Psyllid ID: psy17613

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
Protein Sequence
TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAVAPGVAVKEEKEL
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHcccccccccccccccccccHHccHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccEEcHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHcHHHHHHHHHcHHHHHHHHHHHHccccccccccccccccccccccHHHHEHEEHccccEEccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEccHHHEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccc
Coil and Loop (DISEMBL)
TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEfdtqlsncavygTMCVGaeasqqyvtkrylpsfscpvstIMIRRffnnypllsncavYGTMCVGAEASQQYVTkrylnpttppepidtaaLGRYAIlgtcinpnILYFWYKWLDKAFTGKSAQIVVKKVLIdqfcmtpplyAIFYTSMSLMEGKDDIFAELREKFLPtfqtscifwlpaqtinffflppaaRVIFVGTCSFVWINILCWLkrsdlnaesslavapgvavkeekel
Flexible Loop (DISEMBL)
TLKQRRVQVVTalqelntsvTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNaesslavapgvavkeekel
Low Complexity Region (SEG)
TLKQRRVQVVTALQElntsvtvvlnllsnDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAVAPGVAVKEEKEL
Disordered region (IsUnstruct)
******VQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL********************
Disordered Region (DISOPRED)
***QR**QVVTALQELNTSVTVVLNLLSNDA*****************LT*EFDTQLSNCAVYG***************RYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRY***TTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINIL****************************
Disordered Region (DISEMBL)
TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAVA***********
Disordered Region (DISPRO)
TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSD*********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQLSNCAVYGTMCVGAEASQQYVTKRYLPSFSCPVSTIMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAVAPGVAVKEEKEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	287	2.2.26 [Sep-21-2011]
Q68F62	203	Mpv17-like protein OS=Xen	N/A	N/A	0.630	0.891	0.333	7e-32
Q6DGV7	199	Mpv17-like protein 2 OS=D	no	N/A	0.574	0.829	0.343	8e-21
Q2KIK2	196	Mpv17-like protein OS=Bos	yes	N/A	0.550	0.806	0.305	1e-20
Q99MS3	194	Mpv17-like protein OS=Mus	yes	N/A	0.550	0.814	0.311	2e-20
Q6DIY8	222	Mpv17-like protein 2 OS=X	no	N/A	0.609	0.788	0.306	1e-19
Q2QL34	196	Mpv17-like protein OS=Hom	yes	N/A	0.571	0.836	0.289	2e-19
Q54FR4	185	PXMP2/4 family protein 4	yes	N/A	0.386	0.6	0.318	6e-14
A5D787	218	Mpv17-like protein 2 OS=B	no	N/A	0.397	0.522	0.341	4e-12
Q4P9K6	199	Protein SYM1 OS=Ustilago	N/A	N/A	0.560	0.809	0.292	2e-11
Q8VIK2	200	Mpv17-like protein 2 OS=M	no	N/A	0.543	0.78	0.277	6e-11

>sp|Q68F62|MP17L_XENLA Mpv17-like protein OS=Xenopus laevis GN=mpv17l PE=2 SV=1

 Score =  137 bits (346), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 108/189 (57%), Gaps = 8/189 (4%)

Query: 96  RFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINP 155
           +F   +P L+N  +YG++   A+  QQ ++K      +P EPID     +  ++G C + 
Sbjct: 6   QFTKRHPWLTNVTIYGSLFASADIVQQKLSK------SPTEPIDFKQTAKVGLVGFCFHA 59

Query: 156 NILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELRE 215
           N  +FW +++++ F G +   V++KV  DQ    P   + FYT +SL++G+ D+F  L+E
Sbjct: 60  NFNFFWLRFIERTFPGSAPLNVIRKVACDQLMAAPITISAFYTGLSLLDGERDVFKNLKE 119

Query: 216 KFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESS--L 273
           KF PT++T  + W   QTINF  +PP  R  ++G C+F+W   LC+++  D+N  ++  L
Sbjct: 120 KFWPTYKTGVMCWTVFQTINFSVIPPFVRTAYIGVCAFLWTTFLCYIRNRDINEVTTRLL 179

Query: 274 AVAPGVAVK 282
              P +  K
Sbjct: 180 HAVPNIRGK 188

Participates in reactive oxygen species metablism.
Xenopus laevis (taxid: 8355)

>sp|Q6DGV7|M17L2_DANRE Mpv17-like protein 2 OS=Danio rerio GN=mpv17l2 PE=2 SV=1

 Score =  101 bits (251), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 84/172 (48%), Gaps = 7/172 (4%)

Query: 97  FFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPN 156
           F   + +++N    G M    +  QQ    R     TP    D +  G    +G  + P 
Sbjct: 21  FRGRFLIVTNTVSCGGMLAAGDLIQQTREIR----RTPGRTRDWSRTGCMFAVGCSMGP- 75

Query: 157 ILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFA--ELR 214
            +++WY+WLDK F G     V KKVL+DQ   +P L A ++  M +MEG   I A  E R
Sbjct: 76  FMHYWYQWLDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGMMEGHTFIEAQQEFR 135

Query: 215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSD 266
           +KF   ++     W  AQ INF+FLPP  RV++V   +  W   L +LK  D
Sbjct: 136 DKFWEFYKADWCVWPAAQMINFYFLPPKFRVLYVNIVTLGWDTYLSYLKHRD 187

Danio rerio (taxid: 7955)

>sp|Q2KIK2|MP17L_BOVIN Mpv17-like protein OS=Bos taurus GN=MPV17L PE=2 SV=1

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 9/167 (5%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           + R    YP  +N  +Y     G +A QQ +            P D       A +    
Sbjct: 8   LTRAAGRYPWPANVLLYAGFFSGGDALQQVLRG---------GPADWQHTRHVATVAVAF 58

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
           + N+ Y W   L++A  G++ + ++ KVL DQ    P   + FY  MS+++GKDDIF ++
Sbjct: 59  HANLNYVWLNLLERALPGRAPRTILAKVLCDQALGGPVYVSTFYAGMSILQGKDDIFLDM 118

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILC 260
           R+KF  T+++  ++W   Q INF  +P   R  + G C F+W   LC
Sbjct: 119 RQKFWNTYKSGLMYWPFVQLINFSLIPIRWRTAYTGLCGFLWATFLC 165

Participates in reactive oxygen species metablism by up-or down-regulation of the genes of antioxidant enzymes.

Bos taurus (taxid: 9913)

>sp|Q99MS3|MP17L_MOUSE Mpv17-like protein OS=Mus musculus GN=Mpv17l PE=1 SV=2

 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 9/167 (5%)

Query: 99  NNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNIL 158
             YP  +N  +Y  +    +A QQ +            P D     R A L    + N  
Sbjct: 13  RRYPWPTNVLLYAGLFSAGDALQQRLRG---------GPADWRQTRRVATLAVTFHGNFN 63

Query: 159 YFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFL 218
           Y W + L++A  G++ + V+ KVL DQ    P   + FY  MS+++GKDDIF +L++KF 
Sbjct: 64  YVWLRLLERALPGRAPRTVLAKVLCDQTVGGPIALSAFYVGMSVLQGKDDIFLDLKQKFW 123

Query: 219 PTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRS 265
            T+++  ++W   Q  NF  +P   R  + G C+F+W   LC+ ++S
Sbjct: 124 NTYKSGLMYWPFVQLTNFSLVPVHWRTAYTGLCAFLWATFLCFSQQS 170

Isoform 1 and isoform 3 participate in reactive oxygen species metablism by up- or down-regulation of the genes of antioxidant enzymes.

Mus musculus (taxid: 10090)

>sp|Q6DIY8|M17L2_XENTR Mpv17-like protein 2 OS=Xenopus tropicalis GN=mpv17l2 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 8/183 (4%)

Query: 97  FFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPN 156
           F   + +++N    G +    ++ QQ    R      P    D    GR   +G  + P 
Sbjct: 20  FKGRFLIVTNTVSCGLLLGIGDSIQQSREVR----RDPERKRDWLRTGRMFAIGCSMGP- 74

Query: 157 ILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGK--DDIFAELR 214
           +++FWY WLD++F G+   +V++KVLIDQ   +P L   ++  M  MEG+  +  + E R
Sbjct: 75  LMHFWYSWLDRSFPGRGITVVMRKVLIDQLVASPVLGLWYFLGMGSMEGQKLEKSWQEFR 134

Query: 215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLK-RSDLNAESSL 273
           EKF   ++     W  AQ INF+FL P  RVI++   +  W   L +LK R +   E+++
Sbjct: 135 EKFWEFYKADWTVWPAAQMINFYFLSPKYRVIYINVITVGWDTYLSYLKHRKEECVENTM 194

Query: 274 AVA 276
             +
Sbjct: 195 GTS 197

Xenopus tropicalis (taxid: 8364)

>sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           + R    +P  +N  +YG++    +A QQ +  R  N              R A L    
Sbjct: 8   LSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREANWRQTR---------RVATLVVTF 58

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
           + N  Y W + L++A  G++   ++ K+L DQ    P   + FY  MS+++GKDDIF +L
Sbjct: 59  HANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDL 118

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSD 266
           ++KF  T+ +  ++W   Q  NF  +P   R  + G C F+W   +C+ ++S 
Sbjct: 119 KQKFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQSG 171

Isoform 1 participates in reactive oxygen species metablism by up- or down-regulation of the genes of antioxidant enzymes.

Homo sapiens (taxid: 9606)

>sp|Q54FR4|PX24D_DICDI PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1

 Score = 78.2 bits (191), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 63/113 (55%), Gaps = 2/113 (1%)

Query: 145 RYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLME 204
           R A+ G  +   + ++W+K+LDK F  KS +    K+ IDQ   +P    +F++ M ++E
Sbjct: 62  RMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILE 121

Query: 205 G--KDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVW 255
           G  KDDI  +L++ +L T+ + C+ W     +NF ++    RV F+  C+  W
Sbjct: 122 GKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGW 174

Dictyostelium discoideum (taxid: 44689)

>sp|A5D787|M17L2_BOVIN Mpv17-like protein 2 OS=Bos taurus GN=MPV17L2 PE=2 SV=1

 Score = 72.4 bits (176), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 6/120 (5%)

Query: 149 LGTCINPNILYFWYKWLDKAFTGKS---AQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEG 205
           +G  + P  L++WY WLD+ F          V+KKVLIDQ   +P L   ++  +  +EG
Sbjct: 68  VGCSMGP-FLHYWYLWLDRLFPASGFPGLPNVLKKVLIDQLVASPMLGVWYFLGLGCLEG 126

Query: 206 K--DDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLK 263
           +  D    ELR+KF   ++     W  AQ +NF F+PP  RV ++   +  W   L +LK
Sbjct: 127 QTLDKSCQELRDKFWEFYKADWCVWPAAQLVNFLFVPPQFRVTYINGLTLGWDTYLSYLK 186

Bos taurus (taxid: 9913)

>sp|Q4P9K6|SYM1_USTMA Protein SYM1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SYM1 PE=3 SV=1

 Score = 69.7 bits (169), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 17/178 (9%)

Query: 107 CAVYGTM-CVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWY-KW 164
           C   G +   G   +QQ V KR           D A   R ++ G C+   +   W+ + 
Sbjct: 19  CLTGGVLFATGDTIAQQLVEKR-------GSRHDLARTFRLSLYGGCVFSPLASIWFGRV 71

Query: 165 LDKA-FTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGK--DDIFAELREKFLPTF 221
           L++  F+ K+A I  K V +DQ   +P   A+F+ + ++MEG   D    ++   + PT 
Sbjct: 72  LERVRFSSKAANIATK-VALDQAIASPAFVALFFGATTIMEGGSPDQAKNKIIHNWWPTL 130

Query: 222 QTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAVAPGV 279
           +T+   W+P QT+N   +PP+ R++FV   S  W N    +K +   A S  AV P +
Sbjct: 131 KTAWGLWIPVQTLNMALVPPSQRLLFVNVVSIFW-NTFLSIKSA---AASDHAVKPNL 184

May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

>sp|Q8VIK2|M17L2_MOUSE Mpv17-like protein 2 OS=Mus musculus GN=Mpv17l2 PE=1 SV=1

 Score = 68.6 bits (166), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 10/166 (6%)

Query: 103 LLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYFWY 162
           LL+N    G +    + ++Q    R      P +            +G  + P  L+FWY
Sbjct: 26  LLTNTLGCGVLMAAGDGARQVWEVR----ARPGQRFSARRSASMFAVGCSMGP-FLHFWY 80

Query: 163 KWLDKAFTG---KSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGK--DDIFAELREKF 217
            WLD+       +S   V+KKVL+DQ   +P L   ++  +  +EG+  ++   ELR KF
Sbjct: 81  LWLDRLLPASGLRSLPSVMKKVLVDQTVASPILGVWYFLGLGSLEGQTLEESCQELRAKF 140

Query: 218 LPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLK 263
              ++     W  AQ +NF F+P   RV ++   +  W   L +LK
Sbjct: 141 WDFYKADWCVWPAAQLVNFLFIPSHFRVTYINGLTLGWDTYLSYLK 186

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
242247229	187	MPV17 mitochondrial membrane protein-lik	0.616	0.946	0.677	1e-71
195590443	205	GD12563 [Drosophila simulans] gi|1941969	0.606	0.848	0.545	2e-56
161083929	204	CG12355, isoform B [Drosophila melanogas	0.606	0.852	0.545	6e-56
195478164	204	GE22849 [Drosophila yakuba] gi|195495168	0.606	0.852	0.540	1e-55
157107490	206	hypothetical protein AaeL_AAEL000644 [Ae	0.634	0.883	0.532	1e-55
194872764	204	GG13550 [Drosophila erecta] gi|190654861	0.606	0.852	0.534	2e-54
195162728	199	GL25660 [Drosophila persimilis] gi|19846	0.602	0.869	0.549	6e-54
158300166	183	AGAP012390-PA [Anopheles gambiae str. PE	0.592	0.928	0.569	1e-53
195378932	197	GJ11459 [Drosophila virilis] gi|19415539	0.620	0.903	0.516	6e-52
195126533	200	GI12229 [Drosophila mojavensis] gi|19391	0.602	0.865	0.531	2e-50

>gi|242247229|ref|NP_001156046.1| MPV17 mitochondrial membrane protein-like [Acyrthosiphon pisum] gi|239787933|dbj|BAH70668.1| ACYPI000120 [Acyrthosiphon pisum]

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 120/177 (67%), Positives = 147/177 (83%)

Query: 93  MIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTC 152
           +++  F  YP+++N  VYGTMCVGAE SQQ +TKR LN T P EPIDT  LGRYAI+GT 
Sbjct: 7   VVKETFRKYPMIANSTVYGTMCVGAEFSQQILTKRILNKTEPQEPIDTEVLGRYAIVGTL 66

Query: 153 INPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAE 212
           I+PNILYFWYKWLDKAF G + +I+VKK+LIDQF MTPP Y +F+ +MSL+EGK ++F E
Sbjct: 67  ISPNILYFWYKWLDKAFVGTAPKIIVKKLLIDQFIMTPPFYVVFFVTMSLLEGKKNLFEE 126

Query: 213 LREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNA 269
            R+KF+PTF+TSC+FWLPAQ INF  +PPAARVI+VGTCSFVWIN+LCW+KR D NA
Sbjct: 127 CRQKFIPTFKTSCVFWLPAQAINFMLVPPAARVIYVGTCSFVWINMLCWIKRHDYNA 183

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195590443|ref|XP_002084955.1| GD12563 [Drosophila simulans] gi|194196964|gb|EDX10540.1| GD12563 [Drosophila simulans]

 Score =  225 bits (573), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 127/174 (72%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           +R  F+ YP ++N A+YG++ VGAE SQQ+ +KR+L   + PE ID A +GRYA++GT +
Sbjct: 9   VRNLFHRYPFVTNSAIYGSLYVGAEYSQQFASKRWLATASKPEDIDYATIGRYAVMGTAV 68

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
               LY WYKWLD+AF G +  I+VKK+++DQF +TP L  +FY  MS+MEG +DIF EL
Sbjct: 69  YAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSEDIFLEL 128

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           REKF+PTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW KR  L
Sbjct: 129 REKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSL 182

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|161083929|ref|NP_001097610.1| CG12355, isoform B [Drosophila melanogaster] gi|442632488|ref|NP_001261875.1| CG12355, isoform E [Drosophila melanogaster] gi|158028545|gb|ABW08543.1| CG12355, isoform B [Drosophila melanogaster] gi|440215820|gb|AGB94568.1| CG12355, isoform E [Drosophila melanogaster]

 Score =  223 bits (569), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 95/174 (54%), Positives = 126/174 (72%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           +R  F+ YP ++N A+YG++ VGAE SQQ+ +KR+L   + PE ID A +GRYA++GT +
Sbjct: 8   VRNLFHRYPFVTNSAIYGSLYVGAEYSQQFASKRWLATASKPEDIDYATIGRYAVMGTAV 67

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
               LY WYKWLD+AF G +  I+VKK+++DQF +TP L  +FY  MS+MEG  DIF EL
Sbjct: 68  YAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSADIFLEL 127

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           REKF+PTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW KR  L
Sbjct: 128 REKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSL 181

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195478164|ref|XP_002086456.1| GE22849 [Drosophila yakuba] gi|195495168|ref|XP_002095151.1| GE19851 [Drosophila yakuba] gi|194181252|gb|EDW94863.1| GE19851 [Drosophila yakuba] gi|194186246|gb|EDW99857.1| GE22849 [Drosophila yakuba]

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 94/174 (54%), Positives = 127/174 (72%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           +R  F+ YP ++N A+YG++ VGAE SQQ+ +KR+L+  +  E ID A +GRYA++GT +
Sbjct: 8   VRTLFHRYPFVTNSAIYGSLYVGAEYSQQFASKRWLSTASEREDIDYATIGRYAVMGTAV 67

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
               LY WYKWLD+AF G +  I+VKK+++DQF +TP L  +FY  MS+MEG +DIF EL
Sbjct: 68  YAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSEDIFLEL 127

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           REKF+PTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW KR  L
Sbjct: 128 REKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSL 181

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157107490|ref|XP_001649804.1| hypothetical protein AaeL_AAEL000644 [Aedes aegypti] gi|108884090|gb|EAT48315.1| AAEL000644-PA [Aedes aegypti]

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 98/184 (53%), Positives = 134/184 (72%), Gaps = 2/184 (1%)

Query: 96  RFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINP 155
           +FFN +PL  N  VYG++ VGAE SQQ +T+++L    PP+ ID   LGRYAI+GT +  
Sbjct: 10  KFFNKHPLAGNGLVYGSLYVGAEFSQQTITRKFL--MEPPQDIDKPTLGRYAIMGTFVYS 67

Query: 156 NILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELRE 215
            ILY WYKWLDK F G + +I+V+K+L+DQF +TPPL  IF+T MSLME + +I  E ++
Sbjct: 68  PILYNWYKWLDKTFPGTAKRIIVRKLLLDQFILTPPLLVIFFTGMSLMERQSNILEECKQ 127

Query: 216 KFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESSLAV 275
           KFLPTF  SC+FW+PAQT+NF  +PP  RV++VG+C+F W+NILCW+KR  +   +S + 
Sbjct: 128 KFLPTFARSCLFWMPAQTLNFLLVPPKFRVVYVGSCAFAWVNILCWVKRQKMTTPTSASS 187

Query: 276 APGV 279
           A  V
Sbjct: 188 ASAV 191

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194872764|ref|XP_001973078.1| GG13550 [Drosophila erecta] gi|190654861|gb|EDV52104.1| GG13550 [Drosophila erecta]

 Score =  218 bits (556), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 93/174 (53%), Positives = 124/174 (71%)

Query: 94  IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
           +R  F  YP ++N A+YG++ VGAE SQQ+ +KR+L   +  E ID A +GRYA++GT +
Sbjct: 8   VRTLFRRYPFVTNSAIYGSLYVGAEYSQQFASKRWLATASEQEDIDYATIGRYAVMGTAV 67

Query: 154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
               LY WYKWLD+AF G +  I+VKK+++DQF +TP L  +FY  MS+MEG +DI  EL
Sbjct: 68  YAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSEDISLEL 127

Query: 214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           REKF+PTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW KR  L
Sbjct: 128 REKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSL 181

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195162728|ref|XP_002022206.1| GL25660 [Drosophila persimilis] gi|198464276|ref|XP_002134743.1| GA23640 [Drosophila pseudoobscura pseudoobscura] gi|194104167|gb|EDW26210.1| GL25660 [Drosophila persimilis] gi|198149647|gb|EDY73370.1| GA23640 [Drosophila pseudoobscura pseudoobscura]

 Score =  216 bits (551), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 95/173 (54%), Positives = 123/173 (71%)

Query: 95  RRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCIN 154
           R  F  YP ++N A+YG++ VGAE SQQ ++KR+L P    E ID A +GRYA++GT + 
Sbjct: 9   RGIFRRYPFVTNSAIYGSLYVGAEYSQQVLSKRWLAPAAEREDIDYATIGRYAVMGTAVY 68

Query: 155 PNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELR 214
              LY WYKWLD+ F G +  I+V+K+++DQF +TP L  IFY  MS+MEG DDI  ELR
Sbjct: 69  APTLYAWYKWLDRTFPGTTKTIIVRKLVLDQFILTPYLLTIFYAGMSIMEGCDDILLELR 128

Query: 215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           EKFLPTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW+KR  L
Sbjct: 129 EKFLPTFVRSCIFWLPAQVLNFSLVAPRFRVIYMGVCGLIWVNILCWIKRQSL 181

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158300166|ref|XP_320168.4| AGAP012390-PA [Anopheles gambiae str. PEST] gi|157013026|gb|EAA00178.4| AGAP012390-PA [Anopheles gambiae str. PEST]

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 98/172 (56%), Positives = 126/172 (73%), Gaps = 2/172 (1%)

Query: 96  RFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINP 155
           RFF  +PL  N  VYGT+ VGAE SQQ +T++ L  T PP+ ID   L RYA++GT I  
Sbjct: 10  RFFTKHPLAGNGLVYGTLYVGAEFSQQTITRKLL--TDPPQDIDRPTLARYAVMGTFIYS 67

Query: 156 NILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELRE 215
            ILY WYKWLDK F G + +I+VKK+L+DQF +TPPL  IF+T MSLME +  I  E R+
Sbjct: 68  PILYNWYKWLDKTFPGTAKRIIVKKLLLDQFILTPPLLVIFFTGMSLMERQSSITEECRQ 127

Query: 216 KFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           KFLPTF  SC+FW+PAQT+NF  +PP  RV++VG+C+F W+NILCW+KR  +
Sbjct: 128 KFLPTFARSCLFWMPAQTLNFVLVPPKFRVVYVGSCAFAWVNILCWVKRQKM 179

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195378932|ref|XP_002048235.1| GJ11459 [Drosophila virilis] gi|194155393|gb|EDW70577.1| GJ11459 [Drosophila virilis]

 Score =  210 bits (534), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 92/178 (51%), Positives = 123/178 (69%)

Query: 95  RRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCIN 154
           R  F  +P ++N A+YG++ VGAE +QQYV+KR+L      E ID A +GRYA++GT I 
Sbjct: 9   RGLFRRHPFVTNSAIYGSLYVGAEFTQQYVSKRWLARPEEREDIDYATVGRYAVMGTAIY 68

Query: 155 PNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELR 214
              LY WYKWLD  F G     ++KK+L+DQF +TP    +FYT M+LMEG +D F ELR
Sbjct: 69  APSLYAWYKWLDGTFPGTMKTTILKKLLLDQFILTPYCLTLFYTGMALMEGSEDTFEELR 128

Query: 215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLNAESS 272
            KFLPTF  SC FWLPAQ +NF F+ P  R+I++G C  +W+NILCW+KR  L+ E++
Sbjct: 129 AKFLPTFIRSCAFWLPAQALNFMFIAPRFRIIYMGVCGMIWVNILCWIKRQSLSTETA 186

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195126533|ref|XP_002007725.1| GI12229 [Drosophila mojavensis] gi|193919334|gb|EDW18201.1| GI12229 [Drosophila mojavensis]

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/173 (53%), Positives = 122/173 (70%)

Query: 95  RRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCIN 154
           R  F  +P ++N A+YG++ V AE SQQYV+KR+L      E ID A +GRYA++GT + 
Sbjct: 9   RSAFKRHPFVTNSAIYGSLYVAAEFSQQYVSKRWLAQPEQREDIDYATVGRYAVMGTTLY 68

Query: 155 PNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELR 214
              LY WYKWLD  F G     ++KK+++DQF +TP    IFYT MSLMEG +D FAELR
Sbjct: 69  APSLYAWYKWLDGTFPGTLKSTIIKKLVLDQFVLTPYCLTIFYTGMSLMEGAEDPFAELR 128

Query: 215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
           EKF+PTF  SCIFWLPAQ +NF F+ P  R+I++G C  +W+NILC++KR +L
Sbjct: 129 EKFVPTFFRSCIFWLPAQALNFMFIAPRFRIIYMGICGMIWVNILCYIKRQNL 181

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	287
FB|FBgn0040805	204	CG12355 [Drosophila melanogast	0.606	0.852	0.545	5.5e-54
RGD|2324483	194	Mpv17l "MPV17 mitochondrial me	0.581	0.860	0.327	3e-21
ZFIN|ZDB-GENE-040718-306	199	mpv17l2 "MPV17 mitochondrial m	0.574	0.829	0.343	3.9e-21
ZFIN|ZDB-GENE-100922-282	242	si:ch211-120k19.1 "si:ch211-12	0.459	0.545	0.343	4.9e-21
UNIPROTKB|G5E6R0	196	MPV17L "Mpv17-like protein" [B	0.554	0.811	0.303	2.1e-20
UNIPROTKB|Q2KIK2	196	MPV17L "Mpv17-like protein" [B	0.554	0.811	0.303	2.1e-20
MGI|MGI:2135951	194	Mpv17l "Mpv17 transgene, kidne	0.543	0.804	0.315	4.4e-20
UNIPROTKB|Q2QL34	196	MPV17L "Mpv17-like protein" [H	0.567	0.831	0.290	1.2e-19
WB|WBGene00022744	180	ZK470.1 [Caenorhabditis elegan	0.606	0.966	0.315	1.4e-16
FB|FBgn0052263	206	CG32263 [Drosophila melanogast	0.557	0.776	0.343	2.9e-16

FB|FBgn0040805 CG12355 [Drosophila melanogaster (taxid:7227)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 95/174 (54%), Positives = 126/174 (72%)

Query:    94 IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
             +R  F+ YP ++N A+YG++ VGAE SQQ+ +KR+L   + PE ID A +GRYA++GT +
Sbjct:     8 VRNLFHRYPFVTNSAIYGSLYVGAEYSQQFASKRWLATASKPEDIDYATIGRYAVMGTAV 67

Query:   154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
                 LY WYKWLD+AF G +  I+VKK+++DQF +TP L  +FY  MS+MEG  DIF EL
Sbjct:    68 YAPTLYLWYKWLDRAFPGTTKVIIVKKLVLDQFVLTPYLLTVFYAGMSIMEGSADIFLEL 127

Query:   214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDL 267
             REKF+PTF  SCIFWLPAQ +NF  + P  RVI++G C  +W+NILCW KR  L
Sbjct:   128 REKFVPTFMRSCIFWLPAQALNFSLVAPRFRVIYMGICGLIWVNILCWTKRQSL 181

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISS

RGD|2324483 Mpv17l "MPV17 mitochondrial membrane protein-like" [Rattus norvegicus (taxid:10116)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 58/177 (32%), Positives = 87/177 (49%)

Query:    96 RFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINP 155
             R    YP  +N  +Y  +    +A QQ +            P D     R A L    + 
Sbjct:    10 RAARRYPWPTNVLLYAGLFSAGDALQQRLRGG---------PADWRQTRRVATLALTFHG 60

Query:   156 NILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELRE 215
             N  Y W + L++A  G++ + V+ KVL DQ    P   + FY  MS+++GKDDIF +LR+
Sbjct:    61 NFNYMWLRLLERALPGRAPRTVLAKVLCDQTVGGPVALSAFYVGMSILQGKDDIFLDLRQ 120

Query:   216 KFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRS-DLNAES 271
             KF  T++T  ++W   Q  NF  +P   R  + G C F+W   LC+ ++S D   ES
Sbjct:   121 KFWNTYKTGLMYWPFVQLTNFSLVPVNWRTAYTGLCGFLWATFLCFSQQSGDGTVES 177

GO:0005102 "receptor binding" evidence=ISO

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0005777 "peroxisome" evidence=ISO

GO:0010730 "negative regulation of hydrogen peroxide biosynthetic process" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=ISO

GO:1901029 "negative regulation of mitochondrial outer membrane permeabilization" evidence=ISO

ZFIN|ZDB-GENE-040718-306 mpv17l2 "MPV17 mitochondrial membrane protein-like 2" [Danio rerio (taxid:7955)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 59/172 (34%), Positives = 85/172 (49%)

Query:    97 FFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPN 156
             F   + +++N    G M    +  QQ  T+      TP    D +  G    +G  + P 
Sbjct:    21 FRGRFLIVTNTVSCGGMLAAGDLIQQ--TREIRR--TPGRTRDWSRTGCMFAVGCSMGP- 75

Query:   157 ILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFA--ELR 214
              +++WY+WLDK F G     V KKVL+DQ   +P L A ++  M +MEG   I A  E R
Sbjct:    76 FMHYWYQWLDKYFIGNGINNVCKKVLVDQLVASPTLGAWYFLGMGMMEGHTFIEAQQEFR 135

Query:   215 EKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSD 266
             +KF   ++     W  AQ INF+FLPP  RV++V   +  W   L +LK  D
Sbjct:   136 DKFWEFYKADWCVWPAAQMINFYFLPPKFRVLYVNIVTLGWDTYLSYLKHRD 187

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-100922-282 si:ch211-120k19.1 "si:ch211-120k19.1" [Danio rerio (taxid:7955)]

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 46/134 (34%), Positives = 74/134 (55%)

Query:   138 IDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFY 197
             ID +   R A++G C + N  Y W + L++ F G   + V  KV++DQ    P   + FY
Sbjct:   109 IDWSQTARVALVGFCFHANFNYHWLRGLERMFPGGGTKRVSLKVILDQLIAAPMTISAFY 168

Query:   198 TSMSLMEGKDDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWIN 257
               +S +EG +D F + + KF  +++T  ++W   Q +NF  +PPAAR +FVG  +  W  
Sbjct:   169 IGLSTLEGAEDPFEDWKNKFWTSYKTGVVYWSTMQAVNFSLIPPAARTVFVGGVALGWTI 228

Query:   258 ILCWLK--RSDLNA 269
              LC  K  +SD+ +
Sbjct:   229 FLCHFKQQKSDVRS 242

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G5E6R0 MPV17L "Mpv17-like protein" [Bos taurus (taxid:9913)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 51/168 (30%), Positives = 82/168 (48%)

Query:    94 IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
             + R    YP  +N  +Y     G +A QQ +            P D       A +    
Sbjct:     8 LTRAAGRYPWPANVLLYAGFFSGGDALQQVLRGG---------PADWQHTRHVATVAVAF 58

Query:   154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
             + N+ Y W   L++A  G++ + ++ KVL DQ    P   + FY  MS+++GKDDIF ++
Sbjct:    59 HANLNYVWLNLLERALPGRAPRTILAKVLCDQALGGPVYVSTFYAGMSILQGKDDIFLDM 118

Query:   214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCW 261
             R+KF  T+++  ++W   Q INF  +P   R  + G C F+W   LC+
Sbjct:   119 RQKFWNTYKSGLMYWPFVQLINFSLIPIRWRTAYTGLCGFLWATFLCF 166

GO:0005739 "mitochondrion" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q2KIK2 MPV17L "Mpv17-like protein" [Bos taurus (taxid:9913)]

 Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
 Identities = 51/168 (30%), Positives = 82/168 (48%)

Query:    94 IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
             + R    YP  +N  +Y     G +A QQ +            P D       A +    
Sbjct:     8 LTRAAGRYPWPANVLLYAGFFSGGDALQQVLRGG---------PADWQHTRHVATVAVAF 58

Query:   154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
             + N+ Y W   L++A  G++ + ++ KVL DQ    P   + FY  MS+++GKDDIF ++
Sbjct:    59 HANLNYVWLNLLERALPGRAPRTILAKVLCDQALGGPVYVSTFYAGMSILQGKDDIFLDM 118

Query:   214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCW 261
             R+KF  T+++  ++W   Q INF  +P   R  + G C F+W   LC+
Sbjct:   119 RQKFWNTYKSGLMYWPFVQLINFSLIPIRWRTAYTGLCGFLWATFLCF 166

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2135951 Mpv17l "Mpv17 transgene, kidney disease mutant-like" [Mus musculus (taxid:10090)]

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 52/165 (31%), Positives = 84/165 (50%)

Query:   101 YPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCINPNILYF 160
             YP  +N  +Y  +    +A QQ +            P D     R A L    + N  Y 
Sbjct:    15 YPWPTNVLLYAGLFSAGDALQQRLRGG---------PADWRQTRRVATLAVTFHGNFNYV 65

Query:   161 WYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAELREKFLPT 220
             W + L++A  G++ + V+ KVL DQ    P   + FY  MS+++GKDDIF +L++KF  T
Sbjct:    66 WLRLLERALPGRAPRTVLAKVLCDQTVGGPIALSAFYVGMSVLQGKDDIFLDLKQKFWNT 125

Query:   221 FQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRS 265
             +++  ++W   Q  NF  +P   R  + G C+F+W   LC+ ++S
Sbjct:   126 YKSGLMYWPFVQLTNFSLVPVHWRTAYTGLCAFLWATFLCFSQQS 170

GO:0005102 "receptor binding" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO;ISS

GO:0010730 "negative regulation of hydrogen peroxide biosynthetic process" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0072593 "reactive oxygen species metabolic process" evidence=ISO;ISS

GO:1901029 "negative regulation of mitochondrial outer membrane permeabilization" evidence=ISO

UNIPROTKB|Q2QL34 MPV17L "Mpv17-like protein" [Homo sapiens (taxid:9606)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 50/172 (29%), Positives = 85/172 (49%)

Query:    94 IRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCI 153
             + R    +P  +N  +YG++    +A QQ +  R  N              R A L    
Sbjct:     8 LSRAARRHPWPTNVLLYGSLVSAGDALQQRLQGREAN---------WRQTRRVATLVVTF 58

Query:   154 NPNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKDDIFAEL 213
             + N  Y W + L++A  G++   ++ K+L DQ    P   + FY  MS+++GKDDIF +L
Sbjct:    59 HANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFYVGMSILQGKDDIFLDL 118

Query:   214 REKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRS 265
             ++KF  T+ +  ++W   Q  NF  +P   R  + G C F+W   +C+ ++S
Sbjct:   119 KQKFWNTYLSGLMYWPFVQLTNFSLVPVQWRTAYAGVCGFLWATFICFSQQS 170

GO:0016021 "integral to membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005102 "receptor binding" evidence=IPI

GO:0003674 "molecular_function" evidence=ND

GO:0005777 "peroxisome" evidence=IDA

GO:0072593 "reactive oxygen species metabolic process" evidence=IDA

GO:0010730 "negative regulation of hydrogen peroxide biosynthetic process" evidence=IDA

GO:1901029 "negative regulation of mitochondrial outer membrane permeabilization" evidence=IDA

WB|WBGene00022744 ZK470.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 58/184 (31%), Positives = 93/184 (50%)

Query:    92 IMIRRFFNNYPLLSNCAVYGTMCVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGT 151
             I +R F   + LL+N    GT C  A+     + ++++N     +  D     R A +G 
Sbjct:     3 ICVRNFLARHLLLTNV---GTSC--AQIGTADIIQQHINGDVDRDGWDWRRTCRMAAIGL 57

Query:   152 CINPNILYFWYKWLD-KAFTGKSAQIVVKKVLIDQFCMTPPLYAIFYTSMSLMEGKD--D 208
              + P+ L+ +Y+ LD + F G     V+KK+  D     P    IF T  S+ EGK    
Sbjct:    58 VMAPS-LHCFYRVLDTRKFIGSRNCKVLKKLAWDT-AFIPYFSCIFMTVGSIYEGKSLSA 115

Query:   209 IFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRSDLN 268
              FAE R K    ++     W PAQ INF+F+PPA RV++V   S ++  I+ ++K ++L+
Sbjct:   116 AFAEYRRKMWHIWKVDFTLWPPAQLINFYFMPPALRVVYVNLVSLLYNCIMSYIKNNELH 175

Query:   269 AESS 272
               S+
Sbjct:   176 HHST 179

GO:0016021 "integral to membrane" evidence=IEA

FB|FBgn0052263 CG32263 [Drosophila melanogaster (taxid:7227)]

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 59/172 (34%), Positives = 88/172 (51%)

Query:    96 RFFNNYPLLSNCAVYGTM-CVGAEASQQYVTKRYLNPTTPPEPIDTAALGRYAILGTCIN 154
             + F  Y LL+N    G +  +G   +QQY  +R+       +  D +  G   I G+ I 
Sbjct:    35 KLFGKYLLLTNTIGSGLLLAIGDAIAQQY--ERF----GEKKAFDYSRSGCMMITGSVIG 88

Query:   155 PNILYFWYKWLDKAFTGKSAQIVVKKVLIDQFCMTPP-LYAIFYTSMSLMEGKD--DIFA 211
             P I + +Y  LD    G S   V+ K+L+DQ  M+P  ++  FY S SL+ GK   +  +
Sbjct:    89 P-IQHGFYLLLDGVLPGTSGWGVLHKILVDQLIMSPIYIFLFFYVS-SLLGGKSFVECNS 146

Query:   212 ELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLK 263
             EL EKFL T+   C FW   Q +NF FL    RV+FV   + V++ +L  +K
Sbjct:   147 ELSEKFLYTWMLDCCFWPGLQYLNFRFLNSLYRVVFVNVANCVYVVLLSHIK 198

GO:0016021 "integral to membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	287
pfam04117	68	pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family	2e-19
pfam09440	133	pfam09440, eIF3_N, eIF3 subunit 6 N terminal domai	1e-04

>gnl|CDD|202894 pfam04117, Mpv17_PMP22, Mpv17 / PMP22 family

 Score = 79.6 bits (197), Expect = 2e-19
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 200 MSLMEGK--DDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWIN 257
           M L+EGK  ++I  +L+EKF PT + +   W P Q INF F+P   RV+FV      W  
Sbjct: 1   MGLLEGKSLEEIKEKLKEKFWPTLKANWKVWPPVQFINFAFVPVHYRVLFVNLVGIGWNT 60

Query: 258 ILCWLKRS 265
            L ++   
Sbjct: 61  YLSYVNNK 68

The 22-kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information. Mpv17 is a closely related peroxisomal protein. In mouse, the Mpv17 protein is involved in the development of early-onset glomerulosclerosis. More recently a homolog of Mpv17 in S. cerevisiae has been been found to be an integral membrane protein of the inner mitochondrial membrane where it has been proposed to have a role in ethanol metabolism and tolerance during heat-shock. Defects in MPV17 is associated with mitochondrial DNA depletion syndrome (MDDS) and Navajo neurohepatopathy (NNH). MDDS is a clinically heterogeneous group of disorders characterized by a reduction in mitochondrial DNA (mtDNA) copy number. Primary mtDNA depletion is inherited as an autosomal recessive trait and may affect single organs, typically muscle or liver, or multiple tissues. Individuals with the hepatocerebral form of mitochondrial DNA depletion syndrome have early progressive liver failure and neurologic abnormalities, hypoglycemia, and increased lactate in body fluids. NNH is an autosomal recessive disease that is prevalent among Navajo children in the South Western states of America. The major clinical features are hepatopathy, peripheral neuropathy, corneal anesthesia and scarring, acral mutilation, cerebral leukoencephalopathy, failure to thrive, and recurrent metabolic acidosis with intercurrent infections. Infantile, childhood, and classic forms of NNH have been described. Mitochondrial DNA depletion was detected in the livers of patients, suggesting a primary defect in mtDNA maintenance. Length = 68

>gnl|CDD|220243 pfam09440, eIF3_N, eIF3 subunit 6 N terminal domain

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 2   LKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFD 54
           L  +R +V+  LQEL   V  +  LL +  V+K + S  D+K    +L +E  
Sbjct: 67  LAAKRQEVLKELQELQEEVAPITKLLEDPEVIKNLRS--DKKANLEFLEEEHG 117

This is the N terminal domain of subunit 6 translation initiation factor eIF3. Length = 133

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	287
KOG1944|consensus	222		100.0
KOG2758|consensus	432		99.95
PF04117	68	Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR0	99.86
PF09440	133	eIF3_N: eIF3 subunit 6 N terminal domain; InterPro	99.7

>KOG1944|consensus

Probab=100.00  E-value=3e-37  Score=274.02  Aligned_cols=166  Identities=33%  Similarity=0.556  Sum_probs=155.9

Q ss_pred             hhcCchhhHhHhhhHHH-hHHHHHHHhhhcccCCCCCC-CCCCchhhHHHHhhhcccCCchhHhHHHHHHHHHccCcchH
Q psy17613         98 FNNYPLLSNCAVYGTMC-VGAEASQQYVTKRYLNPTTP-PEPIDTAALGRYAILGTCINPNILYFWYKWLDKAFTGKSAQ  175 (287)
Q Consensus        98 l~~~P~lt~~i~s~vl~-~~gD~laQ~~~~~~~~~~~~-~~~~D~~R~~r~~~~G~~~~gP~~~~wy~~Ld~~~p~~~~~  175 (287)
                      ...+|+++++++++.+. .+||+++|.++.+..    . ...+|+.|++||+++|+++.||.+|+||+.|++++|.++..
T Consensus        46 ~~~~~~l~~~i~~~~~~~~~~d~~~q~~~~~~~----~~~~~~d~~rtlr~~~~G~~f~gp~~~~Wy~~L~~~~p~~~~~  121 (222)
T KOG1944|consen   46 FSLYPLLTKAITTSLLLAAAGDVISQSLEGRSK----KLFQTLDLTRTLRMGIFGFLFVGPTLHYWYRLLSKLFPKKTLI  121 (222)
T ss_pred             hhhhhHHHHHHHHHHHHHHhchhhhhhhhhhcc----cccccccHHHHHHHHhhhhheeccchhHHHHHHHHHccCccHH
Confidence            35688888888888877 999999999986531    2 57899999999999998899999999999999999999999


Q ss_pred             HHHHHHHHHHhccchhhHHHHHHHHHhhCCc--HHHHHHHHHhhHHHHHhccchhhHHHHhhhhccCCccchhhhhhhhh
Q psy17613        176 IVVKKVLIDQFCMTPPLYAIFYTSMSLMEGK--DDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSF  253 (287)
Q Consensus       176 ~~~~Kvl~Dq~v~~P~~~~~f~~~~~~l~G~--~~~~~~lk~~~~~~l~~~~~vWp~~q~inF~~VP~~~Rvlf~n~v~~  253 (287)
                      ++++|+++||++++|+.+.+||.+|++++|+  +++.++++++++|+++++|++||++|++||+|||+++|++++|++++
T Consensus       122 ~~~~kvl~dql~~~P~~~~~ff~~~~~legk~~~~~~~~~~~~~~p~l~~~~~~WP~~q~inF~~VP~~~rvl~~~~vsl  201 (222)
T KOG1944|consen  122 TVVKKVLLDQLVFAPLFIVVFFLLMGLLEGKTNEEAKAKLKRKFWPTLKANWMVWPLVQFINFRLVPLQYRVLFVNIVSL  201 (222)
T ss_pred             HHHHHHHHhhhhhchHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhhheecchhheeeeEEccccceehhhhhHHH
Confidence            9999999999999999999999999999999  68999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhcCCc
Q psy17613        254 VWINILCWLKRSDL  267 (287)
Q Consensus       254 ~W~~~LS~~~~~~~  267 (287)
                      +|++|||+++++..
T Consensus       202 ~W~~~Ls~~~~~~~  215 (222)
T KOG1944|consen  202 VWNTYLSYKNASLV  215 (222)
T ss_pred             HHHHHHHHHhhccc
Confidence            99999999999883

>KOG2758|consensus

Probab=99.95  E-value=2e-29  Score=228.89  Aligned_cols=123  Identities=19%  Similarity=0.281  Sum_probs=115.6

Q ss_pred             ChhHHHHHHHHHHHHHhHhHHHHHHhcCCHHHHHHhhchhhHHHHHHHHHhhcCCCc------cccccccccccccc--c
Q psy17613          1 TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQL------SNCAVYGTMCVGAE--A   72 (287)
Q Consensus         1 e~~~kr~~V~~~l~~l~~~~~~i~~~l~~~~v~~~l~~~rd~~~~~~~L~~~~~~~~------y~~~~f~~~cg~y~--a   72 (287)
                      ++++||.+|+++|++||+|++||+++++|||+.++|+++||+++|+++|+++||||+      |+||||||+||||+  +
T Consensus        70 a~~ekr~~Vla~lkeLe~ev~piv~~le~Pd~~~~~~~~k~~~~~l~~L~e~ynf~~e~i~~lykyakfqyeCGNY~gAs  149 (432)
T KOG2758|consen   70 ALVEKRTEVLAELKELEEEVAPIVKVLENPDLIAALRSDKDRVQNLQHLQEHYNFTPERIETLYKYAKFQYECGNYSGAS  149 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHhhhhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhccCcccHH
Confidence            478999999999999999999999999999999999999999999999999999999      99999999999999  8


Q ss_pred             ccccc--------cccccCCCCcc-hhHHH---HHHhhhcCchhhHhHhhhHHHhHHHHHHHh
Q psy17613         73 SQQYV--------TKRYLPSFSCP-VSTIM---IRRFFNNYPLLSNCAVYGTMCVGAEASQQY  123 (287)
Q Consensus        73 ~~l~~--------~~~~l~~~~~~-a~~~~---y~~~l~~~P~lt~~i~s~vl~~~gD~laQ~  123 (287)
                      +|||+        ++|+++++||| ||+|+   |+.+++....++..+++.........+.|+
T Consensus       150 ~yLY~~r~l~~~~d~n~lsalwGKlASEIL~qnWd~A~edL~rLre~IDs~~f~~~~~~l~qR  212 (432)
T KOG2758|consen  150 DYLYFYRALVSDPDRNYLSALWGKLASEILTQNWDGALEDLTRLREYIDSKSFSTSAQQLQQR  212 (432)
T ss_pred             HHHHHHHHhcCCcchhhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcccccccHHHHHHHH
Confidence            89988        78899999999 99998   999999999999999999887666667774

>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes

Probab=99.86  E-value=3.1e-22  Score=146.10  Aligned_cols=66  Identities=41%  Similarity=0.864  Sum_probs=63.6

Q ss_pred             HHhhCCc--HHHHHHHHHhhHHHHHhccchhhHHHHhhhhccCCccchhhhhhhhhHHHHHHHHHhcC
Q psy17613        200 MSLMEGK--DDIFAELREKFLPTFQTSCIFWLPAQTINFFFLPPAARVIFVGTCSFVWINILCWLKRS  265 (287)
Q Consensus       200 ~~~l~G~--~~~~~~lk~~~~~~l~~~~~vWp~~q~inF~~VP~~~Rvlf~n~v~~~W~~~LS~~~~~  265 (287)
                      |++++|+  +++.++++++++++++++|++|||+|++||+|||+++|++|+|+++++||+|||+++||
T Consensus         1 Mg~l~g~s~~~~~~~l~~~~~~~~~~~~~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~~LS~~~~r   68 (68)
T PF04117_consen    1 MGLLEGKSWEEIKEKLKRDYWPTLKASWKFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNTYLSYIANR   68 (68)
T ss_pred             CCcccCCCHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHhcccChhhhhhhhhhHHHHHHHHHHHHhcC
Confidence            5789999  59999999999999999999999999999999999999999999999999999999985

PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane

>PF09440 eIF3_N: eIF3 subunit 6 N terminal domain; InterPro: IPR019010 This entry represents the N-terminal domain of subunit 6 (or e) (eIF3e) of the translation initiation factor eIF3

Probab=99.70  E-value=1.9e-17  Score=135.76  Aligned_cols=62  Identities=29%  Similarity=0.440  Sum_probs=60.8

Q ss_pred             ChhHHHHHHHHHHHHHhHhHHHHHHhcCCHHHHHHhhchhhHHHHHHHHHhhcCCCc------ccccccc
Q psy17613          1 TLKQRRVQVVTALQELNTSVTVVLNLLSNDAVMKQMESVRDQKTLCTYLTKEFDTQL------SNCAVYG   64 (287)
Q Consensus         1 e~~~kr~~V~~~l~~l~~~~~~i~~~l~~~~v~~~l~~~rd~~~~~~~L~~~~~~~~------y~~~~f~   64 (287)
                      |+++||++|+++|++|+++++||+++|+||||+++|||  ||++|++||+++||||+      |+|||||
T Consensus        66 e~~~kr~~Vl~~l~~l~~~~~~v~~~~~~~ev~~~l~~--dk~~nl~~L~~~h~it~e~id~LY~~akfq  133 (133)
T PF09440_consen   66 ELAEKREEVLAELKELEEETEPVLELLEDPEVVKNLRS--DKKQNLEYLEENHGITPEMIDALYKYAKFQ  133 (133)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHc--cHHHHHHHHHHhcCCCHHHHHHHHHHhCcC
Confidence            58899999999999999999999999999999999999  99999999999999999      9999998

EIF3 is required in protein synthesis in mammalian cells and, together with other initiation factors, stimulates binding of initiator methionyl-tRNAi and mRNA to the 40S ribosomal subunit to form the 48 S initiation complex []. The eIF3 complex also prevents premature association of the 40 and 60 S ribosomal subunits and interacts with other initiation factors involved in start codon selection. EIF3 has at least 13 protein components (eIF3a-m or 1-13), where subunits h, i, k, and m are likely to be on the periphery of the complex []. Subunit 6 is produced by the int6 gene, one of the frequent integration sites for mouse mammary tumor viruses [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00