Psyllid ID: psy1727


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
MEATAKPHHHDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
cccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccEEEccEEEccccHHHHHHHHHHcccEEEEEEcccccccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEcccccccccccccEEEEEcccccccccccccccccccccc
cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccHHHHHHHcccccccEcccHHHHHHHHHHHHcccEcEcccccccccccccccccccccEcEEEEEEccccHHHHHHHHHHHccEEEEEcHHHcccccccEEcccHHHHccccccccEEEEEEEEEEEccccccccccEEEEEccEcccccEccEEEEEEEccEcccccEccEEEEccccccc
meatakphhhdklEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLvdcdkvdagcggglmSNAFETIISKlggglegekdypykgsnrachlnKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQfyfggvshplkflckggmdnldhGVLIVGYGvhktkfthkiqpywiiknswgphwgektmpfwiiknswgprwgeqvTKSIYSSAPVT
meatakphhhdklEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKsiyssapvt
MEATAKPHHHDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
**************HVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTK*********
***************VAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
**********DKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
*********HDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEATAKPHHHDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGEGTHLALKLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTKSIYSSAPVT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query240 2.2.26 [Sep-21-2011]
Q9VN93614 Putative cysteine protein yes N/A 0.604 0.236 0.533 4e-41
Q26534319 Cathepsin L OS=Schistosom N/A N/A 0.65 0.489 0.464 1e-34
Q10716371 Cysteine proteinase 1 OS= N/A N/A 0.587 0.380 0.468 1e-32
P25804363 Cysteine proteinase 15A O N/A N/A 0.595 0.393 0.465 1e-31
P43296368 Cysteine proteinase RD19a yes N/A 0.579 0.377 0.478 2e-31
Q9UBX1484 Cathepsin F OS=Homo sapie yes N/A 0.566 0.280 0.479 3e-31
P43295361 Probable cysteine protein no N/A 0.587 0.390 0.471 5e-31
Q9R013462 Cathepsin F OS=Mus muscul yes N/A 0.566 0.294 0.465 9e-30
P14658 450 Cysteine proteinase OS=Tr N/A N/A 0.562 0.3 0.426 2e-27
P04988343 Cysteine proteinase 1 OS= no N/A 0.583 0.408 0.427 3e-27
>sp|Q9VN93|CPR1_DROME Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2 Back     alignment and function desciption
 Score =  168 bits (425), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 5/150 (3%)

Query: 62  KLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQS 121
           +L+DCD  D+ C GGLM NA++ I  K  GGLE E +YPYK     CH N+    V++  
Sbjct: 445 ELLDCDTTDSACNGGLMDNAYKAI--KDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAG 502

Query: 122 YVNV-SSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIV 180
           +V++   +ET M ++L+ NGP+++ INANAMQFY GGVSHP K LC     NLDHGVL+V
Sbjct: 503 FVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALC--SKKNLDHGVLVV 560

Query: 181 GYGVHKTKFTHKIQPYWIIKNSWGPHWGEK 210
           GYGV      HK  PYWI+KNSWGP WGE+
Sbjct: 561 GYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 590




May have a role in autophagic cell death.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|Q26534|CATL_SCHMA Cathepsin L OS=Schistosoma mansoni GN=CL1 PE=2 SV=1 Back     alignment and function description
>sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1 Back     alignment and function description
>sp|P25804|CYSP_PEA Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1 Back     alignment and function description
>sp|P43296|RD19A_ARATH Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1 Back     alignment and function description
>sp|Q9UBX1|CATF_HUMAN Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1 Back     alignment and function description
>sp|P43295|A494_ARATH Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2 Back     alignment and function description
>sp|Q9R013|CATF_MOUSE Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1 Back     alignment and function description
>sp|P14658|CYSP_TRYBB Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1 Back     alignment and function description
>sp|P04988|CYSP1_DICDI Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
244790097 586 cathepsin F isoform 2 precursor [Acyrtho 0.604 0.247 0.602 6e-48
156546466 1036 PREDICTED: hypothetical protein LOC10012 0.604 0.139 0.586 7e-48
161408101 803 cathepsin F-like cysteine protease [Plau 0.604 0.180 0.610 8e-48
350421176 884 PREDICTED: hypothetical protein LOC10074 0.604 0.164 0.604 5e-47
383863617 884 PREDICTED: uncharacterized protein LOC10 0.604 0.164 0.604 4e-46
307200028 1032 Putative cysteine proteinase CG12163 [Ha 0.604 0.140 0.583 1e-45
189239337 1726 PREDICTED: similar to cathepsin F-like c 0.604 0.084 0.590 2e-45
270011071 1761 cystatin [Tribolium castaneum] 0.604 0.082 0.590 2e-45
260234113 2676 cysteine proteinase inhibitor precursor 0.604 0.054 0.590 4e-45
307175778 887 Putative cysteine proteinase CG12163 [Ca 0.604 0.163 0.590 7e-45
>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum] Back     alignment and taxonomy information
 Score =  196 bits (499), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 91/151 (60%), Positives = 115/151 (76%), Gaps = 6/151 (3%)

Query: 62  KLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKG--SNRACHLNKEEIRVKI 119
           +L+DCD +D GCGGGLM+ AFE + +   GGLE E DYPY+G    + C L K +++V I
Sbjct: 416 ELIDCDNLDNGCGGGLMTQAFEAVENL--GGLETESDYPYEGHADRKGCQLKKSDVKVSI 473

Query: 120 QSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLI 179
              VNVS+DE ++AK+LVK+GP++V +NANAMQFY GGVSHP+  LC     +LDHGV I
Sbjct: 474 SKAVNVSTDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSP--KSLDHGVAI 531

Query: 180 VGYGVHKTKFTHKIQPYWIIKNSWGPHWGEK 210
           VGYGVH+TK+THK  PYW+IKNSWGP WGEK
Sbjct: 532 VGYGVHRTKYTHKNLPYWLIKNSWGPGWGEK 562




Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali] Back     alignment and taxonomy information
>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens] Back     alignment and taxonomy information
>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile rotundata] Back     alignment and taxonomy information
>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium castaneum] Back     alignment and taxonomy information
>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum] Back     alignment and taxonomy information
>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta] gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta] Back     alignment and taxonomy information
>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query240
FB|FBgn0260462614 CG12163 [Drosophila melanogast 0.604 0.236 0.533 9.8e-48
TAIR|locus:2082687367 AT3G54940 [Arabidopsis thalian 0.591 0.386 0.449 1.3e-44
WB|WBGene00007055477 tag-196 [Caenorhabditis elegan 0.575 0.289 0.527 3.2e-43
ZFIN|ZDB-GENE-030131-9831473 ctsf "cathepsin F" [Danio reri 0.579 0.293 0.489 5.2e-41
UNIPROTKB|F1RU48460 CTSF "Uncharacterized protein" 0.608 0.317 0.484 5.8e-40
UNIPROTKB|E2RR02460 CTSF "Uncharacterized protein" 0.608 0.317 0.477 5.1e-39
UNIPROTKB|Q9UBX1484 CTSF "Cathepsin F" [Homo sapie 0.608 0.301 0.471 9.3e-38
RGD|1308181462 Ctsf "cathepsin F" [Rattus nor 0.604 0.313 0.474 1.9e-37
UNIPROTKB|Q0VCU3460 CTSF "Uncharacterized protein" 0.604 0.315 0.468 2.4e-37
TAIR|locus:2120222368 RD19 "RESPONSIVE TO DEHYDRATIO 0.575 0.375 0.489 6.4e-37
FB|FBgn0260462 CG12163 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 429 (156.1 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
 Identities = 80/150 (53%), Positives = 102/150 (68%)

Query:    62 KLVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQS 121
             +L+DCD  D+ C GGLM NA++ I  K  GGLE E +YPYK     CH N+    V++  
Sbjct:   445 ELLDCDTTDSACNGGLMDNAYKAI--KDIGGLEYEAEYPYKAKKNQCHFNRTLSHVQVAG 502

Query:   122 YVNV-SSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIV 180
             +V++   +ET M ++L+ NGP+++ INANAMQFY GGVSHP K LC     NLDHGVL+V
Sbjct:   503 FVDLPKGNETAMQEWLLANGPISIGINANAMQFYRGGVSHPWKALCS--KKNLDHGVLVV 560

Query:   181 GYGVHKTKFTHKIQPYWIIKNSWGPHWGEK 210
             GYGV      HK  PYWI+KNSWGP WGE+
Sbjct:   561 GYGVSDYPNFHKTLPYWIVKNSWGPRWGEQ 590


GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP
GO:0048102 "autophagic cell death" evidence=IEP
GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS
GO:0006508 "proteolysis" evidence=ISS
GO:0004869 "cysteine-type endopeptidase inhibitor activity" evidence=IEA
GO:0045169 "fusome" evidence=IDA
GO:0035220 "wing disc development" evidence=IGI
GO:0022416 "chaeta development" evidence=IGI
TAIR|locus:2082687 AT3G54940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00007055 tag-196 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9831 ctsf "cathepsin F" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1RU48 CTSF "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR02 CTSF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q9UBX1 CTSF "Cathepsin F" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|1308181 Ctsf "cathepsin F" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCU3 CTSF "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2120222 RD19 "RESPONSIVE TO DEHYDRATION 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9VN93CPR1_DROME3, ., 4, ., 2, 2, ., -0.53330.60410.2361yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 2e-54
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 2e-51
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 2e-33
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 6e-33
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 8e-23
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 2e-22
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 5e-21
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 1e-17
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 1e-12
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 7e-11
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 2e-08
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 4e-08
PTZ00462 1004 PTZ00462, PTZ00462, Serine-repeat antigen protein; 1e-07
PTZ00049693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 3e-07
COG4870372 COG4870, COG4870, Cysteine protease [Posttranslati 4e-06
PTZ00364548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 2e-05
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 4e-04
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
 Score =  173 bits (441), Expect = 2e-54
 Identities = 67/152 (44%), Positives = 78/152 (51%), Gaps = 17/152 (11%)

Query: 63  LVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKE-EIRVKIQS 121
           LVDCD  + GC GGL  NAFE I     GG+  E DYPY   +  C   K      KI+ 
Sbjct: 53  LVDCDTGNNGCNGGLPDNAFEYIKKN--GGIVTESDYPYTAHDGTCKFKKSNSKYAKIKG 110

Query: 122 YVNVSS-DETEMAKYLVKNGPMAVAINANAM--QFYFGGVSHPLKFLCKGGMDNLDHGVL 178
           Y +V   DE  +   L KNGP++VAI+A     Q Y  GV    +  C G    LDH VL
Sbjct: 111 YGDVPYNDEEALQAALAKNGPVSVAIDAYEDDFQLYKSGVYKHTE--CSG---ELDHAVL 165

Query: 179 IVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEK 210
           IVGYG           PYWI+KNSWG  WGE 
Sbjct: 166 IVGYGTENGV------PYWIVKNSWGTDWGEN 191


Length = 213

>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|185641 PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 240
KOG1542|consensus372 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543|consensus325 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PTZ00364548 dipeptidyl-peptidase I precursor; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
PTZ00462 1004 Serine-repeat antigen protein; Provisional 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 99.97
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 99.97
KOG1544|consensus470 99.96
cd00585437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 99.72
COG4870372 Cysteine protease [Posttranslational modification, 99.58
PF03051438 Peptidase_C1_2: Peptidase C1-like family This fami 99.03
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 98.82
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 98.52
COG3579444 PepC Aminopeptidase C [Amino acid transport and me 97.57
PF13529144 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3 92.05
PF14399 317 Transpep_BrtH: NlpC/p60-like transpeptidase 88.92
PF09778212 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IP 88.2
PF05543175 Peptidase_C47: Staphopain peptidase C47; InterPro: 82.19
KOG4128|consensus457 81.72
>KOG1542|consensus Back     alignment and domain information
Probab=100.00  E-value=4.2e-57  Score=383.62  Aligned_cols=210  Identities=46%  Similarity=0.812  Sum_probs=186.5

Q ss_pred             CChhhHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHhc---CCc------------------------------
Q psy1727          10 HDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIR---GEG------------------------------   56 (240)
Q Consensus        10 ~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~i~~~---n~g------------------------------   56 (240)
                      +..+..+++|..|+.+|+|+|.+.+|..+|+.||++|+..++++   ++|                              
T Consensus        62 ~~~l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSDlT~eEFkk~~l~~~~~~~~  141 (372)
T KOG1542|consen   62 PRGLGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSDLTEEEFKKIYLGVKRRGSK  141 (372)
T ss_pred             CcccchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhhcCHHHHHHHhhcccccccc
Confidence            33455589999999999999999999999999999999999543   232                              


Q ss_pred             --------------------------------------------ceece-----------------eEecCCCCCCCCCC
Q psy1727          57 --------------------------------------------THLAL-----------------KLVDCDKVDAGCGG   75 (240)
Q Consensus        57 --------------------------------------------~~g~l-----------------qlvDCs~~~~gC~G   75 (240)
                                                                  +||+|                 |||||+.++.||+|
T Consensus       142 ~~~~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~LvsLSEQeLvDCD~~d~gC~G  221 (372)
T KOG1542|consen  142 LPGDAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLVSLSEQELVDCDSCDNGCNG  221 (372)
T ss_pred             CccccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCcccccchhhhhcccCcCCcCCC
Confidence                                                        24443                 99999999999999


Q ss_pred             CccchHHHHHHHhcCCCccCCcccccccCCC-cccCCcccceeEEeEeeeechhHHHHHHHHHhCCCeEEEEeccccccc
Q psy1727          76 GLMSNAFETIISKLGGGLEGEKDYPYKGSNR-ACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFY  154 (240)
Q Consensus        76 G~~~~A~~yi~~~~~~Gi~~e~~yPY~~~~~-~C~~~~~~~~~~i~~~~~v~~~~~~i~~~l~~~GPv~v~~~~~~f~~Y  154 (240)
                      |.+..||+|++ +. +||..|.+|||++..+ .|..++....+.|.+|..++.||++|.++|.++|||+|+|++..+|+|
T Consensus       222 Gl~~nA~~~~~-~~-gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~~nE~~ia~wLv~~GPi~vgiNa~~mQ~Y  299 (372)
T KOG1542|consen  222 GLMDNAFKYIK-KA-GGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLSNNEDQIAAWLVTFGPLSVGINAKPMQFY  299 (372)
T ss_pred             CChhHHHHHHH-Hh-CCccccccCCccccCCCccccchhhceEEEeccEecCCCHHHHHHHHHhcCCeEEEEchHHHHHh
Confidence            99999999977 66 7999999999999997 999999999999999999999999999999999999999998889999


Q ss_pred             cCCcccCCCcccCCCCCCCCccEEEEEEeecccccccCCcCEEEEecccCCCcCCCCcceEEEECCCCCccccceeE
Q psy1727         155 FGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVTK  231 (240)
Q Consensus       155 ~~Gv~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~yWivkNSWG~~WG~~G~~y~~i~~~~~~~~g~~~~~  231 (240)
                      .+||+.+....|+.  ..++|+|||||||...     -.++|||||||||+.|||+|  ||||.||. +.||++..+
T Consensus       300 rgGV~~P~~~~Cs~--~~~~HaVLlvGyG~~g-----~~~PYWIVKNSWG~~WGE~G--Y~~l~RG~-N~CGi~~mv  366 (372)
T KOG1542|consen  300 RGGVSCPSKYICSP--KLLNHAVLLVGYGSSG-----YEKPYWIVKNSWGTSWGEKG--YYKLCRGS-NACGIADMV  366 (372)
T ss_pred             cccccCCCcccCCc--cccCceEEEEeecCCC-----CCCceEEEECCccccccccc--eEEEeccc-cccccccch
Confidence            99999995558996  5599999999999882     27899999999999999999  99999996 567777443



>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543|consensus Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>KOG1544|consensus Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>PF13529 Peptidase_C39_2: Peptidase_C39 like family; PDB: 3ERV_A Back     alignment and domain information
>PF14399 Transpep_BrtH: NlpC/p60-like transpeptidase Back     alignment and domain information
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate Back     alignment and domain information
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>KOG4128|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 2e-32
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 2e-28
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 1e-26
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 2e-26
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 2e-26
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 2e-26
2fo5_A262 Crystal Structure Of Recombinant Barley Cysteine En 1e-21
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 3e-21
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 8e-21
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 1e-20
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 1e-20
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-20
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 2e-20
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 2e-20
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-20
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 2e-20
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 2e-20
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 2e-20
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 2e-20
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 2e-20
3of8_A221 Structural Basis For Reversible And Irreversible In 2e-20
3h89_A220 A Combined Crystallographic And Molecular Dynamics 2e-20
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 2e-20
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 2e-20
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 2e-20
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 3e-19
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 4e-19
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 4e-19
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 8e-19
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 9e-19
2vhs_A217 Cathsilicatein, A Chimera Length = 217 1e-18
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 4e-18
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 5e-18
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 9e-18
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 1e-17
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 2e-17
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 6e-17
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 1e-16
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 5e-16
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 6e-16
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 6e-16
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 7e-16
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 8e-16
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 9e-16
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 1e-15
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 1e-15
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 1e-15
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 2e-15
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 2e-15
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 2e-15
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 2e-15
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 2e-15
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 2e-15
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 2e-15
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 4e-15
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 5e-15
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 6e-15
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 7e-15
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 2e-14
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 2e-14
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 3e-14
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 4e-14
2act_A220 Crystallographic Refinement Of The Structure Of Act 6e-14
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 3e-13
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 4e-13
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 6e-10
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 7e-10
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 7e-10
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 8e-10
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 9e-10
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 1e-09
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 1e-09
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 2e-09
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 8e-09
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 6e-08
2wbf_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 6e-07
3ch2_X265 Crystal Structure Analysis Of Sera5e From Plasmodiu 1e-06
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 2e-05
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 5e-05
1ef7_A242 Crystal Structure Of Human Cathepsin X Length = 242 5e-05
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 1e-04
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-04
1sp4_B205 Crystal Structure Of Ns-134 In Complex With Bovine 2e-04
1qdq_A253 X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 3e-04
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 4e-04
1ito_A256 Crystal Structure Analysis Of Bovine Spleen Catheps 5e-04
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 6e-04
1pci_A322 Procaricain Length = 322 8e-04
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure

Iteration: 1

Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/146 (48%), Positives = 92/146 (63%), Gaps = 10/146 (6%) Query: 65 DCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVN 124 DCDK+D C GGL SNA+ I K GGLE E DY Y+G ++C + E+ +V IQ V Sbjct: 55 DCDKMDKACMGGLPSNAYSAI--KNLGGLETEDDYSYQGHMQSCQFSAEKAKVYIQDSVE 112 Query: 125 VSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGV 184 +S +E ++A +L K GP++VAINA MQFY G+S PL+ LC + +DH VL+VGYG Sbjct: 113 LSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWL--IDHAVLLVGYGQ 170 Query: 185 HKTKFTHKIQPYWIIKNSWGPHWGEK 210 P+W IKNSWG WGEK Sbjct: 171 RSDV------PFWAIKNSWGTDWGEK 190
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|2WBF|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum With Loop 690-700 Ordered Length = 265 Back     alignment and structure
>pdb|3CH2|X Chain X, Crystal Structure Analysis Of Sera5e From Plasmodium Falciparum Length = 265 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure
>pdb|1EF7|A Chain A, Crystal Structure Of Human Cathepsin X Length = 242 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|1SP4|B Chain B, Crystal Structure Of Ns-134 In Complex With Bovine Cathepsin B: A Two Headed Epoxysuccinyl Inhibitor Extends Along The Whole Active Site Cleft Length = 205 Back     alignment and structure
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074 Complex Length = 253 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1ITO|A Chain A, Crystal Structure Analysis Of Bovine Spleen Cathepsin B- E64c Complex Length = 256 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query240
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 8e-72
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 4e-69
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 5e-60
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 8e-59
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 1e-58
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 8e-58
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 3e-57
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 5e-57
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 4e-08
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 4e-54
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-53
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-06
1cqd_A221 Protein (protease II); cysteine protease, glycopro 1e-52
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 7e-52
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 9e-52
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 2e-51
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 3e-51
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 5e-51
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 7e-51
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 1e-50
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 1e-50
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 2e-50
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 2e-50
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-08
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 3e-50
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 6e-50
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 8e-08
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 6e-50
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 8e-50
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 1e-06
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 3e-49
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-48
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 7e-08
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 2e-48
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 3e-48
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 7e-48
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 9e-08
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 8e-47
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 5e-08
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 4e-45
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 2e-37
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 4e-36
3u8e_A222 Papain-like cysteine protease; papain-like cystein 6e-36
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 9e-31
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 1e-30
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 2e-30
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 7e-29
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 7e-09
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 6e-06
1qzv_F154 Plant photosystem I: subunit PSAF; photosynthesis, 2e-04
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
 Score =  217 bits (555), Expect = 8e-72
 Identities = 71/148 (47%), Positives = 93/148 (62%), Gaps = 10/148 (6%)

Query: 63  LVDCDKVDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSY 122
           L+DCDK+D  C GGL SNA+  I +   GGLE E DY Y+G  ++C  + E+ +V IQ  
Sbjct: 53  LLDCDKMDKACMGGLPSNAYSAIKNL--GGLETEDDYSYQGHMQSCQFSAEKAKVYIQDS 110

Query: 123 VNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGY 182
           V +S +E ++A +L K GP++VAINA  MQFY  G+S PL+ LC      +DH VL+VGY
Sbjct: 111 VELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLC--SPWLIDHAVLLVGY 168

Query: 183 GVHKTKFTHKIQPYWIIKNSWGPHWGEK 210
           G           P+W IKNSWG  WGEK
Sbjct: 169 GQRSDV------PFWAIKNSWGTDWGEK 190


>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A* Length = 222 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A Length = 220 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2cb5_A453 Protein (bleomycin hydrolase); aminopeptidase, cys 99.95
2e01_A457 Cysteine proteinase 1; bleomycin hydrolase, thiol 99.94
3pw3_A383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.8
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 98.94
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 98.91
1pxv_A183 Cysteine protease; hydrolase; 1.80A {Staphylococcu 92.35
1cv8_A174 Staphopain; cysteine protease, thiol protease, pap 85.83
1x9y_A367 Cysteine proteinase; half-barrel, barrel-sandwich- 83.92
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=5e-55  Score=382.88  Aligned_cols=208  Identities=32%  Similarity=0.620  Sum_probs=183.4

Q ss_pred             hhHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHhcCC----c--------------------------------
Q psy1727          13 LEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGE----G--------------------------------   56 (240)
Q Consensus        13 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~i~~~n~----g--------------------------------   56 (240)
                      ..++.+|++||++|+|.|.+.+|+.+||+||++|+++|+++|.    |                                
T Consensus        16 ~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~   95 (331)
T 3qj3_A           16 TFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADL   95 (331)
T ss_dssp             HHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSST
T ss_pred             HHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhccccccccc
Confidence            3357899999999999999999999999999999999975542    1                                


Q ss_pred             -------------------------------------------------c-----------eec--e------eEecCCC
Q psy1727          57 -------------------------------------------------T-----------HLA--L------KLVDCDK   68 (240)
Q Consensus        57 -------------------------------------------------~-----------~g~--l------qlvDCs~   68 (240)
                                                                       +           +|.  +      |||||+.
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~  175 (331)
T 3qj3_A           96 HKNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVP  175 (331)
T ss_dssp             TTTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCT
T ss_pred             cccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhcc
Confidence                                                             0           111  1      8999998


Q ss_pred             CCCCCCCCccchHHHHHHHhcCCCccCCcccccccCCCcccCCcccceeEEeEeeeech-hHHHHHHHHHhCCCeEEEEe
Q psy1727          69 VDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSS-DETEMAKYLVKNGPMAVAIN  147 (240)
Q Consensus        69 ~~~gC~GG~~~~A~~yi~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~i~~~l~~~GPv~v~~~  147 (240)
                      .+.||+||++..||+|++ ++ +||++|++|||.+..+.|...+....+++.+|..++. ++++|+++|+++|||+|+|+
T Consensus       176 ~~~GC~GG~~~~a~~yi~-~~-~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~GPV~v~i~  253 (331)
T 3qj3_A          176 NALGCSGGWMNDAFTYVA-QN-GGIDSEGAYPYEMADGNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFD  253 (331)
T ss_dssp             TSCGGGCCCHHHHHHHHH-HH-TCEEBTTTSCCCSSCCCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHCCEEEEEC
T ss_pred             CCCCCCCCCHHHHHHHHH-Hc-CCcCcccccCccCCCCCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCCCEEEEEE
Confidence            889999999999999998 76 7999999999999999999887777889999999986 79999999999999999999


Q ss_pred             ccc-cccccCCcccCCCcccCCCCCCCCccEEEEEEeecccccccCCcCEEEEecccCCCcCCCCcceEEEECCCCCccc
Q psy1727         148 ANA-MQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWG  226 (240)
Q Consensus       148 ~~~-f~~Y~~Gv~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~yWivkNSWG~~WG~~G~~y~~i~~~~~~~~g  226 (240)
                      +.. |++|++|||..+  .|..  ..++|||+|||||++      +|++|||||||||+.||++|  ||||+|+.++.||
T Consensus       254 a~~~f~~Y~~Gvy~~~--~c~~--~~~~HaV~iVGyg~~------~g~~yWivkNSWG~~WGe~G--Y~~i~r~~~n~Cg  321 (331)
T 3qj3_A          254 ADDPFGSYSGGVYYNP--TCET--NKFTHAVLIVGYGNE------NGQDYWLVKNSWGDGWGLDG--YFKIARNANNHCG  321 (331)
T ss_dssp             CCTTGGGEEEEEECCT--TCCS--SCCCEEEEEEEEEEE------TTEEEEEEECSBCTTSTBTT--EEEEECSSSSGGG
T ss_pred             cccccccccCceEeCC--CCCC--CcCCEEEEEEEEecc------CCceEEEEEcCCCCCcCCCC--EEEEEcCCCCccC
Confidence            976 999999999987  7875  568999999999988      78999999999999999999  9999999878999


Q ss_pred             cceeEEecC
Q psy1727         227 EQVTKSIYS  235 (240)
Q Consensus       227 ~~~~~~~~~  235 (240)
                      +... +.||
T Consensus       322 I~~~-~~~p  329 (331)
T 3qj3_A          322 IAGV-ASVP  329 (331)
T ss_dssp             TTTS-CEEE
T ss_pred             cCCc-eeee
Confidence            9843 4444



>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A* Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A Back     alignment and structure
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1 Back     alignment and structure
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 240
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 8e-24
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 3e-05
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 2e-22
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 2e-19
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 6e-19
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 1e-17
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 3e-17
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 3e-17
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 5e-17
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 2e-16
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 2e-16
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 4e-16
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 7e-16
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 1e-15
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 7e-15
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 4e-14
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 4e-14
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 4e-14
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 4e-07
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 6e-14
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-12
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 7e-12
d3gcba_458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 7e-08
d2cb5a_453 d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapi 2e-04
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
 Score = 95.1 bits (235), Expect = 8e-24
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 60  ALKLVDCDK--VDAGCGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRV 117
              LVDC     + GC GGLM  AF+ +     GGL+ E+ YPY+ +  +C  N +    
Sbjct: 146 EQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN--GGLDSEESYPYEATEESCKYNPKYSVA 203

Query: 118 KIQSYVNVSSDETEMAKYLVKNGPMAVAINANAMQFYFGGVSHPLKFLCKGGMDNLDHGV 177
               +V++   E  + K +   GP++VAI+A    F F       +  C    +++DHGV
Sbjct: 204 NDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC--SSEDMDHGV 261

Query: 178 LIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWG 222
           L+VGYG   T+  +    YW++KNSWG  WG       + K+   
Sbjct: 262 LVVGYGFESTESDNN--KYWLVKNSWGEEWGMGGY-VKMAKDRRN 303


>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query240
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 99.98
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 99.98
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 99.98
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 99.97
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 99.97
d3gcba_458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 99.22
d2cb5a_453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 98.95
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=9.1e-51  Score=352.72  Aligned_cols=214  Identities=32%  Similarity=0.652  Sum_probs=177.7

Q ss_pred             CCChhhHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHHHHhcCC----c----------------------------
Q psy1727           9 HHDKLEHVAMFNHFLEKHNKSYATKEEYHKRLRIFRANLKKIQIRGE----G----------------------------   56 (240)
Q Consensus         9 ~~~~~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~n~~~i~~~n~----g----------------------------   56 (240)
                      .++.|  +.+|++||++|+|.|.+ +|+.+||+||.+|+++|+++|.    |                            
T Consensus         4 ~~~~l--~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~   80 (316)
T d1cs8a_           4 FDHSL--EAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQN   80 (316)
T ss_dssp             CCGGG--HHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCC
T ss_pred             ccHHH--HHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhccccc
Confidence            44444  68999999999999977 5778999999999999976653    1                            


Q ss_pred             ---------------------------------------------ceece-----------------eEecCCC--CCCC
Q psy1727          57 ---------------------------------------------THLAL-----------------KLVDCDK--VDAG   72 (240)
Q Consensus        57 ---------------------------------------------~~g~l-----------------qlvDCs~--~~~g   72 (240)
                                                                   ++++|                 |||||+.  .+.+
T Consensus        81 ~~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~~~~~~  160 (316)
T d1cs8a_          81 RKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG  160 (316)
T ss_dssp             CCCSCCEECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCG
T ss_pred             cccccCccccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhccccccCCC
Confidence                                                         11111                 9999986  5789


Q ss_pred             CCCCccchHHHHHHHhcCCCccCCcccccccCCCcccCCcccceeEEeEeeeechhHHHHHHHHHhCCCeEEEEeccc--
Q psy1727          73 CGGGLMSNAFETIISKLGGGLEGEKDYPYKGSNRACHLNKEEIRVKIQSYVNVSSDETEMAKYLVKNGPMAVAINANA--  150 (240)
Q Consensus        73 C~GG~~~~A~~yi~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~i~~~l~~~GPv~v~~~~~~--  150 (240)
                      |.||++..||+|++ .+ +++++|..|||.+....|...+......+..+.....+++.|+++|+.+|||+|++++..  
T Consensus       161 c~gg~~~~a~~y~~-~~-g~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~~~~~~  238 (316)
T d1cs8a_         161 CNGGLMDYAFQYVQ-DN-GGLDSEESYPYEATEESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHES  238 (316)
T ss_dssp             GGCBCHHHHHHHHH-HH-TCEEBTTTSCCCSSCCCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCCSHH
T ss_pred             CCCCchHHHHHHHH-hc-CcccccccccccccccccccccccccccccccccccCcHHHHHHHHHHhCCeEEEEEeccch
Confidence            99999999999999 87 568899999999998888876666666677777777789999999999999999999864  


Q ss_pred             cccccCCcccCCCcccCCCCCCCCccEEEEEEeecccccccCCcCEEEEecccCCCcCCCCcceEEEECCCCCcccccee
Q psy1727         151 MQFYFGGVSHPLKFLCKGGMDNLDHGVLIVGYGVHKTKFTHKIQPYWIIKNSWGPHWGEKTMPFWIIKNSWGPRWGEQVT  230 (240)
Q Consensus       151 f~~Y~~Gv~~~~~~~c~~~~~~~~Hav~iVGyg~~~~~~~~~g~~yWivkNSWG~~WG~~G~~y~~i~~~~~~~~g~~~~  230 (240)
                      |++|++|||...  .|+.  ..++|||+|||||.+..  ..++++|||||||||++|||+|  ||||+|+..+.||+. .
T Consensus       239 f~~y~~Gi~~~~--~c~~--~~~nHaV~iVGyG~d~~--~~~g~~YWIikNSWG~~WGe~G--Y~ri~r~~~n~CGI~-~  309 (316)
T d1cs8a_         239 FLFYKEGIYFEP--DCSS--EDMDHGVLVVGYGFEST--ESDNNKYWLVKNSWGEEWGMGG--YVKMAKDRRNHCGIA-S  309 (316)
T ss_dssp             HHTEEEEEECCT--TCCS--SCCCEEEEEEEEEEECC--SSCCEEEEEEECSBCTTSTBTT--EEEEECSSSSGGGTT-T
T ss_pred             hccccCCcccCC--CCCC--CcCCEEEEEEEEccccc--CCCCCeEEEEEeCCCCCcccCC--EEEEeeCCCCcCccC-C
Confidence            999999999877  7875  56899999999997621  1257899999999999999999  999999987899998 4


Q ss_pred             EEecCC
Q psy1727         231 KSIYSS  236 (240)
Q Consensus       231 ~~~~~~  236 (240)
                      .+.||.
T Consensus       310 ~~~yP~  315 (316)
T d1cs8a_         310 AASYPT  315 (316)
T ss_dssp             SCEEEC
T ss_pred             eeeeee
Confidence            456653



>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure