Psyllid ID: psy17573

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF
Secondary Structure (PSIPRED)
ccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
wfdgfnweglrnrtlippilpkirsqtdssnfdeyppdqaiflsfpcrwfdgfnweglrnrtlippilpkirsqtdssnfdeyppdqdpppaddltgwdadf
Flexible Loop (DISEMBL)
wfdgfnweglrnrtlippilpkIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFdeyppdqdpppaddlTGWDADF
Low Complexity Region (SEG)
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFdeyppdqdpppaddLTGWDADF
Disordered region (IsUnstruct)
***GFNWEGLRNRTLIPPILPKI***********YPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILP*********************************
Disordered Region (DISOPRED)
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF
Disordered Region (DISEMBL)
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF
Disordered Region (DISPRO)
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD******LT*W****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
Q13976	671	cGMP-dependent protein ki	yes	N/A	0.539	0.081	0.636	3e-18
P00516	671	cGMP-dependent protein ki	yes	N/A	0.539	0.081	0.636	3e-18
P0C605	671	cGMP-dependent protein ki	yes	N/A	0.539	0.081	0.636	3e-18
O77676	671	cGMP-dependent protein ki	yes	N/A	0.539	0.081	0.636	5e-18
O76360	780	cGMP-dependent protein ki	yes	N/A	0.529	0.069	0.636	2e-17
A8X6H1	749	cGMP-dependent protein ki	N/A	N/A	0.529	0.072	0.618	5e-17
Q13237	762	cGMP-dependent protein ki	no	N/A	0.529	0.070	0.509	2e-12
Q61410	762	cGMP-dependent protein ki	no	N/A	0.529	0.070	0.490	7e-12
Q64595	762	cGMP-dependent protein ki	no	N/A	0.529	0.070	0.490	7e-12
Q03042	768	cGMP-dependent protein ki	yes	N/A	0.529	0.070	0.509	5e-11

>sp|Q13976|KGP1_HUMAN cGMP-dependent protein kinase 1 OS=Homo sapiens GN=PRKG1 PE=1 SV=3

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1EC: 2

>sp|P00516|KGP1_BOVIN cGMP-dependent protein kinase 1 OS=Bos taurus GN=PRKG1 PE=1 SV=2

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|P0C605|KGP1_MOUSE cGMP-dependent protein kinase 1 OS=Mus musculus GN=Prkg1 PE=1 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O77676|KGP1_RABIT cGMP-dependent protein kinase 1 OS=Oryctolagus cuniculus GN=PRKG1 PE=1 SV=3

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDGFPEDNDEPPPDDNSGWDIDF 671

Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|O76360|EGL4_CAEEL cGMP-dependent protein kinase egl-4 OS=Caenorhabditis elegans GN=egl-4 PE=1 SV=2

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           RWF GF+WEGLR+RTL PPILPK+ +  D +NFD YPPD D PP D+ +GWD  F
Sbjct: 727 RWFMGFDWEGLRSRTLKPPILPKVSNPADVTNFDNYPPDNDVPP-DEFSGWDEGF 780

Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|A8X6H1|EGL4_CAEBR cGMP-dependent protein kinase egl-4 OS=Caenorhabditis briggsae GN=egl-4 PE=3 SV=2

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/55 (61%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           RWF GF+WEGLR +TL PPILPK+ +  D +NFD YPPD D PP D+ +GWD  F
Sbjct: 696 RWFMGFDWEGLRTKTLKPPILPKVNNPADVTNFDNYPPDNDVPP-DEFSGWDEGF 749

Promotes chemoreceptor gene expression in response to increased cGMP levels by antagonizing the gene repression functions of the class II HDAC hda-4 and the mef-2 transcription factor. Represses body size and lifespan through the dbl-1 and insulin pathways, respectively. May also signal through daf-3 and/or daf-5. Role in egg-laying and dauer formation.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q13237|KGP2_HUMAN cGMP-dependent protein kinase 2 OS=Homo sapiens GN=PRKG2 PE=1 SV=1

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           RW +GFNWEGL+ R+L  P+  +++   D S FD+YPP++  PP D+L+GWD DF
Sbjct: 709 RWLNGFNWEGLKARSLPSPLQRELKGPIDHSYFDKYPPEKGMPP-DELSGWDKDF 762

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q61410|KGP2_MOUSE cGMP-dependent protein kinase 2 OS=Mus musculus GN=Prkg2 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           RW +GFNWEGL+ R+L  P+  ++    D S FD+YPP++  PP D+++GWD DF
Sbjct: 709 RWLNGFNWEGLKARSLPSPLRRELSGPIDHSYFDKYPPEKGVPP-DEMSGWDKDF 762

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q64595|KGP2_RAT cGMP-dependent protein kinase 2 OS=Rattus norvegicus GN=Prkg2 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           RW +GFNWEGL+ R+L  P+  ++    D S FD+YPP++  PP D+++GWD DF
Sbjct: 709 RWLNGFNWEGLKARSLPSPLRRELSGPIDHSYFDKYPPEKGVPP-DEMSGWDKDF 762

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

>sp|Q03042|KGP1_DROME cGMP-dependent protein kinase, isozyme 1 OS=Drosophila melanogaster GN=Pkg21D PE=1 SV=2

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF GF+W+GL ++ LIPP +  I   TD   FD +P D + PP D+L+GWDADF
Sbjct: 715 KWFLGFDWDGLASQLLIPPFVRPIAHPTDVRYFDRFPCDLNEPP-DELSGWDADF 768

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
321473349	685	hypothetical protein DAPPUDRAFT_194528 [	0.539	0.080	0.745	5e-21
449662592	599	PREDICTED: cGMP-dependent protein kinase	0.529	0.090	0.672	2e-17
307171913	682	cGMP-dependent protein kinase, isozyme 2	0.539	0.080	0.709	2e-17
194205910	671	PREDICTED: cGMP-dependent protein kinase	0.539	0.081	0.636	9e-17
344275005	671	PREDICTED: cGMP-dependent protein kinase	0.539	0.081	0.636	1e-16
426252721	664	PREDICTED: cGMP-dependent protein kinase	0.539	0.082	0.636	1e-16
332212184	671	PREDICTED: cGMP-dependent protein kinase	0.539	0.081	0.636	1e-16
27806091	671	cGMP-dependent protein kinase 1 [Bos tau	0.539	0.081	0.636	1e-16
148612818	671	cGMP-dependent protein kinase 1 isoform	0.539	0.081	0.636	1e-16
113205750	671	cGMP-dependent protein kinase 1 [Sus scr	0.539	0.081	0.636	1e-16

>gi|321473349|gb|EFX84317.1| hypothetical protein DAPPUDRAFT_194528 [Daphnia pulex]

 Score =  105 bits (261), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/55 (74%), Positives = 47/55 (85%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WFDGFNWEGLRNRTL PPI+P+I+S  DSSNFDEYPPD D  P DD++GWD DF
Sbjct: 631 KWFDGFNWEGLRNRTLTPPIIPQIKSAMDSSNFDEYPPDMDGLPPDDVSGWDVDF 685

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449662592|ref|XP_002156911.2| PREDICTED: cGMP-dependent protein kinase 1-like [Hydra magnipapillata]

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/55 (67%), Positives = 46/55 (83%), Gaps = 1/55 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WFDGFNW+GL+NR L PPI+PKI+S  D+SNFD+YP D + PP DD+TGWD DF
Sbjct: 546 KWFDGFNWDGLKNRKLGPPIIPKIKSPLDASNFDDYPKDDEIPP-DDVTGWDKDF 599

Source: Hydra magnipapillata

Species: Hydra magnipapillata

Genus: Hydra

Family: Hydridae

Order: Hydroida

Class: Hydrozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|307171913|gb|EFN63550.1| cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 [Camponotus floridanus]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 47/55 (85%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WFDGFNWEGLR RTL PPILP+++S TD++NFD YP D DPPP DD++GWD DF
Sbjct: 628 KWFDGFNWEGLRTRTLEPPILPRVQSATDTTNFDAYPADTDPPPLDDISGWDNDF 682

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194205910|ref|XP_001917720.1| PREDICTED: cGMP-dependent protein kinase 1 isoform 2 [Equus caballus]

 Score = 90.9 bits (224), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Source: Equus caballus

Species: Equus caballus

Genus: Equus

Family: Equidae

Order: Perissodactyla

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|344275005|ref|XP_003409304.1| PREDICTED: cGMP-dependent protein kinase 1-like isoform 2 [Loxodonta africana]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWDIDF 671

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426252721|ref|XP_004020051.1| PREDICTED: cGMP-dependent protein kinase 1 [Ovis aries]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 610 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 664

Source: Ovis aries

Species: Ovis aries

Genus: Ovis

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|332212184|ref|XP_003255198.1| PREDICTED: cGMP-dependent protein kinase 1 isoform 2 [Nomascus leucogenys]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|27806091|ref|NP_776861.1| cGMP-dependent protein kinase 1 [Bos taurus] gi|125377|sp|P00516.2|KGP1_BOVIN RecName: Full=cGMP-dependent protein kinase 1; Short=cGK 1; Short=cGK1; AltName: Full=cGMP-dependent protein kinase I; Short=cGKI gi|212|emb|CAA34214.1| unnamed protein product [Bos taurus] gi|296472851|tpg|DAA14966.1| TPA: cGMP-dependent protein kinase 1 [Bos taurus] gi|226414|prf||1511094A cGMP dependent protein kinase I alpha

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|148612818|ref|NP_001091982.1| cGMP-dependent protein kinase 1 isoform 1 [Homo sapiens] gi|109089775|ref|XP_001099261.1| PREDICTED: cGMP-dependent protein kinase 1 isoform 1 [Macaca mulatta] gi|114630569|ref|XP_001162783.1| PREDICTED: cGMP-dependent protein kinase 1 isoform 2 [Pan troglodytes] gi|6225588|sp|Q13976.3|KGP1_HUMAN RecName: Full=cGMP-dependent protein kinase 1; Short=cGK 1; Short=cGK1; AltName: Full=cGMP-dependent protein kinase I; Short=cGKI gi|1255602|dbj|BAA08297.1| cGMP-dependent protein kinase type I alpha [Homo sapiens] gi|3063840|emb|CAB07436.1| cGMP-dependent protein kinase type I alpha [Homo sapiens] gi|119574526|gb|EAW54141.1| protein kinase, cGMP-dependent, type I, isoform CRA_b [Homo sapiens] gi|410210994|gb|JAA02716.1| protein kinase, cGMP-dependent, type I [Pan troglodytes] gi|410263736|gb|JAA19834.1| protein kinase, cGMP-dependent, type I [Pan troglodytes] gi|410292180|gb|JAA24690.1| protein kinase, cGMP-dependent, type I [Pan troglodytes] gi|410353187|gb|JAA43197.1| protein kinase, cGMP-dependent, type I [Pan troglodytes]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDNDEPPPDDNSGWDIDF 671

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|113205750|ref|NP_001038039.1| cGMP-dependent protein kinase 1 [Sus scrofa] gi|73425907|gb|AAZ75707.1| cGMP-dependent protein kinase type I [Sus scrofa]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/55 (63%), Positives = 42/55 (76%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D D PP DD +GWD DF
Sbjct: 617 KWFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPEDSDEPPPDDNSGWDIDF 671

Source: Sus scrofa

Species: Sus scrofa

Genus: Sus

Family: Suidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|Q5JP05	283	PRKG1 "cGMP-dependent protein	0.372	0.134	0.657	6e-11
WB|WBGene00001173	780	egl-4 [Caenorhabditis elegans	0.519	0.067	0.547	8.4e-11
UNIPROTKB|F1SD02	459	PRKG1 "Uncharacterized protein	0.372	0.082	0.657	2.1e-10
RGD|1587390	459	Prkg1 "protein kinase, cGMP-de	0.372	0.082	0.657	2.1e-10
UNIPROTKB|J9NWY9	474	PRKG1 "Uncharacterized protein	0.372	0.080	0.657	2.2e-10
UNIPROTKB|J9JHE0	489	PRKG1 "Uncharacterized protein	0.372	0.077	0.657	2.3e-10
UNIPROTKB|Q5SQU3	659	PRKG1 "cGMP-dependent protein	0.372	0.057	0.657	3.7e-10
ZFIN|ZDB-GENE-040426-1308	667	prkg1a "protein kinase, cGMP-d	0.372	0.056	0.631	3.8e-10
MGI|MGI:108174	671	Prkg1 "protein kinase, cGMP-de	0.372	0.056	0.657	3.8e-10
UNIPROTKB|P00516	671	PRKG1 "cGMP-dependent protein	0.372	0.056	0.657	3.8e-10

UNIPROTKB|Q5JP05 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 155 (59.6 bits), Expect = 6.0e-11, P = 6.0e-11
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   230 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 267

GO:0005524 "ATP binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

WB|WBGene00001173 egl-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 162 (62.1 bits), Expect = 8.4e-11, P = 8.4e-11
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGF 53
             WF GF+WEGLR+RTL PPILPK+ +  D +NFD YPPD  +       W +GF
Sbjct:   728 WFMGFDWEGLRSRTLKPPILPKVSNPADVTNFDNYPPDNDVPPDEFSGWDEGF 780

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA;IDA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0001932 "regulation of protein phosphorylation" evidence=IEA

GO:0005952 "cAMP-dependent protein kinase complex" evidence=IEA

GO:0008603 "cAMP-dependent protein kinase regulator activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0030163 "protein catabolic process" evidence=IMP

GO:0040015 "negative regulation of multicellular organism growth" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0046621 "negative regulation of organ growth" evidence=IMP

GO:0030308 "negative regulation of cell growth" evidence=IMP

GO:0030431 "sleep" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IDA

GO:0046662 "regulation of oviposition" evidence=IMP

GO:0008286 "insulin receptor signaling pathway" evidence=IGI

UNIPROTKB|F1SD02 PRKG1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   406 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 443

GO:0090331 "negative regulation of platelet aggregation" evidence=IEA

GO:0043087 "regulation of GTPase activity" evidence=IEA

GO:0030900 "forebrain development" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016358 "dendrite development" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005246 "calcium channel regulator activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0001764 "neuron migration" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|1587390 Prkg1 "protein kinase, cGMP-dependent, type 1" [Rattus norvegicus (taxid:10116)]

 Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   406 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 443

GO:0001764 "neuron migration" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA;ISO

GO:0005246 "calcium channel regulator activity" evidence=ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0007165 "signal transduction" evidence=ISO

GO:0016358 "dendrite development" evidence=ISO

GO:0030553 "cGMP binding" evidence=ISO

GO:0030900 "forebrain development" evidence=ISO

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0090331 "negative regulation of platelet aggregation" evidence=ISO

UNIPROTKB|J9NWY9 PRKG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   421 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 458

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

UNIPROTKB|J9JHE0 PRKG1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   436 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 473

GO:0005524 "ATP binding" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

UNIPROTKB|Q5SQU3 PRKG1 "cGMP-dependent protein kinase 1" [Homo sapiens (taxid:9606)]

 Score = 155 (59.6 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   606 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 643

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1308 prkg1a "protein kinase, cGMP-dependent, type Ia" [Danio rerio (taxid:7955)]

 Score = 155 (59.6 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 24/38 (63%), Positives = 31/38 (81%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNW+GLR  TL+PPI+P + S TD+SNFD +P D
Sbjct:   614 WFEGFNWDGLRKGTLMPPIIPNVTSSTDTSNFDSFPED 651

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0030553 "cGMP binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:108174 Prkg1 "protein kinase, cGMP-dependent, type I" [Mus musculus (taxid:10090)]

 Score = 155 (59.6 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   618 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 655

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001764 "neuron migration" evidence=IMP

GO:0003824 "catalytic activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISO;IDA

GO:0005246 "calcium channel regulator activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA;IMP

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0007165 "signal transduction" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016358 "dendrite development" evidence=IMP

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030553 "cGMP binding" evidence=IDA

GO:0030900 "forebrain development" evidence=IMP

GO:0043087 "regulation of GTPase activity" evidence=ISO

GO:0090331 "negative regulation of platelet aggregation" evidence=ISO

UNIPROTKB|P00516 PRKG1 "cGMP-dependent protein kinase 1" [Bos taurus (taxid:9913)]

 Score = 155 (59.6 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 25/38 (65%), Positives = 30/38 (78%)

Query:     1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
             WF+GFNWEGLR  TL PPI+P + S TD+SNFD +P D
Sbjct:   618 WFEGFNWEGLRKGTLTPPIIPSVASPTDTSNFDSFPED 655

GO:0005829 "cytosol" evidence=TAS

GO:0043087 "regulation of GTPase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005246 "calcium channel regulator activity" evidence=ISS

GO:0004692 "cGMP-dependent protein kinase activity" evidence=ISS

GO:0090331 "negative regulation of platelet aggregation" evidence=ISS

GO:0030553 "cGMP binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P00516	KGP1_BOVIN	2, ., 7, ., 1, 1, ., 1, 2	0.6363	0.5392	0.0819	yes	N/A
Q03042	KGP1_DROME	2, ., 7, ., 1, 1, ., 1, 2	0.5090	0.5294	0.0703	yes	N/A
O76360	EGL4_CAEEL	2, ., 7, ., 1, 1, ., 1, 2	0.6363	0.5294	0.0692	yes	N/A
O77676	KGP1_RABIT	2, ., 7, ., 1, 1, ., 1, 2	0.6363	0.5392	0.0819	yes	N/A
P0C605	KGP1_MOUSE	2, ., 7, ., 1, 1, ., 1, 2	0.6363	0.5392	0.0819	yes	N/A
Q13976	KGP1_HUMAN	2, ., 7, ., 1, 1, ., 1, 2	0.6363	0.5392	0.0819	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	102
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	6e-11
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	2e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-09
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-09
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	2e-08
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-08
smart00133	64	smart00133, S_TK_X, Extension to Ser/Thr-type prot	8e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-07
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-07
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	7e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	8e-06
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-05
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-05
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-05
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	4e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-05
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-05
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	5e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	6e-05
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	6e-05
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-05
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	9e-05
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	1e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-04
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-04
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	4e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	4e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	4e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	5e-04
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	0.001
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.001
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	0.001
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.001
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.002
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.002
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	0.003
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	0.003
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.003
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	0.003
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	0.003
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.004
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	0.004

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 57.0 bits (138), Expect = 6e-11
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTG 97
           +F G +WE +R R    PI+P+++S TD+SNFD++       P      
Sbjct: 298 FFKGVDWEHIRERP--APIIPELKSITDTSNFDDFEEIDLDVPTSPGPP 344

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 16/36 (44%), Positives = 26/36 (72%), Gaps = 2/36 (5%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
           +F G +WE +R R    PI+P+++S TD+SNFD++ 
Sbjct: 298 FFKGVDWEHIRERP--APIIPELKSITDTSNFDDFE 331

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 52.5 bits (127), Expect = 2e-09
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 47  CRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY 83
             WF G +W  L  R +  P +PK++   D+SNFD+Y
Sbjct: 254 HPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 51.0 bits (123), Expect = 5e-09
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY 35
           WF G +W  L  R +  P +PK++   D+SNFD+Y
Sbjct: 256 WFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY 290

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 50.9 bits (122), Expect = 7e-09
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 84
           RWF   +W+ +  R L PPI+PK+    D+SNFD+YP
Sbjct: 255 RWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP 291

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 46.2 bits (110), Expect = 2e-08
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 3  DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           G +W+ L N+ + PP +PKI+S TD+SNFD    ++   L+  
Sbjct: 1  RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETPVLTPV 44

Length = 64

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 49.0 bits (117), Expect = 4e-08
 Identities = 17/36 (47%), Positives = 24/36 (66%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
           WF   +W+ +  R L PPI+PK+    D+SNFD+YP
Sbjct: 256 WFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP 291

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|214529 smart00133, S_TK_X, Extension to Ser/Thr-type protein kinases

 Score = 45.0 bits (107), Expect = 8e-08
 Identities = 17/39 (43%), Positives = 26/39 (66%)

Query: 51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
           G +W+ L N+ + PP +PKI+S TD+SNFD    ++ P
Sbjct: 1  RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDPEFTEETP 39

Length = 64

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 46.5 bits (111), Expect = 2e-07
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
            +F G +WE LR     PP +P++ S  D+SNFD++  D+D 
Sbjct: 286 PFFKGIDWENLRETK--PPFVPELSSPLDTSNFDDFEDDKDL 325

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 45.7 bits (109), Expect = 5e-07
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
           +F G +WE LR     PP +P++ S  D+SNFD++  D
Sbjct: 287 FFKGIDWENLRETK--PPFVPELSSPLDTSNFDDFEDD 322

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 45.3 bits (107), Expect = 7e-07
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE--------YPPDQDPPPADDL 95
           +F G +WE L  R + PP  P IR++ D  NF E        Y P   PP    +
Sbjct: 269 FFKGLDWEALALRKVNPPFRPSIRNELDVGNFAEEFTNLEPVYSPAGTPPSGARV 323

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 43.5 bits (102), Expect = 3e-06
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFD 51
           +F G NW+ + ++ L+PP  P++ S+TD+  FDE    Q I ++ P ++ +
Sbjct: 253 FFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEKYDE 303

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 2/33 (6%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
           +F+G +W+ +RN T   P +P++ S TD+SNFD
Sbjct: 268 FFEGIDWDNIRNST--APYVPEVSSPTDTSNFD 298

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 2/33 (6%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
           +F+G +W+ +RN T   P +P++ S TD+SNFD
Sbjct: 268 FFEGIDWDNIRNST--APYVPEVSSPTDTSNFD 298

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 42.4 bits (100), Expect = 8e-06
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
            +F   NW+ L  R + PP +P I+   D SNFDE
Sbjct: 258 PFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDE 292

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 42.1 bits (99), Expect = 8e-06
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQAIFLSFPCRWFD 51
           +F G +WE L  R + PP  PK++S +D+SNFD           P D+ +  S     F 
Sbjct: 250 FFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKVRLSPVDKKLLASMDQEQFR 309

Query: 52  GFNW 55
           GF++
Sbjct: 310 GFSF 313

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 42.0 bits (99), Expect = 1e-05
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   NW+ L  R + PP +P I+   D SNFDE
Sbjct: 259 FFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDE 292

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ----DPPPADDLTGWDA 100
           +F G NW+ + ++ L+PP  P++ S+TD+  FDE    Q     PP   D  G D 
Sbjct: 253 FFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQTITITPPEKYDEDGMDC 308

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 13/63 (20%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQDPPPADDLTGW 98
           R+F   NW+ +  + L PP  P++ S+TD+  FDE          PPD+     D L   
Sbjct: 252 RFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDRY----DSLGLL 307

Query: 99  DAD 101
             +
Sbjct: 308 QLE 310

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 41.1 bits (96), Expect = 2e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I ++ P R +D      L  
Sbjct: 253 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR-YDSLGLLELDQ 311

Query: 61  RTLIP 65
           RT  P
Sbjct: 312 RTHFP 316

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 40.8 bits (95), Expect = 3e-05
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 9/50 (18%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQD 88
           ++F G  W+ +  + L+PP  P++ S+TD+  FDE          PPDQD
Sbjct: 253 KFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPPDQD 302

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 9/64 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +WE L  R + PP  PK++ +  + NFD++         PPD+ +  +     F 
Sbjct: 259 FFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPPDKLVIANIDQSEFQ 318

Query: 52  GFNW 55
           GF++
Sbjct: 319 GFSF 322

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 16/33 (48%), Positives = 23/33 (69%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
           +F G +WE L  R + PP  PK++S +D+SNFD
Sbjct: 250 FFRGIDWERLEKREIPPPFKPKVKSPSDASNFD 282

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 40.3 bits (94), Expect = 4e-05
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD-EYPPDQAIFLSFPCRWFDGFNWEGLR 59
           +F   +WE L  R + PP  P+I+S+ D SNFD ++  +  +            N +  R
Sbjct: 255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDPVLTPIEESLLPMINQDEFR 314

Query: 60  N 60
           N
Sbjct: 315 N 315

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 40.2 bits (94), Expect = 4e-05
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
           +F   +W  L  R + PP  PKI+++ D +NFD+    ++P
Sbjct: 256 FFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEP 296

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.2 bits (94), Expect = 5e-05
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCR 48
           +F   NW+ +  + L PP  P++ S+TD+  FDE    Q+I ++ P R
Sbjct: 253 FFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITPPDR 300

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 39.9 bits (93), Expect = 5e-05
 Identities = 17/41 (41%), Positives = 24/41 (58%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
           +F   +WE L  R + PP  P+I+S+ D SNFD     +DP
Sbjct: 255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDP 295

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQAIFLSFPCRWFD 51
           +F   +W  L  R + PP  PKI+++ D +NFD+          P D A+        F 
Sbjct: 256 FFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEPVLTPVDPAVIKQINQEEFR 315

Query: 52  GFNW 55
           GF++
Sbjct: 316 GFSF 319

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 39.8 bits (93), Expect = 5e-05
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPP 90
           +F   +W  +RN   +PP +P ++S  D+SNFDE   +    
Sbjct: 265 FFSKIDWNNIRNS--LPPFVPTLKSDDDTSNFDEPEKNSTRR 304

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.7 bits (93), Expect = 6e-05
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 2   FDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFDG 52
           F   +W+ L  + + PP  PKI+ + D SNFD+          PPD+AI  +     F G
Sbjct: 255 FREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPDEAIIRNIDQEEFRG 314

Query: 53  FNW 55
           F++
Sbjct: 315 FSY 317

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 39.8 bits (93), Expect = 6e-05
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP--PDQDPPP 91
            +F G NW+ L  R    PI  +++S  D+SNF++YP  P    PP
Sbjct: 272 PYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDSPVDRLPP 317

Length = 329

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 39.2 bits (91), Expect = 8e-05
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 9/49 (18%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE---------YPPDQ 87
           R+F   NW+ +  + L+PP  P++ S+ D+  FD+          PPD+
Sbjct: 252 RFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR 300

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 39.2 bits (91), Expect = 9e-05
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F G +WE L  R + PP  P IR++ D  NF E
Sbjct: 269 FFKGLDWEALALRKVNPPFRPSIRNELDVGNFAE 302

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 38
           +F   +W  +RN   +PP +P ++S  D+SNFDE   +
Sbjct: 265 FFSKIDWNNIRNS--LPPFVPTLKSDDDTSNFDEPEKN 300

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 38.6 bits (90), Expect = 2e-04
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 7/47 (14%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPP 90
           R  D   WE L  R + PP  PK++ +  + NFD++    PP   PP
Sbjct: 261 RRID---WEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPP 304

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
           +F G NW+ L  R    PI  +++S  D+SNF++YP
Sbjct: 273 YFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYP 308

Length = 329

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           +F G  W+ +  + L+PP  P++ S+TD+  FDE    Q I ++ P
Sbjct: 254 FFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDEEFTAQMITITPP 299

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 50  FDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPP 90
           F   +W+ L  + + PP  PKI+ + D SNFD+      P   PP
Sbjct: 255 FREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPP 299

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 37.6 bits (87), Expect = 4e-04
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
           +F   +W  L  R + PP  PK++S  D SNFD+   ++ P
Sbjct: 250 FFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKP 290

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCR 48
           +F   +W  L  R + PP  PK++S  D SNFD+   ++   LS   R
Sbjct: 250 FFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKPRLSVTDR 297

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   +W+ L  + + PP  P + S  D+SNFDE
Sbjct: 249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE 282

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
           +F   +W+ L  + + PP  P + S  D+SNFDE
Sbjct: 249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE 282

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 51  DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
           D + ++ +R    + P++P++ S  D+SNFD+   D   
Sbjct: 310 DQWTFDNIRET--VAPVVPELSSDIDTSNFDDIEDDDKN 346

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   NW  L  R L PP  PK++S +D SNFD 
Sbjct: 250 FFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 37.2 bits (86), Expect = 5e-04
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
           +F   NW  L  R L PP  PK++S +D SNFD 
Sbjct: 250 FFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 3/51 (5%)

Query: 3   DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPC-RWFDG 52
           D + ++ +R    + P++P++ S  D+SNFD+   D     +FP  + F G
Sbjct: 310 DQWTFDNIRET--VAPVVPELSSDIDTSNFDDIEDDDKNEETFPLPKAFAG 358

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
           +F+G +WE +RN  L  P +P + S +D+SNFD
Sbjct: 268 FFEGIDWENIRN--LEAPYIPDVSSPSDTSNFD 298

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 2/33 (6%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 81
           +F+G +WE +RN  L  P +P + S +D+SNFD
Sbjct: 268 FFEGIDWENIRN--LEAPYIPDVSSPSDTSNFD 298

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 36.3 bits (84), Expect = 0.001
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 10  LRNRTLIPPILP--------KIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNR 61
           L+ +  +PP L         K+  +  SS     P D A   S P  +F   NW+ L  R
Sbjct: 213 LKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP--FFRHVNWDDLLAR 270

Query: 62  TLIPPILPKIRSQTDSSNFDEYPPDQDP 89
            + PP  P ++S+ D S FD     Q P
Sbjct: 271 KVEPPFKPLLQSEEDVSQFDSKFTRQTP 298

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
           +F+G +WE +R R    PI  +I+S  D+SNFDE+P
Sbjct: 295 FFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFP 328

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 17/36 (47%), Positives = 25/36 (69%), Gaps = 2/36 (5%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 84
           +F+G +WE +R R    PI  +I+S  D+SNFDE+P
Sbjct: 295 FFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFP 328

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 35.2 bits (81), Expect = 0.003
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD-----EYP---PDQAIFLSFPCRWFDG 52
           +F   NW+ L  R + PP  P ++S+ D S FD     + P   PD +       + F G
Sbjct: 258 FFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDDSTLSESANQIFLG 317

Query: 53  FNW 55
           F +
Sbjct: 318 FTY 320

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 35.1 bits (81), Expect = 0.003
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD 88
           +F   +W  LR   L PP +P++ S+ D+  FD++  + D
Sbjct: 259 FFKEVDWNELR--ELKPPFVPELESEIDTGYFDDFENEDD 296

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWD 99
           +F+G +W  +R R    PI  +I+S  D+SNFDE+P      PA++    D
Sbjct: 295 FFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESDILQPAENTIEPD 343

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +W+ L NR + PP  PK+  +  + NFD++         PPDQ +  +     F+
Sbjct: 259 FFRRIDWDKLENREIQPPFKPKVCGKG-AENFDKFFTRGQPVLTPPDQLVIANIDQADFE 317

Query: 52  GFNW 55
           GF++
Sbjct: 318 GFSY 321

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 35.0 bits (80), Expect = 0.003
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)

Query: 3   DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           D +NW+ +R      P++P++ S  DSSNFD+   D+    +FP
Sbjct: 310 DQWNWDNIRET--AAPVVPELSSDIDSSNFDDIEDDKGDVETFP 351

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP 36
           +F+G +W  +R R    PI  +I+S  D+SNFDE+P
Sbjct: 295 FFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFP 328

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 34.4 bits (79), Expect = 0.004
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDAD 101
           +F G ++  L  R   P I PKI   TD+SNFD   P++      D +G  + 
Sbjct: 303 FFKGIDFASLIRRQKAPYI-PKITHPTDTSNFDPVDPEK---LRSDDSGESSP 351

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
KOG0614|consensus	732		99.73
KOG0695|consensus	593		99.24
KOG0694|consensus	694		99.17
KOG0605|consensus	550		99.17
KOG0690|consensus	516		98.96
KOG0696|consensus	683		98.92
KOG0616|consensus	355		98.8
KOG0608|consensus	1034		98.77
smart00133	64	S_TK_X Extension to Ser/Thr-type protein kinases.	98.76
KOG0694|consensus	694		98.67
KOG0598|consensus	357		98.62
smart00133	64	S_TK_X Extension to Ser/Thr-type protein kinases.	98.56
KOG0616|consensus	355		98.44
KOG0612|consensus	1317		98.42
KOG0690|consensus	516		98.34
KOG0614|consensus	732		98.13
KOG0598|consensus	357		98.08
KOG0605|consensus	550		98.02
KOG0696|consensus	683		97.89
KOG0986|consensus	591		97.67
KOG0695|consensus	593		97.65
KOG0612|consensus	1317		97.64
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	97.49
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	97.47
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	97.1
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	97.06
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	97.05
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	96.94
KOG0608|consensus	1034		96.92
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	96.84
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	96.82
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	96.77
KOG0603|consensus	612		96.76
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	96.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	96.64
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	96.63
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	96.63
KOG0610|consensus	459		96.46
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	96.29
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	96.22
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	96.22
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	96.2
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	96.14
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	96.08
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	95.99
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	95.96
KOG0603|consensus	612		95.77
PTZ00263	329	protein kinase A catalytic subunit; Provisional	95.76
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	95.57
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	95.56
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	95.54
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	95.45
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	95.42
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	95.3
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	95.24
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	95.05
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	94.99
KOG0606|consensus	1205		94.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	94.81
KOG0986|consensus	591		94.76
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	94.62
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	94.61
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	94.46
KOG0592|consensus	604		94.41
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	94.08
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	93.88
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	93.72
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	93.69
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	93.66
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	93.64
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	93.63
KOG0606|consensus	1205		93.61
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	93.4
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	93.23
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	93.23
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	93.14
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	93.09
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	93.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	92.9
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	92.77
KOG0610|consensus	459		92.58
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	92.57
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	92.47
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	92.37
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	92.28
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	92.12
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	92.04
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	92.04
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	91.98
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	91.71
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	91.59
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	91.58
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	91.3
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	91.21
PTZ00263	329	protein kinase A catalytic subunit; Provisional	90.78
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	90.5
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	90.44
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	90.33
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	89.83
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	89.53
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	89.27
PF00433	48	Pkinase_C: Protein kinase C terminal domain; Inter	88.8
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	88.64
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	88.35
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	87.5
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	87.46
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	87.46
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	87.29
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	87.2
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	87.12
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	86.76
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	86.29
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	85.86
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	85.04
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	84.84
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	84.41
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	84.39
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	83.63
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	83.42
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	81.54
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	81.39
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	80.92
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	80.42
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	80.39

>KOG0614|consensus

Probab=99.73  E-value=1.7e-18  Score=125.69  Aligned_cols=65  Identities=57%  Similarity=1.177  Sum_probs=63.0

Q ss_pred             cchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy17573         38 DQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF  102 (102)
Q Consensus        38 ~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~~~~~~~~~~~~~~~  102 (102)
                      .+|+.+|++|.||.+|||+.|+.+.++||++|.++++.|++|||.|+.+.+.++|+|.||||+||
T Consensus       668 ~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p~dnd~pppde~SGWD~dF  732 (732)
T KOG0614|consen  668 KGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPDNDEPPPDELSGWDKDF  732 (732)
T ss_pred             cCChHHHHhhhhhhcCChhhhhhccCCCCccccCCCcccchhccCCCcccCCCCchhcccCCCCC
Confidence            47789999999999999999999999999999999999999999999999999999999999998

>KOG0695|consensus

Probab=99.24  E-value=5.4e-12  Score=88.96  Aligned_cols=89  Identities=17%  Similarity=0.360  Sum_probs=75.2

Q ss_pred             hHHHhcCcCCCCccCcccCCCCCCCCCC--------CCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCC
Q psy17573          7 WEGLRNRTLIPPILPKIRSQTDSSNFDE--------YPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSS   78 (102)
Q Consensus         7 W~~l~~k~i~pP~~P~~~~~~d~~~fd~--------~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~   78 (102)
                      ++.||.|+|.-|-.-.++.....+.|..        .....|..+++.|+||+.++|+.|.++.+-|||.|.+.+..+..
T Consensus       468 fqvilekqiriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~  547 (593)
T KOG0695|consen  468 FQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLD  547 (593)
T ss_pred             HHHHhhhcccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCcc
Confidence            5788999998887777766665566631        12235778999999999999999999999999999999999999


Q ss_pred             CCCC-CCCCCCCCCCCCC
Q psy17573         79 NFDE-YPPDQDPPPADDL   95 (102)
Q Consensus        79 ~fd~-~~~~~~~~~~~~~   95 (102)
                      |||. |+++..+++||+.
T Consensus       548 ~fd~qft~e~~qltpdd~  565 (593)
T KOG0695|consen  548 NFDTQFTSEPVQLTPDDE  565 (593)
T ss_pred             ccccccccCCcccCCCCH
Confidence            9998 9999999999974

>KOG0694|consensus

Probab=99.17  E-value=1.6e-11  Score=91.62  Aligned_cols=57  Identities=28%  Similarity=0.552  Sum_probs=52.6

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADDL   95 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~~   95 (102)
                      .++.+|+.|+||+.++|++|.+|+++|||+|.+++..|.+|||. |+.+...+||.+.
T Consensus       616 ~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~eFt~e~p~Lt~~~~  673 (694)
T KOG0694|consen  616 RDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDEEFTSEKPALTPSDP  673 (694)
T ss_pred             CCchhhhhCCccccCCHHHHhhccCCCCCCcccCChhhhcccchhhhcCCCccCCCCc
Confidence            45678999999999999999999999999999999999999998 9999999997554

>KOG0605|consensus

Probab=99.17  E-value=6.7e-12  Score=91.60  Aligned_cols=91  Identities=19%  Similarity=0.397  Sum_probs=65.5

Q ss_pred             CChHHHhcCcCCCCccCcccCCCC--CCCCCCCCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573          5 FNWEGLRNRTLIPPILPKIRSQTD--SSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus         5 idW~~l~~k~i~pP~~P~~~~~~d--~~~fd~~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ++|...+......+..+...+..+  ..+......++|+.+|+.|+||++++|+.|+...  |||+|.+.+..|+.|||+
T Consensus       401 ~nwr~~l~fP~~~~~s~eA~DLI~rll~d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~--apfvP~v~~~~DT~yFdd  478 (550)
T KOG0605|consen  401 VNWRETLKFPEEVDLSDEAKDLITRLLCDPENRLGSKGAEEIKKHPFFKGVDWDHLREMP--APFVPQVNSELDTQYFDD  478 (550)
T ss_pred             HHHhhhccCCCcCcccHHHHHHHHHHhcCHHHhcCcccHHHHhcCCccccCCcchhhcCC--CCCCCCCCCccccccccc
Confidence            566666655444444444333222  1222234447899999999999999999998664  999999999999999999


Q ss_pred             CCCCCCCCCCCCCCC
Q psy17573         83 YPPDQDPPPADDLTG   97 (102)
Q Consensus        83 ~~~~~~~~~~~~~~~   97 (102)
                      |.+++...+..+.+|
T Consensus       479 F~e~~~~~~~~~~~~  493 (550)
T KOG0605|consen  479 FPEEDSMTPTADKSG  493 (550)
T ss_pred             CcccccCcccccccc
Confidence            999888766655544

>KOG0690|consensus

Probab=98.96  E-value=2.4e-10  Score=80.38  Aligned_cols=59  Identities=25%  Similarity=0.497  Sum_probs=53.8

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADDLTG   97 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~~~~   97 (102)
                      ..+.+|+.|.||.+++|+.+.++++.|||+|++.+..|+++||+ |+.....+||-+-+|
T Consensus       416 dDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT~q~v~lTPP~r~~  475 (516)
T KOG0690|consen  416 DDAKEIMRHRFFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFTSQPVTLTPPDRYG  475 (516)
T ss_pred             hhHHHHHhhhhhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhhcceeEecCCCCCC
Confidence            44578999999999999999999999999999999999999998 999988888877655

>KOG0696|consensus

Probab=98.92  E-value=5.1e-10  Score=80.80  Aligned_cols=55  Identities=27%  Similarity=0.508  Sum_probs=50.0

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      +..+|+.|+||+.++|+++.+++|+|||+|+++...+.+|||+ |+.+...+||.|
T Consensus       599 ge~di~~H~FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~Ft~~~~~lTPpD  654 (683)
T KOG0696|consen  599 GERDIREHPFFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFFTREPTDLTPPD  654 (683)
T ss_pred             cccchhhCcchhhccHHHHhhccCCCCCCCccccCCchhhhhHHHhcCCCCCCCch
Confidence            4467999999999999999999999999999999999999999 888887788765

>KOG0616|consensus

Probab=98.80  E-value=4.1e-09  Score=73.02  Aligned_cols=49  Identities=33%  Similarity=0.720  Sum_probs=45.6

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeec-cCCCCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILP-KIRSQTDSSNFDEYPPDQ   87 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p-~~~~~~d~~~fd~~~~~~   87 (102)
                      +|..+|+.|+||++++|.++.+|+|+|||.| ++....|++||+.+..++
T Consensus       289 nG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~~  338 (355)
T KOG0616|consen  289 NGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEED  338 (355)
T ss_pred             CCccccccCcccccccHHHHhhccccCCCCCccccCCccccccccccccc
Confidence            5788999999999999999999999999988 999999999999977766

>KOG0608|consensus

Probab=98.77  E-value=2.9e-09  Score=80.18  Aligned_cols=90  Identities=19%  Similarity=0.301  Sum_probs=59.6

Q ss_pred             CCCChHHHhcCcCCCCccCcccCCCC--CCCCCCCCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCC
Q psy17573          3 DGFNWEGLRNRTLIPPILPKIRSQTD--SSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF   80 (102)
Q Consensus         3 ~~idW~~l~~k~i~pP~~P~~~~~~d--~~~fd~~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~f   80 (102)
                      +.+||...|+-....-..+......-  ++.=+..+...+..+++.|+||++|||..|+.+  .+||+|.++...|+|||
T Consensus       882 kv~nw~~~l~~~~~~~ls~e~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfsslRkq--~ApYIP~ItHptDTSNF  959 (1034)
T KOG0608|consen  882 KVINWRNFLHIPYQGNLSKEALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFSSLRKQ--RAPYIPRITHPTDTSNF  959 (1034)
T ss_pred             eeeehhhccccccccccCHHHHHHHHHHhcChhhhhcccchhhhhcCccccccchHhhhhc--cCCcCccccCCCccccC
Confidence            46788887754322222222211110  111123455677788999999999999997655  58899999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q psy17573         81 DEYPPDQDPPPADD   94 (102)
Q Consensus        81 d~~~~~~~~~~~~~   94 (102)
                      |.+..+..+.-..+
T Consensus       960 dpvdpeklwnddse  973 (1034)
T KOG0608|consen  960 DPVDPEKLWNDDSE  973 (1034)
T ss_pred             CcCCcccccccccc
Confidence            98777665544433

>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases

Probab=98.76  E-value=8.8e-09  Score=55.89  Aligned_cols=32  Identities=50%  Similarity=1.070  Sum_probs=30.0

Q ss_pred             CCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          3 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         3 ~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ++|||++|++|+++|||+|.+.+..++++|+.
T Consensus         1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~   32 (64)
T smart00133        1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDD   32 (64)
T ss_pred             CCCCHHHHHhCCCCCCcccccCCccHHhHcCC
Confidence            58999999999999999999999999999985

>KOG0694|consensus

Probab=98.67  E-value=8.7e-09  Score=77.36  Aligned_cols=34  Identities=44%  Similarity=0.972  Sum_probs=33.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+.|||++|++|+++|||+|.+++..|.+|||.
T Consensus       626 FFr~i~w~~L~~r~i~PPf~P~i~~~~D~snFd~  659 (694)
T KOG0694|consen  626 FFRSIDWDDLLNRRIKPPFVPTIKGPEDVSNFDE  659 (694)
T ss_pred             ccccCCHHHHhhccCCCCCCcccCChhhhcccch
Confidence            8999999999999999999999999999999995

>KOG0598|consensus

Probab=98.62  E-value=3.4e-08  Score=69.64  Aligned_cols=50  Identities=30%  Similarity=0.521  Sum_probs=44.6

Q ss_pred             CcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCC
Q psy17573         37 PDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPD   86 (102)
Q Consensus        37 ~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~   86 (102)
                      ...++.+|+.|++|.+++|+.|..++++|||+|.+.+..+++|||. |+..
T Consensus       271 ~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~~~~~~Fd~eft~~  321 (357)
T KOG0598|consen  271 GPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGLEDTSNFDNEFTSY  321 (357)
T ss_pred             CCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCccccccccHHHHhc
Confidence            3456778999999999999999999999999999999999999997 4443

>smart00133 S_TK_X Extension to Ser/Thr-type protein kinases

Probab=98.56  E-value=8.6e-08  Score=51.92  Aligned_cols=39  Identities=41%  Similarity=0.920  Sum_probs=34.0

Q ss_pred             CCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCC
Q psy17573         51 DGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDP   89 (102)
Q Consensus        51 ~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~   89 (102)
                      ++++|+.|.+|+++|||+|.+.+..+++||+. ++.....
T Consensus         1 ~~idW~~l~~r~~~pP~~P~~~~~~d~s~fd~~~~~~~~~   40 (64)
T smart00133        1 RGIDWDKLENKEIEPPFVPKIKSPTDTSNFDDEFTEETPV   40 (64)
T ss_pred             CCCCHHHHHhCCCCCCcccccCCccHHhHcCCcCCCCCCC
Confidence            47999999999999999999999999999997 6665433

>KOG0616|consensus

Probab=98.44  E-value=8.6e-08  Score=66.58  Aligned_cols=39  Identities=41%  Similarity=1.004  Sum_probs=36.6

Q ss_pred             CCCCCChHHHhcCcCCCCccC-cccCCCCCCCCCCCCCcc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILP-KIRSQTDSSNFDEYPPDQ   39 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P-~~~~~~d~~~fd~~~~~~   39 (102)
                      ||++++|.+|++|++++||+| .+..+.|+++|+.+.+..
T Consensus       299 wF~~v~W~~i~~r~ie~P~~pp~~~~~gdtsnfd~y~e~~  338 (355)
T KOG0616|consen  299 WFKGVDWEAILQRKIEPPFEPPNIHGPGDTSNFDDYEEED  338 (355)
T ss_pred             ccccccHHHHhhccccCCCCCccccCCccccccccccccc
Confidence            899999999999999999999 889999999999888765

>KOG0612|consensus

Probab=98.42  E-value=2.4e-07  Score=73.17  Aligned_cols=46  Identities=30%  Similarity=0.651  Sum_probs=40.4

Q ss_pred             CCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         35 YPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        35 ~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ....+|+.+++.|+||.|++|+.|+.  ..|||+|.+.+..|++|||.
T Consensus       326 RLgrngiedik~HpFF~g~~W~~iR~--~~pP~vPevssd~DTsnFd~  371 (1317)
T KOG0612|consen  326 RLGRNGIEDIKNHPFFEGIDWDNIRE--SVPPVVPEVSSDDDTSNFDV  371 (1317)
T ss_pred             hcccccHHHHHhCccccCCChhhhhh--cCCCCCCcCCCCCccccccc
Confidence            34567899999999999999999864  46999999999999999964

>KOG0690|consensus

Probab=98.34  E-value=1.9e-07  Score=66.12  Aligned_cols=37  Identities=32%  Similarity=0.697  Sum_probs=34.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP   37 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~   37 (102)
                      ||++|||..++.|+|.|||.|.+.+..|+++||+...
T Consensus       426 FF~~v~W~~~~~Kki~PPfKPqVtSetDTryFD~EFT  462 (516)
T KOG0690|consen  426 FFASVDWEATYRKKIEPPFKPQVTSETDTRYFDEEFT  462 (516)
T ss_pred             hhccCCHHHHHHhccCCCCCCCcccccchhhhhhhhh
Confidence            7999999999999999999999999999999996443

>KOG0614|consensus

Probab=98.13  E-value=2.2e-06  Score=63.57  Aligned_cols=42  Identities=60%  Similarity=1.259  Sum_probs=38.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCcchhh
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIF   42 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~~~~~   42 (102)
                      ||.++||..+..+.+.||++|.++++.|++|||.++..++..
T Consensus       679 Wf~gfdweglr~~~L~pPi~~~va~ptD~s~Fd~~p~dnd~p  720 (732)
T KOG0614|consen  679 WFEGFDWEGLRSRTLPPPIIPSVANPTDVSNFDNFPPDNDEP  720 (732)
T ss_pred             hhhcCChhhhhhccCCCCccccCCCcccchhccCCCcccCCC
Confidence            899999999999999999999999999999999988776543

>KOG0598|consensus

Probab=98.08  E-value=2.5e-06  Score=60.33  Aligned_cols=36  Identities=42%  Similarity=0.816  Sum_probs=33.7

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++|||++++.|++.|||+|.+.+..++++|+...
T Consensus       283 fF~~inW~~l~~k~l~PpF~P~~~~~~~~~~Fd~ef  318 (357)
T KOG0598|consen  283 FFKGINWEKLLAKKLSPPFKPNVTGLEDTSNFDNEF  318 (357)
T ss_pred             ccccCCHHHHHhcCCCCCeecCCCCccccccccHHH
Confidence            799999999999999999999999999999999543

>KOG0605|consensus

Probab=98.02  E-value=3.3e-06  Score=62.33  Aligned_cols=36  Identities=33%  Similarity=0.959  Sum_probs=32.7

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++|||+.|....  |||+|.+.+..|++||+++.+.
T Consensus       447 fF~~v~W~~l~~~~--apfvP~v~~~~DT~yFddF~e~  482 (550)
T KOG0605|consen  447 FFKGVDWDHLREMP--APFVPQVNSELDTQYFDDFPEE  482 (550)
T ss_pred             ccccCCcchhhcCC--CCCCCCCCCcccccccccCccc
Confidence            89999999998665  9999999999999999987764

>KOG0696|consensus

Probab=97.89  E-value=6.4e-06  Score=60.08  Aligned_cols=36  Identities=39%  Similarity=0.869  Sum_probs=33.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||+.|||.++.+++|+|||.|.++-..+..|||++.
T Consensus       608 FFR~iDWek~E~~eiqPPfkPk~k~~r~~eNFD~~F  643 (683)
T KOG0696|consen  608 FFRRIDWEKLERREIQPPFKPKIKCGRDAENFDKFF  643 (683)
T ss_pred             chhhccHHHHhhccCCCCCCCccccCCchhhhhHHH
Confidence            799999999999999999999999888999999643

>KOG0986|consensus

Probab=97.67  E-value=2.4e-05  Score=57.44  Aligned_cols=44  Identities=23%  Similarity=0.446  Sum_probs=39.3

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeec-----cCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILP-----KIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p-----~~~~~~d~~~fd~   82 (102)
                      .|+.+++.|++|+.+||.+|..+.++|||+|     .+++..|..+|+.
T Consensus       438 ~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DIeqFs~  486 (591)
T KOG0986|consen  438 EGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDIEQFST  486 (591)
T ss_pred             cCcchhhhCcccccCCHhHHhccCCCCCCCCCccccchhhhhhhhhccc
Confidence            4667899999999999999999999999998     5678888888886

>KOG0695|consensus

Probab=97.65  E-value=3.2e-05  Score=55.28  Aligned_cols=34  Identities=29%  Similarity=0.781  Sum_probs=32.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+.|||+.|..|++-|||.|.+.+..+..|||.
T Consensus       518 ffr~idwd~leqk~v~ppf~p~i~~d~~l~~fd~  551 (593)
T KOG0695|consen  518 FFRSIDWDLLEQKQVLPPFQPQITDDYGLDNFDT  551 (593)
T ss_pred             hhhhCCHHHHhhcccCCCCCCccccccCcccccc
Confidence            7999999999999999999999999999999983

>KOG0612|consensus

Probab=97.64  E-value=5.1e-05  Score=60.58  Aligned_cols=32  Identities=41%  Similarity=1.100  Sum_probs=29.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||.|++|+.|.  ...|||+|.++++.||+||+.
T Consensus       340 FF~g~~W~~iR--~~~pP~vPevssd~DTsnFd~  371 (1317)
T KOG0612|consen  340 FFEGIDWDNIR--ESVPPVVPEVSSDDDTSNFDV  371 (1317)
T ss_pred             cccCCChhhhh--hcCCCCCCcCCCCCccccccc
Confidence            89999998885  667999999999999999964

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=97.49  E-value=0.00014  Score=50.54  Aligned_cols=53  Identities=28%  Similarity=0.521  Sum_probs=43.5

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPAD   93 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~   93 (102)
                      ..++..|+||.+++|..+..+.+.||+.|.+.+..+.+||+. +..++....|.
T Consensus       247 ~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (320)
T cd05590         247 EEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDPDFIKEDPVLTPI  300 (320)
T ss_pred             HHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCccCCCC
Confidence            367889999999999999999999999999999999999986 55544333333

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=97.47  E-value=0.00018  Score=50.06  Aligned_cols=53  Identities=19%  Similarity=0.424  Sum_probs=42.8

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPA   92 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~   92 (102)
                      +..++..|+||.+++|+.+..+.+.+||.|.+....+.++|+. +..+..+.+|
T Consensus       253 ~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (327)
T cd05617         253 GFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDDYGLENFDTQFTSEPVQLTP  306 (327)
T ss_pred             CHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCCcchhhcCCccccCcccCCC
Confidence            4568999999999999999999999999999988888899975 4444333333

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=97.10  E-value=0.00087  Score=46.75  Aligned_cols=55  Identities=20%  Similarity=0.458  Sum_probs=43.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      +..++..|+||++++|..+.++++.||+.|.+....+..+|+. +..+...++|++
T Consensus       255 ~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (329)
T cd05618         255 GFADIQGHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPVQLTPDD  310 (329)
T ss_pred             CHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCCCcccchhcCcccccCCccCCCCc
Confidence            3568899999999999999999999999999887777777775 444444444443

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=97.06  E-value=0.00086  Score=46.49  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=37.4

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP   85 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~   85 (102)
                      ..+++.|+||+.++|..+.++.+++|+.|.... .+..+++.+..
T Consensus       251 ~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  294 (323)
T cd05616         251 ERDIKEHAFFRYIDWEKLERKEVQPPYKPKACG-RDAENFDKFFT  294 (323)
T ss_pred             HHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCC-chhhhcCchhc
Confidence            467899999999999999999999999998654 78888887444

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=97.05  E-value=0.00088  Score=46.66  Aligned_cols=56  Identities=25%  Similarity=0.486  Sum_probs=46.8

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADDL   95 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~~   95 (102)
                      ++.++..|+||..++|..+.++.+.||+.|.+....+..+|+. +..+....+|.+.
T Consensus       255 ~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  311 (329)
T cd05588         255 GFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDP  311 (329)
T ss_pred             CHHHHhcCCCCCCCCHHHHHhCCCCCCccccCCCcchhhhcCCccccCccccCCCCc
Confidence            3568999999999999999988899999999988888899986 6666666666543

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=96.94  E-value=0.0013  Score=45.69  Aligned_cols=53  Identities=23%  Similarity=0.453  Sum_probs=42.8

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCC-CCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP-DQDPPPAD   93 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~-~~~~~~~~   93 (102)
                      ..+++.|+||+.++|..+..+.+.+|+.|.+....+.++|+.+.. .....+|.
T Consensus       251 ~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (324)
T cd05587         251 ERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFFTREPPVLTPP  304 (324)
T ss_pred             HHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcchhhhcCcccccCccccCCC
Confidence            357899999999999999999999999999998899999998333 33334444

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0608|consensus

Probab=96.92  E-value=0.00068  Score=52.11  Aligned_cols=32  Identities=41%  Similarity=0.828  Sum_probs=28.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++|||..|  |+..+||||.+..+.|++|||-
T Consensus       930 fFkgIDfssl--Rkq~ApYIP~ItHptDTSNFdp  961 (1034)
T KOG0608|consen  930 FFKGIDFSSL--RKQRAPYIPRITHPTDTSNFDP  961 (1034)
T ss_pred             cccccchHhh--hhccCCcCccccCCCccccCCc
Confidence            8999999995  3556899999999999999984

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=96.84  E-value=0.0017  Score=44.96  Aligned_cols=54  Identities=24%  Similarity=0.461  Sum_probs=44.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPAD   93 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~   93 (102)
                      .+.++..|+||.+++|..+..+.+.+|+.|......+.++|+. +.......+|.
T Consensus       247 ~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (321)
T cd05591         247 GEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFDQDFTKEEPVLTPV  301 (321)
T ss_pred             CHHHHhcCCccCCCCHHHHHhCCCCCCCCCCCCCcchhhhcCCccccCccccCCC
Confidence            4567899999999999999999999999999888888888886 55554444443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=96.82  E-value=0.0016  Score=45.13  Aligned_cols=53  Identities=26%  Similarity=0.534  Sum_probs=46.1

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      .++..|+||..++|..+..+.+.||+.|.+....+.++|+. +..+...++|.+
T Consensus       247 ~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (318)
T cd05570         247 QDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDDEFTKEKPVLTPPD  300 (318)
T ss_pred             HHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCchhccCcccCCCCc
Confidence            77899999999999999999999999999999999999986 666666666655

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=96.77  E-value=0.002  Score=44.74  Aligned_cols=53  Identities=26%  Similarity=0.533  Sum_probs=43.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPA   92 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~   92 (102)
                      .+.++..|+||.+++|..+..+.+.||+.|.+....++.+|++ ++......+|
T Consensus       244 ~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  297 (323)
T cd05571         244 DAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEEFTAQSITITP  297 (323)
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCCcccCC
Confidence            4678999999999999999999999999999999899999986 5555443333

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0603|consensus

Probab=96.76  E-value=0.0012  Score=50.00  Aligned_cols=44  Identities=23%  Similarity=0.471  Sum_probs=41.7

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .+..+++.|.+|..++|.++..|++.|||+|.+....++.+||.
T Consensus       235 ~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~  278 (612)
T KOG0603|consen  235 DGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDP  278 (612)
T ss_pred             chhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCc
Confidence            56788999999999999999999999999999999999999997

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=96.74  E-value=0.0022  Score=44.46  Aligned_cols=54  Identities=31%  Similarity=0.564  Sum_probs=45.9

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCCC
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADDL   95 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~~   95 (102)
                      ..+..|+||..++|..+..+.+.||+.|..+...+.++|+. ++......+|.+.
T Consensus       243 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (316)
T cd05592         243 GDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREFTNEKVRLSPVDK  297 (316)
T ss_pred             HHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccccccCCCccc
Confidence            46788999999999999999999999999999999999987 6666666666654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=96.64  E-value=0.0036  Score=44.03  Aligned_cols=48  Identities=27%  Similarity=0.468  Sum_probs=41.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ   87 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~   87 (102)
                      ++.+++.|+||.+++|..+..+.+.+|+.|......+.++|.....+.
T Consensus       277 ~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  324 (340)
T PTZ00426        277 GAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERVQEDL  324 (340)
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCCcccc
Confidence            567899999999999999999999999999999988999987744443

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=96.63  E-value=0.0024  Score=43.56  Aligned_cols=44  Identities=39%  Similarity=0.816  Sum_probs=40.5

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   83 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~   83 (102)
                      .+.++..|+||..++|..+..+.+.||..|.+....++.||+++
T Consensus       247 ~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  290 (291)
T cd05612         247 GADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDY  290 (291)
T ss_pred             CHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCccccccccCC
Confidence            46789999999999999999999999999999999999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=96.63  E-value=0.0041  Score=43.87  Aligned_cols=48  Identities=35%  Similarity=0.647  Sum_probs=38.4

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD   88 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~   88 (102)
                      .++.+++.|+||++++|..+..+...+|+  ......++++|+.+...+.
T Consensus       285 ~~~~ei~~hp~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  332 (363)
T cd05628         285 PGVEEIKTNPFFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFPDSDI  332 (363)
T ss_pred             CCHHHHhCCCCCCCCCHHHHHhCCCCCCc--cCCCcchhhccCCCCcccc
Confidence            35688999999999999999887666554  4567889999998776654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0610|consensus

Probab=96.46  E-value=0.0013  Score=47.89  Aligned_cols=65  Identities=22%  Similarity=0.342  Sum_probs=40.5

Q ss_pred             HHHhcCcCCCCccCcccCCC-C------CCCCC-CCCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCC
Q psy17573          8 EGLRNRTLIPPILPKIRSQT-D------SSNFD-EYPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQ   74 (102)
Q Consensus         8 ~~l~~k~i~pP~~P~~~~~~-d------~~~fd-~~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~   74 (102)
                      ..|+.+.++-|-.|.+.... |      .+.-. ++.-..|+.+|+.|+||++++|.-+  |..+||++|.....
T Consensus       345 ~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi--r~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  345 RNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI--RCARPPEIPKPVDG  417 (459)
T ss_pred             HHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe--eccCCCcCCCcccc
Confidence            44555666666666432211 1      01111 2334567899999999999999844  46679999975444

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=96.29  E-value=0.0052  Score=43.59  Aligned_cols=60  Identities=28%  Similarity=0.411  Sum_probs=44.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD-------PPPADDLTGWDA  100 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~-------~~~~~~~~~~~~  100 (102)
                      ++.+++.|+||.+++|..... +..+|+.|.+....++++|+.+.....       ...++...||-+
T Consensus       298 ~~~ei~~hp~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (382)
T cd05625         298 GADEIKAHPFFKTIDFSSDLR-QQSAPYIPKITHPTDTSNFDPVDPDKLWSDDDKEGNVNDTLNGWYK  364 (382)
T ss_pred             CHHHHhcCCCcCCcChHHHHh-cCCCCccCcCCCcchhhhcCCCCccccccccccccccccccccccc
Confidence            467899999999999997654 467899999999999999987433322       233555667754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=96.22  E-value=0.011  Score=41.09  Aligned_cols=43  Identities=26%  Similarity=0.602  Sum_probs=38.8

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ...++..|+||.+++|..+..+.+.+|+.|.+....+.++|+.
T Consensus       244 ~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05604         244 DFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA  286 (325)
T ss_pred             CHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCC
Confidence            4467899999999999999999999999999998889999986

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=96.22  E-value=0.0069  Score=42.00  Aligned_cols=48  Identities=31%  Similarity=0.609  Sum_probs=41.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQ   87 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~   87 (102)
                      .+.++..|+||++++|..+..+.+.+|+.|.+....|.++|.. +....
T Consensus       250 ~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  298 (324)
T cd05589         250 DAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPEDVSNFDEEFTSEA  298 (324)
T ss_pred             CHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcchhhhcCccccccc
Confidence            4678899999999999999999999999999988899999886 44443

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=96.20  E-value=0.0083  Score=42.25  Aligned_cols=46  Identities=35%  Similarity=0.679  Sum_probs=36.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ   87 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~   87 (102)
                      ++.+++.|+||.+++|..+.++...+|+  .+....+.++|+.+....
T Consensus       286 ~~~ei~~hp~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  331 (360)
T cd05627         286 GVEEIKSHPFFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESD  331 (360)
T ss_pred             CHHHHhcCCCCCCCCHHHHhcCCCCCCc--cCCCcchhhhcCCCCccc
Confidence            5678999999999999999888766664  456788999998755443

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=96.14  E-value=0.0095  Score=41.38  Aligned_cols=60  Identities=23%  Similarity=0.532  Sum_probs=48.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCC-CCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQD-PPPADDLTGWD   99 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~-~~~~~~~~~~~   99 (102)
                      .+.++..|+||.+++|..+..+.+.||+.|......+...|+. ++.... ..+|+..++++
T Consensus       244 ~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (323)
T cd05595         244 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDRYDSLG  305 (323)
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcccccCCccCCCCccccccc
Confidence            4567889999999999999999999999999999999999987 444433 35666666665

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=96.08  E-value=0.01  Score=41.24  Aligned_cols=43  Identities=28%  Similarity=0.546  Sum_probs=36.6

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   84 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~   84 (102)
                      ..+++.|+||..++|..+.++.+.+|+.|.... ...++|+.+.
T Consensus       251 ~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  293 (323)
T cd05615         251 ERDIREHAFFRRIDWDKLENREIQPPFKPKVCG-KGAENFDKFF  293 (323)
T ss_pred             HHHHhcCcccCCCCHHHHhcCCCCcCccCccCC-CchhhcCccc
Confidence            457899999999999999999999999998655 4588888843

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=95.99  E-value=0.0077  Score=41.77  Aligned_cols=45  Identities=31%  Similarity=0.612  Sum_probs=40.0

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCC
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPD   86 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~   86 (102)
                      .+++.|+||..++|..+..+.+.+|+.|..+...+.++|++ +...
T Consensus       243 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (316)
T cd05619         243 GDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNE  288 (316)
T ss_pred             HHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcChhhhcC
Confidence            36889999999999999999999999999999999999987 4444

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=95.96  E-value=0.0067  Score=41.20  Aligned_cols=44  Identities=34%  Similarity=0.759  Sum_probs=39.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   83 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~   83 (102)
                      .+.++..|+||+.++|..+.+..+.+|+.|......+.+.|++|
T Consensus       247 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05580         247 GVNDIKNHPWFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY  290 (290)
T ss_pred             CHHHHHcCcccccCCHHHHhhccCCCCccCCCCCccccccccCC
Confidence            56788999999999999999999999999999989999999864

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0603|consensus

Probab=95.77  E-value=0.0071  Score=45.94  Aligned_cols=57  Identities=21%  Similarity=0.370  Sum_probs=44.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc-------chhhcccCCCCCCCCChHH
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD-------QAIFLSFPCRWFDGFNWEG   57 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~-------~~~~~i~~~~~F~~~dw~~   57 (102)
                      ||.+|+|+++..|+++|||+|.+....++.+|+.....       ........|..|+++.+..
T Consensus       245 f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~~~s~~~if~g~sfva  308 (612)
T KOG0603|consen  245 FFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLLSASGSDHTIFSGPSFVA  308 (612)
T ss_pred             hheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCCcccCCCCCCCccccchhcCCCccC
Confidence            68999999999999999999999999999999853221       2223455567777777764

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=95.76  E-value=0.016  Score=40.37  Aligned_cols=47  Identities=32%  Similarity=0.588  Sum_probs=40.6

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   86 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~   86 (102)
                      .+.++..|+||.+.+|..+..+.+.+|+.+......+..+|..++..
T Consensus       264 ~~~~ll~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  310 (329)
T PTZ00263        264 GVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPDS  310 (329)
T ss_pred             CHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcccchhccCCccc
Confidence            35789999999999999999999999998888888899999875544

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=95.57  E-value=0.018  Score=40.42  Aligned_cols=47  Identities=32%  Similarity=0.613  Sum_probs=38.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQD   88 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~   88 (102)
                      .+.++..|+||.+++|..+..  ..+|+.|......+.++|+.+.....
T Consensus       289 ~~~~ll~h~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (364)
T cd05599         289 GVNEIKSHPFFKGVDWEHIRE--RPAPIIPELKSITDTSNFDDFEEIDL  335 (364)
T ss_pred             CHHHHhcCCCcCCCCHHHHhh--cCCCCCCCCCCchhhhhccccccccc
Confidence            478899999999999998764  46889999999899999988555543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=95.56  E-value=0.02  Score=39.90  Aligned_cols=47  Identities=30%  Similarity=0.697  Sum_probs=40.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPD   86 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~   86 (102)
                      .+.++..|+||.+.+|..+..+.+.+|+.|.+....+...|+. +..+
T Consensus       244 ~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (328)
T cd05593         244 DAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEEFTAQ  291 (328)
T ss_pred             CHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCcccccC
Confidence            5678999999999999999999999999999998889988886 4433

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=95.54  E-value=0.018  Score=40.91  Aligned_cols=47  Identities=23%  Similarity=0.289  Sum_probs=38.5

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   86 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~   86 (102)
                      .++.+++.|+||.+++|..... ...+|+.|.+....++++|+....+
T Consensus       297 ~~~~~~l~hp~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~  343 (381)
T cd05626         297 NGADDIKAHPFFSEVDFSSDIR-TQPAPYVPKISHPMDTSNFDPVEEE  343 (381)
T ss_pred             CCHHHHhcCcccCCCChhHHhh-cCCCCccCcCCCcchhhhcCCCCcc
Confidence            4667899999999999998654 5578999999999999999874433

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=95.45  E-value=0.028  Score=38.93  Aligned_cols=43  Identities=26%  Similarity=0.573  Sum_probs=37.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ...++..|+||..++|..+.++++.+|+.|.+....+.++|+.
T Consensus       244 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T cd05575         244 DFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDP  286 (323)
T ss_pred             CHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCc
Confidence            3457889999999999999999999999999888888888875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=95.42  E-value=0.026  Score=38.94  Aligned_cols=43  Identities=30%  Similarity=0.533  Sum_probs=39.3

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ++.++..|+||...+|..+..+.+++++.|.+....++++|+.
T Consensus       240 ~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
T cd05585         240 GAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE  282 (312)
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCc
Confidence            4678899999999999999999999999999998899999986

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=95.30  E-value=0.0095  Score=40.48  Aligned_cols=31  Identities=23%  Similarity=0.312  Sum_probs=28.6

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      ++.++..|+||.+++|..+.++.++|||+|.
T Consensus       254 ~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05631         254 GAAGVKQHPIFKNINFKRLEANMLEPPFCPD  284 (285)
T ss_pred             CHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence            4678999999999999999999999999996

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=95.24  E-value=0.033  Score=39.16  Aligned_cols=38  Identities=34%  Similarity=0.718  Sum_probs=32.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++++|..++++++.+|++|......+.+++.++...
T Consensus       286 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  323 (340)
T PTZ00426        286 WFGNIDWVSLLHKNVEVPYKPKYKNVFDSSNFERVQED  323 (340)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCCcchhhcCCCccc
Confidence            89999999999999999999999888777777654443

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=95.05  E-value=0.036  Score=38.46  Aligned_cols=44  Identities=27%  Similarity=0.542  Sum_probs=38.8

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ..+.++..|+||..++|..+..+.+++|+.|......+.++|+.
T Consensus       245 ~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (330)
T cd05586         245 RDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDP  288 (330)
T ss_pred             CCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcCc
Confidence            35678899999999999999999999999999888888888875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=94.99  E-value=0.035  Score=38.45  Aligned_cols=41  Identities=39%  Similarity=0.630  Sum_probs=37.3

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .++..|+||.+++|..+..+.+.+|+.|......+.++|+.
T Consensus       243 ~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05620         243 GNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR  283 (316)
T ss_pred             HHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            46888999999999999999999999999999889999886

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0606|consensus

Probab=94.97  E-value=0.014  Score=46.99  Aligned_cols=42  Identities=21%  Similarity=0.472  Sum_probs=38.2

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .+..+++.|.+|..+||..|.+++  +.|+|......|+++|+.
T Consensus       307 ~ga~evk~h~ff~~LDw~~llRqk--aefvpql~~eddtsyfdT  348 (1205)
T KOG0606|consen  307 GGALEVKQHGFFQLLDWKSLLRQK--AEFVPQLESEDDTSYFDT  348 (1205)
T ss_pred             chhhhhhhccceeecccchhhhhh--ccccccccccccchhhcc
Confidence            467889999999999999998886  789999999999999986

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=94.81  E-value=0.043  Score=38.04  Aligned_cols=43  Identities=30%  Similarity=0.688  Sum_probs=38.2

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .+.++..|+||.++.|..+..+.+.+|+.|......+...|+.
T Consensus       245 ~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd05594         245 DAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDE  287 (325)
T ss_pred             CHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence            4577889999999999999999999999999888888888886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0986|consensus

Probab=94.76  E-value=0.021  Score=42.53  Aligned_cols=23  Identities=35%  Similarity=0.853  Sum_probs=21.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKI   23 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~   23 (102)
                      ||++|||..|.-..+.|||+|..
T Consensus       448 fFk~lnw~rleagml~PPfiPdp  470 (591)
T KOG0986|consen  448 FFKDLNWRRLEAGMLEPPFIPDP  470 (591)
T ss_pred             ccccCCHhHHhccCCCCCCCCCc
Confidence            79999999999999999999974

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=94.62  E-value=0.04  Score=37.56  Aligned_cols=36  Identities=47%  Similarity=1.165  Sum_probs=32.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||..++|..+..+++.||.+|.+....++.+|+.++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  291 (291)
T cd05612         256 WFKSVDWDDVPQRKLKPPIVPKVSHDGDTSNFDDYP  291 (291)
T ss_pred             cccCCCHHHHhcCCCCCCEeCCCCCccccccccCCC
Confidence            899999999999999999999999999999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=94.61  E-value=0.059  Score=37.36  Aligned_cols=36  Identities=33%  Similarity=0.848  Sum_probs=31.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++++|..+..+.+.+|+.|.+....+..+|+.+.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (324)
T cd05587         259 FFRRIDWEKLERREIQPPFKPKVKGRRSAENFDKFF  294 (324)
T ss_pred             CcCCCCHHHHHhCCCCCCccCcCCCcchhhhcCccc
Confidence            799999999999999999999987777778887543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=94.46  E-value=0.036  Score=38.46  Aligned_cols=34  Identities=44%  Similarity=0.941  Sum_probs=30.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||.+++|..+..+.+.||+.|.+....+.++|+.
T Consensus       255 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (320)
T cd05590         255 FFKELDWEKLNRRQIEPPFRPRIKSREDVSNFDP  288 (320)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            7999999999999999999999988888888873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG0592|consensus

Probab=94.41  E-value=0.006  Score=45.87  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=24.5

Q ss_pred             CcchhhcccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         37 PDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        37 ~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      ..-++.+|+.|+||++++|+.|.++. +|+..|
T Consensus       328 ~Rlt~~qIk~HpFF~~Vdw~nlw~~~-PP~l~p  359 (604)
T KOG0592|consen  328 DRLTSQQIKAHPFFEGVDWENLWQQT-PPKLQP  359 (604)
T ss_pred             ccccHHHHhhCcccccCChhhhhhcC-CCcccC
Confidence            34566889999999999999988775 343444

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=94.08  E-value=0.065  Score=37.31  Aligned_cols=45  Identities=36%  Similarity=0.730  Sum_probs=38.0

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ   87 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~   87 (102)
                      +.++..|+||.+++|+.+.  ...+|+.|.+....+.++|+....+.
T Consensus       279 ~~~ll~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (350)
T cd05573         279 FEEIKSHPFFKGIDWENLR--ETKPPFVPELSSPLDTSNFDDFEDDK  323 (350)
T ss_pred             HHHHhcCCCcCCCCHHHHh--hCCCCcCCCCCCchhhhhcCCCCccc
Confidence            7789999999999999887  45688999999999999999855444

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=93.88  E-value=0.088  Score=37.25  Aligned_cols=44  Identities=32%  Similarity=0.463  Sum_probs=37.4

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   84 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~   84 (102)
                      .+.++..|+||.+++|..+. +...+|+.|.+....+.++|+...
T Consensus       294 t~~ell~h~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  337 (376)
T cd05598         294 GADEIKAHPFFKGIDFASLI-RRQKAPYIPKITHPTDTSNFDPVD  337 (376)
T ss_pred             CHHHHhCCCCcCCCCHHHHh-hcCCCCCCCcCCCcchhhhcCCCC
Confidence            67889999999999999887 556788999998888999988643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=93.72  E-value=0.14  Score=35.64  Aligned_cols=42  Identities=36%  Similarity=0.650  Sum_probs=34.1

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .++.++..|+||.+++|..+.+  ..+|+.|...+..+.++++.
T Consensus       258 ~~~~~~~~h~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  299 (332)
T cd05623         258 NGIEDFKQHPFFTGIDWDNIRN--CEAPYIPEVSSPTDTSNFDV  299 (332)
T ss_pred             CCHHHHhCCCCcCCCCHHHHhh--CCCCccCCCCCCcccccCCC
Confidence            3567899999999999999864  46788998888888887743

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=93.69  E-value=0.07  Score=37.12  Aligned_cols=33  Identities=30%  Similarity=0.765  Sum_probs=28.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|+.+..+++.+|+.|.+....+..+|+
T Consensus       262 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (327)
T cd05617         262 FFRSIDWDLLEKKQVTPPFKPQITDDYGLENFD  294 (327)
T ss_pred             CCCCCCHHHHHhCCCCCCccCCCCCCcchhhcC
Confidence            799999999999999999999987776666665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=93.66  E-value=0.14  Score=35.43  Aligned_cols=44  Identities=25%  Similarity=0.549  Sum_probs=37.7

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ....++..|.||..++|..+..+++.+|+.|.+....+..+|+.
T Consensus       243 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05602         243 DDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP  286 (325)
T ss_pred             CCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCC
Confidence            34457899999999999999999999999998888888887764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=93.64  E-value=0.11  Score=35.95  Aligned_cols=34  Identities=41%  Similarity=0.926  Sum_probs=31.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+.++|..+..+.+.+|+.|.+....+.++|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05619         250 FFREIDWSALEEREIEPPFKPKVKSANDCSNFDK  283 (316)
T ss_pred             ccCCCCHHHHHhCCCCCCcCCCCCCccchhhcCh
Confidence            7899999999999999999999998888888874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=93.63  E-value=0.11  Score=35.98  Aligned_cols=43  Identities=30%  Similarity=0.542  Sum_probs=37.6

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .+.++..|+||...+|..+..+.+.+|+.+......+.+.|+.
T Consensus       249 ~~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (323)
T cd05584         249 DAAEVQSHPFFRHVNWDDLLARKVEPPFKPLLQSEEDVSQFDS  291 (323)
T ss_pred             CHHHHhcCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCc
Confidence            4577899999999999999999999999998888888888775

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0606|consensus

Probab=93.61  E-value=0.14  Score=41.59  Aligned_cols=74  Identities=20%  Similarity=0.288  Sum_probs=53.8

Q ss_pred             hHHHhcCcCCCCccCcccCCCCCCCCCC--------CCCcchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCC
Q psy17573          7 WEGLRNRTLIPPILPKIRSQTDSSNFDE--------YPPDQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSS   78 (102)
Q Consensus         7 W~~l~~k~i~pP~~P~~~~~~d~~~fd~--------~~~~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~   78 (102)
                      ++.|+++.+..|-.|.........-...        .....+..+.+.|++|...+|+.|..+.  .+|+|...+..|++
T Consensus      1044 f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~--~~~~p~~~s~~dtS 1121 (1205)
T KOG0606|consen 1044 FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENLALQK--AEFVPQPESTQDTS 1121 (1205)
T ss_pred             hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcccccccc--CccCCCCCCCCccc
Confidence            3567778888888887655443222221        1222344578999999999999998775  67899999999999


Q ss_pred             CCCC
Q psy17573         79 NFDE   82 (102)
Q Consensus        79 ~fd~   82 (102)
                      +|.+
T Consensus      1122 ~~~~ 1125 (1205)
T KOG0606|consen 1122 YFES 1125 (1205)
T ss_pred             hhhc
Confidence            9987

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=93.40  E-value=0.13  Score=35.68  Aligned_cols=35  Identities=34%  Similarity=0.848  Sum_probs=27.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++++|..+..+.+.+|+.|..... ...+|+.+.
T Consensus       259 ~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  293 (323)
T cd05615         259 FFRRIDWDKLENREIQPPFKPKVCGK-GAENFDKFF  293 (323)
T ss_pred             ccCCCCHHHHhcCCCCcCccCccCCC-chhhcCccc
Confidence            79999999999999999999975442 356665543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=93.23  E-value=0.13  Score=35.69  Aligned_cols=34  Identities=35%  Similarity=0.800  Sum_probs=26.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   35 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~   35 (102)
                      ||+.++|..+.++++.+|+.|.... .+..+++.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  292 (323)
T cd05616         259 FFRYIDWEKLERKEVQPPYKPKACG-RDAENFDKF  292 (323)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCcCCC-chhhhcCch
Confidence            7999999999999999999998643 455555543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=93.23  E-value=0.16  Score=35.10  Aligned_cols=33  Identities=39%  Similarity=0.900  Sum_probs=29.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||+.++|..+..+++.||+.|.+....+.++|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (318)
T cd05570         254 FFREIDWDKLERKEIKPPFKPKIKGRFDVSNFD  286 (318)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcC
Confidence            789999999999999999999998877777776

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=93.14  E-value=0.15  Score=35.38  Aligned_cols=33  Identities=42%  Similarity=0.940  Sum_probs=29.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|..+..+.+.+|++|.+....+.+++.
T Consensus       259 ~f~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  291 (324)
T cd05589         259 FFRDINWDDLLARKIKPPFVPTIKGPEDVSNFD  291 (324)
T ss_pred             CcCCCCHHHHHhCCCCcCccCCCCCcchhhhcC
Confidence            799999999999999999999988777777665

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=93.09  E-value=0.15  Score=35.45  Aligned_cols=42  Identities=36%  Similarity=0.681  Sum_probs=34.9

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .++.+++.|+||.+++|..+.  .+.+|+.|......+.++|+.
T Consensus       258 ~~~~~~~~h~~f~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~  299 (331)
T cd05624         258 NGIEDFKKHAFFEGIDWENIR--NLEAPYIPDVSSPSDTSNFDV  299 (331)
T ss_pred             CCHHHHhcCCCcCCCCHHHHh--hCCCCccCCCCCcchhhhcCC
Confidence            356789999999999999885  566889998888888888864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=93.00  E-value=0.09  Score=37.43  Aligned_cols=48  Identities=27%  Similarity=0.430  Sum_probs=38.6

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   86 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~   86 (102)
                      .++.++..|+||....|.....+...+|+.|......+.++|++....
T Consensus       296 ~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  343 (370)
T cd05621         296 NGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDD  343 (370)
T ss_pred             CCHHHHhcCcccCCCCcChHhcCCCCCCcCCCCCCcchhhhcCCcccc
Confidence            356789999999997776666667789999999999999999874443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=92.90  E-value=0.073  Score=36.12  Aligned_cols=31  Identities=23%  Similarity=0.301  Sum_probs=28.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      .+.++..|+||...+|.++.++.++||+.|.
T Consensus       254 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05605         254 GAEEVKAHPFFRTANFKRLEAGMLEPPFCPD  284 (285)
T ss_pred             CHHHHhcCcCccCCCHHHHhhCCCCCCCCCC
Confidence            5668999999999999999999999999883

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=92.77  E-value=0.12  Score=35.86  Aligned_cols=34  Identities=38%  Similarity=0.867  Sum_probs=30.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|..+..+.+.||+.|.+....++.+|+.
T Consensus       253 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T cd05571         253 FFASINWQDVVQKKLEPPFKPQVTSETDTRYFDE  286 (323)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            8999999999999999999999888777777763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0610|consensus

Probab=92.58  E-value=0.068  Score=39.23  Aligned_cols=24  Identities=38%  Similarity=0.758  Sum_probs=19.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQ   26 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~   26 (102)
                      ||+||||.  |-+-.+||+||...+.
T Consensus       394 FF~gVnWa--Lir~~~PP~iP~~~d~  417 (459)
T KOG0610|consen  394 FFEGVNWA--LIRCARPPEIPKPVDG  417 (459)
T ss_pred             cccCCChh--heeccCCCcCCCcccc
Confidence            89999999  3356779999986543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=92.57  E-value=0.13  Score=35.79  Aligned_cols=45  Identities=27%  Similarity=0.626  Sum_probs=36.4

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   86 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~   86 (102)
                      .+.++..|+||..++|..+.  ...||+.|......+..+|+++.+.
T Consensus       250 s~~~ll~h~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  294 (333)
T cd05600         250 SLEDIKNHPFFKEVDWNELR--ELKPPFVPELESEIDTGYFDDFENE  294 (333)
T ss_pred             CHHHHHhCcccCCCCHHHHh--hCCCCCCCCCCCcchhhhccCCCCc
Confidence            56789999999999999887  6678999988887788877764443

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=92.47  E-value=0.18  Score=34.99  Aligned_cols=43  Identities=35%  Similarity=0.625  Sum_probs=37.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .+.++..|+||.+.+|..+..+++.+|+.|......+.++|..
T Consensus       260 ~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (332)
T cd05614         260 GASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNELDVGNFAE  302 (332)
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            5568999999999999999999999999998888888877764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=92.37  E-value=0.14  Score=36.31  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=38.5

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   83 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~   83 (102)
                      .++.++..|+||.+.+|.....+...+|+.|......+.++|++.
T Consensus       296 ~s~~ell~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  340 (370)
T cd05596         296 NGVDEIKSHPFFKNDQWTFDNIRETVAPVVPELSSDIDTSNFDDI  340 (370)
T ss_pred             CCHHHHhcCcccCCCChhhHHhcCCCcCccCcCCCcchhhhcCCc
Confidence            356789999999999998777778889999999888899999873

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=92.28  E-value=0.23  Score=34.44  Aligned_cols=42  Identities=33%  Similarity=0.668  Sum_probs=35.2

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      -++.++..|+||..++|..+.+  ..||+.|......+.++|..
T Consensus       255 ~t~~~l~~h~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  296 (330)
T cd05601         255 LGYEGLCCHPFFSKIDWNNIRN--SLPPFVPTLKSDDDTSNFDE  296 (330)
T ss_pred             CCHHHHhCCCCcCCCCHHHHhh--CCCCccCcCCCcchhhhcCC
Confidence            3456789999999999998864  56888999988889999976

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=92.12  E-value=0.17  Score=34.32  Aligned_cols=35  Identities=43%  Similarity=1.065  Sum_probs=31.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   35 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~   35 (102)
                      ||+.++|..+....+.+|+.|......+++.|++|
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (290)
T cd05580         256 WFAGIDWIALLQRKIEAPFIPKVKGPGDTSNFDDY  290 (290)
T ss_pred             ccccCCHHHHhhccCCCCccCCCCCccccccccCC
Confidence            78999999999999999999999888888888764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=92.04  E-value=0.27  Score=34.28  Aligned_cols=42  Identities=33%  Similarity=0.672  Sum_probs=34.9

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ..+.++..|+||.+++|..+..  ..+|+.|......++++|+.
T Consensus       258 ~~~~~~l~hp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  299 (331)
T cd05597         258 NGLQDFKDHPFFEGIDWDNIRN--STAPYVPEVSSPTDTSNFDV  299 (331)
T ss_pred             CCHHHHhcCCCCCCCCHHHHhh--CCCCccCcCCCcchhhhcCC
Confidence            3567899999999999998864  46789999888888888875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=92.04  E-value=0.22  Score=35.27  Aligned_cols=42  Identities=26%  Similarity=0.589  Sum_probs=35.4

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .++.++..|+||.+++|+.+.  .+.+|+.|.++...+..+|..
T Consensus       297 ~~~~~~l~hp~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  338 (377)
T cd05629         297 GGAHEIKSHPFFRGVDWDTIR--QIRAPFIPQLKSITDTSYFPT  338 (377)
T ss_pred             CCHHHHhcCCCcCCCCHHHHc--cCCCCcccCCCCccccccCCc
Confidence            366789999999999999884  667899999988888888764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=91.98  E-value=0.27  Score=34.56  Aligned_cols=37  Identities=43%  Similarity=0.934  Sum_probs=28.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCcc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ   39 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~~   39 (102)
                      ||++++|..+..+....|.  .+.+..++++|+.++...
T Consensus       295 ~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  331 (360)
T cd05627         295 FFEGVDWGHIRERPAAIPI--EIKSIDDTSNFDEFPESD  331 (360)
T ss_pred             CCCCCCHHHHhcCCCCCCc--cCCCcchhhhcCCCCccc
Confidence            8999999999988766664  456667788888766543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=91.71  E-value=0.098  Score=35.39  Aligned_cols=31  Identities=26%  Similarity=0.408  Sum_probs=27.2

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      .+.++..|+||++++|..+....+.+|+.|.
T Consensus       250 ~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~  280 (280)
T cd05608         250 NCDGLRTHPLFRDLNWRQLEAGMLPPPFVPD  280 (280)
T ss_pred             CHHHHhcChhhhcCCHhHHhhccCCCCCCCC
Confidence            4567899999999999999999999998873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=91.59  E-value=0.45  Score=32.84  Aligned_cols=43  Identities=23%  Similarity=0.528  Sum_probs=36.5

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ...++..|.||..++|..+..+.+.+|+.|......+...++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (321)
T cd05603         244 DFLEIKNHVFFSPINWDDLYHKRITPPYNPNVAGPADLRHFDP  286 (321)
T ss_pred             CHHHHhCCCCcCCCCHHHHhcCCCCCCcCCCCCCcchhhhcCC
Confidence            3457889999999999999999999999988877777777764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=91.58  E-value=0.33  Score=33.57  Aligned_cols=34  Identities=47%  Similarity=1.028  Sum_probs=30.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+.++|..+..+++.||+.|..+...+..+|+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05592         250 FFRGIDWERLEKREIPPPFKPKVKSPSDASNFDR  283 (316)
T ss_pred             ccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            7899999999999999999999988888888874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=91.30  E-value=0.18  Score=34.06  Aligned_cols=29  Identities=21%  Similarity=0.371  Sum_probs=25.5

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      .++..|+||++++|.++..+.+.+|+.|.
T Consensus       249 ~~~~~h~~f~~~~~~~~~~~~~~~~~~~~  277 (277)
T cd05607         249 DDPRKHEFFKTINFPRLEAGLIPPPFVPD  277 (277)
T ss_pred             hhhhcChhhcCCCHHHHhcCcCCCCCCCC
Confidence            56778999999999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=91.21  E-value=0.13  Score=34.89  Aligned_cols=30  Identities=23%  Similarity=0.297  Sum_probs=27.4

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      +.++..|+||..++|.++...+..|||+|.
T Consensus       255 ~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05630         255 AREVKEHPLFKQINFKRLEAGMLEPPFKPD  284 (285)
T ss_pred             hHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence            678999999999999999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=90.78  E-value=0.32  Score=33.83  Aligned_cols=37  Identities=41%  Similarity=0.833  Sum_probs=31.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP   37 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~   37 (102)
                      ||++++|..+..+.+.+|..+.+....++.+|..++.
T Consensus       273 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (329)
T PTZ00263        273 YFHGANWDKLYARYYPAPIPVRVKSPGDTSNFEKYPD  309 (329)
T ss_pred             ccCCCCHHHHHhCCCCCCcCCCCCCcccchhccCCcc
Confidence            7999999999999999998888877778888876654

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=90.50  E-value=0.39  Score=33.10  Aligned_cols=42  Identities=24%  Similarity=0.472  Sum_probs=35.2

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      +.++..|+||..++|..+..+++.+|+.|......+..+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (318)
T cd05582         248 VEEIKRHPFFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFDP  289 (318)
T ss_pred             HHHHhCCCCcCCCCHHHHHhcCCCCCcCCCCCCcchhhhcCc
Confidence            567899999999999999999999999998776666666654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=90.44  E-value=0.5  Score=32.86  Aligned_cols=33  Identities=36%  Similarity=0.863  Sum_probs=28.3

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||+.++|+.+..+++.||+.|.+....+..+|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (329)
T cd05588         264 FFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFD  296 (329)
T ss_pred             CCCCCCHHHHHhCCCCCCccccCCCcchhhhcC
Confidence            799999999999999999999987766666665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=90.33  E-value=0.46  Score=33.06  Aligned_cols=34  Identities=41%  Similarity=0.995  Sum_probs=29.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||.+++|..+..+++.+|+.|.+....+...|+.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (328)
T cd05593         253 FFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDE  286 (328)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence            7999999999999999999999888777777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=89.83  E-value=0.39  Score=34.19  Aligned_cols=45  Identities=24%  Similarity=0.434  Sum_probs=36.7

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   83 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~   83 (102)
                      .++.+++.|+||.+..|.....+...+|+.|......+.++|++.
T Consensus       296 ~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (371)
T cd05622         296 NGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDI  340 (371)
T ss_pred             CCHHHHhcCcccCCCChhHHhcCCCCCCCCCCCCCcchhhhcCCC
Confidence            356789999999997776655677788999998888888888763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=89.53  E-value=0.37  Score=33.32  Aligned_cols=33  Identities=39%  Similarity=0.873  Sum_probs=28.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|..+..+++.+|+.|......+..+|+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (321)
T cd05591         256 FFKEIDWVLLEQRKIKPPFKPKIKTKRDVNNFD  288 (321)
T ss_pred             ccCCCCHHHHHhCCCCCCCCCCCCCcchhhhcC
Confidence            799999999999999999999887666666665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=89.27  E-value=0.46  Score=33.11  Aligned_cols=33  Identities=27%  Similarity=0.780  Sum_probs=27.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|+.+..+++.||+.|.+....+..+++
T Consensus       264 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (329)
T cd05618         264 FFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFD  296 (329)
T ss_pred             CCCCCCHHHHHcCCCCcCccCCCCCcccchhcC
Confidence            799999999999999999999987655555554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PF00433 Pkinase_C: Protein kinase C terminal domain; InterPro: IPR017892 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=88.80  E-value=0.11  Score=26.39  Aligned_cols=24  Identities=33%  Similarity=0.591  Sum_probs=16.1

Q ss_pred             cCCCCCCCCCCCC-CCCCCCCCCCC
Q psy17573         70 KIRSQTDSSNFDE-YPPDQDPPPAD   93 (102)
Q Consensus        70 ~~~~~~d~~~fd~-~~~~~~~~~~~   93 (102)
                      ++++..|++|||. |+.+....+|.
T Consensus         1 ~v~~~~DtsnFD~eFt~~~~~~t~~   25 (48)
T PF00433_consen    1 KVKSETDTSNFDPEFTEEPPVDTPP   25 (48)
T ss_dssp             S-SSTT-GTTSCHHHHTSSSSS--S
T ss_pred             CCCchhhhhhcCcccccCCCCCCCc
Confidence            3678899999998 88887766664

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain is found in a large variety of protein kinases with different functions and dependencies. Protein kinase C, for example, is a calcium-activated, phospholipid-dependent serine- and threonine-specific enzyme. It is activated by diacylglycerol which, in turn, phosphorylates a range of cellular proteins. This domain is most often found associated with IPR000719 from INTERPRO.; GO: 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3E8D_A 1MRV_A 3E88_A 1GZO_A 1GZK_A 2JDO_A 2JDR_A 1MRY_A 1GZN_A 1O6L_A ....

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=88.64  E-value=0.46  Score=32.90  Aligned_cols=33  Identities=33%  Similarity=0.846  Sum_probs=28.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||+.++|..+..+++.+|+.|.+....+...|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (323)
T cd05575         253 FFSSINWDDLVNKKITPPFNPNVSGPMDLKHFD  285 (323)
T ss_pred             CcCCCCHHHHhhccCCCCcCCCCCCcchhhhcC
Confidence            789999999999999999999987776666665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=88.35  E-value=0.51  Score=33.48  Aligned_cols=35  Identities=31%  Similarity=0.538  Sum_probs=29.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++++|...+. +..+|++|.+....++++|+...
T Consensus       307 ~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  341 (382)
T cd05625         307 FFKTIDFSSDLR-QQSAPYIPKITHPTDTSNFDPVD  341 (382)
T ss_pred             CcCCcChHHHHh-cCCCCccCcCCCcchhhhcCCCC
Confidence            799999998774 56789999999999999987544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=87.50  E-value=0.66  Score=31.92  Aligned_cols=34  Identities=38%  Similarity=0.809  Sum_probs=30.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+.++|..+..+.+.+++.|.+....++++|+.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (312)
T cd05585         249 FFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDE  282 (312)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCc
Confidence            7899999999999999999999988888888763

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=87.46  E-value=0.54  Score=32.54  Aligned_cols=33  Identities=33%  Similarity=0.830  Sum_probs=28.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||..++|+.+..+++.+|+.|.+....+...|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd05602         253 FFSPINWDDLINKKITPPFNPNVSGPNDLRHFD  285 (325)
T ss_pred             ccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcC
Confidence            688999999999999999999988877777765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=87.46  E-value=0.61  Score=32.25  Aligned_cols=34  Identities=47%  Similarity=0.926  Sum_probs=29.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|..+..+.+.+|+.|......+..+|++
T Consensus       250 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd05620         250 FFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR  283 (316)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            7999999999999999999999888777777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=87.29  E-value=0.81  Score=31.53  Aligned_cols=33  Identities=30%  Similarity=0.724  Sum_probs=26.3

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||+.++|..+..+++.+|+.|......+..+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (318)
T cd05582         256 FFSTIDWNKLYRREIKPPFKPAVGRPDDTFYFD  288 (318)
T ss_pred             CcCCCCHHHHHhcCCCCCcCCCCCCcchhhhcC
Confidence            799999999999999999999876555444443

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=87.20  E-value=0.72  Score=31.99  Aligned_cols=35  Identities=31%  Similarity=0.802  Sum_probs=30.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   35 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~   35 (102)
                      ||.+++|..+..+.+.||+.|.+.+..+...|+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (323)
T cd05595         253 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDE  287 (323)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcc
Confidence            79999999999999999999998887777777643

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=87.12  E-value=0.67  Score=32.07  Aligned_cols=34  Identities=32%  Similarity=0.831  Sum_probs=29.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|..+..+++.+|+.|.+....+.++|+.
T Consensus       253 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05604         253 FFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA  286 (325)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCC
Confidence            7999999999999999999999888777777763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=86.76  E-value=0.46  Score=32.05  Aligned_cols=31  Identities=19%  Similarity=0.468  Sum_probs=26.5

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      .++.++..|+||+.++|+.+.++...+||.|
T Consensus       258 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  288 (288)
T cd05583         258 NGADEIKNHPFFQGIDWDDLAAKRIPAPFKP  288 (288)
T ss_pred             chHHHHhcCcccccCCHHHHhhhccCCCCCC
Confidence            3456789999999999999999999888864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=86.29  E-value=0.8  Score=32.15  Aligned_cols=36  Identities=42%  Similarity=0.913  Sum_probs=28.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++++|+.+..  ..+|++|.+.+..+.++|+.+...
T Consensus       298 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  333 (364)
T cd05599         298 FFKGVDWEHIRE--RPAPIIPELKSITDTSNFDDFEEI  333 (364)
T ss_pred             CcCCCCHHHHhh--cCCCCCCCCCCchhhhhccccccc
Confidence            899999998864  458899998888888888765543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=85.86  E-value=0.45  Score=32.22  Aligned_cols=31  Identities=23%  Similarity=0.356  Sum_probs=27.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeecc
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPK   70 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~   70 (102)
                      ++.++..|+||+.++|.++..+++.|||.|.
T Consensus       254 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (285)
T cd05632         254 GAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD  284 (285)
T ss_pred             ChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence            3678999999999999999999999999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=85.04  E-value=0.43  Score=32.03  Aligned_cols=30  Identities=27%  Similarity=0.476  Sum_probs=26.5

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      .+.++..|+||..++|.++.+...+|||.|
T Consensus       247 ~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~  276 (277)
T cd05577         247 SADEVREHPLFKDLNWRRLEAGMLEPPFIP  276 (277)
T ss_pred             cHHHHHhChhhhcCChhhhhcCCCCCCCCC
Confidence            556789999999999999998888899876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=84.84  E-value=1.1  Score=31.01  Aligned_cols=34  Identities=38%  Similarity=0.930  Sum_probs=29.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+++.|..+..+.+.+|+.|......++..|+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (325)
T cd05594         254 FFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDE  287 (325)
T ss_pred             CcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence            7999999999999999999998877777777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=84.41  E-value=1.1  Score=31.01  Aligned_cols=33  Identities=36%  Similarity=0.832  Sum_probs=28.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||+.++|+.+..+.+.+|+.|.+....+.++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (330)
T cd05586         255 FFADIDWDLLSKKQITPPFKPIVDSDEDVSNFD  287 (330)
T ss_pred             cccCCCHHHHHhCCCCCCccCCCCCCcchhhcC
Confidence            789999999999999999999987777777765

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=84.39  E-value=1.4  Score=31.11  Aligned_cols=35  Identities=49%  Similarity=1.013  Sum_probs=25.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP   37 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~   37 (102)
                      ||++++|..+..+....|+  .+.+..++++|+.+..
T Consensus       295 ~f~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  329 (363)
T cd05628         295 FFEGVDWEHIRERPAAIPI--EIKSIDDTSNFDEFPD  329 (363)
T ss_pred             CCCCCCHHHHHhCCCCCCc--cCCCcchhhccCCCCc
Confidence            8999999999887665554  4556667778876554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=83.63  E-value=1.2  Score=31.58  Aligned_cols=34  Identities=32%  Similarity=0.529  Sum_probs=28.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   35 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~   35 (102)
                      ||++++|...+. ...+|++|.+....++++|+..
T Consensus       307 ~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~  340 (381)
T cd05626         307 FFSEVDFSSDIR-TQPAPYVPKISHPMDTSNFDPV  340 (381)
T ss_pred             ccCCCChhHHhh-cCCCCccCcCCCcchhhhcCCC
Confidence            799999998774 5678999999988888888743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=83.42  E-value=1.2  Score=30.97  Aligned_cols=36  Identities=44%  Similarity=1.014  Sum_probs=29.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++++|..+.  +..+|.+|.+....++.+|+.....
T Consensus       287 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  322 (350)
T cd05573         287 FFKGIDWENLR--ETKPPFVPELSSPLDTSNFDDFEDD  322 (350)
T ss_pred             CcCCCCHHHHh--hCCCCcCCCCCCchhhhhcCCCCcc
Confidence            79999999887  5669999999988888888865543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=81.54  E-value=2  Score=30.31  Aligned_cols=36  Identities=42%  Similarity=0.770  Sum_probs=29.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPP   37 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~   37 (102)
                      ||++++|..+. +...+|++|.+....++++|+....
T Consensus       303 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  338 (376)
T cd05598         303 FFKGIDFASLI-RRQKAPYIPKITHPTDTSNFDPVDP  338 (376)
T ss_pred             CcCCCCHHHHh-hcCCCCCCCcCCCcchhhhcCCCCc
Confidence            79999999988 6778999999888888888765443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=81.39  E-value=1.7  Score=30.77  Aligned_cols=31  Identities=35%  Similarity=0.917  Sum_probs=25.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|+.+  +.+.+|++|.+....++.+|.
T Consensus       307 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  337 (377)
T cd05629         307 FFRGVDWDTI--RQIRAPFIPQLKSITDTSYFP  337 (377)
T ss_pred             CcCCCCHHHH--ccCCCCcccCCCCccccccCC
Confidence            7999999998  477899999987777766654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=80.92  E-value=2  Score=29.74  Aligned_cols=36  Identities=33%  Similarity=0.895  Sum_probs=28.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++++|..+.  .+.||++|.+....+..++++....
T Consensus       259 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  294 (333)
T cd05600         259 FFKEVDWNELR--ELKPPFVPELESEIDTGYFDDFENE  294 (333)
T ss_pred             ccCCCCHHHHh--hCCCCCCCCCCCcchhhhccCCCCc
Confidence            79999999887  7789999998877777777655443

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=80.42  E-value=1.1  Score=30.19  Aligned_cols=30  Identities=20%  Similarity=0.516  Sum_probs=24.8

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      .+.++..|+||++++|..+...+..+|.+|
T Consensus       248 ~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~  277 (279)
T cd05633         248 GAQEVKEHVFFKGIDWQQVYLQKYPPPLIP  277 (279)
T ss_pred             CHHHHHhCccccCCCHhHHhcCCCCCCCCC
Confidence            467899999999999999887777777555

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=80.39  E-value=1.5  Score=30.44  Aligned_cols=31  Identities=45%  Similarity=1.063  Sum_probs=24.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++++|..+.  .+.+|++|......+..+++
T Consensus       268 ~f~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~  298 (331)
T cd05624         268 FFEGIDWENIR--NLEAPYIPDVSSPSDTSNFD  298 (331)
T ss_pred             CcCCCCHHHHh--hCCCCccCCCCCcchhhhcC
Confidence            79999999985  67799999877666655554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	102
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		3e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-04
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		6e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-04

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I ++ P R +D      L  
Sbjct: 266 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR-YDSLGLLELDQ 324
Query: 61  RTLIP 65
           RT  P
Sbjct: 325 RTHFP 329

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I ++ P R +D      L  
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR-YDSLGLLELDQ 321
Query: 61  RTLIP 65
           RT  P
Sbjct: 322 RTHFP 326

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I ++ P R +D      L  
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPPDR-YDSLGLLELDQ 321
Query: 61  RTLIP 65
           RT  P
Sbjct: 322 RTHFP 326

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +WE L NR + PP  PK+  +  + NFD++         PPDQ +  +     F+
Sbjct: 278 FFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLXPPDQLVIANIDQSDFE 336
Query: 52  GFNWEGLRNRTLIPPIL 68
           GF +    N   + PIL
Sbjct: 337 GFXYV---NPQFVHPIL 350

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRWFDGFNWEGLRN 60
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I +  P R +D      L  
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITIXPPDR-YDSLGLLELDQ 321
Query: 61  RTLIP 65
           RT  P
Sbjct: 322 RTHFP 326

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
           +F+G NWE +RN  L  P +P + S +D+SNFD
Sbjct: 357 FFEGLNWENIRN--LEAPYIPDVSSPSDTSNFD 387

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD 33
           +F+G NWE +RN  L  P +P + S +D+SNFD
Sbjct: 341 FFEGLNWENIRN--LEAPYIPDVSSPSDTSNFD 371

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-16
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-14
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	3e-12
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-10
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-12
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-12
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-09
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-08
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-07
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-08
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	4e-08
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-07
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	6e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	7e-08
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-07
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-07
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-07
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	8e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	9e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-08
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-07
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-07
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-06
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-06
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-04

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 70.0 bits (172), Expect = 6e-16
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWD-ADF 102
           +WF   +W  +  R +  P +PK +   D+SNFD+Y  ++     ++  G +  +F
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCGKEFTEF 350

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 64.6 bits (158), Expect = 6e-14
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFPCRW---FDGF 53
           WF   +W  +  R +  P +PK +   D+SNFD+Y  ++ I +S   +    F  F
Sbjct: 296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDY-EEEEIRVSINEKCGKEFTEF 350

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 59.9 bits (146), Expect = 3e-12
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRS-QTDSSNFDEYP---PDQDPPPADDLTGWDADF 102
            WF    WE L +R +  P  P I+  Q D+S FD+YP    +      D       DF
Sbjct: 260 PWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYADLFRDF 318

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRS-QTDSSNFDEYP---PDQAIFLSFPCR-WFDGF 53
           WF    WE L +R +  P  P I+  Q D+S FD+YP    +  +    P    F  F
Sbjct: 261 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQGEDPYADLFRDF 318

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 59.3 bits (144), Expect = 5e-12
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 4/59 (6%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP----PDQDPPPADDLTGWDADF 102
            +F    W     R  + P++P + S  D+SNFD+       ++  P      G    F
Sbjct: 331 LFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPKAFVGNQLPF 389

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 59.3 bits (144), Expect = 5e-12
 Identities = 14/46 (30%), Positives = 23/46 (50%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           +F    W     R  + P++P + S  D+SNFD+   D+    +FP
Sbjct: 332 FFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFP 377

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 52.1 bits (125), Expect = 2e-09
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADD 94
           +F G +W+ +RN     P +P++ S TD+SNFD             
Sbjct: 341 FFSGIDWDNIRN--CEAPYIPEVSSPTDTSNFDVDDDCLKNSETMP 384

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           +F G +W+ +RN     P +P++ S TD+SNFD          + P
Sbjct: 341 FFSGIDWDNIRN--CEAPYIPEVSSPTDTSNFDVDDDCLKNSETMP 384

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 9/62 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
            F   NWE L  + + PP  PK++S  D SNFD+            D+A+  S     F 
Sbjct: 272 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMDQNMFR 331

Query: 52  GF 53
            F
Sbjct: 332 NF 333

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPPPADDLTGWD 99
            F   NWE L  + + PP  PK++S  D SNFD+      P         +   D
Sbjct: 272 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFADRALINSMD 326

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 48.6 bits (116), Expect = 3e-08
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADD 94
           +F G +W+GLR+   +PP  P     TD+ NFD          +  
Sbjct: 330 FFFGLDWDGLRD--SVPPFTPDFEGATDTCNFDLVEDGLTAMVSGG 373

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 47.8 bits (114), Expect = 6e-08
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           +F G +W+GLR+   +PP  P     TD+ NFD         +S  
Sbjct: 330 FFFGLDWDGLRD--SVPPFTPDFEGATDTCNFDLVEDGLTAMVSGG 373

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 48.4 bits (116), Expect = 4e-08
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +W+ +  + ++PP  P I  +    NFD           P D  I        F+
Sbjct: 278 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFE 337

Query: 52  GF 53
           GF
Sbjct: 338 GF 339

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 46.1 bits (110), Expect = 3e-07
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPPPADDLTGWD 99
           +F   +W+ +  + ++PP  P I  +    NFD      P    P   D +   D
Sbjct: 278 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKID 332

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 47.7 bits (114), Expect = 6e-08
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +W+ +  + ++PP  P I  +    NFD           P D  I        F+
Sbjct: 321 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFE 380

Query: 52  GF 53
           GF
Sbjct: 381 GF 382

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPPPADDLTGWD 99
           +F   +W+ +  + ++PP  P I  +    NFD      P    P   D +   D
Sbjct: 321 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKID 375

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 47.6 bits (114), Expect = 7e-08
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 9/62 (14%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +W  L +R + PP  P+I+S+ D SNFD           P D+          F 
Sbjct: 283 FFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFR 342

Query: 52  GF 53
            F
Sbjct: 343 NF 344

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 9/55 (16%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQDPPPADD 94
           +F   +W  L +R + PP  P+I+S+ D SNFD           P D+   P  +
Sbjct: 283 FFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMIN 337

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 47.4 bits (113), Expect = 7e-08
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
           R+F G  W+ +  + L PP  P++ S+TD+  FDE
Sbjct: 406 RFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 47.0 bits (112), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F G  W+ +  + L PP  P++ S+TD+  FDE
Sbjct: 407 FFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 47.3 bits (113), Expect = 8e-08
 Identities = 13/48 (27%), Positives = 21/48 (43%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLT 96
           +F   NW+ L N+ + PP  P +    D  +FD    ++  P A    
Sbjct: 296 FFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEPVPNAIGKA 343

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 46.1 bits (110), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   NW+ L N+ + PP  P +    D  +FD 
Sbjct: 296 FFSLINWDDLINKKITPPFNPNVSGPNDLRHFDP 329

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
            +F   +W  L  R + PP  P      D+  FD 
Sbjct: 283 SFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDP 317

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   +W  L  R + PP  P      D+  FD 
Sbjct: 284 FFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDP 317

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 47.2 bits (113), Expect = 9e-08
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
            +F   NWE L  R + PP  P ++S+ D S FD 
Sbjct: 278 PFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS 312

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   NWE L  R + PP  P ++S+ D S FD 
Sbjct: 279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS 312

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 45.7 bits (109), Expect = 3e-07
 Identities = 12/33 (36%), Positives = 17/33 (51%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF 80
            +F   NW+ L  + +  P  P IR + D SNF
Sbjct: 323 LFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 12/32 (37%), Positives = 17/32 (53%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF 32
           +F   NW+ L  + +  P  P IR + D SNF
Sbjct: 324 FFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           +F   NW+ +  + L+PP  P++ S+ D+  FD+
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 45.3 bits (108), Expect = 4e-07
 Identities = 11/34 (32%), Positives = 21/34 (61%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
           +F   NW+ +  + L+PP  P++ S+ D+  FD+
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 43.3 bits (102), Expect = 2e-06
 Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 17/103 (16%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIR-----SQTDSSNFDEY--------PPDQAIFLSF-- 45
           +F   +W+ +  +   PP++P           D  +FDE           DQ ++ +F  
Sbjct: 452 FFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPL 511

Query: 46  --PCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD 86
               RW                  L   +   +     E    
Sbjct: 512 TISERWQQEVAETVFDTINAETDRLEARKKTKNKQLGHEEDYA 554

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 43.0 bits (102), Expect = 3e-06
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 10/64 (15%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +WE L  + + PP  PK     ++ NFD +         PPDQ +  +     F+
Sbjct: 279 FFRYIDWEKLERKEIQPPYKPKACG-RNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFE 337

Query: 52  GFNW 55
           GF++
Sbjct: 338 GFSF 341

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY----PPDQDPPPADDLTGWD 99
           +F   +WE L  + + PP  PK     ++ NFD +    PP   PP  + +   D
Sbjct: 279 FFRYIDWEKLERKEIQPPYKPKACG-RNAENFDRFFTRHPPVLTPPDQEVIRNID 332

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 43.1 bits (101), Expect = 3e-06
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 10/64 (15%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY---------PPDQAIFLSFPCRWFD 51
           +F   +WE L  + + PP  PK  S  ++ NFD +         PPDQ +  +     F+
Sbjct: 600 FFRYIDWEKLERKEIQPPYKPKA-SGRNAENFDRFFTRHPPVLTPPDQEVIRNIDQSEFE 658

Query: 52  GFNW 55
           GF++
Sbjct: 659 GFSF 662

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 41.2 bits (96), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE----YPPDQDPPPADDLTGWD 99
           +F   +WE L  + + PP  PK  S  ++ NFD     +PP   PP  + +   D
Sbjct: 600 FFRYIDWEKLERKEIQPPYKPKA-SGRNAENFDRFFTRHPPVLTPPDQEVIRNID 653

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 11/57 (19%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQ--TDSSNFDEY---------PPDQAIFLSFP 46
            F   N++ L    L PP  P  ++    D  + +++         P DQ  +  F 
Sbjct: 447 LFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPTDQDFYQKFA 503

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 38.6 bits (90), Expect = 9e-05
 Identities = 13/57 (22%), Positives = 16/57 (28%), Gaps = 11/57 (19%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIR-----SQTDSSNFDEY------PPDQAIFLSFP 46
            F   +W  L    L PP +P  R     +  D   F           D   F  F 
Sbjct: 451 LFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTEFFQEFA 507

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 34
           + +  NW+ +  + LIP  +P         N D 
Sbjct: 274 YMNDINWDAVFQKRLIPGFIPNK----GRLNCDP 303

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 37.3 bits (87), Expect = 3e-04
 Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE 82
           + +  NW+ +  + LIP  +P         N D 
Sbjct: 274 YMNDINWDAVFQKRLIPGFIPNK----GRLNCDP 303

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.74
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.62
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.52
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.47
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	98.4
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.37
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.34
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.33
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.33
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.32
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	98.31
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.28
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.12
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.1
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	97.94
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	97.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	97.9
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.89
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.82
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	97.78
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	97.76
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	97.71
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	97.67
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	97.65
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	97.62
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	97.52
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	97.5
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	97.48
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	97.42
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	97.41
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	97.37
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	97.24
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	97.19
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	97.02
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.73
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.25
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.08
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	95.67
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	94.83
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	92.74

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.74  E-value=2.4e-09  Score=75.70  Aligned_cols=55  Identities=20%  Similarity=0.465  Sum_probs=50.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      ++.+++.|+||++++|+.+.++++.|||+|.+.+..|++|||. |+++....+|++
T Consensus       312 ~~~ei~~Hpff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~~~~~~~~  367 (396)
T 4dc2_A          312 GFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDD  367 (396)
T ss_dssp             HHHHHHHSTTTTTCCHHHHHTTCSCCSCCCCCCSSTTGGGSCHHHHTSCCCCCCCC
T ss_pred             CHHHHhcCccccCCCHHHHHcCCCCCCCcCCCCCccchhhcChhhccCCCccCCCc
Confidence            5678999999999999999999999999999999999999997 777777777765

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.62  E-value=1.5e-08  Score=70.44  Aligned_cols=57  Identities=26%  Similarity=0.499  Sum_probs=48.8

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADDL   95 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~~   95 (102)
                      .+..+++.|+||++++|..+..++++|||+|.+++..|++|||. |+.+...++|.+.
T Consensus       273 ~~~~~il~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~f~~~~~~~~~~~~~~~~  330 (353)
T 3txo_A          273 GGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDE  330 (353)
T ss_dssp             TCTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCHHHHTSCCCCCCCCT
T ss_pred             CCHHHHhhCCcccCCCHHHHhcCcCCCCccCCCCCcccccccCcccccCCCcCCCccc
Confidence            34477999999999999999999999999999999999999997 6666666666553

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.52  E-value=1.2e-07  Score=65.71  Aligned_cols=54  Identities=24%  Similarity=0.533  Sum_probs=47.5

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPA   92 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~~~~~   92 (102)
                      .++.+++.|+||.+++|..+.+++++|||+|.+.+..|++||+.++.+.....+
T Consensus       286 ~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~~~~~~~~~~~~  339 (350)
T 1rdq_E          286 NGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSI  339 (350)
T ss_dssp             TTTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCCCCCCCS
T ss_pred             CCHHHHHhCcCcCCCCHHHHhhccCCCCCCCCCCCcccccccccccccccccCC
Confidence            347889999999999999999999999999999999999999987777654444

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.47  E-value=3e-08  Score=74.23  Aligned_cols=55  Identities=22%  Similarity=0.396  Sum_probs=47.9

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      .++.+++.|+||++++|+.|.+++++|||+|.+.+ .|++|||. |+.+...++|.+
T Consensus       590 ~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~~~~~~~~~~~~~~  645 (674)
T 3pfq_A          590 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFDRFFTRHPPVLTPPD  645 (674)
T ss_dssp             THHHHHHSSGGGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTTTTTSSCSSCCCCC
T ss_pred             CcHHHHhcCccccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCchhccCCCccCCCc
Confidence            45578999999999999999999999999999988 89999998 666666666665

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=98.40  E-value=8.4e-08  Score=66.25  Aligned_cols=53  Identities=23%  Similarity=0.528  Sum_probs=44.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPA   92 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~   92 (102)
                      ++.+++.|+||.+++|+.+.++++.|||+|.+.+..|+++|+. |+.+....+|
T Consensus       254 ~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~~  307 (337)
T 1o6l_A          254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITP  307 (337)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTSCCC---
T ss_pred             CHHHHHcCCCcCCCCHHHHHhCCCCCCCCCCCCCcchhhcccchhccCccCcCC
Confidence            5678999999999999999999999999999999999999996 6655544444

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.37  E-value=2.5e-07  Score=69.70  Aligned_cols=44  Identities=16%  Similarity=0.348  Sum_probs=38.5

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      .++.+++.|+||++++|+.|..++++|||+|.+....++++||.
T Consensus       442 ~ga~ei~~HpfF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD~  485 (689)
T 3v5w_A          442 RGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDI  485 (689)
T ss_dssp             STHHHHTTSGGGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC-
T ss_pred             CCHHHHhcCccccCCCHHHHHcCCCCcCccCCCCCCCcCCCCCC
Confidence            45788999999999999999999999999998888777777764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.34  E-value=5.5e-08  Score=67.62  Aligned_cols=53  Identities=21%  Similarity=0.384  Sum_probs=42.1

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPA   92 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~   92 (102)
                      .++.+++.|+||++++|+.+.+++++|||+|.+++. |++||+. ++......+|
T Consensus       269 ~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p~~~~~-~~~~f~~~~~~~~~~~~~  322 (353)
T 2i0e_A          269 EGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRFFTRHPPVLTP  322 (353)
T ss_dssp             THHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCC---CHHHHHHHHSCCCCCC
T ss_pred             CCHHHHhcCccccCCCHHHHHhCCCCCCcCCCCCCc-chhhccchhccCCcccCC
Confidence            356889999999999999999999999999999988 9999986 4444433444

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.33  E-value=1.6e-07  Score=65.11  Aligned_cols=51  Identities=29%  Similarity=0.498  Sum_probs=22.4

Q ss_pred             cccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCC
Q psy17573         43 LSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPAD   93 (102)
Q Consensus        43 ~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~   93 (102)
                      +++.|+||++++|+.+..+++.|||+|.+++..|++||+. ++++....++.
T Consensus       266 ~i~~hp~f~~~~w~~l~~~~~~~p~~p~~~~~~d~~~f~~~~~~~~~~~~~~  317 (345)
T 1xjd_A          266 DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFA  317 (345)
T ss_dssp             CGGGSGGGTTCCHHHHHTTCSCC-----------------------------
T ss_pred             HHHcCccccCCCHHHHhhCCCCCCcCCCCCCcchhhhcchhhcccCccCCcc
Confidence            7999999999999999999999999999999999999996 76665444443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.33  E-value=1.4e-07  Score=65.28  Aligned_cols=55  Identities=20%  Similarity=0.465  Sum_probs=46.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      ++.+++.|+||++++|+.+.++++.|||+|.+.+..|++||+. ++.+....+|.+
T Consensus       269 ~~~~i~~hp~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (345)
T 3a8x_A          269 GFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDD  324 (345)
T ss_dssp             HHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCTTTCGGGSCHHHHTSCSSCCCCC
T ss_pred             CHHHHhcCCccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcccccCcccCCCcc
Confidence            4578999999999999999999999999999999999999997 666555455543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.32  E-value=2.2e-07  Score=65.02  Aligned_cols=49  Identities=22%  Similarity=0.535  Sum_probs=32.7

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQ   87 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~   87 (102)
                      .+..+++.|+||++++|+.|.+++++|||+|.+.+..|++||+. |+.+.
T Consensus       286 ~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~  335 (373)
T 2r5t_A          286 DDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFDPEFTEEP  335 (373)
T ss_dssp             TTHHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCCC---------------
T ss_pred             CCHHHHhCCccccCCCHHHHHhCCCCCCCCCCCCCcchhhhcCccccccc
Confidence            45578999999999999999999999999999999999999996 65554

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=98.31  E-value=2e-07  Score=66.11  Aligned_cols=49  Identities=24%  Similarity=0.426  Sum_probs=43.8

Q ss_pred             cchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCC
Q psy17573         38 DQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   86 (102)
Q Consensus        38 ~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~   86 (102)
                      ..++.+++.|+||++++|..+..+++.|||+|.+++..|++|||.+..+
T Consensus       321 R~~~~ei~~Hp~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd~~~~~  369 (410)
T 3v8s_A          321 RNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEED  369 (410)
T ss_dssp             SSCHHHHHTSGGGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSCCCCSC
T ss_pred             CCCHHHHhcCccccCCCHHHHhhcccCCCCCCcCCCccchhhcCCcccc
Confidence            3467889999999999999999999999999999999999999985443

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.28  E-value=3.7e-07  Score=62.46  Aligned_cols=49  Identities=33%  Similarity=0.569  Sum_probs=31.2

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCC-CCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIR-SQTDSSNFDEYPPDQD   88 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~-~~~d~~~fd~~~~~~~   88 (102)
                      ++.+++.|+||++++|+.+.+++++|||.|.+. +..|+++|+.+..+..
T Consensus       252 ~~~~i~~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~d~~~f~~~~~~~~  301 (318)
T 1fot_A          252 GTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDI  301 (318)
T ss_dssp             TTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC----------------CC
T ss_pred             CHHHHhcCccccCCCHHHHHhCCCCCCCCCCcCCCccchhhcCCCCcccc
Confidence            667899999999999999999999999999988 4889999998766543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.12  E-value=1.2e-06  Score=62.13  Aligned_cols=47  Identities=30%  Similarity=0.644  Sum_probs=39.3

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPD   86 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~   86 (102)
                      .+.++..|+||.+++|+.+..+++.|||+|.+.+..|+++|++ |+.+
T Consensus       398 t~~ell~hp~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~~~~  445 (446)
T 4ejn_A          398 DAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQ  445 (446)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC-------
T ss_pred             CHHHHHhCccccCCCHHHHhhCcCCCCccCCCCCccchhhcchhhhcC
Confidence            6678999999999999999999999999999999999999998 6543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.10  E-value=1.8e-06  Score=61.00  Aligned_cols=34  Identities=26%  Similarity=0.768  Sum_probs=32.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++|||+.+..+++.|||+|.+++..++++|+.
T Consensus       321 ff~~i~w~~l~~~~~~pp~~p~~~~~~d~~~fd~  354 (396)
T 4dc2_A          321 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDS  354 (396)
T ss_dssp             TTTTCCHHHHHTTCSCCSCCCCCCSSTTGGGSCH
T ss_pred             cccCCCHHHHHcCCCCCCCcCCCCCccchhhcCh
Confidence            8999999999999999999999999999999984

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=97.94  E-value=3.1e-06  Score=60.01  Aligned_cols=38  Identities=32%  Similarity=0.656  Sum_probs=35.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||++++|+.+..+++.|||+|.+.+..|++||+.+...
T Consensus       332 ~f~~~~w~~~~~~~~~~p~~p~~~~~~d~~~fd~~~~~  369 (410)
T 3v8s_A          332 FFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEED  369 (410)
T ss_dssp             GGCCSSCCSTTGGGSCCSCCCCCSSTTCCTTSCCCCSC
T ss_pred             cccCCCHHHHhhcccCCCCCCcCCCccchhhcCCcccc
Confidence            89999999999999999999999999999999976654

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=97.93  E-value=1.4e-05  Score=55.29  Aligned_cols=38  Identities=34%  Similarity=0.866  Sum_probs=34.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||+++||+.++.+++.|||+|.+.+..++++|+.+...
T Consensus       296 ~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~f~~~~~~  333 (350)
T 1rdq_E          296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE  333 (350)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCC
T ss_pred             CcCCCCHHHHhhccCCCCCCCCCCCccccccccccccc
Confidence            79999999999999999999999999999999866543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=97.90  E-value=2.7e-06  Score=58.05  Aligned_cols=55  Identities=29%  Similarity=0.485  Sum_probs=29.2

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPADD   94 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~~   94 (102)
                      ++.++..|+||++++|+.+..+++.|||.|...+..+.++|+. ++.......|++
T Consensus       270 ~~~e~l~hp~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (327)
T 3a62_A          270 DAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSPDD  325 (327)
T ss_dssp             THHHHHHSGGGSSCCHHHHHTTCSCCSCCCC-------------------------
T ss_pred             CHHHHHcCCcccCCCHHHHhhccCCCCCCCCcCChhhhhhcchhhhccccCCCCCC
Confidence            5678999999999999999999999999999999999999997 655554455543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.89  E-value=2.6e-06  Score=60.45  Aligned_cols=43  Identities=33%  Similarity=0.593  Sum_probs=32.3

Q ss_pred             chhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCC
Q psy17573         39 QAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   83 (102)
Q Consensus        39 ~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~   83 (102)
                      .++.+++.|+||++++|+.|+  ...|||+|.+.+..|++|||.+
T Consensus       320 ~~~~ei~~Hpff~~i~w~~l~--~~~~p~~p~~~~~~d~~~f~~~  362 (412)
T 2vd5_A          320 GGAGDFRTHPFFFGLDWDGLR--DSVPPFTPDFEGATDTCNFDLV  362 (412)
T ss_dssp             TTHHHHHTSGGGTTCCSTTST--TSCCSCCCC-----CCSSCC--
T ss_pred             CCHHHHhcCCCcCCCCHHHHh--hcCCCCCCcCCCcccccccCcc
Confidence            467889999999999999985  4679999999999999999974

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.82  E-value=4.7e-06  Score=59.55  Aligned_cols=43  Identities=33%  Similarity=0.617  Sum_probs=38.4

Q ss_pred             cchhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC
Q psy17573         38 DQAIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   82 (102)
Q Consensus        38 ~~~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~   82 (102)
                      ..++.+++.|+||++++|+.++  +++|||+|.+.+..|++|||.
T Consensus       330 r~~~~eil~Hpff~~i~w~~l~--~~~~p~~P~~~~~~d~~~fd~  372 (437)
T 4aw2_A          330 QNGIEDFKKHPFFSGIDWDNIR--NCEAPYIPEVSSPTDTSNFDV  372 (437)
T ss_dssp             TTTTHHHHTSGGGTTCCTTTGG--GSCCSCCCCCSSTTCCTTSCC
T ss_pred             CCCHHHHhCCCccCCCCHHHHh--hCCCCCCCcCCCccchhhcCC
Confidence            3456789999999999999994  678999999999999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=97.78  E-value=9.6e-06  Score=56.69  Aligned_cols=34  Identities=32%  Similarity=0.773  Sum_probs=24.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++|||+.++.+++.|||+|.+.+..|+++|+.
T Consensus       296 ~f~~~~w~~l~~~~~~pp~~p~~~~~~d~~~f~~  329 (373)
T 2r5t_A          296 FFSLINWDDLINKKITPPFNPNVSGPNDLRHFDP  329 (373)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCSCCC---------
T ss_pred             cccCCCHHHHHhCCCCCCCCCCCCCcchhhhcCc
Confidence            7999999999999999999999999999999984

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=97.76  E-value=1.5e-05  Score=60.22  Aligned_cols=33  Identities=21%  Similarity=0.588  Sum_probs=29.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   33 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd   33 (102)
                      ||++|||+.|+.+++.|||+|.+.+..++++||
T Consensus       452 fF~~idW~~l~~~~~~pP~~P~~~~~~~~~~fD  484 (689)
T 3v5w_A          452 FFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFD  484 (689)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCTTCSSTTBCCC
T ss_pred             cccCCCHHHHHcCCCCcCccCCCCCCCcCCCCC
Confidence            899999999999999999999887777666665

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=97.71  E-value=2.4e-05  Score=54.21  Aligned_cols=34  Identities=41%  Similarity=0.906  Sum_probs=32.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+++||+++..+++.|||+|.+++..++++|+.
T Consensus       283 ~f~~~~w~~l~~~~~~~p~~p~~~~~~~~~~f~~  316 (353)
T 3txo_A          283 FFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDP  316 (353)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCH
T ss_pred             cccCCCHHHHhcCcCCCCccCCCCCcccccccCc
Confidence            8999999999999999999999999999999983

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=97.67  E-value=1.2e-05  Score=55.16  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=27.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      ++.++..|+||++++|++|.+|+++|||+|
T Consensus       275 ~~~eil~Hp~f~~idw~~l~~~~~~pP~~P  304 (304)
T 3ubd_A          275 GVEEIKRHSFFSTIDWNKLYRREIHPPFKP  304 (304)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSSCC
T ss_pred             CHHHHHcCccccCCCHHHHHhCCCCcCcCC
Confidence            356899999999999999999999999988

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=97.65  E-value=9.6e-06  Score=60.74  Aligned_cols=35  Identities=31%  Similarity=0.738  Sum_probs=31.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++|||+.|..+++.|||+|.+.+ .+++||+.+.
T Consensus       600 ff~~i~w~~l~~~~~~pp~~p~~~~-~~~~~f~~~~  634 (674)
T 3pfq_A          600 FFRYIDWEKLERKEIQPPYKPKASG-RNAENFDRFF  634 (674)
T ss_dssp             GGSSCCHHHHTTTCSCCSCCCBCCG-GGHHHHTTTT
T ss_pred             cccCCCHHHHHhCCCCCCCCCcCCC-CchhhcCchh
Confidence            8999999999999999999999988 7888998644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=97.62  E-value=3.8e-05  Score=52.86  Aligned_cols=34  Identities=32%  Similarity=0.852  Sum_probs=32.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+++||+.+..+++.||++|.+.+..++++|+.
T Consensus       263 ~f~~~~~~~~~~~~~~pp~~p~~~~~~d~~~f~~  296 (337)
T 1o6l_A          263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD  296 (337)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCH
T ss_pred             CcCCCCHHHHHhCCCCCCCCCCCCCcchhhcccc
Confidence            7999999999999999999999999999999983

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=97.52  E-value=2.6e-05  Score=54.09  Aligned_cols=33  Identities=33%  Similarity=0.767  Sum_probs=29.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+++||+.+..+++.|||+|.+.+. ++++|+.
T Consensus       279 ~f~~~~w~~l~~~~~~~p~~p~~~~~-~~~~f~~  311 (353)
T 2i0e_A          279 FFRYIDWEKLERKEIQPPYKPKACGR-NAENFDR  311 (353)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCCCC---CHHHH
T ss_pred             cccCCCHHHHHhCCCCCCcCCCCCCc-chhhccc
Confidence            79999999999999999999999888 9999974

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=97.50  E-value=3e-05  Score=53.61  Aligned_cols=34  Identities=44%  Similarity=0.857  Sum_probs=16.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||+++||+.+..+++.|||+|.+.+..++++|+.
T Consensus       272 ~f~~~~w~~l~~~~~~~p~~p~~~~~~d~~~f~~  305 (345)
T 1xjd_A          272 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDK  305 (345)
T ss_dssp             GGTTCCHHHHHTTCSCC-----------------
T ss_pred             cccCCCHHHHhhCCCCCCcCCCCCCcchhhhcch
Confidence            7999999999999999999999999999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=97.48  E-value=4.5e-05  Score=52.00  Aligned_cols=38  Identities=42%  Similarity=0.892  Sum_probs=22.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCccc-CCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIR-SQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~-~~~d~~~fd~~~~~   38 (102)
                      ||++++|+.++.+++.|||+|.+. +..|+++|+.+.+.
T Consensus       261 ~f~~~~~~~~~~~~~~~p~~p~~~~~~~d~~~f~~~~~~  299 (318)
T 1fot_A          261 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEE  299 (318)
T ss_dssp             GGSSCCHHHHHTTCSCCSCCCCC----------------
T ss_pred             cccCCCHHHHHhCCCCCCCCCCcCCCccchhhcCCCCcc
Confidence            899999999999999999999997 47889999876543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=97.42  E-value=7.3e-05  Score=51.52  Aligned_cols=34  Identities=26%  Similarity=0.768  Sum_probs=31.9

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|+.+..+++.|||+|.+.+..++++|+.
T Consensus       278 ~f~~~~w~~~~~~~~~~p~~p~~~~~~~~~~~~~  311 (345)
T 3a8x_A          278 FFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFDS  311 (345)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCCTTTCGGGSCH
T ss_pred             ccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence            8999999999999999999999999999999973

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=97.41  E-value=0.0001  Score=52.29  Aligned_cols=36  Identities=36%  Similarity=0.759  Sum_probs=31.2

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++++|+.++.+++.|||+|.+.+..++++|++..
T Consensus       407 ~f~~~~~~~~~~~~~~pp~~p~~~~~~~~~~~~~~~  442 (446)
T 4ejn_A          407 FFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDEEF  442 (446)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCSCSSTTCCTTC----
T ss_pred             cccCCCHHHHhhCcCCCCccCCCCCccchhhcchhh
Confidence            899999999999999999999999999999998643

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=97.37  E-value=3.5e-05  Score=54.60  Aligned_cols=34  Identities=41%  Similarity=0.927  Sum_probs=24.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYP   36 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~   36 (102)
                      ||++|||+.+.  +..|||+|.+.+..|++||+...
T Consensus       330 ff~~i~w~~l~--~~~~p~~p~~~~~~d~~~f~~~~  363 (412)
T 2vd5_A          330 FFFGLDWDGLR--DSVPPFTPDFEGATDTCNFDLVE  363 (412)
T ss_dssp             GGTTCCSTTST--TSCCSCCCC-----CCSSCC--C
T ss_pred             CcCCCCHHHHh--hcCCCCCCcCCCcccccccCccc
Confidence            89999999995  56799999999999999998643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=97.24  E-value=0.00011  Score=52.38  Aligned_cols=33  Identities=39%  Similarity=0.882  Sum_probs=30.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY   35 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~   35 (102)
                      ||++|||+.+  +++.|||+|.+.+..++++|+..
T Consensus       341 ff~~i~w~~l--~~~~~p~~P~~~~~~d~~~fd~~  373 (437)
T 4aw2_A          341 FFSGIDWDNI--RNCEAPYIPEVSSPTDTSNFDVD  373 (437)
T ss_dssp             GGTTCCTTTG--GGSCCSCCCCCSSTTCCTTSCCC
T ss_pred             ccCCCCHHHH--hhCCCCCCCcCCCccchhhcCCc
Confidence            8999999999  47889999999999999999854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=97.19  E-value=0.00016  Score=53.04  Aligned_cols=43  Identities=23%  Similarity=0.392  Sum_probs=32.7

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCC-----CCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIR-----SQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~-----~~~d~~~fd~   82 (102)
                      ++.+++.|+||++++|..+..+.+.|||+|...     +..|..+|+.
T Consensus       442 ~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P~~~~~~~~~~~d~~~f~~  489 (543)
T 3c4z_A          442 SCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGAFST  489 (543)
T ss_dssp             BSHHHHTSGGGTTCCHHHHHTTCSCCSCCCCSSSCCSCC----CCCC-
T ss_pred             CHHHHHcCccccCCCHHHHHcCCCCCCCCCCccccccCCchhhhhccc
Confidence            457899999999999999999999999999754     4455666654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=97.02  E-value=0.00031  Score=48.35  Aligned_cols=41  Identities=29%  Similarity=0.479  Sum_probs=34.8

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF   80 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~f   80 (102)
                      .+.++..|+||..++|..+..+++.+||.|.+++..|.+||
T Consensus       315 s~~ell~h~~f~~~~~~~l~~~~~~~p~~p~~~~~~d~~~~  355 (355)
T 1vzo_A          315 DADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF  355 (355)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CCC---
T ss_pred             CHHHHHcCcchhcCChhHhhhccCCCCCCCccccccccccC
Confidence            56789999999999999999999999999999999898887

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.94  E-value=0.00028  Score=52.21  Aligned_cols=43  Identities=21%  Similarity=0.273  Sum_probs=30.2

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCC-----CCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIR-----SQTDSSNFDE   82 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~-----~~~d~~~fd~   82 (102)
                      ++.+++.|+||++++|.++..+.++|||+|...     +..|.++|+.
T Consensus       438 sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~~~~~~~~~~d~~~f~~  485 (576)
T 2acx_A          438 SAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFST  485 (576)
T ss_dssp             HHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCCCCC-----------
T ss_pred             CHHHHHhChhhccCCHHHHhcCCCCCCCCCCccccccCCcccHhhccc
Confidence            568899999999999999999999999999754     3445555544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.73  E-value=0.00092  Score=46.89  Aligned_cols=34  Identities=18%  Similarity=0.424  Sum_probs=30.2

Q ss_pred             hhcccCCCCCCCCChHHHhcCCCCCCeeccCCCC
Q psy17573         41 IFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQ   74 (102)
Q Consensus        41 ~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~   74 (102)
                      +.+++.|+||.+++|+.+.++++.|||+|.....
T Consensus       266 ~~~l~~hp~f~~~~w~~~~~~~~~p~~~p~~~~~  299 (384)
T 4fr4_A          266 LSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGRL  299 (384)
T ss_dssp             HHHHHTSGGGTTCCHHHHHTTCSCCCCCCSCCSS
T ss_pred             HHHHHcChhhhcCCHHHHHhCCCCCCCCCCCCCC
Confidence            5678999999999999999999999999986543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.25  E-value=0.0019  Score=43.76  Aligned_cols=34  Identities=41%  Similarity=0.807  Sum_probs=21.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|..+..+++.||++|.+....+.++|+.
T Consensus       279 ~f~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~  312 (327)
T 3a62_A          279 FFRHINWEELLARKVEPPFKPLLQSEEDVSQFDS  312 (327)
T ss_dssp             GGSSCCHHHHHTTCSCCSCCCC------------
T ss_pred             cccCCCHHHHhhccCCCCCCCCcCChhhhhhcch
Confidence            7999999999999999999999988888888874

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.08  E-value=0.0048  Score=43.23  Aligned_cols=32  Identities=22%  Similarity=0.615  Sum_probs=26.1

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF   32 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~f   32 (102)
                      ||+++||+.++.+++.|||+|..........|
T Consensus       274 ~f~~~~w~~~~~~~~~p~~~p~~~~~~~~~~~  305 (384)
T 4fr4_A          274 YMNDINWDAVFQKRLIPGFIPNKGRLNCDPTF  305 (384)
T ss_dssp             GGTTCCHHHHHTTCSCCCCCCSCCSSCCCCCC
T ss_pred             hhhcCCHHHHHhCCCCCCCCCCCCCCCCCCcc
Confidence            79999999999999999999997554433334

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=95.67  E-value=0.0065  Score=44.60  Aligned_cols=24  Identities=33%  Similarity=0.785  Sum_probs=22.5

Q ss_pred             CCCCCChHHHhcCcCCCCccCccc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIR   24 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~   24 (102)
                      ||++++|+.+..+.+.|||+|...
T Consensus       451 ff~~i~w~~l~~~~~~pp~~P~~~  474 (543)
T 3c4z_A          451 LFRDISWRQLEAGMLTPPFVPDSR  474 (543)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCSS
T ss_pred             cccCCCHHHHHcCCCCCCCCCCcc
Confidence            899999999999999999999874

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=94.83  E-value=0.015  Score=43.07  Aligned_cols=24  Identities=29%  Similarity=0.540  Sum_probs=22.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCccc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIR   24 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~   24 (102)
                      ||+++||+.+..+.+.|||+|...
T Consensus       447 fF~~i~w~~l~~~~~~pp~~p~~~  470 (576)
T 2acx_A          447 LFKKLNFKRLGAGMLEPPFKPDPQ  470 (576)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCC
T ss_pred             hhccCCHHHHhcCCCCCCCCCCcc
Confidence            899999999999999999999864

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=92.74  E-value=0.019  Score=39.39  Aligned_cols=23  Identities=30%  Similarity=0.657  Sum_probs=19.0

Q ss_pred             cccCCCCCCCCChHHHhcCCCCCCe
Q psy17573         43 LSFPCRWFDGFNWEGLRNRTLIPPI   67 (102)
Q Consensus        43 ~i~~~~~F~~~dw~~l~~~~~~pp~   67 (102)
                      .++.|+||++++|+.|.+++  ||.
T Consensus       287 ~i~~Hp~F~~idw~~l~~~~--pP~  309 (311)
T 4aw0_A          287 PLKAHPFFESVTWENLHQQT--PPK  309 (311)
T ss_dssp             HHHTSGGGTTCCCTTGGGSC--CCC
T ss_pred             HHHCCCCcCCCCHHHhcCCC--CCC
Confidence            47899999999999998764  554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	6e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-10
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-10
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-08
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-06

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.6 bits (133), Expect = 4e-11
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 48  RWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTG 97
           +WF   +W  +  R +  P +PK +   D+SNFD+Y  ++     ++  G
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVSINEKCG 344

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.8 bits (131), Expect = 7e-11
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQ 39
           WF   +W  +  R +  P +PK +   D+SNFD+Y  ++
Sbjct: 296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 2e-10
 Identities = 18/46 (39%), Positives = 25/46 (54%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
            F   NWE L  + + PP  PK++S  D SNFD+   ++   LSF 
Sbjct: 257 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFA 302

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.0 bits (124), Expect = 6e-10
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP 89
            F   NWE L  + + PP  PK++S  D SNFD+   ++ P
Sbjct: 257 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKP 297

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 5e-10
 Identities = 14/46 (30%), Positives = 27/46 (58%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQAIFLSFP 46
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q+I ++ P
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPP 308

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 5e-10
 Identities = 12/42 (28%), Positives = 22/42 (52%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPP 90
           +F   NW+ +  + L+PP  P++ S+ D+  FD+    Q   
Sbjct: 263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSIT 304

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIR-SQTDSSNFDEYPPDQDPPPADD 94
           WF    WE L +R +  P  P I+  Q D+S FD+YP +        
Sbjct: 259 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDINYGVQG 305

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.8 bits (113), Expect = 2e-08
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIR-SQTDSSNFDEYPPD 38
           WF    WE L +R +  P  P I+  Q D+S FD+YP +
Sbjct: 259 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEE 297

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.4 bits (112), Expect = 3e-08
 Identities = 10/54 (18%), Positives = 21/54 (38%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDPPPADDLTGWDADF 102
           +F   +W+ +  +   PP++P       +  FD    D++      L   D + 
Sbjct: 267 FFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQEL 320

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.0 bits (111), Expect = 4e-08
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 13/62 (20%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEY-------------PPDQAIFLSFPC 47
           +F   +W+ +  +   PP++P       +  FD                 DQ ++ +FP 
Sbjct: 267 FFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPL 326

Query: 48  RW 49
             
Sbjct: 327 TI 328

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-06
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 1   WFDGFNWEGLRNRTLIPPILPKIRSQTD 28
           +F   NW+ L  + +  P  P IR + D
Sbjct: 294 FFQKINWDDLAAKKVPAPFKPVIRDELD 321

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 4e-06
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 49  WFDGFNWEGLRNRTLIPPILPKIRSQTD 76
           +F   NW+ L  + +  P  P IR + D
Sbjct: 294 FFQKINWDDLAAKKVPAPFKPVIRDELD 321

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	98.47
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	98.22
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	98.13
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.98
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.83
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.54
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.52
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	97.46
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.45
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	97.39
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	96.45
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	91.67

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=9.3e-08  Score=64.94  Aligned_cols=50  Identities=26%  Similarity=0.585  Sum_probs=44.6

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPDQDP   89 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~~~~~~~~   89 (102)
                      .+.++..|+||++++|..+.+++++|||+|...+..|++||+++..+...
T Consensus       287 t~~ell~Hp~f~~~~~~~~~~~~~~~p~~p~~~~~~d~s~~~~~~~~~~~  336 (350)
T d1rdqe_         287 GVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR  336 (350)
T ss_dssp             TTHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCCCCC
T ss_pred             cHHHHHcCccccCCCHHHHHhcCCCcCccCCCCCcchhhhcCCCCccccc
Confidence            57789999999999999999999999999999999999999987655543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=1.7e-07  Score=63.35  Aligned_cols=54  Identities=22%  Similarity=0.514  Sum_probs=43.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPPAD   93 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~~~   93 (102)
                      ++.+++.|+||++++|+.+..+++.|||+|.+.+..++++|++ +......++|.
T Consensus       254 ~~~eil~Hp~f~~i~~~~l~~~~~~~p~~P~~~~~~~~~~f~~~~~~~~~~~~~~  308 (337)
T d1o6la_         254 DAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFTAQSITITPP  308 (337)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCHHHHTSCCC----
T ss_pred             cHHHHHcCcccccCCHHHHHhCCCCCCCCCCCCChhhhhhcCchhhhccCCCCCC
Confidence            4678999999999999999999999999999999999999986 44444434443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=3.5e-07  Score=61.31  Aligned_cols=50  Identities=30%  Similarity=0.490  Sum_probs=22.4

Q ss_pred             hcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCCC-CCCCCCCCC
Q psy17573         42 FLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE-YPPDQDPPP   91 (102)
Q Consensus        42 ~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd~-~~~~~~~~~   91 (102)
                      .+++.|+||++++|+.|.++++.||++|.+++..|++||+. +.++...+.
T Consensus       250 ~~l~~hpff~~~~~~~l~~~~~~pp~~p~~~~~~d~~~f~~~~~~~~~~~~  300 (320)
T d1xjda_         250 GDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLS  300 (320)
T ss_dssp             SCGGGSGGGTTCCHHHHHTTCSCC---------------------------
T ss_pred             HHHHhCchhccCCHHHHHhcCCCCCCCCCCCCccchhhcChHhhhCCccCC
Confidence            36889999999999999999999999999999999999987 444443333

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.98  E-value=1.9e-06  Score=57.57  Aligned_cols=49  Identities=33%  Similarity=0.569  Sum_probs=30.5

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCC-CCCCCCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIR-SQTDSSNFDEYPPDQD   88 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~-~~~d~~~fd~~~~~~~   88 (102)
                      ++.+++.|+||++++|+.|.++++++||+|.+. ...|+++|+++.+++.
T Consensus       250 t~~~il~Hp~f~~i~~~~l~~~~~~~p~~p~~~~~~~d~~~f~~~~~~~~  299 (316)
T d1fota_         250 GTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEEDI  299 (316)
T ss_dssp             TTHHHHTSGGGSSCCHHHHHTTCSCCSCCCCC----------------CC
T ss_pred             hHHHHHcCcccccCCHHHHHhCCCCcCCCCCcCCCcchhhhcCCCccccc
Confidence            567899999999999999999999999998754 4568999998666543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=7.2e-06  Score=55.38  Aligned_cols=38  Identities=34%  Similarity=0.866  Sum_probs=34.7

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~~~~~   38 (102)
                      ||+++||..+..+++.|||+|.+....++++|+.+..+
T Consensus       296 ~f~~~~~~~~~~~~~~~p~~p~~~~~~d~s~~~~~~~~  333 (350)
T d1rdqe_         296 WFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE  333 (350)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCCSTTCCTTSCCCCCC
T ss_pred             cccCCCHHHHHhcCCCcCccCCCCCcchhhhcCCCCcc
Confidence            89999999999999999999999999999999876644

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.7e-05  Score=52.85  Aligned_cols=34  Identities=44%  Similarity=0.857  Sum_probs=16.4

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|+++.++++.||++|.+.+..|+++|+.
T Consensus       257 ff~~~~~~~l~~~~~~pp~~p~~~~~~d~~~f~~  290 (320)
T d1xjda_         257 LFREINWEELERKEIDPPFRPKVKSPFDCSNFDK  290 (320)
T ss_dssp             GGTTCCHHHHHTTCSCC-----------------
T ss_pred             hhccCCHHHHHhcCCCCCCCCCCCCccchhhcCh
Confidence            7999999999999999999999999999999974

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.52  E-value=2.1e-05  Score=53.28  Aligned_cols=42  Identities=17%  Similarity=0.373  Sum_probs=30.1

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFD   81 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d~~~fd   81 (102)
                      .+.+++.|+||++++|..+..++++||++|........+.|+
T Consensus       258 ~a~eil~Hp~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~d  299 (364)
T d1omwa3         258 GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFD  299 (364)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCC---------
T ss_pred             CHHHHHcCccccCCCHHHHhcCCCCcCcCCCCCCCCcCCccc
Confidence            367899999999999999999999999999776665555554

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=2.5e-05  Score=51.97  Aligned_cols=37  Identities=24%  Similarity=0.423  Sum_probs=32.9

Q ss_pred             hhhcccCCCCCCCCChHHHhcCCCCCCeeccCCCCCC
Q psy17573         40 AIFLSFPCRWFDGFNWEGLRNRTLIPPILPKIRSQTD   76 (102)
Q Consensus        40 ~~~~i~~~~~F~~~dw~~l~~~~~~pp~~p~~~~~~d   76 (102)
                      .+.++..|+||++++|..+..+++++|++|.+++..|
T Consensus       285 t~~eil~Hpff~~i~~~~l~~~~~~~p~~p~~~~~~~  321 (322)
T d1vzoa_         285 DADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELD  321 (322)
T ss_dssp             THHHHHTSGGGTTCCHHHHHTTCSCCSCCCCCCC-CC
T ss_pred             cHHHHHcCHhhcCCCHHHHHhCCCCcCCCCCCCCCCC
Confidence            4678999999999999999999999999999887765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.45  E-value=3.5e-05  Score=51.20  Aligned_cols=38  Identities=42%  Similarity=0.891  Sum_probs=22.0

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccC-CCCCCCCCCCCCc
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRS-QTDSSNFDEYPPD   38 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~-~~d~~~fd~~~~~   38 (102)
                      ||++|+|++|..+++++|++|.+.. ..++++|+++.++
T Consensus       259 ~f~~i~~~~l~~~~~~~p~~p~~~~~~~d~~~f~~~~~~  297 (316)
T d1fota_         259 WFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEE  297 (316)
T ss_dssp             GGSSCCHHHHHTTCSCCSCCCCC----------------
T ss_pred             ccccCCHHHHHhCCCCcCCCCCcCCCcchhhhcCCCccc
Confidence            8999999999999999999998744 4578899876553

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=5.4e-05  Score=50.75  Aligned_cols=34  Identities=32%  Similarity=0.852  Sum_probs=31.8

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNFDE   34 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~fd~   34 (102)
                      ||++++|+.+..+++.||++|.+....++++|+.
T Consensus       263 ~f~~i~~~~l~~~~~~~p~~P~~~~~~~~~~f~~  296 (337)
T d1o6la_         263 FFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD  296 (337)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCSSTTCCTTSCH
T ss_pred             ccccCCHHHHHhCCCCCCCCCCCCChhhhhhcCc
Confidence            7999999999999999999999999999999874

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.45  E-value=0.00063  Score=45.77  Aligned_cols=32  Identities=19%  Similarity=0.558  Sum_probs=22.6

Q ss_pred             CCCCCChHHHhcCcCCCCccCcccCCCCCCCC
Q psy17573          1 WFDGFNWEGLRNRTLIPPILPKIRSQTDSSNF   32 (102)
Q Consensus         1 fF~~idW~~l~~k~i~pP~~P~~~~~~d~~~f   32 (102)
                      ||++|||..++.+++.||++|........+.|
T Consensus       267 ~f~~i~~~~~~~~~~~~p~~p~~~~~~~~~~~  298 (364)
T d1omwa3         267 FFRSLDWQMVFLQKYPPPLIPPRGEVNAADAF  298 (364)
T ss_dssp             GGTTCCHHHHHTTCSCCSCCCCCC--------
T ss_pred             cccCCCHHHHhcCCCCcCcCCCCCCCCcCCcc
Confidence            89999999999999999999977655544443

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.67  E-value=0.016  Score=37.46  Aligned_cols=25  Identities=28%  Similarity=0.618  Sum_probs=19.9

Q ss_pred             cccCCCCCCCCChHHHhcCCCCCCeec
Q psy17573         43 LSFPCRWFDGFNWEGLRNRTLIPPILP   69 (102)
Q Consensus        43 ~i~~~~~F~~~dw~~l~~~~~~pp~~p   69 (102)
                      .++.|+||++++|++|+++  +||-+|
T Consensus       263 ~i~~Hpff~~i~w~~l~~~--~pP~l~  287 (288)
T d1uu3a_         263 PLKAHPFFESVTWENLHQQ--TPPKLT  287 (288)
T ss_dssp             HHHTSGGGTTCCCTTGGGS--CCCCCC
T ss_pred             HHHcCCccCCCCHHHhhcC--CCCCCC
Confidence            3688999999999999876  366444