
                      ..| |++.|++.+++.++..++.++..+..++....++         .++.+.     ..+  .      +.   ++   
T Consensus       181 ~~g~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-----~~~--~------~~---~~---  232 (451)
T 1pw4_A          181 WFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPP---------IEEYKN-----DYP--D------DY---NE---  232 (451)
T ss_dssp             HTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCS---------CTTTCC-----C---------------------
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHHhhccCCHhhcCCCC---------hhhhcc-----ccc--c------cc---hh---
Confidence            999 9999999888777665554433321111000000         000000     000  0      00   00   


Q ss_pred             CCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCC
Q psy17194        508 ENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESH  587 (871)
Q Consensus       508 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  587 (871)
                           +  . +                                                                ++...
T Consensus       233 -----~--~-~----------------------------------------------------------------~~~~~  240 (451)
T 1pw4_A          233 -----K--A-E----------------------------------------------------------------QELTA  240 (451)
T ss_dssp             ------------------------------------------------------------------------------CC
T ss_pred             -----h--h-h----------------------------------------------------------------ccccc
Confidence                 0  0 0                                                                00000


Q ss_pred             cccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhcc--Cch
Q psy17194        588 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLY--PTY  665 (871)
Q Consensus       588 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~--~~~  665 (871)
                      .....++++++|.++...+..++.+...+.+..++|.|+++.+|+++.+.|+++....++.+++.++.|++.||+  ++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  320 (451)
T 1pw4_A          241 KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR  320 (451)
T ss_dssp             THHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCH
T ss_pred             ccchHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            000136788999999999999999999999999999999888999999999999999999999999999999999  877


Q ss_pred             hhHHHHHHHHHHh-hHHhhhcch--hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHH-H
Q psy17194        666 QWLMVAVGLVLEG-LCCFIIPFS--TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL-A  741 (871)
Q Consensus       666 ~~~~~~~g~~~~~-~~l~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~-g  741 (871)
                      +  ....+..+.. ++++.+.+.  .+.+...+.+++.|++.+...+....   ...+..|++.+|+++|+++++.++ |
T Consensus       321 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~g  395 (451)
T 1pw4_A          321 G--ATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGL---HALELAPKKAAGTAAGFTGLFGYLGG  395 (451)
T ss_dssp             H--HHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHHH---HHHHTSCTTHHHHHHHHHHHHHHHHH
T ss_pred             h--hHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHhchHHHHHH---HHHHHhchhhhhhHHHHHHHHHHHHH
Confidence            6  3334444433 555555543  34555556666677766655443333   344444578899999999999999 9


Q ss_pred             HhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        742 YAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       742 ~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      +.++|.+.|.+.|..|++..|.+.+++.+++.++.++.+
T Consensus       396 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~  434 (451)
T 1pw4_A          396 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  434 (451)
T ss_dssp             HHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999888888776555543

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.97  E-value=4.2e-32  Score=299.38  Aligned_cols=359  Identities=16%  Similarity=0.186  Sum_probs=291.4

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ..+++..++..+......+.+|.+.+++|.                           ++.+.|++.+++.++..+++++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---------------------------s~~~~g~~~~~~~~~~~~~~~~~   55 (375)
T 2gfp_A            3 LMLVLLVAVGQMAQTIYIPAIADMARDLNV---------------------------REGAVQSVMGAYLLTYGVSQLFY   55 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSSS---------------------------TTHHHHHHHHHHHHHHHHHHTTH
T ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHcCC---------------------------CHHHHHHHHHHHHHHHHHHHHHH
Confidence            456777788888899999999999888765                           88999999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHHHHHHHH
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFIS  205 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~~~~~~~  205 (871)
                      |+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++ |+++|++++++.+....
T Consensus        56 g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  134 (375)
T 2gfp_A           56 GPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLY-ERTQLRHANSLLNMGIL  134 (375)
T ss_dssp             HHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTSSCCSHHHHHHHHHH
T ss_pred             HHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHC-CHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999987 56899999999999999


Q ss_pred             HHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhhcchhHHHHHHHHHHH
Q psy17194        206 FGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMA  285 (871)
Q Consensus       206 ~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (871)
                      +|..++|.+++++.+.+|||+.|++.+++.++..+...+..||++++.+   ++++...+.++.+|+|.++......++.
T Consensus       135 ~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (375)
T 2gfp_A          135 VSPLLAPLIGGLLDTMWNWRACYLFLLVLCAGVTFSMARWMPETRPVDA---PRTRLLTSYKTLFGNSGFNCYLLMLIGG  211 (375)
T ss_dssp             HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHCCCCCSSCCCSTTTC---CCCCTTTCSTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHCcccCCCCc---ccccHHHHHHHHhcCcchHHHHHHHHHH
Confidence            9999999999999998899999999988887766655555665443322   2223344567788899998888888888


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH-HHHHHHHHHhhc--ch
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL-VLEGLCCFIIPF--ST  362 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~-~~~~~~~~~~~~--~~  362 (871)
                      .........+.|.|+++.+|.++.+.+++.+...++.+++.++.+++.||++++. . ..... ...++..+....  .+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~  289 (375)
T 2gfp_A          212 LAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-W-QSVICCLLAGLLMWIPDWFGVM  289 (375)
T ss_dssp             HHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHHHH-H-HHHHHHHHTSSSSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHhhhccc
Confidence            8888888888899988888999999999999999999999999999999988622 1 11111 111111112222  12


Q ss_pred             hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHH
Q psy17194        363 SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAF  441 (871)
Q Consensus       363 ~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~  441 (871)
                      +.+..++..++.+++.+...+.......   +..| ++||++.|+.+....+|..++|.+.|.+.+..++...+++.++
T Consensus       290 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~---~~~p-~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~  364 (375)
T 2gfp_A          290 NVWTLLVPAALFFFGAGMLFPLATSGAM---EPFP-FLAGTAGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLM  364 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSSTTHHHHH---THHH-HHHHHHHHHHHHHHHHHHHCCSTTCTHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhhHHHHHHHH---HhCC-cccchHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHH
Confidence            5555566677778888776444444433   3344 7899999999999999999999999999988888877776443

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.97  E-value=3.4e-30  Score=295.15  Aligned_cols=386  Identities=15%  Similarity=0.137  Sum_probs=281.2

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVN  122 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~  122 (871)
                      +.+..+++..+...+......+.++.+.++.-                     ..++++.+..+.|++.+++.++..+++
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~s~~~~~~~~~~~~~~~~~~~   71 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLI---------------------STGDLHITRATAASIMAIYASMVYLSG   71 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHTSCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------chhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            34455666667777777766677777776510                     011235599999999999999999999


Q ss_pred             hhhhHhhhh-hCCchHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhh--HHHHHHH
Q psy17194        123 PFSGALIDR-IGYDLPMMIGLCIMFLSTALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENE--RSQALGI  199 (871)
Q Consensus       123 ~~~G~l~Dr-~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~--r~~~~g~  199 (871)
                      +++|+++|| +|||+++..+.++.+++.+++++++|++.++++|+++|++.+...+...++++|++ |+++  |++++++
T Consensus        72 ~~~g~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~  150 (491)
T 4aps_A           72 TIGGFVADRIIGARPAVFWGGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTLY-DEHDRRRDAGFSI  150 (491)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SSCTTHHHHHHHH
T ss_pred             HHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHHHHc-CcccccceeeehH
Confidence            999999999 89999999999999999999999999999999999999999999999999999997 4566  7889999


Q ss_pred             HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccch-------------
Q psy17194        200 ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPI-------------  266 (871)
Q Consensus       200 ~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  266 (871)
                      ++...++|..+||.+++.+.+..|||++|++.++..++..++.++..++..++..++++++......             
T Consensus       151 ~~~~~~~g~~~~~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~  230 (491)
T 4aps_A          151 FVFGINLGAFIAPLIVGAAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYLRPTDPLAPEEVKPLLVKVSLAVAG  230 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCSCCSCCCSHHHHHHHHHHCCCCCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhCcccccccccCCCCccccchhHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999888777666655544332211111010000000000             


Q ss_pred             ----------------------------------------------hhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy17194        267 ----------------------------------------------WKLFMDPYIAVCSGALLMANVALAFLEPTISLWI  300 (871)
Q Consensus       267 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  300 (871)
                                                                    .+..+....+......++...........++.|.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (491)
T 4aps_A          231 FIAIIVVMNLVGWNSLPAYINLLTIVAIAIPVFYFAWMISSVKVTSTEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFA  310 (491)
T ss_dssp             HHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHC------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHH
T ss_pred             HHHHHHHHHhccCcccccchhhhhHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence                                                          0000111233444444455555566677788888


Q ss_pred             HHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHH---HHHHHHHHHHHHHHHhhcch---------hhHHHH
Q psy17194        301 EDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWL---MVAVGLVLEGLCCFIIPFST---------SYQMLM  368 (871)
Q Consensus       301 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~---~~~~~~~~~~~~~~~~~~~~---------~~~~l~  368 (871)
                      ++.++.+....++..+...++..++.++.+++.||++||+..   .+..+..+.+++.+++....         +.+..+
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  390 (491)
T 4aps_A          311 AERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTAWKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLV  390 (491)
T ss_dssp             HHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHHTTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHH
T ss_pred             HHHhccCccCHHHHhccchHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHH
Confidence            887888767777888888888999999999999999987532   12355555556655554422         555666


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHH
Q psy17194        369 LPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAP  448 (871)
Q Consensus       369 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~  448 (871)
                      +..++.+++.+...+....   ...+..|++.||++.|+.+....+|.+++|.+.+.+.+ .++.+.|++.+++.++..+
T Consensus       391 ~~~~l~g~~~~~~~~~~~~---~~~~~~p~~~~g~~~g~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  466 (491)
T 4aps_A          391 GSWALVILGEMLISPVGLS---VTTKLAPKAFNSQMMSMWFLSSSVGSALNAQLVTLYNA-KSEVAYFSYFGLGSVVLGI  466 (491)
T ss_dssp             HHHHHHHHHHHTTTTHHHH---HHHHHTTTTCSSSSTHHHHHHHHHHHHHHHHHGGGGGG-SSTTHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHH---HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHH
Confidence            6677778887776444433   34455666999999999999999999999999988765 4777888887777766665


Q ss_pred             HHHHHh
Q psy17194        449 VLIYLK  454 (871)
Q Consensus       449 ~~~~~~  454 (871)
                      +.++..
T Consensus       467 ~~~~~~  472 (491)
T 4aps_A          467 VLVFLS  472 (491)
T ss_dssp             HHHHC-
T ss_pred             HHHHHH
Confidence            555443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.97  E-value=2.3e-28  Score=279.93  Aligned_cols=390  Identities=14%  Similarity=0.030  Sum_probs=268.5

Q ss_pred             HHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhhhh
Q psy17194         46 VIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFS  125 (871)
Q Consensus        46 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~~~  125 (871)
                      ++.+++.++.+++.+.++..+|.+.++++.....                   ..+.+..+.|++.+++.++.+++++++
T Consensus        15 ~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~g~~~s~~~~G~~iG~~~~   75 (491)
T 4gc0_A           15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNL-------------------SESAANSLLGFCVASALIGCIIGGALG   75 (491)
T ss_dssp             HHHHHHHHHHHHHHHGGGGTHHHHHHHHTGGGCC-------------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-------------------CcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3446677888999999999999999887541111                   113366789999999999999999999


Q ss_pred             hHhhhhhCCchHHHHHHHHHHHHHHHHH------------------hhhhHHHHHHHHHHHHhhhhhhhhhHHHHhhccc
Q psy17194        126 GALIDRIGYDLPMMIGLCIMFLSTALFA------------------CGRSYGVLFFARSLQGVGSAFADTSGLAMIADRF  187 (871)
Q Consensus       126 G~l~Dr~Grr~~l~~~~~~~~i~~~l~~------------------~a~s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~  187 (871)
                      |+++||+|||++++++.+++.++.++++                  +++|++.++++|+++|++.|...+...++++|+.
T Consensus        76 G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~  155 (491)
T 4gc0_A           76 GYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELA  155 (491)
T ss_dssp             HHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999998                  4789999999999999999999999999999985


Q ss_pred             CChhhHHHHHHHHHHHHHHHHHHhHHHHHHHHhh--------hCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC
Q psy17194        188 TEENERSQALGIALAFISFGCLVAPPFGGALYQF--------AGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE  259 (871)
Q Consensus       188 ~~~~~r~~~~g~~~~~~~~G~~lg~~l~~~l~~~--------~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~  259 (871)
                       |+++|++..++.+.+..+|.++++.++..+...        .+||..+.+..+..++.. +..+..||+|+....+.+.
T Consensus       156 -p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~peSp~~L~~~~~~  233 (491)
T 4gc0_A          156 -PAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFL-MLLYTVPESPRWLMSRGKQ  233 (491)
T ss_dssp             -CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHH-HHGGGSCCCHHHHHHTTCH
T ss_pred             -CHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhh-hhhhcCCCChHHHHHcCch
Confidence             779999999999999999999999998877643        247777777766665544 3445566665321111110


Q ss_pred             C-----------------------------CcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchh
Q psy17194        260 S-----------------------------HSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWK  310 (871)
Q Consensus       260 ~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~  310 (871)
                      +                             +........++.+..........+..........++..++.+..+.+...
T Consensus       234 ~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (491)
T 4gc0_A          234 EQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDI  313 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSSCCHHH
T ss_pred             hHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhhhHHHHhcccHHHHHHHHHHHHHHhhhhHHHhcchHHHHhcCCCccc
Confidence            0                             00001111223333333333333333332223333344455556777777


Q ss_pred             HHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc----hhhHHHHHHHHHHHHHHhhhhhhhh
Q psy17194        311 IGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----TSYQMLMLPICGICFGMALVDTALL  386 (871)
Q Consensus       311 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~l~g~g~~~~~~~~~  386 (871)
                      .........+...++.++.+++.||+|||+.+  ..+.....++++.++..    .+.+..++..++...+.+...  ..
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  389 (491)
T 4gc0_A          314 ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ--IIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSW--GP  389 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHH--HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTT--TH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcCcchh--ccchHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHH--HH
Confidence            77777777888899999999999999999965  44444444444333221    111222222232322322221  11


Q ss_pred             hhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHh------hhChhhHHHHHHHHHHHHHHHH-HHHhhcccC
Q psy17194        387 PTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVD------AIGFTALNFLIAFMNILYAPVL-IYLKNIYDF  459 (871)
Q Consensus       387 ~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~------~~g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~  459 (871)
                      ....+..|.+|.+.|+++.|+.+....+++++++.+.+.+.+      ..++...|++.++++++..+.. ++++|++.+
T Consensus       390 ~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~  469 (491)
T 4gc0_A          390 VCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGK  469 (491)
T ss_dssp             HHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTC
T ss_pred             HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCCCC
Confidence            223345567788999999999999999999999988776643      3466778888888777776654 455665544


Q ss_pred             C
Q psy17194        460 K  460 (871)
Q Consensus       460 ~  460 (871)
                      +
T Consensus       470 t  470 (491)
T 4gc0_A          470 T  470 (491)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A*

Probab=99.96  E-value=1.4e-27  Score=269.08  Aligned_cols=367  Identities=13%  Similarity=0.055  Sum_probs=272.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q psy17194        276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCC  355 (871)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~  355 (871)
                      ..+....+...+......+..|. +++++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+  ..+..+.+++.
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l--~~~~~~~~~~~  105 (438)
T 3o7q_A           29 ALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGI--ITGLFLYALGA  105 (438)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HHHHSCCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHSCHHHHH--HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchHHH--HHHHHHHHHHH
Confidence            33444444455555566666666 5677999999999999999999999999999999999999965  77777788888


Q ss_pred             HHh---hcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH-hhhC
Q psy17194        356 FII---PFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV-DAIG  431 (871)
Q Consensus       356 ~~~---~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~-~~~g  431 (871)
                      +++   .+.++.+.+++.+++.|++.+...+...+.   +.+..|+++|++++++.+....+|..++|.+++.+. +..+
T Consensus       106 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~  182 (438)
T 3o7q_A          106 ALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPF---VTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP  182 (438)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHSSCSTTHHHHHHHHHHHHHHHHHHHHHHTTHHHHTSSC
T ss_pred             HHHHhccccccHHHHHHHHHHHHhhHHHhhhhHHHH---HHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            777   778899999999999999999885555444   444556699999999999999999999999999998 5554


Q ss_pred             -------------------------hhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccc
Q psy17194        432 -------------------------FTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDR  486 (871)
Q Consensus       432 -------------------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  486 (871)
                                               |++.|++.+++.++..++.++.+..+.  +   +         ++       ++ 
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~p~~--~---~---------~~-------~~-  240 (438)
T 3o7q_A          183 HQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPAL--Q---S---------DN-------HS-  240 (438)
T ss_dssp             CCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--T---T---------TC-------CC-
T ss_pred             cccccccccCCcchhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCCcc--c---c---------cc-------cc-
Confidence                                     899988777666555444333211000  0   0         00       00 


Q ss_pred             ccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHH
Q psy17194        487 QPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGF  566 (871)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~  566 (871)
                      +++                                                                             
T Consensus       241 ~~~-----------------------------------------------------------------------------  243 (438)
T 3o7q_A          241 DAK-----------------------------------------------------------------------------  243 (438)
T ss_dssp             CSS-----------------------------------------------------------------------------
T ss_pred             ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             HHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHH-HHHhcCCCccchhhhhhccc
Q psy17194        567 MLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLW-IEDNLTTDNWKIGMIWLPAF  645 (871)
Q Consensus       567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~-l~~~~g~s~~~~gl~~~~~~  645 (871)
                                        ..+.+.++++++++|.++...+..++.....+....++|.| +++.+|+++.+.|+++....
T Consensus       244 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  305 (438)
T 3o7q_A          244 ------------------QGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM  305 (438)
T ss_dssp             ------------------TTSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHH
T ss_pred             ------------------ccchhhhHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCcchhHHHHHHHHHH
Confidence                              00001134778899999999988888888888999999999 88888999999999999999


Q ss_pred             hhhhhhhhhhhhhhhccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhcccc
Q psy17194        646 FPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVS  725 (871)
Q Consensus       646 ~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  725 (871)
                      ++.+++.++.|++.||+++|+  ....+..+.+++++++.+.++.+. +..++..+++.+...+...+   ...+..++ 
T Consensus       306 ~~~~~~~~~~g~l~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~---~~~~~~~~-  378 (438)
T 3o7q_A          306 VCFFIGRFTGTWLISRFAPHK--VLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFS---LGIKNLGQ-  378 (438)
T ss_dssp             HHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHTTHHHHHHH---HHHSSCGG-
T ss_pred             HHHHHHHHHHHHHHHHhcchH--HHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHHHHHHH---HHHhhccc-
Confidence            999999999999999999887  555666666666666655544433 33345556665655443333   33444434 


Q ss_pred             ccchHHhHHHHHHHHHHhHhhhhHHHhHhhhC-hHHHHHHHHHHHHHHH
Q psy17194        726 VYGSIYAIADISYSLAYAIGPIVAGGIVDAIG-FTALNFLIAFMNILYA  773 (871)
Q Consensus       726 ~~g~a~g~~~~~~~~g~~~gp~~~g~l~~~~g-~~~~~~~~a~~~~~~~  773 (871)
                      +++.+.++.+ ...+|+.++|.+.|.+.|..| ++..|.+.+++.++..
T Consensus       379 ~~~~~~~~~~-~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~  426 (438)
T 3o7q_A          379 DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF  426 (438)
T ss_dssp             GHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHTSSGGGGHHHHHHHHHHH
T ss_pred             cccchhhHHH-HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence            3788888877 677999999999999999999 9998887655544433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.96  E-value=7.3e-29  Score=277.25  Aligned_cols=373  Identities=14%  Similarity=0.195  Sum_probs=255.5

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      +..+....++..+......|.+|.+.++ +|.                           ++.+.|++.+++.+++.++++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---------------------------s~~~~g~~~~~~~~~~~i~~~   61 (417)
T 2cfq_A            9 FWMFGLFFFFYFFIMGAYFPFFPIWLHDINHI---------------------------SKSDTGIIFAAISLFSLLFQP   61 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCC---------------------------CTTTSHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------------------------CHHHHHHHHHHHHHHHHHHHH
Confidence            3445555566666677778999998765 444                           888999999999999999999


Q ss_pred             hhhHhhhhhCCchHHHHHHHHHHHHH---HHHHhhhhHH-HHHHHHHHHHhhhhhhhhhHHHHhhcccCCh--hhHHHHH
Q psy17194        124 FSGALIDRIGYDLPMMIGLCIMFLST---ALFACGRSYG-VLFFARSLQGVGSAFADTSGLAMIADRFTEE--NERSQAL  197 (871)
Q Consensus       124 ~~G~l~Dr~Grr~~l~~~~~~~~i~~---~l~~~a~s~~-~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~--~~r~~~~  197 (871)
                      ++|+++||+|||++++++.++.+++.   ..+.+++... .++..+++.|++.+...+...+.+.++. ++  ++++..+
T Consensus        62 ~~G~lsDr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~  140 (417)
T 2cfq_A           62 LFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFI-EKVSRRSNFEF  140 (417)
T ss_dssp             HHHHHHTTSTTCCHHHHHHHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHHHHHHHH-HHHHHHHTCCH
T ss_pred             HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-HHhhhhcccch
Confidence            99999999999999999888776532   2122332221 2445667777666655544444444442 22  3556677


Q ss_pred             HHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCC-----CCCCcccchhhhhcc
Q psy17194        198 GIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK-----PESHSTVPIWKLFMD  272 (871)
Q Consensus       198 g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  272 (871)
                      +.......+|..++|.+++++.+ .+||+.|++.++..++..+..++..||+++..++++     +++....+.++++|+
T Consensus       141 g~~~~~~~~g~~~~~~l~~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (417)
T 2cfq_A          141 GRARMFGCVGWALGASIVGIMFT-INNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQ  219 (417)
T ss_dssp             HHHSSSTTTHHHHHHHHHHHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCCCCSCSSCSSSSSSSCCCCCCHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-hchhHHHHHHHHHHHHHHHHHHHcCcccccccccccccccccccccHHHHHHHhcC
Confidence            88888889999999999999887 589999998777655444433333333321111000     001111234567888


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC---CchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLTT---DNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLV  349 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~  349 (871)
                      |.++......+.....+.....++|.|+.+.++.   +....++..+...++.+++.++.++++||+|+|+.+  ..+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~l--~~~~~  297 (417)
T 2cfq_A          220 PKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNAL--LLAGT  297 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH--HHHHH
T ss_pred             CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcHHHHH--HHHHH
Confidence            8887766555544445555556678888766542   234557777777788888999999999999999855  55666


Q ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHh
Q psy17194        350 LEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYSLAYAIGPIVAGGIVD  428 (871)
Q Consensus       350 ~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi-~~~~~~lg~~igp~l~g~l~~  428 (871)
                      +.+++.+...+.++.+.+++..++.+++.+...+   .......+.+|++.||++.++ .+....+|.+++|.++|.+.+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~p~~~~g~~~g~~~~~~~~lg~~~gp~l~G~l~~  374 (417)
T 2cfq_A          298 IMSVRIIGSSFATSALEVVILKTLHMFEVPFLLV---GCFKYITSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMYE  374 (417)
T ss_dssp             HHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHH---HHHHHHHHHSCHHHHHHHHHHHHTTTHHHHHHHHTHHHHTHHH
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHHHhhhhHHHHHH
Confidence            6666666666666666665555555655544322   223445556677999999999 488889999999999999999


Q ss_pred             hhChhhHHHHHHHHHHHHHHHHH
Q psy17194        429 AIGFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       429 ~~g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      ..|++..|.+.+++.+++.++.+
T Consensus       375 ~~g~~~~f~~~~~~~l~~~~~~~  397 (417)
T 2cfq_A          375 SIGFQGAYLVLGLVALGFTLISV  397 (417)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCcHHHHHHHHHHHHHHHHHHH
Confidence            98999999888877776665543

>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus}

Probab=99.96  E-value=7.7e-26  Score=258.90  Aligned_cols=437  Identities=12%  Similarity=0.008  Sum_probs=288.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhh-cCchhHHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDN-----LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL-YPTYQWLMVAV  346 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~  346 (871)
                      +.++......++..+.+.....+++.|+++.     +|.+..+.+++.+.+.++..++.++.|+++|| +|||+.+  ..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~g~r~~~--~~   90 (491)
T 4aps_A           13 LGLSTLFMTEMWERFSYYGMRAILLYYMWFLISTGDLHITRATAASIMAIYASMVYLSGTIGGFVADRIIGARPAV--FW   90 (491)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH--HH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHH--HH
Confidence            3556666677777778888888999999988     99999999999999999999999999999999 8999955  77


Q ss_pred             HHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccc--hhhHHHHHHHHHHHHHHHHHHHHH
Q psy17194        347 GLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSV--YGSIYAIADISYSLAYAIGPIVAG  424 (871)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~--rg~a~gi~~~~~~lg~~igp~l~g  424 (871)
                      +..+.+++.++++++++.+.+++.+++.|++.+...+.......+.   +|+++  |+.++++.+....+|..++|.+++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~  167 (491)
T 4aps_A           91 GGVLIMLGHIVLALPFGASALFGSIILIIIGTGFLKPNVSTLVGTL---YDEHDRRRDAGFSIFVFGINLGAFIAPLIVG  167 (491)
T ss_dssp             HHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH---SSSCTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccchHHHHHHHH---cCcccccceeeehHHHHHHHHHHHHHHHHHH
Confidence            8888888888888999999999999999999998865555555444   44466  788899899999999999999999


Q ss_pred             HHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCccccccccccccccccccccccccc
Q psy17194        425 GIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQET  504 (871)
Q Consensus       425 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (871)
                      .+.+..||++.|++.++..++.+++.++..+...+++.+         .+++.   ..       .++.++..+.     
T Consensus       168 ~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~---~~-------~~~~~~~~~~-----  223 (491)
T 4aps_A          168 AAQEAAGYHVAFSLAAIGMFIGLLVYYFGGKKTLDPHYL---------RPTDP---LA-------PEEVKPLLVK-----  223 (491)
T ss_dssp             HHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCS---------CCSCC---CS-------HHHHHHHHHH-----
T ss_pred             HHHhhhhHHHHHHHHHHHHHHHHHHHHHhCccccccccc---------CCCCc---cc-------cchhHHHHHH-----
Confidence            999999999999998777666655554443211110000         00000   00       0000000000     


Q ss_pred             ccCCCcCcccccCcCCCcchhhhccccccCccccchh---HHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhcc
Q psy17194        505 SIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFG---GALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQ  581 (871)
Q Consensus       505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g---~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  581 (871)
                                               .+. .+....+.   ....+...++..-............ ..+.. ...++   
T Consensus       224 -------------------------~g~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~---  272 (491)
T 4aps_A          224 -------------------------VSL-AVAGFIAIIVVMNLVGWNSLPAYINLLTIVAIAIPV-FYFAW-MISSV---  272 (491)
T ss_dssp             -------------------------CCC-CCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHH-HHHHH-HC------
T ss_pred             -------------------------HHH-HHHHHHHHHHHHHhccCcccccchhhhhHHHHHHHH-HHHHH-Hhhcc---
Confidence                                     000 00000000   0111112222211111111111111 11110 00000   


Q ss_pred             CCCCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhc
Q psy17194        582 KKPESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL  661 (871)
Q Consensus       582 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~  661 (871)
                        +..     .....+........+..++.+..+......+|.|+++.++.+....+++.....++.+++.++.|++.||
T Consensus       273 --~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r  345 (491)
T 4aps_A          273 --KVT-----STEHLRVVSYIPLFIAAVLFWAIEEQGSVVLATFAAERVDSSWFPVSWFQSLNPLFIMLYTPFFAWLWTA  345 (491)
T ss_dssp             ----------------CTTHHHHHHHHHHHHHHHGGGGTHHHHHHHHSCCCSSSCSGGGTTHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccc-----HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHhccCccCHHHHhccchHHHHHHHHHHHHHHHH
Confidence              000     0011122233444445555666667778889999999899998999999999999999999999999999


Q ss_pred             cCchhh---HHHHHHHHHHhhHHhhhcch---------hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccch
Q psy17194        662 YPTYQW---LMVAVGLVLEGLCCFIIPFS---------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGS  729 (871)
Q Consensus       662 ~~~~~~---~~~~~g~~~~~~~l~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~  729 (871)
                      +++|+.   ..+..+..+.+++++++...         .+.+..++..+..+++.+...+.......   +..|++.+|+
T Consensus       346 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~---~~~p~~~~g~  422 (491)
T 4aps_A          346 WKKNQPSSPTKFAVGLMFAGLSFLLMAIPGALYGTSGKVSPLWLVGSWALVILGEMLISPVGLSVTT---KLAPKAFNSQ  422 (491)
T ss_dssp             TTTC---CHHHHHHHHHHHHHHHTTTHHHHHHCCCCTTCCTHHHHHHHHHHHHHHHTTTTHHHHHHH---HHTTTTCSSS
T ss_pred             HhccCCCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHhHHHHHHHH---HhCCHHHHHH
Confidence            998742   23346777777776666442         24455666777778877776665544444   4455888999


Q ss_pred             HHhHHHHHHHHHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        730 IYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       730 a~g~~~~~~~~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      ++|++++..++|+.+||.+.+.+.+ .++.+.|.+.++++++..++.+...
T Consensus       423 ~~g~~~~~~~~g~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  472 (491)
T 4aps_A          423 MMSMWFLSSSVGSALNAQLVTLYNA-KSEVAYFSYFGLGSVVLGIVLVFLS  472 (491)
T ss_dssp             STHHHHHHHHHHHHHHHHHGGGGGG-SSTTHHHHHTHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999998766 4677788888877777765555443

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.94  E-value=7.4e-26  Score=261.31  Aligned_cols=382  Identities=15%  Similarity=0.084  Sum_probs=244.2

Q ss_pred             hHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHhhh
Q psy17194         45 LVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNP  123 (871)
Q Consensus        45 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~~~  123 (871)
                      +..+.+..++..+......+.++.+..+ +|.                     .++++.+..+.|++.+++.++..++.+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---------------------~~~~~~s~~~~g~~~~~~~~~~~~~~~   72 (524)
T 2xut_A           14 IPYIIASEACERFSFYGMRNILTPFLMTALLL---------------------SIPEELRGAVAKDVFHSFVIGVYFFPL   72 (524)
T ss_dssp             CTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS---------------------CCSSSTTTTTHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------ccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            3345566666667776666777776654 440                     001125889999999999999999999


Q ss_pred             hhhHhhhhh-CCchHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHHHHH--
Q psy17194        124 FSGALIDRI-GYDLPMMIGLCIMFLSTALFACGR-SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGI--  199 (871)
Q Consensus       124 ~~G~l~Dr~-Grr~~l~~~~~~~~i~~~l~~~a~-s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~~g~--  199 (871)
                      ++|+++||+ |||+++.++.++.+++.+++++++ +++.+++.|++.|++.+...+...+++.|++ |+++|+++.+.  
T Consensus        73 ~~G~l~dr~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~  151 (524)
T 2xut_A           73 LGGWIADRFFGKYNTILWLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMGDQF-DQSNKSLAQKAFD  151 (524)
T ss_dssp             HHHHHHTTSSCSHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHTC-STTTTTHHHHHHH
T ss_pred             HHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHHHHc-CccchHHHHHHHH
Confidence            999999999 999999999999999999999998 9999999999999999999999999999997 56788765555  


Q ss_pred             -HHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCC--C----------CCc-c--
Q psy17194        200 -ALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKP--E----------SHS-T--  263 (871)
Q Consensus       200 -~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~--~----------~~~-~--  263 (871)
                       .+...++|.++||.+++.+.+..|||++|++.+++.++..++.++..++.+++.+++++  +          ++. .  
T Consensus       152 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (524)
T 2xut_A          152 MFYFTINFGSFFASLSMPLLLKNFGAAVAFGIPGVLMFVATVFFWLGRKRYIHMPPEPKDPHGFLPVIRSALLTKVEGKG  231 (524)
T ss_dssp             HHHHHHHHHHHHHHHTSTHHHHTSCHHHHHHHHHHHHHHHHHHHHSSSSSCCCCC--------------------CTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccchhHHHHHHHHHhhhhcccC
Confidence             99999999999999999999988999999998888776555544333221111000000  0          000 0  


Q ss_pred             -------------------------------------------cch--h----------hhhcchhHHHHHHHHHH---H
Q psy17194        264 -------------------------------------------VPI--W----------KLFMDPYIAVCSGALLM---A  285 (871)
Q Consensus       264 -------------------------------------------~~~--~----------~~~~~~~~~~~~~~~~~---~  285 (871)
                                                                 .++  .          +..+.+...........   .
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (524)
T 2xut_A          232 NIGLVLALIGGVSAAYALVNIPTLGIVAGLCCAMVLVMGFVGAGASLQLERARKSHPDAAVDGVRSVLRILVLFALVTPF  311 (524)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTTTTCSSHHHHHHHHHHHHHHHTGGGTHHHHSCCSCCSSSSTTTTTHHHHHHHHTTSHHH
T ss_pred             ccchhhhhhhhhhhhhhhcccchhhhhhhhhhhhhhhhcccccchhhHHhhhhccccHhHHHHHHHHHHHHHHHHHHHHH
Confidence                                                       000  0          00011222111111111   1


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCCc-hhHHHHHHhhHHhHHHHHHHHHHHH----hhcCchh--HHHHHHHHHHHHHHHHHh
Q psy17194        286 NVALAFLEPTISLWIEDNLTTDN-WKIGMIWLPAFFPHVFGVVITVKLA----KLYPTYQ--WLMVAVGLVLEGLCCFII  358 (871)
Q Consensus       286 ~~~~~~~~~~~~~~l~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~----dr~g~~~--~~~~~~~~~~~~~~~~~~  358 (871)
                      ...+....+.++.+..+ .+.+. ...+.+.....++.+++.++.+++.    +|.++|.  ...+..+..+.+++.++.
T Consensus       312 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  390 (524)
T 2xut_A          312 WSLFDQKASTWILQAND-MVKPQWFEPAMMQALNPLLVMLLIPFNNFVLYPAIERMGVKLTALRKMGAGIAITGLSWIVV  390 (524)
T ss_dssp             HTTTSSTTTHHHHHHHH-SCCCSSSCHHHHHTTSGGGHHHHGGGTTTC------------CCHHHHHTHHHHHHHHHHTT
T ss_pred             HHHHhccchhhHHhHHh-cCCCeeecHHHHHHHHHHHHHHhHHHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHH
Confidence            11111112233333322 23222 2456666555566666666655553    4443221  112345666666666665


Q ss_pred             hcc---------hhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy17194        359 PFS---------TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA  429 (871)
Q Consensus       359 ~~~---------~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~  429 (871)
                      .+.         .+.+.+++..++.+++.+...+.....   ..+..|++.||+++|+.++...+|..++|.+.|.+.+.
T Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~---~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~~~~~  467 (524)
T 2xut_A          391 GTIQLMMDGGSALSIFWQILPYALLTFGEVLVSATGLEF---AYSQAPKAMKGTIMSFWTLSVTVGNLWVLLANVSVKSP  467 (524)
T ss_dssp             TTTTTTTTTTCCCCSHHHHHHHHHHHHHHHHHHHHHTTT---HHHHCCTTCCTTTHHHHGGGHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCcHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence            543         255566667777888888774444444   34445669999999999999999999999999998774


Q ss_pred             hC--h---------hhHHHHHHHHHHHHHHHHHH
Q psy17194        430 IG--F---------TALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       430 ~g--~---------~~~f~~~~~~~~~~~~~~~~  452 (871)
                      .+  |         +..|++.+++.++..++.++
T Consensus       468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  501 (524)
T 2xut_A          468 TVTEQIVQTGMSVTAFQMFFFAGFAILAAIVFAL  501 (524)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             ccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            21  2         22366666555555544433

>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A*

Probab=99.94  E-value=8.3e-27  Score=260.57  Aligned_cols=389  Identities=12%  Similarity=0.108  Sum_probs=251.9

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      +.+|+|.++......++.........+++|.|+++++|.+..+.|++.+...++..+++++.|+++||+|||+.+  ..+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~lsDr~Grr~~l--~~~   79 (417)
T 2cfq_A            2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL--LWI   79 (417)
T ss_dssp             TTTSCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHH--HHH
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--HHH
Confidence            467899998888887777778888889999999988999999999999999999999999999999999999966  444


Q ss_pred             HHHHHH---HHHHhhcchhhH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGL---CCFIIPFSTSYQ-MLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       348 ~~~~~~---~~~~~~~~~~~~-~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      ..+.++   ......+..... ..+..+.+.+++.+...+...+......+.. +++++.+.+..+....+|..++|.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~~~~~l~  158 (417)
T 2cfq_A           80 ITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKV-SRRSNFEFGRARMFGCVGWALGASIV  158 (417)
T ss_dssp             HHHTTSCHHHHHHHTHHHHHHTTCCHHHHGGGSSTTHHHHTTHHHHHHHHHHH-HHHHTCCHHHHSSSTTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh-hhhcccchHHHHHHHHHHHHHHHHHH
Confidence            433322   111111111110 1112222223323322222233333333321 23567777888778889999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      +++.+ .+|++.|++.++..++..+..++.++   +++             ++..+    ++.++.        +.    
T Consensus       159 ~~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~---~~~-------------~~~~~----~~~~~~--------~~----  205 (417)
T 2cfq_A          159 GIMFT-INNQFVFWLGSGCALILAVLLFFAKT---DAP-------------SSATV----ANAVGA--------NH----  205 (417)
T ss_dssp             HHHHH-HCSHHHHTTTTTTTTTHHHHSCSSCC---CCS-------------CSSCS----SSSSSS--------CC----
T ss_pred             HHHHH-hchhHHHHHHHHHHHHHHHHHHHcCc---ccc-------------ccccc----cccccc--------cc----
Confidence            99987 58999888765543332222111110   000             00000    000000        00    


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (417)
T 2cfq_A          206 --------------------------------------------------------------------------------  205 (417)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCC---Cccchhhhhhccchhhhhhhhhhhhhhh
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTT---DNWKIGMIWLPAFFPHVFGVVITVKLAK  660 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~---s~~~~gl~~~~~~~~~~i~~~~~g~l~d  660 (871)
                       ......++++++++|+++...+..++....++.+..++|.|+++.++.   +....|+......++.+++.++.|++.|
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~d  284 (417)
T 2cfq_A          206 -SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIIN  284 (417)
T ss_dssp             -CCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -ccccHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             000001235678888888766665555555666667799998776653   3445678888888888899999999999


Q ss_pred             ccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhH-HHHHHH
Q psy17194        661 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI-ADISYS  739 (871)
Q Consensus       661 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~-~~~~~~  739 (871)
                      |+++|+  .+..+..+.+++++.+.+..+.+.+++..+..+++.+...+.   ...+..|..|++.+|++.|. +++.++
T Consensus       285 r~g~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~p~~~~g~~~g~~~~~~~~  359 (417)
T 2cfq_A          285 RIGGKN--ALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVG---CFKYITSQFEVRFSATIYLVCFCFFKQ  359 (417)
T ss_dssp             HHCHHH--HHHHHHHHHHHHHHHHTTCCSHHHHHHHTTHHHHHHHHHHHH---HHHHHHHHSCHHHHHHHHHHHHTTTHH
T ss_pred             HhcHHH--HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCHHHHHHHHHHHHHHHHh
Confidence            999888  455666666666666665555444444444444443333222   23455566668889999999 589999


Q ss_pred             HHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHH
Q psy17194        740 LAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIY  778 (871)
Q Consensus       740 ~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~  778 (871)
                      +|+.+||.++|.+.++.|+...|.+.+++.++++.+.+.
T Consensus       360 lg~~~gp~l~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~  398 (417)
T 2cfq_A          360 LAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVF  398 (417)
T ss_dssp             HHHHHHTHHHHTHHHHSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHhhhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998888887777655443

>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli}

Probab=99.93  E-value=1e-25  Score=248.25  Aligned_cols=357  Identities=10%  Similarity=0.047  Sum_probs=268.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q psy17194        277 VCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCF  356 (871)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~  356 (871)
                      .+....++.........+.+|.+ .+++|.++.+.+++.+...++..++.++.|+++||+|||+.+  ..+..+.+++.+
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--~~~~~~~~~~~~   80 (375)
T 2gfp_A            4 MLVLLVAVGQMAQTIYIPAIADM-ARDLNVREGAVQSVMGAYLLTYGVSQLFYGPISDRVGRRPVI--LVGMSIFMLATL   80 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-HTTSSSTTHHHHHHHHHHHHHHHHHHTTHHHHHTTSCCCCCC--HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhH--HHHHHHHHHHHH
Confidence            34455555666666677777764 566899999999999999999999999999999999999955  677778888888


Q ss_pred             HhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhChhhHH
Q psy17194        357 IIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALN  436 (871)
Q Consensus       357 ~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g~~~~f  436 (871)
                      ...+.++.+.+++.+++.|++.+...+.......+..   |+++|++++++.+....+|..++|.+++.+.+..||++.|
T Consensus        81 ~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~  157 (375)
T 2gfp_A           81 VAVTTSSLTVLIAASAMQGMGTGVGGVMARTLPRDLY---ERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWNWRACY  157 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTSSCCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHH
T ss_pred             HHHHhccHHHHHHHHHHHHHHHHhhhhhHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccHHHHH
Confidence            8888889999999999999999987655555555444   4589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCccccc
Q psy17194        437 FLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANV  516 (871)
Q Consensus       437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  516 (871)
                      ++.+++.++..+...+..+   +++             +++.      +  +         +                  
T Consensus       158 ~~~~~~~~~~~~~~~~~~~---~~~-------------~~~~------~--~---------~------------------  186 (375)
T 2gfp_A          158 LFLLVLCAGVTFSMARWMP---ETR-------------PVDA------P--R---------T------------------  186 (375)
T ss_dssp             HHHHHHHHHHHCCCCCSSC---CCS-------------TTTC------C--C---------C------------------
T ss_pred             HHHHHHHHHHHHHHHHHCc---ccC-------------CCCc------c--c---------c------------------
Confidence            9877766554432211111   000             0000      0  0         0                  


Q ss_pred             CcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhc
Q psy17194        517 GTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLF  596 (871)
Q Consensus       517 ~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  596 (871)
                                                                                            +.+.++++++
T Consensus       187 ----------------------------------------------------------------------~~~~~~~~~~  196 (375)
T 2gfp_A          187 ----------------------------------------------------------------------RLLTSYKTLF  196 (375)
T ss_dssp             ----------------------------------------------------------------------CTTTCSTHHH
T ss_pred             ----------------------------------------------------------------------cHHHHHHHHh
Confidence                                                                                  0001236688


Q ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHH-H
Q psy17194        597 MDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL-V  675 (871)
Q Consensus       597 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~-~  675 (871)
                      |+|.++...+..++.+...+.+..++|.|+++.+|+++.+.|+++....++.+++.++.+++.||+++ +. ...... .
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~~~-~~-~~~~~~~~  274 (375)
T 2gfp_A          197 GNSGFNCYLLMLIGGLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST-LM-WQSVICCL  274 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCSCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTHHHH-HH-HHHHHHHH
T ss_pred             cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHH
Confidence            89999998888888888999999999999988899999999999999999999999999999999876 32 222222 2


Q ss_pred             HHhhHHhhhcc--hhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        676 LEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       676 ~~~~~l~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      ..+..++....  ..+.+..++..+..+++.+...+...+...+..+    +++|++.|+.+..+++|..++|.+.|.+.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~p----~~~g~~~g~~~~~~~~g~~~~~~~~g~l~  350 (375)
T 2gfp_A          275 LAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP----FLAGTAGALVGGLQNIGSGVLASLSAMLP  350 (375)
T ss_dssp             HTSSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTHHHHHTHHH----HHHHHHHHHHHHHHHHHHHCCSTTCTHHH
T ss_pred             HHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCC----cccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22222222222  2244555566677777777776665555554443    67899999999999999999999999999


Q ss_pred             hhhChHHHHHHHH
Q psy17194        754 DAIGFTALNFLIA  766 (871)
Q Consensus       754 ~~~g~~~~~~~~a  766 (871)
                      +..++...+.+.+
T Consensus       351 ~~~~~~~~~~~~~  363 (375)
T 2gfp_A          351 QTGQGSLGLLMTL  363 (375)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             cCCcccHHHHHHH
Confidence            8888877766543

>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis}

Probab=99.90  E-value=1.9e-22  Score=232.68  Aligned_cols=174  Identities=7%  Similarity=-0.023  Sum_probs=142.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC------CCchhHHHHHHhhHHhHHHHHHHHHHHHhhc-CchhHHHHH
Q psy17194        273 PYIAVCSGALLMANVALAFLEPTISLWIEDNLT------TDNWKIGMIWLPAFFPHVFGVVITVKLAKLY-PTYQWLMVA  345 (871)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~  345 (871)
                      +.++.+.+..++....++....+++.|+++++|      .+..+.+++.+.+.++..++.++.|+++||+ |||+.+  .
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~~g~r~~~--~   89 (524)
T 2xut_A           12 RQIPYIIASEACERFSFYGMRNILTPFLMTALLLSIPEELRGAVAKDVFHSFVIGVYFFPLLGGWIADRFFGKYNTI--L   89 (524)
T ss_dssp             -CCTHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCSSSTTTTTHHHHHHHHHHHHHHTHHHHHHHHTTSSCSHHHH--H
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH--H
Confidence            345556667777777888888899999999899      9999999999999999999999999999999 999955  6


Q ss_pred             HHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHH---HHHHHHHHHHHHHH
Q psy17194        346 VGLVLEGLCCFIIPFST-SYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAI---ADISYSLAYAIGPI  421 (871)
Q Consensus       346 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi---~~~~~~lg~~igp~  421 (871)
                      .+..+.+++.+++.+.+ +.+.+++.+++.|++.+...+...+...   +.+|+++|+++.+.   .+...++|..++|.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~~~~g~~~g~~  166 (524)
T 2xut_A           90 WLSLIYCVGHAFLAIFEHSVQGFYTGLFLIALGSGGIKPLVSSFMG---DQFDQSNKSLAQKAFDMFYFTINFGSFFASL  166 (524)
T ss_dssp             HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHTTHHHHHHHHH---HTCSTTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchhHHHHHH---HHcCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67777788888888887 8888899999999999887555555544   44555888766655   88999999999999


Q ss_pred             HHHHHHhhhChhhHHHHHHHHHHHHHHHHH
Q psy17194        422 VAGGIVDAIGFTALNFLIAFMNILYAPVLI  451 (871)
Q Consensus       422 l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~  451 (871)
                      +++.+.+..||++.|++.+++.++..++.+
T Consensus       167 ~~~~l~~~~g~~~~f~~~~~~~~~~~~~~~  196 (524)
T 2xut_A          167 SMPLLLKNFGAAVAFGIPGVLMFVATVFFW  196 (524)
T ss_dssp             TSTHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999988877665554443

>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A*

Probab=99.90  E-value=1.5e-22  Score=231.53  Aligned_cols=374  Identities=10%  Similarity=-0.026  Sum_probs=226.5

Q ss_pred             chhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhh------------------cchhhHHHHH
Q psy17194        308 NWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIP------------------FSTSYQMLML  369 (871)
Q Consensus       308 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~  369 (871)
                      ..+.|++.+.+.++..+|++++|+++||+|||+.+  ..+.++..++.++++                  .+++.+.+++
T Consensus        54 ~~~~g~~~s~~~~G~~iG~~~~G~laDr~GRk~~l--~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~  131 (491)
T 4gc0_A           54 NSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSL--KIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVI  131 (491)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHHTCHHHHH--HHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHH
Confidence            34568888999999999999999999999999965  777777778877776                  4678899999


Q ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhC--------hhhHHHHHHH
Q psy17194        370 PICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIG--------FTALNFLIAF  441 (871)
Q Consensus       370 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~g--------~~~~f~~~~~  441 (871)
                      .+++.|+|.|...+.....   +.|..|+++|++..++.+....+|..+++.++..+....+        |+..+.+..+
T Consensus       132 ~R~l~G~g~G~~~~~~~~~---i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (491)
T 4gc0_A          132 YRIIGGIGVGLASMLSPMY---IAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECI  208 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHH
T ss_pred             HHHHHHHHHHHHHHHHHHH---HHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhh
Confidence            9999999999885444444   5555677999999999999999999999888887765432        4444444433


Q ss_pred             HHHHHHHHHHHHhhcccC---CCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCc
Q psy17194        442 MNILYAPVLIYLKNIYDF---KPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGT  518 (871)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (871)
                      ..++.....++.++..+.   +.++++..+..+             +........++..+.                   
T Consensus       209 ~~~~~~~~~~~~peSp~~L~~~~~~~~a~~~l~-------------~~~~~~~~~~~~~~~-------------------  256 (491)
T 4gc0_A          209 PALLFLMLLYTVPESPRWLMSRGKQEQAEGILR-------------KIMGNTLATQAVQEI-------------------  256 (491)
T ss_dssp             HHHHHHHHGGGSCCCHHHHHHTTCHHHHHHHHH-------------HHHHHHHHHHHHHHH-------------------
T ss_pred             hhhhhhhhhhcCCCChHHHHHcCchhHHHHhHH-------------HhcCCchhHHHHHHH-------------------
Confidence            333333322222221110   000000000000             000000000000000                   


Q ss_pred             CCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccc
Q psy17194        519 NGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMD  598 (871)
Q Consensus       519 ~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  598 (871)
                                                                            +...++.+       ........++.
T Consensus       257 ------------------------------------------------------~~~~~~~~-------~~~~~~~~~~~  275 (491)
T 4gc0_A          257 ------------------------------------------------------KHSLDHGR-------KTGGRLLMFGV  275 (491)
T ss_dssp             ------------------------------------------------------HHHHHHHH-------HHTTHHHHSCC
T ss_pred             ------------------------------------------------------HHHHHhhh-------hhhhHHHHhcc
Confidence                                                                  00000000       00011334444


Q ss_pred             hhHHHHHHHHHHHHH-HHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHHHHHHHHHH
Q psy17194        599 PYIAVCSGALLMANV-ALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLE  677 (871)
Q Consensus       599 ~~~~~~~~~~~~~~~-~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~g~~~~  677 (871)
                      +..........+... +.+.+..+.|.+ .+..+.+...........++..+++.++++++.||+|+|+  ....+....
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~--~~~~~~~~~  352 (491)
T 4gc0_A          276 GVIVIGVMLSIFQQFVGINVVLYYAPEV-FKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP--LQIIGALGM  352 (491)
T ss_dssp             THHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHH--HHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhhhHHHhcchHH-HHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcc--hhccchHHH
Confidence            555444444433333 334444444444 4667888888888888889999999999999999999988  445555555


Q ss_pred             hhHHhhhcch----hhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHHHhHhhhhHHHhH
Q psy17194        678 GLCCFIIPFS----TSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIV  753 (871)
Q Consensus       678 ~~~l~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g~~~gp~~~g~l~  753 (871)
                      +++++.++..    .+.+..++.+..+..+.+....+  ....+..|.+|.+.|++++|+.+.+..+++.+++.+.+.+.
T Consensus       353 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~  430 (491)
T 4gc0_A          353 AIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGP--VCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMD  430 (491)
T ss_dssp             HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTTH--HHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHC
T ss_pred             HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhHHHH--HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5555554321    11122222222222222211111  12345556777899999999999999999999998877664


Q ss_pred             h------hhChHHHHHHHHHHHHHHHHHHHHHhccCC
Q psy17194        754 D------AIGFTALNFLIAFMNILYAPVLIYLKNIYD  784 (871)
Q Consensus       754 ~------~~g~~~~~~~~a~~~~~~~~~~~~~~~~~~  784 (871)
                      +      ..++...|++.+++++++.++.+++..+.+
T Consensus       431 ~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~PETk  467 (491)
T 4gc0_A          431 KNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETK  467 (491)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHCCCCT
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHHHHHHHHHheecCCC
Confidence            3      356677888888888888776655544433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	871
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	3e-16
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	2e-06
d1pv7a_	417	f.38.1.2 (A:) Lactose permease {Escherichia coli [	5e-06
d1pw4a_	447	f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es	4e-13

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 79.4 bits (194), Expect = 3e-16
 Identities = 43/359 (11%), Positives = 108/359 (30%), Gaps = 12/359 (3%)

Query: 105 SATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVLFFA 164
           S TG++FA+ ++  L+  P  G L D++G    ++  +  M +  A F       +L + 
Sbjct: 43  SDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYN 102

Query: 165 RSLQGVGSAFADTSGLA-----MIADRFTEENERSQALGIALAFISFGCLVAPPFGGALY 219
             +  +                + A         +   G A  F   G  +     G ++
Sbjct: 103 ILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFEFGRARMFGCVGWALGASIVGIMF 162

Query: 220 QFAGKEIPFLILAFVSLLDGFMLLLV----MKPVKEQLNQKKPESHSTVPIWKLFMDPYI 275
               + + +L      +L   +                      + S     +LF  P +
Sbjct: 163 TINNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKL 222

Query: 276 AVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKL 335
              S  ++  +      +   + +      T      +         +    I      +
Sbjct: 223 WFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLI 282

Query: 336 YPTYQWLMVA-VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVD 394
                      +   +  +      F+TS   +++      F +  +       +    +
Sbjct: 283 INRIGGKNALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFE 342

Query: 395 VRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 453
           VR+ +    +         LA     ++AG + ++IGF     ++  + + +  + ++ 
Sbjct: 343 VRFSATIYLVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT 399

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 48.6 bits (114), Expect = 2e-06
 Identities = 42/411 (10%), Positives = 101/411 (24%), Gaps = 25/411 (6%)

Query: 371 ICGICFGMALVDTALLPTLG-YLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDA 429
                F    +  A  P    +L D+ ++S   S   I   + SL   +   + G + D 
Sbjct: 12  FGLFFFFYFFIMGAYFPFFPIWLHDINHIS--KSDTGIIFAAISLFSLLFQPLFGLLSDK 69

Query: 430 IGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPV 489
           +G      L     +L      ++        +      ++                +  
Sbjct: 70  LGLRKY-LLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAF 128

Query: 490 ANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAG 549
                    +                      +  F     + G            QF  
Sbjct: 129 IEKVSRRSNFEFG------------------RARMFGCVGWALGASIVGIMFTINNQFVF 170

Query: 550 KEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALL 609
                  L    LL                      + S     +LF  P +   S  ++
Sbjct: 171 WLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVI 230

Query: 610 MANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLM 669
             +      +   + +      T      +         +    I      +        
Sbjct: 231 GVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKN 290

Query: 670 VA-VGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYG 728
              +   +  +      F+TS   +++      F +  +       +    +VR+ +   
Sbjct: 291 ALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIY 350

Query: 729 SIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYL 779
            +         LA     ++AG + ++IGF     ++  + + +  + ++ 
Sbjct: 351 LVCFC--FFKQLAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFT 399

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

 Score = 47.5 bits (111), Expect = 5e-06
 Identities = 26/219 (11%), Positives = 67/219 (30%)

Query: 29  IVWEKLQEPKSQRKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNES 88
           +++    +  S   +   + +        L + +      +   +   G        ++ 
Sbjct: 183 LLFFAKTDAPSSATVANAVGANHSAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQ 242

Query: 89  RYHTKPHHREHAEGEDSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLS 148
             +         E      G +     ++   +  F+  +I+RIG    +++   IM + 
Sbjct: 243 FANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNALLLAGTIMSVR 302

Query: 149 TALFACGRSYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGC 208
               +   S   +   ++L      F        I  +F      +  L     F     
Sbjct: 303 IIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQFEVRFSATIYLVCFCFFKQLAM 362

Query: 209 LVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMK 247
           +      G +Y+  G +  +L+L  V+L    + +  + 
Sbjct: 363 IFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTLS 401

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 70.1 bits (170), Expect = 4e-13
 Identities = 40/375 (10%), Positives = 101/375 (26%), Gaps = 27/375 (7%)

Query: 104 DSATGVLFASKAIVQLMVNPFSGALIDRIGYDLPMMIGLCIMFLSTALFAC----GRSYG 159
               G   +  +I         G++ DR    + +  GL +                S  
Sbjct: 58  RGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIA 117

Query: 160 VLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQALGIALAFISFGCLVAPPFGGALY 219
           V+F    L G             +   ++++           A    G +    F   + 
Sbjct: 118 VMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA 177

Query: 220 QFAGKEIPFLILAFVSLLDGFMLLLVMK------------------PVKEQLNQKKPESH 261
            F        + AF ++L       +M+                  P       ++  + 
Sbjct: 178 WFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTA 237

Query: 262 STVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFP 321
             + +  +  +  +   + A +   +    +      ++++       K    +    + 
Sbjct: 238 KQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA 297

Query: 322 HVFGVVITVKLAKLYPTYQWLMVAV---GLVLEGLCCFIIPFSTSYQMLMLPICGICFGM 378
            + G ++   ++            V    LV      + +  + +  + M+ +  I F +
Sbjct: 298 GIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLI 357

Query: 379 ALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAIGFTALNFL 438
                 +      L   +          +    Y         + G  VD  G+     +
Sbjct: 358 YGPVMLIGLHALELAPKKAAGTAAGFTGL--FGYLGGSVAASAIVGYTVDFFGWDGGFMV 415

Query: 439 IAFMNILYAPVLIYL 453
           +   +IL   +LI +
Sbjct: 416 MIGGSILAVILLIVV 430

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	871
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	100.0
d1pw4a_	447	Glycerol-3-phosphate transporter {Escherichia coli	99.96
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.95
d1pv7a_	417	Lactose permease {Escherichia coli [TaxId: 562]}	99.93

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-32  Score=308.74  Aligned_cols=382  Identities=11%  Similarity=0.024  Sum_probs=296.6

Q ss_pred             cchhhHHHHHHHHHHHhhhhhhcccchhHHHHhcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHH
Q psy17194         41 RKLILVIVSTALLLDNMLYMVIVPIIPDYLRFIGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLM  120 (871)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~  120 (871)
                      +|..+..++++++..+++...+..+.|.+. ++|.                           |.+|+|++.+++.+++.+
T Consensus        23 ~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~g~---------------------------s~~~~g~~~s~~~~~~~~   74 (447)
T d1pw4a_          23 RWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQGF---------------------------SRGDLGFALSGISIAYGF   74 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SSTT---------------------------CSSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCc---------------------------CHHHHHHHHHHHHHHHHH
Confidence            466666777777888887777777667553 4544                           899999999999999999


Q ss_pred             hhhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHhhhhhhhhhHHHHhhcccCChhhHHHH
Q psy17194        121 VNPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGR----SYGVLFFARSLQGVGSAFADTSGLAMIADRFTEENERSQA  196 (871)
Q Consensus       121 ~~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~----s~~~l~~~r~l~G~~~g~~~~~~~a~i~~~~~~~~~r~~~  196 (871)
                      +++++|+++||+|||+++.++.++.+++.+++++++    +++.+++.|++.|++.+...+...++++|++ |+++|+++
T Consensus        75 ~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~r~~~  153 (447)
T d1pw4a_          75 SKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWW-SQKERGGI  153 (447)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTC-TTTHHHHH
T ss_pred             HHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH-Hhhccccc
Confidence            999999999999999999999999999999988764    6789999999999999999999999999997 66899999


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhh-CChhHHHHHHHHHHHHHHHHHHhcccchhhhccCCCC----------------
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFA-GKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPE----------------  259 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~-gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~----------------  259 (871)
                      +++.+.+..+|.++++.+++.+.+.. +||+.|++.+++.++..++.+++.++.++.......+                
T Consensus       154 ~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (447)
T d1pw4a_         154 VSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQ  233 (447)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTCCC-----------
T ss_pred             ccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhhhhcccchhhcccc
Confidence            99999999999999999998877654 7999999999998888888888877765432211100                


Q ss_pred             --CCcccchhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcC
Q psy17194        260 --SHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYP  337 (871)
Q Consensus       260 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g  337 (871)
                        .......++.++++.++......++..........+.+.|+.+.++.+..+.++......++.+++.++.|++.||++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  313 (447)
T d1pw4a_         234 ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVF  313 (447)
T ss_dssp             --CCTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ccchhhHHHHHHHcCchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhcc
Confidence              001112345677888888888888888888888899999999999999999999999999999999999999999998


Q ss_pred             chhHHHH-HHHHHHHHHHHHHhhc--chhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHH
Q psy17194        338 TYQWLMV-AVGLVLEGLCCFIIPF--STSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSL  414 (871)
Q Consensus       338 ~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~l  414 (871)
                      +++.... .....+..++.+....  ..+.+..++..++.+++.+...+...   ....+..|++.||++.|+.+...++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~~  390 (447)
T d1pw4a_         314 RGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIG---LHALELAPKKAAGTAAGFTGLFGYL  390 (447)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHTTSCCTTCHHHHHHHHHHHHHHHTHHHHHHH---HHHHHTSCTTHHHHHHHHHHHHHHH
T ss_pred             ccccccccchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHH
Confidence            7653221 2222222233333322  34455555555666666655433332   3344556779999999999888877


Q ss_pred             -HHHHHHHHHHHHHhhhChhhHHHHHHHHHHHHHHHHHHHh
Q psy17194        415 -AYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  454 (871)
Q Consensus       415 -g~~igp~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~  454 (871)
                       |..++|.+.|.+.|..||+..|++.+++.+++.++.....
T Consensus       391 ~g~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  431 (447)
T d1pw4a_         391 GGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM  431 (447)
T ss_dssp             HHHHHHHHHHHHHHHSSCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence             5567899999999999999999888777766665544443

>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=6e-28  Score=269.87  Aligned_cols=373  Identities=11%  Similarity=0.013  Sum_probs=264.5

Q ss_pred             HHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhhcc----hhhHHHHHHHHH
Q psy17194        298 LWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGLVLEGLCCFIIPFS----TSYQMLMLPICG  373 (871)
Q Consensus       298 ~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~l  373 (871)
                      ++++| +|+|..+.|++.+.+.++..++.++.|+++||+|||+.+  ..+.++.+++.+++++.    .+.+.+++.+++
T Consensus        49 p~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (447)
T d1pw4a_          49 PYLVE-QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFL--PAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL  125 (447)
T ss_dssp             HHTTS-STTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--HHHHHHHHHHHHHHHHCHHHHSSSSHHHHHHHH
T ss_pred             HHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH--HHHHHHHHHHHhhccccchhhhhHHHHHHHHHH
Confidence            44554 799999999999999999999999999999999999955  67777777777776655    356778888899


Q ss_pred             HHHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-ChhhHHHHHHHHHHHHHHHHHH
Q psy17194        374 ICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVAGGIVDAI-GFTALNFLIAFMNILYAPVLIY  452 (871)
Q Consensus       374 ~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~g~l~~~~-g~~~~f~~~~~~~~~~~~~~~~  452 (871)
                      .|++.+...+.....   +.+.+|+++|++++++.+....+|..++|.+++.+.+.. +|++.|++.+++.++..++.+.
T Consensus       126 ~g~~~~~~~~~~~~~---i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~  202 (447)
T d1pw4a_         126 CGWFQGMGWPPCGRT---MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFA  202 (447)
T ss_dssp             HHHHHHHTHHHHHHH---HHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTCCSTTCTHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhhhhhHHHHH---HHHHHHhhcccccccccccccchhhhhhhhhhhhHhhhhhcccccchhhhhhHHHHHHHHHH
Confidence            999988774444443   445566799999999999999999999999999887765 6999999888777766665555


Q ss_pred             HhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccccccCCCcCcccccCcCCCcchhhhccccc
Q psy17194        453 LKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQETSIDENKQPAANVGTNGVSNPFKASAPST  532 (871)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (871)
                      ..+..++.....+.++..++         .       .++..   +.                .                
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~---------~-------~~~~~---~~----------------~----------------  231 (447)
T d1pw4a_         203 MMRDTPQSCGLPPIEEYKND---------Y-------PDDYN---EK----------------A----------------  231 (447)
T ss_dssp             HCCCSSTTTCCCSCTTTCCC------------------------------------------------------------
T ss_pred             hcccchhhcccchhhhhhhh---------c-------ccchh---hc----------------c----------------
Confidence            44322111100000000000         0       00000   00                0                


Q ss_pred             cCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCCCCCCcccchhhhccchhHHHHHHHHHHHH
Q psy17194        533 GPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKKPESHSTVPIWKLFMDPYIAVCSGALLMAN  612 (871)
Q Consensus       533 g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  612 (871)
                                                                       +++........+.++++|.++......++.+
T Consensus       232 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (447)
T d1pw4a_         232 -------------------------------------------------EQELTAKQIFMQYVLPNKLLWYIAIANVFVY  262 (447)
T ss_dssp             -----------------------------------------------------CCTHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred             -------------------------------------------------ccccchhhHHHHHHHcCchHHHHHHHhhhhh
Confidence                                                             0000001112467889999999999999999


Q ss_pred             HHHHHhhhcHHHHHHHhcCCCccchhhhhhccchhhhhhhhhhhhhhhccCchhhHH-HHHHHHHHhhHHhhhc--chhh
Q psy17194        613 VALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLM-VAVGLVLEGLCCFIIP--FSTS  689 (871)
Q Consensus       613 ~~~~~~~~~lp~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~-~~~g~~~~~~~l~~~~--~~~~  689 (871)
                      ...+....++|.|+++.++++..+.++......++.+++.++.|++.||+++++... ......+..++++.+.  ...+
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  342 (447)
T d1pw4a_         263 LLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN  342 (447)
T ss_dssp             HHHHHHHHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred             hhhhcchhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhccccc
Confidence            999999999999999999999999999999999999999999999999998764322 2222222223333332  3445


Q ss_pred             hHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHHHHHHHHH-HhHhhhhHHHhHhhhChHHHHHHHHHH
Q psy17194        690 YQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLA-YAIGPIVAGGIVDAIGFTALNFLIAFM  768 (871)
Q Consensus       690 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~~~~~~~g-~~~gp~~~g~l~~~~g~~~~~~~~a~~  768 (871)
                      .+..++.++..|++.+...+...   ....|..|++.+|++.|+.+++.+++ ..++|.+.|.+.|++|++..|.+.+++
T Consensus       343 ~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g~~~~~~~~~~~  419 (447)
T d1pw4a_         343 PTVDMICMIVIGFLIYGPVMLIG---LHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG  419 (447)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHH---HHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence            55555666666666555444333   34445555888999999999988885 566899999999999999999888877


Q ss_pred             HHHHHHHHHHH
Q psy17194        769 NILYAPVLIYL  779 (871)
Q Consensus       769 ~~~~~~~~~~~  779 (871)
                      .+++..+.+.+
T Consensus       420 ~~~~~~~~~~~  430 (447)
T d1pw4a_         420 SILAVILLIVV  430 (447)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77766544444

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=4e-26  Score=251.09  Aligned_cols=380  Identities=13%  Similarity=0.162  Sum_probs=269.4

Q ss_pred             hhhHHHHHHHHHHHhhhhhhcccchhHHHH-hcCCCcchhHHhhhhcccCCCCCCcccccCchhHHHHHHHHHHHHHHHh
Q psy17194         43 LILVIVSTALLLDNMLYMVIVPIIPDYLRF-IGAWGEEDQLQALNESRYHTKPHHREHAEGEDSATGVLFASKAIVQLMV  121 (871)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~~~  121 (871)
                      +..+.+.+.+++..+..+...|++|.+.++ +|.                           |++++|++.+++.+++.++
T Consensus         7 ~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~---------------------------s~~~~g~i~s~~~l~~~i~   59 (417)
T d1pv7a_           7 TNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHI---------------------------SKSDTGIIFAAISLFSLLF   59 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---------------------------CHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC---------------------------CHHHHHHHHHHHHHHHHHH
Confidence            445667777788888888889999987654 555                           9999999999999999999


Q ss_pred             hhhhhHhhhhhCCchHHHHHHHHHHHHHHHHHhhhhHHHH----HHHHHHHHhhhhhhhhhHHHHhhcccCC-hhhHHHH
Q psy17194        122 NPFSGALIDRIGYDLPMMIGLCIMFLSTALFACGRSYGVL----FFARSLQGVGSAFADTSGLAMIADRFTE-ENERSQA  196 (871)
Q Consensus       122 ~~~~G~l~Dr~Grr~~l~~~~~~~~i~~~l~~~a~s~~~l----~~~r~l~G~~~g~~~~~~~a~i~~~~~~-~~~r~~~  196 (871)
                      ++++|+++||+|||++++++..+..++..++.+..+....    ++.+.+.+.+.+...........+...+ ++++.+.
T Consensus        60 ~~~~G~l~Dr~grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (417)
T d1pv7a_          60 QPLFGLLSDKLGLRKYLLWIITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEKVSRRSNFE  139 (417)
T ss_dssp             HHHHHHHHHHHTTCTHHHHHHHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccchhhhhHHH
Confidence            9999999999999999999999999988888887665543    4555555655555554444444433222 2345567


Q ss_pred             HHHHHHHHHHHHHHhHHHHHHHHhhhCChhHHHHHHHHHHHHHHHHHHhcccchhhhccC-----CCCCCcccchhhhhc
Q psy17194        197 LGIALAFISFGCLVAPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQK-----KPESHSTVPIWKLFM  271 (871)
Q Consensus       197 ~g~~~~~~~~G~~lg~~l~~~l~~~~gwr~~f~~~~~~~l~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~  271 (871)
                      .+........+..+++.+++.+.+. +|+..+........+..++..+..++.++..+++     .+++.......+.++
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (417)
T d1pv7a_         140 FGRARMFGCVGWALGASIVGIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGANHSAFSLKLALELFR  218 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSCCCCCCHHHHHHHTT
T ss_pred             HHHHhhhhccccccccccccccccc-cccccccchhhHHHHHHHHHHHHhcccccchhhhhhhhhhcccccccccccccc
Confidence            7888888999999999999998875 6666676666666666666666665544322211     111112222334444


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHHH
Q psy17194        272 DPYIAVCSGALLMANVALAFLEPTISLWIEDN---LTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVGL  348 (871)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~  348 (871)
                      ++..+......................+....   .+.+....+.......++..++..+.+++.||+++++.+  ..+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~~~~~--~~~~  296 (417)
T d1pv7a_         219 QPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIINRIGGKNAL--LLAG  296 (417)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHCHHHHH--HHHH
T ss_pred             cccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcccccccccccccchhhhhhhhcccccccch--hhhH
Confidence            44444444433333333333333333332221   122344556667777888888999999999999999855  6777


Q ss_pred             HHHHHHHHHhhcchhhHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccchhhHHHHH-HHHHHHHHHHHHHHHHHHH
Q psy17194        349 VLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA-DISYSLAYAIGPIVAGGIV  427 (871)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~-~~~~~lg~~igp~l~g~l~  427 (871)
                      .+.+++.+...+.++.+..++..++.+++.+...+......   .+..|++.|+++.++. +....+|.+++|.+.|++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~G~l~  373 (417)
T d1pv7a_         297 TIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYI---TSQFEVRFSATIYLVCFCFFKQLAMIFMSVLAGNMY  373 (417)
T ss_dssp             HHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHSCGGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHH---HHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            77788888888888888888888888988888755554444   4445669999999985 5567899999999999999


Q ss_pred             hhhChhhHHHHHHHHHHHHHHHHHHHhh
Q psy17194        428 DAIGFTALNFLIAFMNILYAPVLIYLKN  455 (871)
Q Consensus       428 ~~~g~~~~f~~~~~~~~~~~~~~~~~~~  455 (871)
                      |..|++..|++.+++.++..++..+..+
T Consensus       374 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~  401 (417)
T d1pv7a_         374 ESIGFQGAYLVLGLVALGFTLISVFTLS  401 (417)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999988888777666555544

>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]}

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: LacY-like proton/sugar symporter
domain: Lactose permease
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=5.3e-25  Score=242.00  Aligned_cols=391  Identities=10%  Similarity=0.052  Sum_probs=251.8

Q ss_pred             hhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCchhHHHHHHhhHHhHHHHHHHHHHHHhhcCchhHHHHHHH
Q psy17194        268 KLFMDPYIAVCSGALLMANVALAFLEPTISLWIEDNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAKLYPTYQWLMVAVG  347 (871)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~  347 (871)
                      +.+|||++|.+....++..+......+++|.|+++++|.|..++|++.+.+.++..+++++.|+++||+||||.+  ..+
T Consensus         2 ~~lkn~~~~~l~~~~f~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~i~s~~~l~~~i~~~~~G~l~Dr~grr~~l--~~~   79 (417)
T d1pv7a_           2 YYLKNTNFWMFGLFFFFYFFIMGAYFPFFPIWLHDINHISKSDTGIIFAAISLFSLLFQPLFGLLSDKLGLRKYL--LWI   79 (417)
T ss_dssp             HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCTHH--HHH
T ss_pred             CcccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHH--HHH
Confidence            357899999999999999899888999999999999999999999999999999999999999999999999965  555


Q ss_pred             HHHHHHHHHHhhcchhhHHHHHHHHHH----HHHHhhhhhhhhhhhhhhhccccccchhhHHHHHHHHHHHHHHHHHHHH
Q psy17194        348 LVLEGLCCFIIPFSTSYQMLMLPICGI----CFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIADISYSLAYAIGPIVA  423 (871)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~l~~~~~l~----g~g~~~~~~~~~~~~~~~~~~~~~~~rg~a~gi~~~~~~lg~~igp~l~  423 (871)
                      .....++........+........++.    +.+.+..............+. ..+++....+........+..++|.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (417)
T d1pv7a_          80 ITGMLVMFAPFFIFIFGPLLQYNILVGSIVGGIYLGFCFNAGAPAVEAFIEK-VSRRSNFEFGRARMFGCVGWALGASIV  158 (417)
T ss_dssp             HHHHHHTHHHHHHHTHHHHHHTTCHHHHHHTTTTGGGGGTTHHHHHHHHHHH-HHHHHSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccccccchhhcccccccc-hhhhhHHHHHHHhhhhccccccccccc
Confidence            555555555554444433322222222    222222211111111111111 123445667777788888999999999


Q ss_pred             HHHHhhhChhhHHHHHHHHHHHHHHHHHHHhhcccCCCCchhhhhccCCCcccccCcccccccccccccccccccccccc
Q psy17194        424 GGIVDAIGFTALNFLIAFMNILYAPVLIYLKNIYDFKPFENEANILMADPPKKEYQTYTMQDRQPVANDYKNHLEYSMQE  503 (871)
Q Consensus       424 g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (871)
                      +.+.+. +|+..+........+...+..+..+...+...++++++..                 .               
T Consensus       159 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~---------------  205 (417)
T d1pv7a_         159 GIMFTI-NNQFVFWLGSGCALILAVLLFFAKTDAPSSATVANAVGAN-----------------H---------------  205 (417)
T ss_dssp             HHHHHH-CHHHHHHHHHHHHHHHHHHHHSSCCCSCSSSCSSHHHHSC-----------------C---------------
T ss_pred             cccccc-cccccccchhhHHHHHHHHHHHHhcccccchhhhhhhhhh-----------------c---------------
Confidence            988775 4555554444444433333332221111100000000000                 0               


Q ss_pred             cccCCCcCcccccCcCCCcchhhhccccccCccccchhHHHHhhcCCchhHHHHHHHHHHHHHHHHHhcccchhhhccCC
Q psy17194        504 TSIDENKQPAANVGTNGVSNPFKASAPSTGPPETPPFGGALYQFAGKEIPFLILAFVSLLDGFMLLLVMKPVKEQLNQKK  583 (871)
Q Consensus       504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  583 (871)
                                                                                                      
T Consensus       206 --------------------------------------------------------------------------------  205 (417)
T d1pv7a_         206 --------------------------------------------------------------------------------  205 (417)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCcccchhhhccchhHHHHHHHHHHHHHHHHHhhhcHHHHHH---HhcCCCccchhhhhhccchhhhhhhhhhhhhhh
Q psy17194        584 PESHSTVPIWKLFMDPYIAVCSGALLMANVALAFLEPTISLWIE---DNLTTDNWKIGMIWLPAFFPHVFGVVITVKLAK  660 (871)
Q Consensus       584 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~---~~~g~s~~~~gl~~~~~~~~~~i~~~~~g~l~d  660 (871)
                       .........+.++++.......................+.+..   +..+.+....+.......++..++..+.+++.|
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  284 (417)
T d1pv7a_         206 -SAFSLKLALELFRQPKLWFLSLYVIGVSCTYDVFDQQFANFFTSFFATGEQGTRVFGYVTTMGELLNASIMFFAPLIIN  284 (417)
T ss_dssp             -CCCCHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred             -ccccccccccccccccccchhhhhHHHHHHHHhhhccccccccccccccccchhhhcccccccccccccchhhhhhhhc
Confidence             0000000122233333333232333333333333333333322   233455667778888888999999999999999


Q ss_pred             ccCchhhHHHHHHHHHHhhHHhhhcchhhhHHHHHHHHHHhhhhhhcchhhhhhhhhhhhhccccccchHHhHH-HHHHH
Q psy17194        661 LYPTYQWLMVAVGLVLEGLCCFIIPFSTSYQMLMLPICGICFGMALVDTALLPTLGYLVDVRYVSVYGSIYAIA-DISYS  739 (871)
Q Consensus       661 ~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~a~g~~-~~~~~  739 (871)
                      |+++++  ...++..+.+++++.+.+.++.+..++..+..+++.+...+...+...+..   |++.+|++.|+. ++.+.
T Consensus       285 r~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  359 (417)
T d1pv7a_         285 RIGGKN--ALLLAGTIMSVRIIGSSFATSALEVVILKTLHMFEVPFLLVGCFKYITSQF---EVRFSATIYLVCFCFFKQ  359 (417)
T ss_dssp             HHCHHH--HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CGGGHHHHHHHHHTTTHH
T ss_pred             cccccc--chhhhHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHC---CHhHHHHHHHHHHHHHHH
Confidence            999888  667777788888888877777777777777888887877665555555444   488899999974 67788


Q ss_pred             HHHhHhhhhHHHhHhhhChHHHHHHHHHHHHHHHHHHHHHh
Q psy17194        740 LAYAIGPIVAGGIVDAIGFTALNFLIAFMNILYAPVLIYLK  780 (871)
Q Consensus       740 ~g~~~gp~~~g~l~~~~g~~~~~~~~a~~~~~~~~~~~~~~  780 (871)
                      +|..+||.+.|.+.|++|+++++++.+++.++..++.++..
T Consensus       360 ~g~~i~~~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~l  400 (417)
T d1pv7a_         360 LAMIFMSVLAGNMYESIGFQGAYLVLGLVALGFTLISVFTL  400 (417)
T ss_dssp             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999988887775555443