Psyllid ID: psy17720


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80
MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQVAVGKR
ccccccccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEEcccccccccccccccccEEEccc
ccHHHcccEEEEEEccccHHHHHHHHHHHHHcccccEEEEEccccccccEEEEEEEcccccccccccccccHHHHHHccc
MRYCSRTARAVFqfypensaQIELVTSQAMRAGFYGGlvvdyphstkaKKFFLVLMtggdlplppalgegegsqvavgkr
MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLplppalgegegsqvavgkr
MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQVAVGKR
*****RTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDL*******************
******TARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGG*********************
MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGE***********
MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGD********************
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oooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
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MRYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGEGSQVAVGKR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query80 2.2.26 [Sep-21-2011]
Q55DA6287 Probable methyltransferas yes N/A 0.8 0.222 0.578 1e-17
Q9CY21281 Uncharacterized methyltra yes N/A 0.887 0.252 0.577 3e-17
Q58DP0281 Uncharacterized methyltra yes N/A 0.8 0.227 0.625 7e-17
O43709281 Uncharacterized methyltra no N/A 0.825 0.234 0.575 3e-16
Q10162268 Putative methyltransferas yes N/A 0.725 0.216 0.465 1e-09
P25627275 Putative methyltransferas yes N/A 0.6 0.174 0.541 4e-08
>sp|Q55DA6|WBS22_DICDI Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1 Back     alignment and function desciption
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/64 (57%), Positives = 52/64 (81%)

Query: 5   SRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLP 64
           +R  +A+ QFYPENSAQIE++T+ A+R GF GGL++D+P+S+KAKK+FLVL TG +  +P
Sbjct: 151 TRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGNNNIMP 210

Query: 65  PALG 68
            A G
Sbjct: 211 SAKG 214




Probable DNA methyltransferase.
Dictyostelium discoideum (taxid: 44689)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9CY21|WBS22_MOUSE Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1 Back     alignment and function description
>sp|Q58DP0|WBS22_BOVIN Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1 Back     alignment and function description
>sp|O43709|WBS22_HUMAN Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2 Back     alignment and function description
>sp|Q10162|YAU6_SCHPO Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26A3.06 PE=4 SV=1 Back     alignment and function description
>sp|P25627|BUD23_YEAST Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD23 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query80
189238660 274 PREDICTED: similar to CG10903 CG10903-PA 0.875 0.255 0.785 4e-25
289740771 275 putative protein carboxyl methylase [Glo 0.837 0.243 0.791 9e-25
357631657 276 hypothetical protein KGM_15588 [Danaus p 0.95 0.275 0.708 7e-24
157127847 275 hypothetical protein AaeL_AAEL010949 [Ae 0.95 0.276 0.714 7e-24
195344378 276 GM10995 [Drosophila sechellia] gi|195569 0.837 0.242 0.791 2e-23
194899416 276 GG14363 [Drosophila erecta] gi|190650959 0.837 0.242 0.791 2e-23
312378003 279 hypothetical protein AND_10530 [Anophele 0.95 0.272 0.730 2e-23
195498585 276 GE24963 [Drosophila yakuba] gi|194182687 0.837 0.242 0.791 2e-23
21355093 276 CG10903, isoform A [Drosophila melanogas 0.837 0.242 0.791 2e-23
194743420 276 GF18155 [Drosophila ananassae] gi|190627 0.837 0.242 0.791 3e-23
>gi|189238660|ref|XP_972432.2| PREDICTED: similar to CG10903 CG10903-PA [Tribolium castaneum] gi|270008360|gb|EFA04808.1| hypothetical protein TcasGA2_TC014857 [Tribolium castaneum] Back     alignment and taxonomy information
 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/70 (78%), Positives = 64/70 (91%)

Query: 5   SRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLP 64
           SR+ARAVFQFYPENS Q+ELVT+QAM+AGFYGG+VVD+P+STKAKKFFLVLMTGG++PLP
Sbjct: 150 SRSARAVFQFYPENSEQMELVTAQAMKAGFYGGVVVDFPNSTKAKKFFLVLMTGGNMPLP 209

Query: 65  PALGEGEGSQ 74
             LG  E SQ
Sbjct: 210 KGLGTEEESQ 219




Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289740771|gb|ADD19133.1| putative protein carboxyl methylase [Glossina morsitans morsitans] Back     alignment and taxonomy information
>gi|357631657|gb|EHJ79126.1| hypothetical protein KGM_15588 [Danaus plexippus] Back     alignment and taxonomy information
>gi|157127847|ref|XP_001661209.1| hypothetical protein AaeL_AAEL010949 [Aedes aegypti] gi|108872791|gb|EAT37016.1| AAEL010949-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|195344378|ref|XP_002038765.1| GM10995 [Drosophila sechellia] gi|195569115|ref|XP_002102557.1| GD19965 [Drosophila simulans] gi|194133786|gb|EDW55302.1| GM10995 [Drosophila sechellia] gi|194198484|gb|EDX12060.1| GD19965 [Drosophila simulans] Back     alignment and taxonomy information
>gi|194899416|ref|XP_001979256.1| GG14363 [Drosophila erecta] gi|190650959|gb|EDV48214.1| GG14363 [Drosophila erecta] Back     alignment and taxonomy information
>gi|312378003|gb|EFR24691.1| hypothetical protein AND_10530 [Anopheles darlingi] Back     alignment and taxonomy information
>gi|195498585|ref|XP_002096586.1| GE24963 [Drosophila yakuba] gi|194182687|gb|EDW96298.1| GE24963 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|21355093|ref|NP_649762.1| CG10903, isoform A [Drosophila melanogaster] gi|442617958|ref|NP_001262365.1| CG10903, isoform B [Drosophila melanogaster] gi|7298980|gb|AAF54183.1| CG10903, isoform A [Drosophila melanogaster] gi|17945482|gb|AAL48794.1| RE22146p [Drosophila melanogaster] gi|220948154|gb|ACL86620.1| CG10903-PA [synthetic construct] gi|220957392|gb|ACL91239.1| CG10903-PA [synthetic construct] gi|440217189|gb|AGB95747.1| CG10903, isoform B [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194743420|ref|XP_001954198.1| GF18155 [Drosophila ananassae] gi|190627235|gb|EDV42759.1| GF18155 [Drosophila ananassae] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query80
FB|FBgn0037543276 CG10903 [Drosophila melanogast 0.837 0.242 0.791 8.7e-24
UNIPROTKB|Q5ZI10282 WBSCR22 "Uncharacterized prote 0.937 0.265 0.558 9.5e-18
DICTYBASE|DDB_G0269722287 DDB_G0269722 "methyltransferas 0.837 0.233 0.588 1.6e-17
ZFIN|ZDB-GENE-070410-68282 wbscr22 "Williams Beuren syndr 0.787 0.223 0.666 2.5e-17
WB|WBGene00016166283 C27F2.4 [Caenorhabditis elegan 0.9 0.254 0.589 5.3e-17
MGI|MGI:1913388281 Wbscr22 "Williams Beuren syndr 0.887 0.252 0.577 1.1e-16
RGD|1589742281 Wbscr22 "Williams Beuren syndr 0.887 0.252 0.577 1.4e-16
RGD|1597085281 LOC360830 [Rattus norvegicus ( 0.887 0.252 0.577 1.4e-16
UNIPROTKB|Q58DP0281 WBSCR22 "Uncharacterized methy 0.8 0.227 0.625 1.8e-16
UNIPROTKB|F1RJN0281 WBSCR22 "Uncharacterized prote 0.8 0.227 0.625 2.9e-16
FB|FBgn0037543 CG10903 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
 Identities = 53/67 (79%), Positives = 59/67 (88%)

Query:     5 SRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLP 64
             +RTARAVFQFYPENS QIE+VTSQAM+AGFYGGLVVDYP+S KAKK++LVLMTGG   LP
Sbjct:   152 TRTARAVFQFYPENSDQIEMVTSQAMKAGFYGGLVVDYPNSAKAKKYYLVLMTGGSAELP 211

Query:    65 PALGEGE 71
              ALG  E
Sbjct:   212 QALGSPE 218




GO:0008757 "S-adenosylmethionine-dependent methyltransferase activity" evidence=ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0022008 "neurogenesis" evidence=IMP
UNIPROTKB|Q5ZI10 WBSCR22 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269722 DDB_G0269722 "methyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-070410-68 wbscr22 "Williams Beuren syndrome chromosome region 22" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
WB|WBGene00016166 C27F2.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
MGI|MGI:1913388 Wbscr22 "Williams Beuren syndrome chromosome region 22" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1589742 Wbscr22 "Williams Beuren syndrome chromosome region 22" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1597085 LOC360830 [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q58DP0 WBSCR22 "Uncharacterized methyltransferase WBSCR22" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RJN0 WBSCR22 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q55DA6WBS22_DICDI2, ., 1, ., 1, ., -0.57810.80.2229yesN/A
Q58DP0WBS22_BOVIN2, ., 1, ., 1, ., -0.6250.80.2277yesN/A
P25627BUD23_YEAST2, ., 1, ., 1, ., -0.54160.60.1745yesN/A
Q9CY21WBS22_MOUSE2, ., 1, ., 1, ., -0.57740.88750.2526yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 80
KOG1541|consensus270 99.97
PLN02535 364 glycolate oxidase 85.16
PRK11197 381 lldD L-lactate dehydrogenase; Provisional 82.37
>KOG1541|consensus Back     alignment and domain information
Probab=99.97  E-value=3.8e-32  Score=207.83  Aligned_cols=68  Identities=63%  Similarity=0.997  Sum_probs=63.1

Q ss_pred             CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEEeeCCCCCCcceEEEEEEecCCCCCCCcccCCC
Q psy17720          2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLVVDYPHSTKAKKFFLVLMTGGDLPLPPALGEGE   71 (80)
Q Consensus         2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlvVD~P~S~kaKK~yLvL~~G~~~~lp~~l~~~~   71 (80)
                      .||+||+||||||||||++|+|||+++||+|||+||||||||+|+|+|||||||++|+.  +|+.++.++
T Consensus       148 ~~l~rg~raV~QfYpen~~q~d~i~~~a~~aGF~GGlvVd~Pes~k~kK~yLVL~~g~~--~~~~l~~~~  215 (270)
T KOG1541|consen  148 SCLKRGARAVLQFYPENEAQIDMIMQQAMKAGFGGGLVVDWPESTKNKKYYLVLMTGGV--VPRALTAGG  215 (270)
T ss_pred             hhhccCceeEEEecccchHHHHHHHHHHHhhccCCceeeecccccccceeEEEEecCCc--ccccccCCc
Confidence            68999999999999999999999999999999999999999999999999999999976  666665443



>PLN02535 glycolate oxidase Back     alignment and domain information
>PRK11197 lldD L-lactate dehydrogenase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query80
1xdz_A240 Methyltransferase GIDB; MCSG, protein structure in 90.7
2wa2_A276 Non-structural protein 5; transferase, S-adenosyl- 87.85
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 83.2
3evz_A230 Methyltransferase; NYSGXRC, NEW YORK SGX research 83.09
2gjf_A78 Designed protein; procarboxypeptidase, de novo pro 82.26
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20 Back     alignment and structure
Probab=90.70  E-value=0.61  Score=31.45  Aligned_cols=53  Identities=6%  Similarity=-0.037  Sum_probs=37.4

Q ss_pred             CcccCCceEEEEEccCChHHHHHHHHHHHHccccceEE--eeCCCCCCcceEEEEEE
Q psy17720          2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFYGGLV--VDYPHSTKAKKFFLVLM   56 (80)
Q Consensus         2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~GGlv--VD~P~S~kaKK~yLvL~   56 (80)
                      ++|++||+.++..-+...+.++.+.+...++||.---+  +..|..  ....+|++.
T Consensus       162 ~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--~~~~~l~~~  216 (240)
T 1xdz_A          162 PLVKKNGLFVALKAASAEEELNAGKKAITTLGGELENIHSFKLPIE--ESDRNIMVI  216 (240)
T ss_dssp             GGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEEEEEEEEEECTTT--CCEEEEEEE
T ss_pred             HhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCeEeEEEEEecCCC--CCceEEEEE
Confidence            68999999999877777777888888888999975433  345544  344555554



>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A* Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus} Back     alignment and structure
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query80
d1o54a_266 Hypothetical protein TM0748 {Thermotoga maritima [ 81.1
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]
Probab=81.10  E-value=0.32  Score=33.43  Aligned_cols=32  Identities=9%  Similarity=-0.006  Sum_probs=27.7

Q ss_pred             CcccCCceEEEEEccCChHHHHHHHHHHHHcccc
Q psy17720          2 RYCSRTARAVFQFYPENSAQIELVTSQAMRAGFY   35 (80)
Q Consensus         2 ~~~~rGaRAV~QfYPen~~Q~emI~~~A~kaGF~   35 (80)
                      ++||+|||.|+  |--+.+|++.+..+..+.||.
T Consensus       192 ~~LKpGG~lv~--~~P~~~Qv~~~~~~l~~~gF~  223 (266)
T d1o54a_         192 EALKGGGRFAT--VCPTTNQVQETLKKLQELPFI  223 (266)
T ss_dssp             HHEEEEEEEEE--EESSHHHHHHHHHHHHHSSEE
T ss_pred             hhcCCCCEEEE--EeCcccHHHHHHHHHHHCCce
Confidence            57999999986  444899999999999999995