Psyllid ID: psy17902

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450----
Protein Sequence
MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK
Secondary Structure (PSIPRED)
cccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHcEEEEEEEccccEEEEEEEcccccccccEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEcccccccccccccccEEEEEEcccccEEEEEcccccEEEEccccccEEccccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEccccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEccccEEEEccccccEEEEEEccccccccccccccEEEEEEcccccEEEEccccccEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEEcccccEEEEcccccccccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEcccccccccccccHHHHHcccccccccEEEEEcccccEEEEEcccccEEEEEEcccccccEEEEEEEcccccEEEEEccccEEEEEcccccEEEEcccccccEEEEEEcccccEEEccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEcccccHHEEcccccccEEEEEEcccccEEEEEccccEEEEEEccccEEEEEccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEcccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEccccccccccccccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEEccccccccEEEEEEcccccEEEEEcccccEEEEEEcccccccEEEEEEcccc
Coil and Loop (DISEMBL)
msffirnkkpaatnnnslkskkrkfsekptkskktvkpdldeeltsdeddegigfdsqdfeEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKlndskdkhVLKKLETVVLEQEGKLRVNIADRLANATVVCtkfngkphrasITCIavtsdskhvySACKDGIIIKWLLETRskvcsspfvktdrksyppILALAVANnnelvasgdnnsniKLWSSSLEHLHtftghkapitgLAISFECdtlysssndrsikvwnieDRAYVETLFghqsaitsldilaknrvissggtdksvRVWKIQEESQLVFnghsrgidmtrrvndqqfitcgedgtLSLWSILKkvpthtipvahgydssssepnwiTSVAClhnsdlvasgsydgcvklwkitpkrtleflqdiplsgvinslvftsdhkhlvagigtehrfgrwktikgvkNTVAIIDIQLK
Flexible Loop (DISEMBL)
msffirnkkpaatnnnslkskkrkfsekptkskktvkpdldeeltsdeddegiGFDSQDFEEHSeveedlteqERKVILAKKYLEEIEKvekeklndskdkhvlkkletvvleqegklrvnIADRLANATVVCtkfngkphrASITCIAvtsdskhvySACKDGIIIKWLLETRSKVCSspfvktdrksYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHqsaitsldilaknrvissggtdksvrvwkiqeesqlvfnghsrgidMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAgigtehrfgrwktikgvkntvaiidiqlk
Low Complexity Region (SEG)
MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPdldeeltsdeddeGIGFDSQDFEEHSEVEEDLTEQERKVILAkkyleeiekvekekLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIlalavannnelvaSGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK
Disordered region (IsUnstruct)
****************************************************************************VILAKKYLE****************HVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS***EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI***
Disordered Region (DISOPRED)
MSFF*********************************************************************ERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK
Disordered Region (DISEMBL)
MSFFIRNKKPAATNNNS*********************DLDEELTSDEDDEGIGFDSQD*************QERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK
Disordered Region (DISPRO)
*****RN********NSLKS*******KPTKSKKTVKPDLDEELTSDEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQL*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILxxxxxxxxxxxxxxxxxxxxxKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	454	2.2.26 [Sep-21-2011]
O43818	475	U3 small nucleolar RNA-in	yes	N/A	0.837	0.8	0.431	2e-85
Q91WM3	475	U3 small nucleolar RNA-in	yes	N/A	0.837	0.8	0.423	2e-82
Q9P7C0	524	Uncharacterized WD repeat	yes	N/A	0.837	0.725	0.325	4e-53
Q06506	573	Ribosomal RNA-processing	yes	N/A	0.942	0.746	0.241	2e-27
Q8YRI1	1526	Uncharacterized WD repeat	no	N/A	0.667	0.198	0.247	1e-20
Q00808	1356	Vegetative incompatibilit	no	N/A	0.616	0.206	0.252	2e-19
Q9BVA0	655	Katanin p80 WD40 repeat-c	no	N/A	0.484	0.335	0.252	8e-19
Q8BG40	658	Katanin p80 WD40 repeat-c	no	N/A	0.484	0.334	0.252	8e-19
Q4WT34	453	Pre-mRNA-splicing factor	no	N/A	0.513	0.514	0.284	1e-17
Q5BE22	452	Pre-mRNA-splicing factor	no	N/A	0.513	0.515	0.288	1e-17

>sp|O43818|U3IP2_HUMAN U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens GN=RRP9 PE=1 SV=1

 Score =  316 bits (810), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/394 (43%), Positives = 248/394 (62%), Gaps = 14/394 (3%)

Query: 71  TEQERKVILAKKYLEEIEKVEKEKLNDS--KDKHVLKKLETVVLEQEGKLRVNIADRL-A 127
           T QE+K+ LAK YLE++ + E+EK      ++  V  +L+  VLEQ G+L+  +A  + A
Sbjct: 74  TAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKLVAKEIQA 133

Query: 128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR 187
            A+       G  H+ SITC+ VT D   ++SA KD  IIKW +E+  K+   P  K   
Sbjct: 134 PASADIRVLRG--HQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKLHVIPRAKKGA 191

Query: 188 KSYPP-----ILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISF 241
           +  PP     +L +A++++ + +ASGD +  I +W + S +HL+TFTGH+  ++GLA   
Sbjct: 192 EGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRR 251

Query: 242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
               LYS+S+DRS+KVWN+ + +YVETLFGHQ A+ +LD L++   +++GG D +VRVWK
Sbjct: 252 GTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWK 311

Query: 302 IQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY--DS 359
           I EESQLVF GH   ID    +N++  ++  +DG+++LW + KK P      AHG   + 
Sbjct: 312 IPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLRGEP 371

Query: 360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTS 418
              +P WI+SVA L N+DLVA+GS+  CV+LW+     R L+ L DIPL G INSL F+S
Sbjct: 372 GLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSS 431

Query: 419 DHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
               LVAG+G EHR GRW  IK  +N+V II ++
Sbjct: 432 SGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.
Homo sapiens (taxid: 9606)

>sp|Q91WM3|U3IP2_MOUSE U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus GN=Rrp9 PE=1 SV=1

 Score =  306 bits (784), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/394 (42%), Positives = 245/394 (62%), Gaps = 14/394 (3%)

Query: 71  TEQERKVILAKKYLEEIEKVEKEKLNDS--KDKHVLKKLETVVLEQEGKLRVNIADRL-A 127
           T QE+K+ LAK YLE++ + E+EK      ++  V  +L+  VLEQ G+L+ ++A  + A
Sbjct: 74  TAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRLQKSVAKEIQA 133

Query: 128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR 187
            A        G  H+ SITC+ +T D   ++SA KD  IIKW +ET  K+   P  K   
Sbjct: 134 PAPTDIRVLRG--HQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKLHVIPRAKKGA 191

Query: 188 KSYPP-----ILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISF 241
           +  P      +L +A++++ + +ASGD +  I +W + S +HL+TFTGH+  ++GLA   
Sbjct: 192 QGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRK 251

Query: 242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
               LYS+S+DRS+KVWN  + +YVETLFGHQ A+ +LD L++   +++GG D +VRVWK
Sbjct: 252 GTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWK 311

Query: 302 IQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS 361
           I EESQLVF GH   ID    +N++  ++  +DG+++LW + KK P      AHG     
Sbjct: 312 IPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAHGLHGEP 371

Query: 362 S--EPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTS 418
              +P W++SVA L N+DLVA+GS++  V+LW+     R L+ L DIPL G INSL F+S
Sbjct: 372 GLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIPLVGFINSLKFSS 431

Query: 419 DHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
               LVAG+G EHR GRW  IK  +N+V II ++
Sbjct: 432 AGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.

Mus musculus (taxid: 10090)

>sp|Q9P7C0|YKU5_SCHPO Uncharacterized WD repeat-containing protein C2E1P5.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2E1P5.05 PE=4 SV=1

 Score =  209 bits (532), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 234/448 (52%), Gaps = 68/448 (15%)

Query: 71  TEQERKVILAKKYLEEI--EKVEKEKLNDSK-DKHVL-KKLETVVLEQEGKLRVNIADRL 126
           T  E+++ LA++YL+E+  E VE    +  + D+ +L  +L+  VLE++G++ ++   ++
Sbjct: 66  TAAEKRLRLAREYLDEVKNELVEDGGFDAKEVDRELLASRLKEDVLEKKGQMYLDYTSKI 125

Query: 127 -ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLL------ETRS---- 175
             +  +   +  G+  R  +  +A  +    VYSA K G+I KW        E R     
Sbjct: 126 NPDVKIETAQLRGRHMRPLVGVVAYEN---FVYSADKSGLIQKWEALQEKDTENRENDDH 182

Query: 176 ------KVCSSP--FVKTDRKS---YPPILALAVANNNELVASGDNNSNIKLWSS-SLEH 223
                 K+   P  F ++ R        I  LA++N+   + +G  +  I +  S +LE 
Sbjct: 183 EIGKAIKLHFRPIKFSRSRRGENDHVKEITCLAISNDGRWIVTGGLDHRIVIRDSVTLEP 242

Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
            H +  H+  + GLA+    + ++S S DRSIKVW+++  +Y+ETLFGHQ  I  +D LA
Sbjct: 243 QHCWKHHRDAVMGLAMRRGTNEMFSCSADRSIKVWSLDQMSYIETLFGHQDVIFGVDALA 302

Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFN----------GHSRG-IDMTRRVNDQQFITCG 332
           + R +S GG D++ R+WKI EESQLVF           G+  G +D    +++  F+T  
Sbjct: 303 RERCVSVGGRDRTSRLWKIVEESQLVFRSGGTSMKATAGYMEGSVDCVAMIDEDHFVTGS 362

Query: 333 EDGTLSLWSILKKVPTHTIPVAHGYD-----------------SSSSEPNWITSVACLHN 375
           ++G ++LWS+ +K P  T P+AHG D                 +   +P WITS+A +  
Sbjct: 363 DNGVIALWSVQRKKPLFTYPLAHGLDPILAPGRHSAETSPDPVTIPPQPRWITSLAAIPY 422

Query: 376 SDLVASGSYDGCVKLWKITPK-RTLEFLQ-DIPLS--GVINSLVFTSDHK------HLVA 425
           S+L ASGS+DG ++LWKI    R+ E L    PLS  G INSL  +   K       + A
Sbjct: 423 SNLFASGSWDGNIRLWKIAEGLRSFEPLTIATPLSVYGCINSLSLSLQGKGKQSEVRVFA 482

Query: 426 GIGTEHRFGRWKTIKGVKNTVAIIDIQL 453
             G E R GRWKT++G+ N+  + +I L
Sbjct: 483 ACGRETRVGRWKTLRGIPNSGFVFNIPL 510

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q06506|RRP9_YEAST Ribosomal RNA-processing protein 9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP9 PE=1 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 231/568 (40%), Gaps = 140/568 (24%)

Query: 19  KSKKRKFSEKPTKSKKTVKPDLDEELT---SDEDDEGIGFDSQDFEEHSEVEEDLTEQER 75
           + KKRK S+      K   P +DEE+T   S+ED++    D +D  E  E  E     ++
Sbjct: 6   QQKKRKRSKGEVNPSK---PTVDEEITDPSSNEDEQLEVSDEEDALESEEEFEGENPADK 62

Query: 76  KVILAKKYLEEIE-----------KVEKEKLNDSKDKHV----------------LKKLE 108
           +  LAK+YLE ++             E++ LN+ K++ +                  +L+
Sbjct: 63  RRRLAKQYLENLKSEANDILTDNRNAEEKDLNNLKERTIDEYNNFDAGDLDKDIIASRLK 122

Query: 109 TVVLEQEGKLRVNIADRL--ANATVVCTKFNGKPHRASITCIAVTSDSK----------- 155
             V EQ+G++     D+L  + A    T+  G+ +   I+C     +             
Sbjct: 123 EDVAEQQGRVFRYFGDKLLISEAKQSFTRV-GENNLTCISCFQPVLNKYTFEESSNGDKN 181

Query: 156 ----HVYSACKDGIIIKWLLETRSK----------------VCSSPFVKTDRKSYPPILA 195
                 Y+  KD  + K+ +   SK                     +  T    Y  IL 
Sbjct: 182 KGRLFAYTVSKDLQLTKYDITDFSKRPKKLKYAKGGAKYIPTSKHEYENTTEGHYDEILT 241

Query: 196 LAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT--GHKAPITGLAISFECDTLYSSSND 252
           +A + + + V +G  +  + +WS+ SL  +        +  +  LA     D LY+S  D
Sbjct: 242 VAASPDGKYVVTGGRDRKLIVWSTESLSPVKVIPTKDRRGEVLSLAFRKNSDQLYASCAD 301

Query: 253 RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNG 312
             I+ ++I   + +E L+GH   +  +  LA  R ++ G  D++  +WKI +E++L F G
Sbjct: 302 FKIRTYSINQFSQLEILYGHHDIVEDISALAMERCVTVGARDRTAMLWKIPDETRLTFRG 361

Query: 313 HSR------------------------------------GIDMTRRVNDQQFITCGEDGT 336
                                                   ID+   V+D  FIT  ++G 
Sbjct: 362 GDEPQKLLRRWMKENAKEGEDGEVKYPDESEAPLFFCEGSIDVVSMVDDFHFITGSDNGN 421

Query: 337 LSLWSILKKVPTHTIPVAHG------YDSSSSE-----------------PNWITSVACL 373
           + LWS+ KK P  T  +AHG      ++  S E                 P WITS+  +
Sbjct: 422 ICLWSLAKKKPIFTERIAHGILPEPSFNDISGETDEELRKRQLQGKKLLQPFWITSLYAI 481

Query: 374 HNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIP-LSGVINSLVFTSDHKH------LVA 425
             S++  SGS+ G +K+WKI+   R+ E L ++    GV+  +      KH      ++A
Sbjct: 482 PYSNVFISGSWSGSLKVWKISDNLRSFELLGELSGAKGVVTKIQVVESGKHGKEKFRILA 541

Query: 426 GIGTEHRFGRW-KTIKGVKNTV--AIID 450
            I  EHR GRW   + G +N +  A+ID
Sbjct: 542 SIAKEHRLGRWIANVSGARNGIYSAVID 569

Involved in nucleolar processing of pre-18S ribosomal RNA. Required for efficient pre-rRNA cleavage at sites A0, A1 and A2, and biosynthesis of 18S rRNA.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1

 Score =  101 bits (251), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 24/327 (7%)

Query: 107  LETVVLEQEGKLRVNIAD----RLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACK 162
            + +VV   +G +  + +D    RL + +     +  + H + +  +  + D   + S   
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGD 1094

Query: 163  DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS-SSL 221
            D I+  W       + S   + T +     +  L  + N   +A+G ++  ++LW  SS 
Sbjct: 1095 DQIVRLW------DISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSK 1148

Query: 222  EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI 281
            + L+T  GH   +  +A S +  TL S S D+++++W+I     +  L GH S + S+  
Sbjct: 1149 KCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVF 1208

Query: 282  LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSL 339
                  ++SG +D++VR+W+I     L  F GH+  ++      D   +  G  D T+ L
Sbjct: 1209 NPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRL 1268

Query: 340  WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
            W I      HT              NW+ SVA   +  ++ASGS D  V+LW+I+  + L
Sbjct: 1269 WDISSSKCLHTF---------QGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCL 1319

Query: 400  EFLQDIPLSGVINSLVFTSDHKHLVAG 426
               Q    +  ++S+ F+ D   L +G
Sbjct: 1320 HTFQG--HTSWVSSVTFSPDGTMLASG 1344

Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690)

>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1

 Score = 97.8 bits (242), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/301 (25%), Positives = 133/301 (44%), Gaps = 21/301 (6%)

Query: 129  ATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK 188
            A+  CT+   + H   +  +A + D + V S   D  I  W  +  S  C+    +T   
Sbjct: 913  ASGTCTQ-TLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW--DAASGTCT----QTLEG 965

Query: 189  SYPPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISFECDTLY 247
                +L++A + + + VASG  +  IK+W ++S     T  GH   +  +A S +   + 
Sbjct: 966  HGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA 1025

Query: 248  SSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW-KIQEES 306
            S S+D++IK+W+       +TL GH   + S+      + ++SG  D ++++W  +    
Sbjct: 1026 SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTC 1085

Query: 307  QLVFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN 365
                 GH   +       D Q +  G  DGT+ +W       T T+   HG         
Sbjct: 1086 TQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE-GHG--------G 1136

Query: 366  WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVA 425
            W+ SVA   +   VASGS DG +K+W        + L+     G + S+ F+ D + + +
Sbjct: 1137 WVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEG--HGGWVQSVAFSPDGQRVAS 1194

Query: 426  G 426
            G
Sbjct: 1195 G 1195

Responsible for vegetative incompatibility through specific interactions with different alleles of the unlinked gene, het-c.

Podospora anserina (taxid: 5145)

>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1

 Score = 95.5 bits (236), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 121/246 (49%), Gaps = 26/246 (10%)

Query: 201 NNELVASGDNNSNIKLWSSSLEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
           +  L+A+G ++  + LWS +  + + + TGH +P+  + ++   + + + S   SI+VW+
Sbjct: 32  SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91

Query: 260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV-FNGHSRGID 318
           +E    + TL GH++ I SLD       ++SG  D ++++W I+ +  +  + GHS+ + 
Sbjct: 92  LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 319 MTRRVNDQQFI-TCGEDGTLSLWSI-----LKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
             R   D +++ +  +D T+ LW +     + + P HT PV               +V  
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV---------------NVVE 196

Query: 373 LH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431
            H N  L+ASGS D  ++ W +   + +  ++  P  G + S++F  D   L +G     
Sbjct: 197 FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQDSL 254

Query: 432 RFGRWK 437
           R   W+
Sbjct: 255 RVYGWE 260

Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth.

Homo sapiens (taxid: 9606)

>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1

 Score = 95.5 bits (236), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 121/246 (49%), Gaps = 26/246 (10%)

Query: 201 NNELVASGDNNSNIKLWSSSLEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
           +  L+A+G ++  + LWS +  + + + TGH +P+  + ++   + + + S   SI+VW+
Sbjct: 32  SGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWD 91

Query: 260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV-FNGHSRGID 318
           +E    + TL GH++ I SLD       ++SG  D ++++W I+ +  +  + GHS+ + 
Sbjct: 92  LEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVR 151

Query: 319 MTRRVNDQQFI-TCGEDGTLSLWSI-----LKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
             R   D +++ +  +D T+ LW +     + + P HT PV               +V  
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV---------------NVVE 196

Query: 373 LH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431
            H N  L+ASGS D  ++ W +   + +  ++  P  G + S++F  D   L +G     
Sbjct: 197 FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP--GPVRSVLFNPDGCCLYSGCQDSL 254

Query: 432 RFGRWK 437
           R   W+
Sbjct: 255 RVYGWE 260

Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth.

Mus musculus (taxid: 10090)

>sp|Q4WT34|PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=prp46 PE=3 SV=1

 Score = 91.7 bits (226), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 117/250 (46%), Gaps = 17/250 (6%)

Query: 193 ILALAVANNNELVASGDNNSNIKLWSSSLEHLH-TFTGHKAPITGLAISFECDTLYSSSN 251
           + +LAV  NNE  ASG  +  IK+W+ +   L  T TGH + + GLA+S     L+S   
Sbjct: 147 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGE 206

Query: 252 DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VF 310
           D+ +K W++E    +    GH S + +L +  +  ++ +GG D   RVW ++  S + V 
Sbjct: 207 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVL 266

Query: 311 NGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS 369
           +GH   + D+  +  D Q IT   D T+ LW +       T+ V   +         + +
Sbjct: 267 SGHKGTVADLKCQEADPQIITGSLDATVRLWDL---AAGKTMGVLTHHKKG------VRN 317

Query: 370 VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-LSGVINSLVFTSDHKHLVAGIG 428
           +A +H  +   + +  G +K WK       +F+Q+    + VINSL    D+     G  
Sbjct: 318 LA-IHPREFTFASASTGSIKQWKCPEG---DFMQNFEGHNAVINSLAVNEDNVLFSGGDN 373

Query: 429 TEHRFGRWKT 438
               F  WKT
Sbjct: 374 GSMCFWDWKT 383

Involved in pre-mRNA splicing and required for cell cycle progression at G2/M.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|Q5BE22|PRP46_EMENI Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prp46 PE=3 SV=1

 Score = 91.7 bits (226), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 17/250 (6%)

Query: 193 ILALAVANNNELVASGDNNSNIKLWSSSLEHLH-TFTGHKAPITGLAISFECDTLYSSSN 251
           + +LAV  NNE  ASG  +  IK+W+ +   L  T TGH + + GLA+S     L+S   
Sbjct: 146 VRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGE 205

Query: 252 DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VF 310
           D+ +K W++E    +    GH S + +L +  +  ++ +GG D   RVW ++  S + V 
Sbjct: 206 DKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVL 265

Query: 311 NGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS 369
           +GH+  + D+  +  D Q IT   D T+ LW +       T+ V   +         I S
Sbjct: 266 SGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAG---KTMGVLTHHKKG------IRS 316

Query: 370 VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIG 428
           +A  H  +   + +  G +K WK       EF+Q+    + +IN+L    D+     G  
Sbjct: 317 LAT-HPREFTFASASTGSIKQWKCPGG---EFMQNFEGHNAIINTLSVNEDNVLFSGGDN 372

Query: 429 TEHRFGRWKT 438
               F  WKT
Sbjct: 373 GSMSFWDWKT 382

Involved in pre-mRNA splicing and required for cell cycle progression at G2/M.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
321475660	458	hypothetical protein DAPPUDRAFT_307893 [	0.973	0.965	0.419	1e-91
91082577	451	PREDICTED: similar to U3 small nucleolar	0.960	0.966	0.412	6e-89
195056690	481	GH22986 [Drosophila grimshawi] gi|193899	0.982	0.927	0.383	6e-89
340710984	455	PREDICTED: u3 small nucleolar RNA-intera	0.955	0.953	0.409	7e-89
350400700	455	PREDICTED: U3 small nucleolar RNA-intera	0.973	0.971	0.410	1e-88
383852181	453	PREDICTED: U3 small nucleolar RNA-intera	0.973	0.975	0.407	6e-88
317418538	482	U3 small nucleolar RNA-interacting prote	0.991	0.933	0.422	6e-88
410919795	477	PREDICTED: U3 small nucleolar RNA-intera	0.859	0.817	0.445	1e-87
225714048	474	U3 small nucleolar RNA-interacting prote	0.964	0.924	0.427	1e-87
380014860	429	PREDICTED: U3 small nucleolar RNA-intera	0.896	0.948	0.430	1e-87

>gi|321475660|gb|EFX86622.1| hypothetical protein DAPPUDRAFT_307893 [Daphnia pulex]

 Score =  343 bits (879), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 194/463 (41%), Positives = 284/463 (61%), Gaps = 21/463 (4%)

Query: 1   MSFFIR-NKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQD 59
           MSFFIR N++ A   N +  +  R     P   K+  +   D+E++S  + E     + D
Sbjct: 1   MSFFIRKNQRGAKRKNGATVTDSR-----PKTYKEKKRLAHDDEISSHSEGE-----NDD 50

Query: 60  FEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSK-DKHVLK-KLETVVLEQEGK 117
            + +SE E++ T QE+++ L K+Y++EIE  E+ +  +   DK ++  +L+  +LEQ G+
Sbjct: 51  SKVYSESEDEETVQEKRLRLTKEYIQEIENQERLRREEEDIDKSIIAHRLKEDLLEQSGR 110

Query: 118 LRVNIADRLANATVVCTK-FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK 176
           LR  +AD          K  + K H+  ITC+ ++ D + +++A KD  I+KW L    K
Sbjct: 111 LRRTVADSYDKIDETLIKHLHCKDHKQPITCLTISPDCQSLFTASKDCTIVKWSLVEFKK 170

Query: 177 VCSSPFV--KTDR--KSYPPIL-ALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGH 230
           V     V  K  R  K +  ++ +L ++++ + +ASGD  + + +W   +L+ LHTF GH
Sbjct: 171 VAVIKRVEKKASREIKGHKTVVQSLTISSDGKFLASGDLENQVHIWDPITLKWLHTFKGH 230

Query: 231 KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS 290
           +A ITGL       TLYS+S DR++K+WN+++ +YVETL GHQ AITS+D L K R I++
Sbjct: 231 RAGITGLVFRRGTHTLYSASMDRTVKIWNLDEMSYVETLLGHQDAITSIDALTKERAITA 290

Query: 291 GGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHT 350
           GG D SVRVWKI EESQL+FNGH   ID  R VN+  F++CG+DG LSLW   KK P  +
Sbjct: 291 GGRDNSVRVWKIPEESQLIFNGHQGSIDCVRLVNEDHFVSCGDDGMLSLWGSQKKKPLFS 350

Query: 351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSG 409
           IP AHG D S+++ NWI+SVA L N+DL+ASGS DG ++LWK     R L  L  +P  G
Sbjct: 351 IPNAHGVDESNNQANWISSVAALTNTDLIASGSQDGFIRLWKCGENFRNLSPLMSVPACG 410

Query: 410 VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
            +NSL F+SD K L+AG+G EHR GRW      KN + II ++
Sbjct: 411 FVNSLAFSSDGKMLIAGLGQEHRLGRWWRNGSAKNEILIIPLK 453

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082577|ref|XP_966896.1| PREDICTED: similar to U3 small nucleolar RNA-interacting protein 2 (U3 small nucleolar ribonucleoprotein-associated 55 kDa protein) (U3 snoRNP-associated 55 kDa protein) (U3-55K) (RRP9 homolog) [Tribolium castaneum] gi|270015017|gb|EFA11465.1| hypothetical protein TcasGA2_TC014174 [Tribolium castaneum]

 Score =  334 bits (856), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 192/466 (41%), Positives = 294/466 (63%), Gaps = 30/466 (6%)

Query: 1   MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQDF 60
           MSFFI++K    T   S   K+RK   +P  SK       +EE+TS ED++       + 
Sbjct: 1   MSFFIKSKSINGTAKFS-ADKRRKRRAEPASSK-------NEEVTSSEDEDS----DHNL 48

Query: 61  EEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSK-DKHVL-KKLETVVLEQEGKL 118
            E SE E + T QE+K+ LAK YLEEIE+ E+ +L D +  K V+ ++L+T  L+Q GK 
Sbjct: 49  AEESEDEHE-TAQEKKLRLAKVYLEEIEREEQRRLQDKEVSKEVISERLKTDHLKQIGKY 107

Query: 119 RVNIADRLANATVVCTK-FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
           R+ IAD+         K    +  + +ITC+ ++SD   V+S  KDGI++KW L+   K 
Sbjct: 108 RITIADKYQGVDQSNYKVLKCREQQNTITCLCLSSDDNWVFSGSKDGIVVKWSLKENKKF 167

Query: 178 CSSPFVKTDRKSYPP----ILALAVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKA 232
              PFVK + +        I ++A++ +++ +  GD+++ I++W   +L+H+ T  GHK 
Sbjct: 168 GIIPFVKVNVEQVKGHTGCIYSIAISTDSKFLVVGDSSNLIQVWDPQTLQHVSTLKGHKK 227

Query: 233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG 292
           P+T L +     TLYS+S+DRS++VW +++ A+VETLFGHQ  ITS+D+L  ++ +SSGG
Sbjct: 228 PVTALCLKHNSHTLYSASSDRSVRVWTLDEMAFVETLFGHQDGITSIDVLNSDKPLSSGG 287

Query: 293 TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP 352
            D +VR+WK+ EESQL+FN H   ID  + ++DQ F++ G+DG +S+WS LKK P   + 
Sbjct: 288 RDGTVRLWKVSEESQLIFNAHPGNIDCVKWISDQYFVSGGDDGQVSVWSCLKKKPISCVK 347

Query: 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-----DIPL 407
            AHG DSS+++P WI++V    +SD++ASGS DG ++LWK+  K    FLQ     +IP+
Sbjct: 348 AAHGVDSSNNQPFWISAVGSHVHSDVIASGSQDGFLRLWKLENK----FLQITKLFEIPV 403

Query: 408 SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQL 453
            G IN+L FTSD + LV G+G +HR GRW T+K   N++ +I +Q+
Sbjct: 404 PGFINALAFTSDGRKLVVGVGRDHRLGRWNTVKSAVNSIHVIPLQI 449

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195056690|ref|XP_001995144.1| GH22986 [Drosophila grimshawi] gi|193899350|gb|EDV98216.1| GH22986 [Drosophila grimshawi]

 Score =  334 bits (856), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 184/480 (38%), Positives = 287/480 (59%), Gaps = 34/480 (7%)

Query: 2   SFFIRNKKPAATNNNSLKSK------KRKFSEKP-----------TKSKKTVKPDLDEEL 44
           SFF+   KP A    + K K      K K S KP            K ++  K D DEE+
Sbjct: 4   SFFL---KPGAAKQANKKRKINATKAKGKLSSKPGKRTQNATNAPPKKQRRAKAD-DEEI 59

Query: 45  TSDEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSK-DKHV 103
            SDE++   G  +  +    E  E+ T Q++++ LAKKYLEEIEK E +++ D    + V
Sbjct: 60  ASDEEEYDSGNKTLVYSTDEEGVEEETAQDKRLRLAKKYLEEIEKQEADRVEDRDLSQSV 119

Query: 104 LKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKD 163
            ++L+T  L+  G+LR NIA  + + ++ C   N + H + I  +A+++D +H+Y   K 
Sbjct: 120 EQRLQTEYLDSVGRLRRNIAATIKSCSIQCALKN-RLHHSPICALALSADGRHLYVGAKS 178

Query: 164 GIIIKWLLETRSKVCSSPFVK-------TDRKSYPPILALAVANNNELVASGDNNSNIKL 216
             ++KW  E+  KV     V+       T +K    + ++ ++ + + +A  +  ++I++
Sbjct: 179 QFVLKWCTES-GKVLDKLDVQPHRDEPETGKKRRSHVTSICLSTDMKYLALAEGGAHIQI 237

Query: 217 WS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA 275
           W   ++ HL TF GH+  +TGL        LYS++ DRS+K+W++++ AYVE+LFGHQ+A
Sbjct: 238 WCPQTMRHLKTFKGHRDSVTGLVFRKATHELYSAAKDRSVKIWSLDEMAYVESLFGHQTA 297

Query: 276 ITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDG 335
           +TS+D L++ R IS+GG+D S+R+WKI EESQL++NGH  GI+  + +ND+ F++ G DG
Sbjct: 298 VTSIDALSRERAISAGGSDCSLRIWKITEESQLIYNGHRDGIECVKLINDEHFVSGGVDG 357

Query: 336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395
            +SLWS LKK P  T  +AHG    +   NWIT++A + N+DLVA+GS DGCV+LW+  P
Sbjct: 358 AISLWSALKKKPICTAQLAHG-KGENEVANWITAIAVVVNTDLVATGSCDGCVRLWQSNP 416

Query: 396 K-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK 454
             R L+ +Q I ++G IN L F  D   L   +G EHR GRW   K  KN++ +IDI+L+
Sbjct: 417 NARKLQEIQSISIAGFINGLTFNGDGTKLFVAVGQEHRLGRWWRHKEAKNSIVVIDIKLQ 476

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710984|ref|XP_003394062.1| PREDICTED: u3 small nucleolar RNA-interacting protein 2-like [Bombus terrestris]

 Score =  333 bits (855), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 191/466 (40%), Positives = 284/466 (60%), Gaps = 32/466 (6%)

Query: 1   MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVK-----PDLDEELTSDEDDEGIGF 55
           MSFFIRNK+ +          KRKF+       KT K     PD D E  +  D+E    
Sbjct: 1   MSFFIRNKQGSG-------GIKRKFNGYTKTKGKTKKINKSIPD-DNESIASTDEELAEE 52

Query: 56  DSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQE 115
           + +  EE+   EE+ T QE++V LAKKYL+ IE+ E+++  + ++  V ++L+   LE++
Sbjct: 53  NQRRNEEYESEEEEETAQEKRVRLAKKYLQHIEEEERDRA-EFEEGAVARRLQEEYLEEK 111

Query: 116 GKLRVNIADRLAN----ATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLL 171
           G+LR  +A    N      + C     K H++SITC+ ++S+ K +YS  KDG ++KW L
Sbjct: 112 GRLRKTVASNYINHGEPIVLKC-----KEHKSSITCLCLSSNGKFLYSGSKDGSLVKWCL 166

Query: 172 ETRSKVCSSPFVKTDRKS---YPPILALAVANNNELVASGDNNSN--IKLWSSSLEHLHT 226
           + R+K+     VK  RKS      +  LA++ + + + +GD+     +     +L H+  
Sbjct: 167 KERAKL---KAVKGKRKSEAGMKCVQCLAISTDGKFLVAGDSGCKHILVFCGDTLNHIKN 223

Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
             GH+  +T L    +  TLYS S DRS+KVWN+ D AYVE+LFGHQ+ +TS+D LA+ R
Sbjct: 224 LQGHRDSVTSLVFRRDTHTLYSGSKDRSVKVWNLSDMAYVESLFGHQNGVTSIDALARER 283

Query: 287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV 346
            I+SGG D ++R+WKI EESQL+FNGH   ID  + +N++ F +CG+DG L +W  LKK 
Sbjct: 284 AITSGGFDGTIRIWKIVEESQLIFNGHGGSIDTVKLINEEHFFSCGDDGQLCVWGCLKKK 343

Query: 347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDI 405
           P  ++  AHG D S+++P WI+S+A L N+DLVASGS +G ++LW+     R+L  L +I
Sbjct: 344 PLCSVADAHGRDESNNQPMWISSIATLLNTDLVASGSRNGVIRLWQCGDSFRSLNPLFEI 403

Query: 406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
            L+G +N+L FTSD   L+AGIG EHR GRW  I   KN++ II +
Sbjct: 404 QLTGFVNALCFTSDGTQLIAGIGQEHRLGRWWRISEAKNSIVIIPL 449

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350400700|ref|XP_003485928.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Bombus impatiens]

 Score =  333 bits (853), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 188/458 (41%), Positives = 283/458 (61%), Gaps = 16/458 (3%)

Query: 1   MSFFIRNKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQDF 60
           MSFFIRNK+ +      +K K   +++   K+KK  KP  D+  +    DE +  ++Q  
Sbjct: 1   MSFFIRNKQGSG----GIKRKFNGYTKTKGKTKKINKPVPDDNESIASTDEELAEENQRR 56

Query: 61  EEHSEVEEDL-TEQERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLR 119
            E  E EE+  T QE++V LAK+YL+ IE+ E+++  + ++  V ++L+   LE++G+LR
Sbjct: 57  NEEYESEEEEETAQEKRVRLAKQYLQHIEEEERDRA-EFEEGAVARRLQEEYLEEKGRLR 115

Query: 120 VNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS 179
             +A    N          K H++SITC+ ++S+ K +YS  KDG ++KW L+  +K+  
Sbjct: 116 KTVASNYINHGEPIV-LKCKEHKSSITCLCLSSNGKFLYSGSKDGSLVKWCLKEGAKL-- 172

Query: 180 SPFVKTDRKS---YPPILALAVANNNELVASGDNNSN--IKLWSSSLEHLHTFTGHKAPI 234
              VK  RKS      +  LA++ + + + +GD+     +     +L H+    GH+  +
Sbjct: 173 -KAVKGKRKSEAGMKCVQCLAISTDGKFLVAGDSGCKHILVFCGDTLNHIKNLQGHRDSV 231

Query: 235 TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD 294
           T L    +  TLYS SNDRS+KVWN+ D AYVE+LFGHQ+ +TS+D LA+ R ISSGG D
Sbjct: 232 TSLVFRRDTHTLYSGSNDRSVKVWNLGDMAYVESLFGHQNGVTSIDALARERAISSGGFD 291

Query: 295 KSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVA 354
            ++R+WKI EESQL+FNGH   ID  + +N++ F +CG+DG L +W  LKK P  ++  A
Sbjct: 292 GTIRIWKIVEESQLIFNGHGGSIDTVKLINEEHFFSCGDDGQLCVWGCLKKKPLCSVLDA 351

Query: 355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINS 413
           HG D S+ +P WI+S+A L N+DLVASGS +G ++LW+     R+L  L +I L+G +N+
Sbjct: 352 HGRDESNGQPMWISSIATLLNTDLVASGSRNGVIRLWQCGDSFRSLNPLFEIQLTGFVNA 411

Query: 414 LVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
           L FTSD   L+AGIG EHR GRW  I   KN++ II +
Sbjct: 412 LCFTSDGTRLIAGIGQEHRLGRWWRISEAKNSIVIIPL 449

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383852181|ref|XP_003701607.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Megachile rotundata]

 Score =  331 bits (848), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 186/457 (40%), Positives = 283/457 (61%), Gaps = 15/457 (3%)

Query: 1   MSFFIRNKKPAATNNNSLKSKKRKFS--EKPTKSKKTVK-PDLDEELTSDEDDEGIGFDS 57
           MSFFIRNK+  +         KRKF+     +K KK VK P  D+  +    DE +  ++
Sbjct: 1   MSFFIRNKQGGS-------GAKRKFNGHAGSSKGKKNVKKPVADDNESIASTDEELAEEN 53

Query: 58  QDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGK 117
              E +   EE+ T QE+++  AK+YLE+IE+ E+++  + ++  V K+L    LE++G+
Sbjct: 54  HRHEVYESEEEEETAQEKRIRYAKQYLEQIEEEERDRA-EFEEGAVTKRLREEYLEEKGR 112

Query: 118 LRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
           LR  +A +  N          K H++SITCI ++S+   +YS  KDG ++KW L+ R+K+
Sbjct: 113 LRKTVASKYINHGEPIV-LRCKEHKSSITCICLSSNGNFLYSGSKDGSLVKWCLKERTKL 171

Query: 178 CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN-IKLWSS-SLEHLHTFTGHKAPIT 235
                    ++    +  +A++ + + +A GD+    IK++S  +L+H+    GH+  +T
Sbjct: 172 KVVKRKMKTQEGMKSVRCMAISTDGKFLAVGDSGCKEIKVFSGDTLDHIKNLQGHRDIVT 231

Query: 236 GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK 295
           GL       TLYS+S DRS+KVW+++D AYVE+LFGHQS ITS+D L + R I+SGG D 
Sbjct: 232 GLVFRKSTHTLYSASEDRSVKVWSLDDMAYVESLFGHQSGITSIDALVRERAITSGGFDG 291

Query: 296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH 355
           +VR+WKI EESQL+FNGH   ID  + +N++ F +CG+DG L +W  LKK P  ++P AH
Sbjct: 292 TVRIWKIVEESQLIFNGHGGTIDCVKLINEENFFSCGDDGQLCVWGCLKKKPLCSVPDAH 351

Query: 356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSL 414
           G D ++++P WI+S+A L N+DLVASGS +G ++LW+     R+L  L +I L G IN+L
Sbjct: 352 GRDETNNQPMWISSIATLLNTDLVASGSRNGVIRLWQCGDSFRSLNPLFEIHLVGFINAL 411

Query: 415 VFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
            FT D   L+AG+G EH  GRW  I   KN++ II +
Sbjct: 412 CFTPDGTQLIAGVGQEHSLGRWWRIPEAKNSIVIIPL 448

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|317418538|emb|CBN80576.1| U3 small nucleolar RNA-interacting protein 2 [Dicentrarchus labrax]

 Score =  331 bits (848), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 199/471 (42%), Positives = 293/471 (62%), Gaps = 21/471 (4%)

Query: 2   SFFIR---NKKPAATNNNSLKSKKRKFSEKPTKSK---KTVKPDLDEELTSDEDDEG-IG 54
           SFFI+   N K      N+   K++   +   KSK   K V    +EE++SD D E  + 
Sbjct: 4   SFFIKTKQNPKFVKKGKNTEAPKRKGDGDSGGKSKVRVKKVTSKYNEEISSDSDTESPVV 63

Query: 55  FDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDS--KDKHVLKKLETVVL 112
              +  +E +E EE  T QE+K+ LAK YL+++++ E++K  D   +   +  +L+  VL
Sbjct: 64  PKKRQSKEENEYEE--TPQEKKLRLAKVYLDQLKEEEEKKAEDDSFETDLIAGRLQEEVL 121

Query: 113 EQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLE 172
           EQ+GKL+  IA  L        +   + H+  ITC+ +TSD K+++SA KD  IIKW +E
Sbjct: 122 EQKGKLQRLIAKDLMPPDASEIRVL-RGHKLPITCLVITSDDKYIFSAAKDCSIIKWDVE 180

Query: 173 TRSKVCSSPFVKT---DRK--SYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHT 226
           +  K+ + P  +    DR       IL ++V+++ + +A+GD N  I +W   + +HL+ 
Sbjct: 181 SGKKLHTIPGGRKGTEDRHVGHTAHILCISVSSDGKYLATGDMNKLIMIWEGETCKHLYK 240

Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
           FTGHK P++GL+       LYS+S+DRSIKVWN+++ AYVETLFGHQ AIT LD L++ R
Sbjct: 241 FTGHKGPVSGLSFRKGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDSLSRER 300

Query: 287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV 346
            +++GG D+SVRVWKI EESQLVF+GH   ID  + +N++  IT  +DG++SLWS+ KK 
Sbjct: 301 CVTAGGRDRSVRVWKIAEESQLVFHGHEGSIDCIQLINEEHMITGADDGSVSLWSVNKKK 360

Query: 347 PTHTIPVAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQ 403
           P  T+  AHG   D+   +P+W++SVA L NSD VASGS++  V+LWK     R LE L 
Sbjct: 361 PLSTVKQAHGCHGDAGIEQPHWVSSVAALQNSDTVASGSHNSQVQLWKCGQYYRGLEPLF 420

Query: 404 DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK 454
            IP+ G +NSL F+S  + +VAG+G EHR GRW  IK  KN + +I ++ K
Sbjct: 421 SIPVCGFVNSLKFSSSGQFMVAGVGQEHRLGRWWRIKEAKNGIYVIPLKRK 471

Source: Dicentrarchus labrax

Species: Dicentrarchus labrax

Genus: Dicentrarchus

Family: Moronidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410919795|ref|XP_003973369.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Takifugu rubripes]

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 180/404 (44%), Positives = 261/404 (64%), Gaps = 14/404 (3%)

Query: 62  EHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDS--KDKHVLKKLETVVLEQEGKLR 119
           E  E EE  T QE+K+ LAK Y++++++ E++K +D   +   V  +L+  VLEQ+GKL+
Sbjct: 70  EEQEYEE--TPQEKKLRLAKLYIDQLKEEEEQKADDETFESDLVAGRLQEEVLEQKGKLQ 127

Query: 120 VNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS 179
             IA  L        +   + H+  ITC+ +TSD KH++SA KD  IIKW +E+  K+  
Sbjct: 128 RPIAKDLLPPDASDIRLL-RGHKLPITCLVITSDDKHIFSAAKDCSIIKWDVESGKKLHK 186

Query: 180 SPFVKT---DRK--SYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAP 233
            P  +    DR       IL +AV+++ + +A+GD N  I +W + + +HL+ FTGHK P
Sbjct: 187 IPGGRKGTEDRHVGHTGHILCMAVSSDAKYLATGDMNKLIMIWEAETCKHLYKFTGHKGP 246

Query: 234 ITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT 293
           ++GL+       LYS+S+DRS+KVWN+++ AYVETLFGHQ AIT LD L++ R +++GG 
Sbjct: 247 VSGLSFRRGSHDLYSASHDRSVKVWNVDENAYVETLFGHQDAITGLDCLSRERCVTTGGR 306

Query: 294 DKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353
           D+SVRVWKI EESQLVF+GH   ID  + +N++  IT  +DG++ LWS+ +K P  T+  
Sbjct: 307 DRSVRVWKIAEESQLVFHGHEGSIDCVQLINEEHMITGADDGSVCLWSVNRKKPLSTVKQ 366

Query: 354 AHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGV 410
           AHG   D+   +P+W+ SVA L NSD VASGS++  V+LWK     R LE L  IP+ G 
Sbjct: 367 AHGCHGDAGLEQPHWVASVAALQNSDTVASGSHNSLVQLWKCAQNFRGLEPLFSIPVPGF 426

Query: 411 INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK 454
           +NSL F+S  + LVAG+G EHR GRW  IK  KN + II ++ +
Sbjct: 427 VNSLKFSSSGRFLVAGVGQEHRLGRWWRIKEAKNGIYIIPLKRR 470

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|225714048|gb|ACO12870.1| U3 small nucleolar RNA-interacting protein 2 [Lepeophtheirus salmonis]

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 197/461 (42%), Positives = 289/461 (62%), Gaps = 23/461 (4%)

Query: 1   MSFFIR-NKKPAATNNNSLKSKKRKFSEKPTKSKKTVKPDLDEELTSDEDDEGIGFDSQD 59
           M+FF++   +P A        KKRK +  P  SKK    + +EE+ SD+ D  +G DS D
Sbjct: 1   MTFFMKKGSRPGA--------KKRKLNGAPESSKKKGFEE-NEEILSDDSDV-MGHDS-D 49

Query: 60  FEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEK-LNDSKDKHVLKKLETVVLEQEGKL 118
            E H++ +++ T  ++++ LAK YLEEIE+ EKE+ + D     V ++L T  LE++GKL
Sbjct: 50  IESHTDEDDEETSDQKRIRLAKMYLEEIEREEKERGVEDEIRDSVNERLMTDALEEKGKL 109

Query: 119 RVNIADRLANA-TVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
              +A  L         K   K H  SIT IA ++D  H+Y+A K+G +I+W L+  SK+
Sbjct: 110 FRAVASSLRPIFPSESRKLKDKLHNGSITSIACSND--HIYTASKNGGLIQWRLKDLSKI 167

Query: 178 CS-SPFVKTDRKSY----PPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHK 231
               P  K D K++      I ALAV+ + + +ASG  + NI +W  +++EHLHTF GH+
Sbjct: 168 KKIVPGRKKDLKTHVGHCGTIHALAVSTDGKYLASGGEHDNIHIWDGNTMEHLHTFKGHR 227

Query: 232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
             I+GL       TL+S S DRS+KVWN+++  Y+E+LFGHQ  IT +D   + R ++SG
Sbjct: 228 DMISGLVFRVNSHTLFSCSFDRSVKVWNLDEMTYIESLFGHQDKITGIDAGRRERAVTSG 287

Query: 292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
           G D S+RVWKI EESQLVFN  S   D  + +N++ F+TCGEDG +SLW +++K P  T 
Sbjct: 288 GRDGSIRVWKIVEESQLVFNRPSSSTDSVKLINEEHFVTCGEDGHISLWGVMRKKPLFTY 347

Query: 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGV 410
             AHG DS + +P WI+S+A L  SDL+ASGS DG ++LW+ T   R L+ +Q IP++G 
Sbjct: 348 QKAHGLDSINQQPMWISSIATLPQSDLIASGSRDGFIRLWRCTANFRGLKEIQAIPVTGF 407

Query: 411 INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
           +N+L F+ D K L+AGIG EHR GRW  IK  +N++ ++ +
Sbjct: 408 VNALQFSPDGKTLLAGIGQEHRLGRWWRIKEARNSILVLPL 448

Source: Lepeophtheirus salmonis

Species: Lepeophtheirus salmonis

Genus: Lepeophtheirus

Family: Caligidae

Order: Siphonostomatoida

Class: Maxillopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014860|ref|XP_003691434.1| PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Apis florea]

 Score =  330 bits (845), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 181/420 (43%), Positives = 268/420 (63%), Gaps = 13/420 (3%)

Query: 38  PDLDEELTSDEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLND 97
           PD +E + S   DE I  ++Q  EE+   EE+ T QE+++ LAK+YL +IE+ EK++  +
Sbjct: 11  PDDNESIAST--DEEIAEENQRDEEYESEEEEETAQEKRIRLAKQYLAQIEEEEKDRA-E 67

Query: 98  SKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHV 157
            ++  + K+L    LE++G+LR  +A    N          K H++SITC+ ++S+ K +
Sbjct: 68  FEEGAITKRLHEEYLEEKGRLRKTVASNYINYGEPIV-LKCKEHKSSITCLCLSSNGKFL 126

Query: 158 YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI---LALAVANNNELVASGDNNS-N 213
           YS  KDG +IKW L+ R+K+     +K  RKS   I     LA++ +++ +  GDN S N
Sbjct: 127 YSGSKDGSLIKWCLKERTKL---KAIKGKRKSQDGIKCVQCLAISTDSKFLVVGDNGSKN 183

Query: 214 IKLW-SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH 272
           I ++  ++L H+    GH+  IT L    E  TLYS S DRS+KVWN++D AYVE+LFGH
Sbjct: 184 IMVFCGNTLNHIKNLQGHRGNITCLVFRKETHTLYSGSEDRSVKVWNLDDMAYVESLFGH 243

Query: 273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCG 332
           Q+ ITS+D L + R I+SGG D ++R+WKI EESQL+FNGH   ID  + +N++ F++CG
Sbjct: 244 QNGITSIDALTRERAITSGGFDGTIRIWKIVEESQLIFNGHGSSIDTVKLINEEHFLSCG 303

Query: 333 EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK 392
            DG L +W  LKK P  ++  AHG D S+++P WI+S+A L N+DLVASGS +G ++LW+
Sbjct: 304 ADGQLCVWGCLKKKPLCSVLDAHGRDKSNNQPMWISSIATLLNTDLVASGSQNGVIRLWQ 363

Query: 393 ITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
                R+L  L +I L+G +N+L FT D   L+AGIG EHR GRW  I   KN + +I +
Sbjct: 364 CGDSFRSLNPLFEIELTGFVNALCFTPDGTQLIAGIGQEHRLGRWWRIPEAKNVIVVIPL 423

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	454
UNIPROTKB|O43818	475	RRP9 "U3 small nucleolar RNA-i	0.854	0.816	0.408	7.5e-73
UNIPROTKB|I3LQS7	478	RRP9 "Uncharacterized protein"	0.852	0.809	0.404	3.2e-72
UNIPROTKB|F1MRM3	475	RRP9 "Uncharacterized protein"	0.856	0.818	0.394	6.7e-72
RGD|1307881	478	Rrp9 "ribosomal RNA processing	0.854	0.811	0.408	2.3e-71
FB|FBgn0053505	484	U3-55K "U3 small nuclear ribop	0.977	0.917	0.336	3.3e-70
MGI|MGI:2384313	475	Rrp9 "RRP9, small subunit (SSU	0.854	0.816	0.400	3.3e-70
UNIPROTKB|F1NIY8	364	F1NIY8 "Uncharacterized protei	0.662	0.826	0.410	1.9e-60
POMBASE|SPAC2E1P5.05	524	SPAC2E1P5.05 "U3 snoRNP-associ	0.310	0.269	0.407	5.9e-50
TAIR|locus:2127408	479	EMB2271 "AT4G21130" [Arabidops	0.784	0.743	0.311	9.8e-50
TAIR|locus:2115984	504	YAO "AT4G05410" [Arabidopsis t	0.605	0.545	0.268	9.1e-44

UNIPROTKB|O43818 RRP9 "U3 small nucleolar RNA-interacting protein 2" [Homo sapiens (taxid:9606)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 165/404 (40%), Positives = 233/404 (57%)

Query:    61 EEHSEVEEDLTEQERKVILAXXXXXXXXXXXXXXLNDS--KDKHVLKKLETVVLEQEGKL 118
             EE  E+EE  T QE+K+ LA                    ++  V  +L+  VLEQ G+L
Sbjct:    66 EEEEELEE--TAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRL 123

Query:   119 RVNIADRL-ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
             +  +A  + A A+       G  H+ SITC+ VT D   ++SA KD  IIKW +E+  K+
Sbjct:   124 QKLVAKEIQAPASADIRVLRG--HQLSITCLVVTPDDSAIFSAAKDCSIIKWSVESGRKL 181

Query:   178 CSSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLWSS-SLEHLHTFTGHK 231
                P  K   +  PP     +             SGD +  I +W + S +HL+TFTGH+
Sbjct:   182 HVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHR 241

Query:   232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
               ++GLA       LYS+S+DRS+KVWN+ + +YVETLFGHQ A+ +LD L++   +++G
Sbjct:   242 DAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAG 301

Query:   292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
             G D +VRVWKI EESQLVF GH   ID    +N++  ++  +DG+++LW + KK P    
Sbjct:   302 GRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQ 361

Query:   352 PVAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLS 408
               AHG   +    +P WI+SVA L N+DLVA+GS+  CV+LW+     R L+ L DIPL 
Sbjct:   362 REAHGLRGEPGLEQPFWISSVAALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLV 421

Query:   409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
             G INSL F+S    LVAG+G EHR GRW  IK  +N+V II ++
Sbjct:   422 GFINSLKFSSSGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

GO:0003723 "RNA binding" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0030532 "small nuclear ribonucleoprotein complex" evidence=TAS

GO:0005732 "small nucleolar ribonucleoprotein complex" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|I3LQS7 RRP9 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
 Identities = 163/403 (40%), Positives = 233/403 (57%)

Query:    61 EEHSEVEEDLTEQERKVILAXXXXXXXXXXXX--XXLNDSKDKHVLKKLETVVLEQEGKL 118
             EE  E+EE  T QE+K+ LA                  + ++  V  KL+  VLEQ G+L
Sbjct:    69 EEEEELEE--TAQEKKLRLAKLYLEQLKQQEEEKAEAREFEEDQVAGKLKEDVLEQRGRL 126

Query:   119 RVNIADRL-ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
             + ++A  + A A        G  H+ SITC+ +T D   ++SA KD  IIKW +E+  K+
Sbjct:   127 QKSVAKEIQAPAPADIRILRG--HQLSITCLVITPDDLAIFSAAKDCTIIKWSVESGRKL 184

Query:   178 CSSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLWSS-SLEHLHTFTGHK 231
                P  K   +  PP     I             SGD +  I +W + S  HL+TFTGH+
Sbjct:   185 HVIPRAKKGAEGQPPGHSSHILCMAISSDGKYLASGDRSKLILIWEAQSCRHLYTFTGHR 244

Query:   232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
               ++GLA       LYS+S+DRS+KVWN+ + +YVETLFGHQ A+ +LD L++   +++G
Sbjct:   245 DAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAG 304

Query:   292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
             G D +VRVWKI EESQLVF GH   ID  + +N++  ++  +DG+++LW + KK P    
Sbjct:   305 GRDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLALQ 364

Query:   352 PVAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLS 408
               AHG   +    +P W++SVA L N+DL+A+GS++  V+LW+     R L+ L DIPL 
Sbjct:   365 REAHGLRGEQGLEQPFWVSSVAALLNTDLIATGSHNNSVRLWQCGEGFRQLDLLCDIPLV 424

Query:   409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451
             G INSL F+S    LVAG+G EHR GRW  IK  +N+V II +
Sbjct:   425 GFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPL 467

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MRM3 RRP9 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 159/403 (39%), Positives = 234/403 (58%)

Query:    61 EEHSEVEEDLTEQERKVILAXXXXXXXXXXXX--XXLNDSKDKHVLKKLETVVLEQEGKL 118
             EE  E+EE  T QE+K+ LA                  + ++  V  +L+  VLEQ G+L
Sbjct:    66 EEEEELEE--TAQEKKLRLAKVYLEQLRQQEEEKAEAREFEEDQVAGRLKEDVLEQRGRL 123

Query:   119 RVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC 178
             + ++A  +        +   + H+ SITC+ VT D   ++SA KD  IIKW +E+  K+ 
Sbjct:   124 QKSVAKEIQAPDPADIRIL-RGHQLSITCLVVTPDDLAIFSAAKDCTIIKWSVESGRKLH 182

Query:   179 SSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLWSS-SLEHLHTFTGHKA 232
               P  K   +  PP     +             SGD +  I +W + S +HL+TFTGH+ 
Sbjct:   183 VIPRAKKGTEGQPPGHSTHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRD 242

Query:   233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG 292
              ++GLA       LYS+S+DRS+KVWN+ + +YVETLFGHQ A+ +LD L++   +++GG
Sbjct:   243 AVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCVTAGG 302

Query:   293 TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP 352
              D +VRVWKI EESQLVF GH   ID  + +N++  ++  +DG+++LW + KK P     
Sbjct:   303 RDGTVRVWKIPEESQLVFYGHQGSIDSIQLINEEHMVSGADDGSVALWGLSKKRPLALQR 362

Query:   353 VAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSG 409
              AHG   +    +P W++SVA L N+DLVA+GS++  V+LW+     R L+ L DIPL G
Sbjct:   363 EAHGLRGEPGLEQPFWVSSVAALLNTDLVATGSHNNSVRLWQCGEGFRQLDLLYDIPLVG 422

Query:   410 VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
              +NSL F+S    LVAG+G EHR GRW  IK  +N+V II ++
Sbjct:   423 FVNSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

GO:0005634 "nucleus" evidence=IEA

RGD|1307881 Rrp9 "ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)" [Rattus norvegicus (taxid:10116)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 165/404 (40%), Positives = 231/404 (57%)

Query:    61 EEHSEVEEDLTEQERKVILAXXXXXXXXXXXXXXLNDS--KDKHVLKKLETVVLEQEGKL 118
             EE  E+EE  T QE+K+ LA                    ++  V  +L+  VLEQ G+L
Sbjct:    69 EEEEELEE--TAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRL 126

Query:   119 RVNIADRL-ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
             +  +A  + A A        G  H+ SITC+ +T D   ++SA KD  IIKW +ET  K+
Sbjct:   127 QKLVAKEIQAPAPTDIRVLRG--HQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKL 184

Query:   178 CSSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLWSS-SLEHLHTFTGHK 231
                P  K   +  P      I             SGD +  I +W + S +HL+TFTGH+
Sbjct:   185 HVIPRAKKGTQGQPSGHSSHILCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHR 244

Query:   232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
               ++GLA       LYS+S+DRS+KVWN  + +YVETLFGHQ A+ +LD L++   +++G
Sbjct:   245 DAVSGLAFRRGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAG 304

Query:   292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
             G D +VRVWKI EESQLVF GH   ID    +N++  ++  +DG+++LW + KK P    
Sbjct:   305 GRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQ 364

Query:   352 PVAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLS 408
               AHG   +    +P WI+SVA L N+DLVA+GS++ CV+LW+     R L+ L DIPL 
Sbjct:   365 REAHGLHGEPGLEQPFWISSVAALLNTDLVATGSHNACVRLWQCGEGFRQLDPLCDIPLV 424

Query:   409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
             G INSL F+S    LVAG+G EHR GRW  IK  +N+V II ++
Sbjct:   425 GFINSLKFSSGGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 468

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

FB|FBgn0053505 U3-55K "U3 small nuclear riboprotein factor 55K" [Drosophila melanogaster (taxid:7227)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 153/455 (33%), Positives = 238/455 (52%)

Query:     9 KPAATNNNSLKSKKRKFSEKPTKSKKTVKPXXXXXXXXXXXXXGIGFDSQDFEEHSEVEE 68
             KP        KS        P K ++  +               +G D       S+  E
Sbjct:    27 KPLKKGGKPGKSTPAAGGPVPKKQRRPKEEDEEIASDDEEYNSDLGGDDNTLAFSSDEGE 86

Query:    69 DLTEQERKVILAXXXXXXXXXXXXXXLNDSK-DKHVLKKLETVVLEQEGKLRVNIADRLA 127
             + T Q++++ LA                D +  + V ++L+T  L+  GKLR NIA  L 
Sbjct:    87 EETPQDKRLRLAKQYLSEIEKQEAERAEDRELAQSVEQRLQTEYLDSVGKLRRNIAGSL- 145

Query:   128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET-----RSKVCSS-P 181
              A         K H   I  +A++ D K +Y+  K   ++KW  ET     +S V S   
Sbjct:   146 KACESSRILKHKLHHTPICALALSPDGKFLYTGAKSQFLLKWCTETGKVLEKSDVLSHRE 205

Query:   182 FVKTDRKSYPPIXXXXXXXXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAIS 240
               +T +K    +               +   +I++W   +++H+ T  GH+  + GL   
Sbjct:   206 EPETGKKRRSHVISICLSSDMKYLALAEGGPHIQIWCPQTMKHIKTLKGHRDSVAGLVFR 265

Query:   241 FECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW 300
                  LYS++ DRS+K+W++++ AYVE+LFGHQ+A+TS+D L++ R I++GG+D S+R+W
Sbjct:   266 KGTHDLYSAAKDRSVKIWSLDEMAYVESLFGHQTAVTSIDALSRERAITAGGSDCSLRIW 325

Query:   301 KIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360
             KI EESQL++NGH   I+  + +ND+ F++ G DG + LWS LKK P  T  +AHG    
Sbjct:   326 KITEESQLIYNGHKDSIECVKYINDEHFVSGGMDGAIGLWSALKKKPICTTQLAHGV-GE 384

Query:   361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSD 419
             +   NWIT++A + N+DLVA+GS DGCV+LW+  P  R +  +Q I ++G IN L F +D
Sbjct:   385 NGVANWITAIAVVVNTDLVATGSCDGCVRLWQTNPNARKMNLIQSISIAGFINGLAFNAD 444

Query:   420 HKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQLK 454
                L    G EHR GRW  +K  KN V ++D++L+
Sbjct:   445 GSKLFVATGQEHRLGRWWRLKEAKNQVVVLDVKLQ 479

GO:0006364 "rRNA processing" evidence=ISS

GO:0003729 "mRNA binding" evidence=ISS

GO:0030532 "small nuclear ribonucleoprotein complex" evidence=ISS

GO:0034511 "U3 snoRNA binding" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

MGI|MGI:2384313 Rrp9 "RRP9, small subunit (SSU) processome component, homolog (yeast)" [Mus musculus (taxid:10090)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 162/404 (40%), Positives = 231/404 (57%)

Query:    61 EEHSEVEEDLTEQERKVILAXXXXXXXXXXXXXXLNDS--KDKHVLKKLETVVLEQEGKL 118
             EE  E+EE  T QE+K+ LA                    ++  V  +L+  VLEQ G+L
Sbjct:    66 EEEEELEE--TAQEKKLRLAKLYLEQLRQQEEEKAEARAFEEDQVAGRLKEDVLEQRGRL 123

Query:   119 RVNIADRL-ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV 177
             + ++A  + A A        G  H+ SITC+ +T D   ++SA KD  IIKW +ET  K+
Sbjct:   124 QKSVAKEIQAPAPTDIRVLRG--HQLSITCLVITPDDLAIFSAAKDCTIIKWSVETGRKL 181

Query:   178 CSSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLWSS-SLEHLHTFTGHK 231
                P  K   +  P      +             SGD +  I +W + S +HL+TFTGH+
Sbjct:   182 HVIPRAKKGAQGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHR 241

Query:   232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
               ++GLA       LYS+S+DRS+KVWN  + +YVETLFGHQ A+ +LD L++   +++G
Sbjct:   242 DAVSGLAFRKGTHQLYSTSHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAG 301

Query:   292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
             G D +VRVWKI EESQLVF GH   ID    +N++  ++  +DG+++LW + KK P    
Sbjct:   302 GRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQ 361

Query:   352 PVAHGY--DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLS 408
               AHG   +    +P W++SVA L N+DLVA+GS++  V+LW+     R L+ L DIPL 
Sbjct:   362 REAHGLHGEPGLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIPLV 421

Query:   409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
             G INSL F+S    LVAG+G EHR GRW  IK  +N+V II ++
Sbjct:   422 GFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

GO:0003674 "molecular_function" evidence=ND

GO:0003723 "RNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0030529 "ribonucleoprotein complex" evidence=IEA

UNIPROTKB|F1NIY8 F1NIY8 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 129/314 (41%), Positives = 190/314 (60%)

Query:   105 KKLETVVLEQEGKLRVNIA-DRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKD 163
             ++L+  VLEQ+G+LR   A D    A        G  H+ S+TC+ V+ D K ++SA KD
Sbjct:    53 ERLKEAVLEQQGRLRRPAAQDVCPPAPDAIRVLRG--HQHSVTCLVVSPDDKFIFSAAKD 110

Query:   164 GIIIKWLLETRSKVCSSPFVKTDRKSYPP-----IXXXXXXXXXXXXXSGDNNSNIKLW- 217
             G +IKW +E+  K+C  P  K   +  P      +             +GD N  I +W 
Sbjct:   111 GSVIKWEVESGKKLCVVPGGKKSTEGQPMGHTAHVLCIAISSDGKYLATGDRNKLILIWE 170

Query:   218 SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
             +++ + L+TFTGH+  ++GL+       LYS+S+DRS+KVWN+E+ AYVETLFGHQ  IT
Sbjct:   171 AATCKRLYTFTGHRDAVSGLSFRKGTYQLYSASHDRSVKVWNVEENAYVETLFGHQDVIT 230

Query:   278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTL 337
              +D L++   ++SGG D +VR WKI EESQL+F GH   ID  + +N++  ++  +DG++
Sbjct:   231 GMDSLSRECCVTSGGRDGTVRFWKIPEESQLIFYGHQGSIDCIQLINEEHMVSGADDGSV 290

Query:   338 SLWSILKKVPTHTIPVAHGYDSSSSE---PNWITSVACLHNSDLVASGSYDGCVKLWKIT 394
             +LW + KK P   +  +HG   S+ +   P W+++VA L NSDLVA+GS+ GCVKLWK  
Sbjct:   291 ALWGLAKKKPLALVRQSHGTQGSAQDLQQPYWVSAVAALLNSDLVATGSHSGCVKLWKCG 350

Query:   395 PK-RTLEFLQDIPL 407
                + LE L DIPL
Sbjct:   351 EGFQKLEPLCDIPL 364

GO:0005634 "nucleus" evidence=IEA

POMBASE|SPAC2E1P5.05 SPAC2E1P5.05 "U3 snoRNP-associated protein Rrp9 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 312 (114.9 bits), Expect = 5.9e-50, Sum P(3) = 5.9e-50
 Identities = 62/152 (40%), Positives = 94/152 (61%)

Query:   218 SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
             S +LE  H +  H+  + GLA+    + ++S S DRSIKVW+++  +Y+ETLFGHQ  I 
Sbjct:   237 SVTLEPQHCWKHHRDAVMGLAMRRGTNEMFSCSADRSIKVWSLDQMSYIETLFGHQDVIF 296

Query:   278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN----------GHSRG-IDMTRRVNDQ 326
              +D LA+ R +S GG D++ R+WKI EESQLVF           G+  G +D    +++ 
Sbjct:   297 GVDALARERCVSVGGRDRTSRLWKIVEESQLVFRSGGTSMKATAGYMEGSVDCVAMIDED 356

Query:   327 QFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358
              F+T  ++G ++LWS+ +K P  T P+AHG D
Sbjct:   357 HFVTGSDNGVIALWSVQRKKPLFTYPLAHGLD 388

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0030490 "maturation of SSU-rRNA" evidence=ISO

GO:0030515 "snoRNA binding" evidence=ISO

GO:0032040 "small-subunit processome" evidence=ISO

TAIR|locus:2127408 EMB2271 "AT4G21130" [Arabidopsis thaliana (taxid:3702)]

 Score = 486 (176.1 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
 Identities = 119/382 (31%), Positives = 200/382 (52%)

Query:    96 NDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNG-KPHRASITCIAVTSDS 154
             +D +D  V K L    LE+ G++R   A R+ +      KF     H+ S+T +A++ D 
Sbjct:    99 DDFRDSLVAKTLMQEQLEKSGRVRRANALRVQDLQS-SDKFRVIVKHQHSVTGVALSDDD 157

Query:   155 KHVYSACKDGIIIKWLLET-RS--------KVCSSPFVKTDRKSYP----PIXXXXXXXX 201
                +S  KDG I+ W + + +S        +V  S  +K     Y               
Sbjct:   158 SRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSD 217

Query:   202 XXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
                  +G  + ++ LW   + EH+  FTGH   ++ L        L+S S D ++ +WN 
Sbjct:   218 GRYLATGGVDCHVHLWDIRTREHVQAFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNA 277

Query:   261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT 320
             E R Y+E+ FGHQS + S+D L + RV+S G  D++++++K+ E ++L++       +  
Sbjct:   278 EHRTYIESCFGHQSELLSIDALGRERVLSVG-RDRTMQLYKVPESTRLIYRASESNFECC 336

Query:   321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH----GYDSSSSE--P--NWITSVAC 372
               VN  +F++  ++G+++LWSILKK P   +  AH     +DS +    P  +W++SVA 
Sbjct:   337 CFVNSDEFLSGSDNGSIALWSILKKKPVFIVNNAHHVIADHDSVNHNCTPACSWVSSVAV 396

Query:   373 LHNSDLVASGSYDGCVKLWKI-TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431
                S+L ASG+ +GCV+LW + +    ++ L ++PL G +NSL F    + L+AG+G E 
Sbjct:   397 CRGSELAASGAGNGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEP 456

Query:   432 RFGRWKTIKGVKNTVAIIDIQL 453
             R GRW  +K  +N VAI  ++L
Sbjct:   457 RLGRWGCLKSAQNGVAIHPLRL 478

GO:0000166 "nucleotide binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0006364 "rRNA processing" evidence=ISS

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

TAIR|locus:2115984 YAO "AT4G05410" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.1e-44, Sum P(2) = 9.1e-44
 Identities = 80/298 (26%), Positives = 142/298 (47%)

Query:    96 NDSKDKHVLKK-LETVVLEQEGKLRVNIADRLANATVVCTKFNG-KPHRASITCIAVTSD 153
             +D  D   +KK L     E  G++R  IA R+    +    F+    HR S+  +A++ D
Sbjct:   114 DDEDDDETIKKSLMQKQQEDSGRIRRLIASRVQEP-LSTDGFSVIVKHRRSVVSVALSDD 172

Query:   154 SKHVYSACKDGIIIKWLLET--RSKVC--SSPFVKTD-RKSYPPIXXXXXXXXXXXXXSG 208
                 +SA KDG I+ W + +    K    S   +K+   K   P              S 
Sbjct:   173 DSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSS 232

Query:   209 DN--------NSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
             D         + ++ +W   + EH+  F GH+  ++ L   +    LYS S DR++KVWN
Sbjct:   233 DGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN 292

Query:   260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDM 319
             +ED+A++    GHQ  I ++D L K R ++ G  D+++   K+ E +++++   +  ++ 
Sbjct:   293 VEDKAFITENHGHQGEILAIDALRKERALTVG-RDRTMLYHKVPESTRMIYRAPASSLES 351

Query:   320 TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD 377
                ++D ++++  ++GT++LW +LKK P      AH        P+ IT+   L N D
Sbjct:   352 CCFISDNEYLSGSDNGTVALWGMLKKKPVFVFKNAH-----QDIPDGITTNGILENGD 404

GO:0000166 "nucleotide binding" evidence=ISS

GO:0000266 "mitochondrial fission" evidence=ISS

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005680 "anaphase-promoting complex" evidence=ISS

GO:0005732 "small nucleolar ribonucleoprotein complex" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0005730 "nucleolus" evidence=IDA

GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS

GO:0009553 "embryo sac development" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0060321 "acceptance of pollen" evidence=IMP

GO:0001510 "RNA methylation" evidence=RCA

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9P7C0	YKU5_SCHPO	No assigned EC number	0.3258	0.8370	0.7251	yes	N/A
Q91WM3	U3IP2_MOUSE	No assigned EC number	0.4238	0.8370	0.8	yes	N/A
O43818	U3IP2_HUMAN	No assigned EC number	0.4314	0.8370	0.8	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	454
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-42
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-35
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-29
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-26
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-17
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	6e-14
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	3e-12
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	8e-07
smart00320	40	smart00320, WD40, WD40 repeats	2e-06
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	5e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	8e-05
smart00320	40	smart00320, WD40, WD40 repeats	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	3e-04
smart00320	40	smart00320, WD40, WD40 repeats	3e-04
smart00320	40	smart00320, WD40, WD40 repeats	0.004

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  152 bits (385), Expect = 1e-42
 Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 36/299 (12%)

Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS----SPFVKTDRKSYPPIL 194
           K H   +TC+A + D K + +   DG I  W LET   + +    +  V+          
Sbjct: 6   KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRD--------- 56

Query: 195 ALAVANNNELVASGDNNSNIKLWSSSLEH-LHTFTGHKAPITGLAISFECDTLYSSSNDR 253
             A A+   L +   + + I+LW       + T TGH + ++ +A S +   L SSS D+
Sbjct: 57  VAASADGTYLASGSSDKT-IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDK 115

Query: 254 SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES-QLVFNG 312
           +IKVW++E    + TL GH   + S+        ++S   D ++++W ++         G
Sbjct: 116 TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG 175

Query: 313 HSRGIDMTRRV----NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368
           H+  +     V    + ++ ++   DGT+ LW +       T+   H         N + 
Sbjct: 176 HTGEV---NSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTL-RGH--------ENGVN 223

Query: 369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDHKHLVAG 426
           SVA   +  L+ASGS DG +++W +   RT E +Q +   +  + SL ++ D K L +G
Sbjct: 224 SVAFSPDGYLLASGSEDGTIRVWDL---RTGECVQTLSGHTNSVTSLAWSPDGKRLASG 279

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  132 bits (335), Expect = 1e-35
 Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 18/257 (7%)

Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
           K H   +  +A ++D  ++ S   D  I  W LET   V +   +         + ++A 
Sbjct: 48  KGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRT---LTGHTS---YVSSVAF 101

Query: 199 ANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV 257
           + +  +++S   +  IK+W   + + L T  GH   +  +A S +   + SSS D +IK+
Sbjct: 102 SPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKL 161

Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRG 316
           W++     V TL GH   + S+        + S  +D ++++W +     L    GH  G
Sbjct: 162 WDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENG 221

Query: 317 IDMTRRVNDQQFIT-CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
           ++      D   +    EDGT+ +W +       T+   H         N +TS+A   +
Sbjct: 222 VNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS-GH--------TNSVTSLAWSPD 272

Query: 376 SDLVASGSYDGCVKLWK 392
              +ASGS DG +++W 
Sbjct: 273 GKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  115 bits (289), Expect = 5e-29
 Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 24/235 (10%)

Query: 223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL 282
              T  GH   +T +A S +   L + S D +IKVW++E    + TL GH   +  +   
Sbjct: 1   LRRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAAS 60

Query: 283 AKNRVISSGGTDKSVRVWKIQEESQL-VFNGHS---RGIDMTRRVNDQQFITCGEDGTLS 338
           A    ++SG +DK++R+W ++    +    GH+     +  +   + +   +   D T+ 
Sbjct: 61  ADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSP--DGRILSSSSRDKTIK 118

Query: 339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
           +W +       T+   H         +W+ SVA   +   VAS S DG +KLW +   + 
Sbjct: 119 VWDVETGKCLTTLR-GH--------TDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKC 169

Query: 399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGT------EHRFGRW-KTIKGVKNTV 446
           +  L     +G +NS+ F+ D + L++          +   G+   T++G +N V
Sbjct: 170 VATLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGV 222

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score =  110 bits (276), Expect = 2e-26
 Identities = 89/360 (24%), Positives = 151/360 (41%), Gaps = 18/360 (5%)

Query: 91  EKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNG---KPHRASITC 147
            K KL    +        +++     +  + +   L+++ V     +    + H  SIT 
Sbjct: 11  NKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITS 70

Query: 148 IAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS 207
           IA + D + + S   DG I  W L+   K+  S        S   +   +   N+ L+AS
Sbjct: 71  IAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKS-LEGLHDSSVSKLALSSPDGNSILLAS 129

Query: 208 GDNNSNIKLW--SSSLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRA 264
              +  +KLW  S+  + + T  GH   +T LA S +   L   SS D +IK+W++    
Sbjct: 130 SSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK 189

Query: 265 YVETLFGHQSAITSLDILAKNR-VISSGGTDKSVRVWKIQ--EESQLVFNGHSRGIDMTR 321
            + TL GH   ++SL        +I+SG +D ++R+W +   +  +   +GHS  +  + 
Sbjct: 190 PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSF 249

Query: 322 RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381
             +     +   DGT+ LW +            H           + SVA   +  L+AS
Sbjct: 250 SPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSS--------SVLSVAFSPDGKLLAS 301

Query: 382 GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           GS DG V+LW +   + L  L      G ++SL F+ D   LV+G   +     W    G
Sbjct: 302 GSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG 361

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 84.4 bits (207), Expect = 2e-17
 Identities = 60/262 (22%), Positives = 116/262 (44%), Gaps = 22/262 (8%)

Query: 139 KPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALA 197
             H   ++ +A + D    + S   DG I  W L T         +++    +   +  +
Sbjct: 195 AGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLST------GKLLRSTLSGHSDSVVSS 248

Query: 198 VANNNELVASGDNNSNIKLWS--SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
            + +  L+ASG ++  I+LW   SS   L T +GH + +  +A S +   L S S+D ++
Sbjct: 249 FSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTV 308

Query: 256 KVWNIE--DRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLV-FN 311
           ++W++E        TL GH+  ++SL        ++S G  D ++R+W ++    L    
Sbjct: 309 RLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE 368

Query: 312 GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371
           GHS  + ++   + +   +   DGT+ LW +                +     + +TS+ 
Sbjct: 369 GHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLR---------NLDGHTSRVTSLD 419

Query: 372 CLHNSDLVASGSYDGCVKLWKI 393
              +   +ASGS D  ++LW +
Sbjct: 420 FSPDGKSLASGSSDNTIRLWDL 441

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 73.2 bits (178), Expect = 6e-14
 Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 12/209 (5%)

Query: 146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV 205
              + + D   + S   DG I  W L + S +     ++T       +L++A + + +L+
Sbjct: 245 VVSSFSPDGSLLASGSSDGTIRLWDLRSSSSL-----LRTLSGHSSSVLSVAFSPDGKLL 299

Query: 206 ASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIE 261
           ASG ++  ++LW      L    T  GH+ P++ L+ S +   L S  S+D +I++W++ 
Sbjct: 300 ASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLR 359

Query: 262 DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG--IDM 319
               ++TL GH S + S+      RV+SSG TD +VR+W +   S L            +
Sbjct: 360 TGKPLKTLEGH-SNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSL 418

Query: 320 TRRVNDQQFITCGEDGTLSLWSILKKVPT 348
               + +   +   D T+ LW +   + +
Sbjct: 419 DFSPDGKSLASGSSDNTIRLWDLKTSLKS 447

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 67.8 bits (164), Expect = 3e-12
 Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 5/164 (3%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA- 199
           H +S+  +A + D K + S   DG +  W LET   + S     T +    P+ +L+ + 
Sbjct: 283 HSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSS----LTLKGHEGPVSSLSFSP 338

Query: 200 NNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
           + + LV+ G ++  I+LW              + +  ++ S +   + S S D ++++W+
Sbjct: 339 DGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWD 398

Query: 260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ 303
           +   + +  L GH S +TSLD     + ++SG +D ++R+W ++
Sbjct: 399 LSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 45.0 bits (107), Expect = 8e-07
 Identities = 14/38 (36%), Positives = 24/38 (63%)

Query: 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
           + L T  GH  P+T +A S + + L S S+D +++VW+
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
           S E L T  GH  P+T +A S +   L S S+D +IK+W+
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 9/124 (7%)

Query: 141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA 199
           H   ++ ++ + D   + S    DG I  W L T   +          + +  +L+++ +
Sbjct: 327 HEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPL-------KTLEGHSNVLSVSFS 379

Query: 200 NNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
            +  +V+SG  +  ++LW  S+   L    GH + +T L  S +  +L S S+D +I++W
Sbjct: 380 PDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLW 439

Query: 259 NIED 262
           +++ 
Sbjct: 440 DLKT 443

Length = 466

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 39.3 bits (92), Expect = 8e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
           + TL GH   +TS+       +++SG  D +VRVW 
Sbjct: 4   LRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
           ++TL GH   +TS+      + ++SG  D ++++W 
Sbjct: 5   LKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWK 392
             +TSVA   + +L+ASGS DG V++W 
Sbjct: 12  GPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWK 392
             +TSVA   +   +ASGS DG +KLW 
Sbjct: 13  GPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 34.6 bits (80), Expect = 0.004
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKW 169
           K H   +T +A + D K++ S   DG I  W
Sbjct: 9   KGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	454
KOG0299|consensus	479		100.0
KOG0272|consensus	459		100.0
KOG0271|consensus	480		100.0
KOG0286|consensus	343		100.0
KOG0271|consensus	480		100.0
KOG0279|consensus	315		100.0
KOG0272|consensus	459		100.0
KOG0295|consensus	406		100.0
KOG0279|consensus	315		100.0
KOG0296|consensus	399		100.0
KOG0315|consensus	311		100.0
KOG0285|consensus	460		100.0
KOG0284|consensus	464		100.0
KOG0273|consensus	524		100.0
KOG0273|consensus	524		100.0
KOG0282|consensus	503		100.0
KOG0263|consensus	707		100.0
KOG0645|consensus	312		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0265|consensus	338		100.0
KOG0286|consensus	343		100.0
KOG0266|consensus	456		100.0
KOG0291|consensus	893		100.0
KOG0276|consensus	794		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0318|consensus	603		100.0
KOG0293|consensus	519		100.0
KOG0291|consensus	893		100.0
KOG0278|consensus	334		100.0
KOG0315|consensus	311		100.0
KOG0281|consensus	499		100.0
KOG0316|consensus	307		100.0
KOG0284|consensus	464		100.0
KOG0772|consensus	641		100.0
KOG0263|consensus	707		100.0
KOG0275|consensus	508		100.0
KOG0313|consensus	423		100.0
KOG0292|consensus	1202		100.0
KOG0285|consensus	460		100.0
KOG0319|consensus	775		100.0
KOG0319|consensus	775		100.0
KOG0296|consensus	399		100.0
KOG0265|consensus	338		100.0
KOG0283|consensus	712		100.0
KOG0316|consensus	307		100.0
KOG0647|consensus	347		100.0
KOG0318|consensus	603		100.0
KOG0645|consensus	312		100.0
KOG0310|consensus	487		100.0
KOG0288|consensus	459		100.0
KOG0277|consensus	311		100.0
KOG0640|consensus	430		100.0
KOG0295|consensus	406		100.0
KOG0281|consensus	499		100.0
KOG0306|consensus	888		100.0
KOG0266|consensus	456		100.0
KOG0276|consensus	794		100.0
KOG1446|consensus	311		100.0
KOG0300|consensus	481		100.0
KOG0643|consensus	327		100.0
KOG0305|consensus	484		100.0
KOG1036|consensus	323		100.0
KOG0292|consensus	1202		100.0
PTZ00421	493	coronin; Provisional	100.0
KOG0268|consensus	433		100.0
KOG0274|consensus	537		100.0
KOG1407|consensus	313		100.0
KOG0282|consensus	503		100.0
KOG2055|consensus	514		100.0
KOG0306|consensus	888		100.0
PTZ00420	568	coronin; Provisional	100.0
KOG0293|consensus	519		100.0
KOG0289|consensus	506		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0973|consensus	942		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0294|consensus	362		100.0
KOG1446|consensus	311		100.0
KOG2096|consensus	420		100.0
KOG0299|consensus	479		99.98
KOG0641|consensus	350		99.98
KOG1407|consensus	313		99.98
KOG0278|consensus	334		99.98
KOG0294|consensus	362		99.97
KOG0308|consensus	735		99.97
KOG0313|consensus	423		99.97
KOG0275|consensus	508		99.97
KOG0274|consensus	537		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0301|consensus	745		99.97
KOG0277|consensus	311		99.97
KOG0639|consensus	705		99.97
KOG0310|consensus	487		99.97
KOG0305|consensus	484		99.97
KOG1539|consensus	910		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0643|consensus	327		99.96
KOG1408|consensus	1080		99.96
KOG0640|consensus	430		99.96
KOG0973|consensus	942		99.96
KOG1274|consensus	933		99.96
KOG0772|consensus	641		99.96
KOG0288|consensus	459		99.96
KOG0641|consensus	350		99.96
KOG0647|consensus	347		99.96
KOG1332|consensus	299		99.96
KOG1332|consensus	299		99.96
KOG0289|consensus	506		99.96
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.96
KOG2106|consensus	626		99.96
KOG0270|consensus	463		99.96
KOG0646|consensus	476		99.96
KOG4283|consensus	397		99.95
KOG0646|consensus	476		99.95
KOG0301|consensus	745		99.95
KOG0308|consensus	735		99.95
KOG1273|consensus	405		99.95
KOG0264|consensus	422		99.95
KOG0264|consensus	422		99.95
KOG2048|consensus	691		99.95
KOG4328|consensus	498		99.95
KOG0269|consensus	839		99.95
KOG0321|consensus	720		99.95
KOG0650|consensus	733		99.95
KOG1034|consensus	385		99.95
KOG1539|consensus	910		99.95
KOG1036|consensus	323		99.95
KOG0268|consensus	433		99.94
KOG0267|consensus	825		99.94
KOG1273|consensus	405		99.94
KOG2106|consensus	626		99.94
KOG1274|consensus	933		99.94
KOG0300|consensus	481		99.94
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.94
KOG0283|consensus	712		99.93
KOG2445|consensus	361		99.93
KOG0639|consensus	705		99.93
KOG0267|consensus	825		99.93
KOG2055|consensus	514		99.93
KOG1063|consensus	764		99.93
KOG0269|consensus	839		99.93
KOG2048|consensus	691		99.93
KOG2445|consensus	361		99.93
KOG1009|consensus	434		99.93
KOG1408|consensus	1080		99.92
KOG4283|consensus	397		99.92
KOG0270|consensus	463		99.92
KOG0302|consensus	440		99.92
KOG1063|consensus	764		99.92
KOG4227|consensus	609		99.92
KOG4378|consensus	673		99.92
KOG2919|consensus	406		99.91
KOG0302|consensus	440		99.91
KOG4378|consensus	673		99.91
KOG1538|consensus	1081		99.91
KOG0321|consensus	720		99.9
KOG0307|consensus	1049		99.9
KOG1188|consensus	376		99.9
KOG0649|consensus	325		99.89
KOG0307|consensus	1049		99.89
KOG0322|consensus	323		99.89
COG2319	466	FOG: WD40 repeat [General function prediction only	99.89
KOG0644|consensus	1113		99.89
KOG2096|consensus	420		99.88
KOG1517|consensus	1387		99.88
KOG1445|consensus	1012		99.88
KOG1034|consensus	385		99.88
KOG0303|consensus	472		99.88
KOG4328|consensus	498		99.88
PRK11028	330	6-phosphogluconolactonase; Provisional	99.87
KOG0642|consensus	577		99.87
KOG0642|consensus	577		99.87
KOG1587|consensus	555		99.87
KOG0650|consensus	733		99.87
KOG2919|consensus	406		99.86
COG2319	466	FOG: WD40 repeat [General function prediction only	99.86
KOG1310|consensus	758		99.86
KOG0649|consensus	325		99.86
KOG1538|consensus	1081		99.86
KOG1524|consensus	737		99.85
KOG1007|consensus	370		99.85
KOG0303|consensus	472		99.85
KOG1963|consensus	792		99.85
KOG1587|consensus	555		99.84
KOG1445|consensus	1012		99.84
KOG1334|consensus	559		99.84
KOG0771|consensus	398		99.84
KOG1009|consensus	434		99.83
KOG1240|consensus	1431		99.83
KOG0290|consensus	364		99.82
KOG1188|consensus	376		99.82
KOG0644|consensus	1113		99.82
KOG1963|consensus	792		99.8
PRK11028	330	6-phosphogluconolactonase; Provisional	99.8
KOG4497|consensus	447		99.8
KOG1272|consensus	545		99.8
KOG2110|consensus	391		99.79
KOG4227|consensus	609		99.79
KOG2110|consensus	391		99.79
PRK01742	429	tolB translocation protein TolB; Provisional	99.79
KOG1523|consensus	361		99.78
KOG0290|consensus	364		99.77
KOG1524|consensus	737		99.77
KOG2321|consensus	703		99.77
KOG1523|consensus	361		99.76
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.76
KOG1007|consensus	370		99.76
KOG2139|consensus	445		99.76
PRK01742	429	tolB translocation protein TolB; Provisional	99.76
KOG2111|consensus	346		99.75
KOG1517|consensus	1387		99.74
KOG1272|consensus	545		99.74
KOG0771|consensus	398		99.74
KOG4497|consensus	447		99.73
KOG2111|consensus	346		99.72
PRK03629	429	tolB translocation protein TolB; Provisional	99.72
KOG3881|consensus	412		99.72
KOG1310|consensus	758		99.71
KOG0322|consensus	323		99.69
KOG1240|consensus	1431		99.69
PRK03629	429	tolB translocation protein TolB; Provisional	99.68
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.67
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.67
PRK04922	433	tolB translocation protein TolB; Provisional	99.67
PRK05137	435	tolB translocation protein TolB; Provisional	99.67
PRK02889	427	tolB translocation protein TolB; Provisional	99.66
KOG2394|consensus	636		99.66
PRK04922	433	tolB translocation protein TolB; Provisional	99.64
KOG0280|consensus	339		99.64
KOG2394|consensus	636		99.64
PRK02889	427	tolB translocation protein TolB; Provisional	99.63
PRK05137	435	tolB translocation protein TolB; Provisional	99.63
KOG2041|consensus	1189		99.63
KOG1409|consensus	404		99.63
KOG2139|consensus	445		99.62
KOG1354|consensus	433		99.61
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.6
KOG0974|consensus	967		99.6
KOG1354|consensus	433		99.59
KOG3881|consensus	412		99.59
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.59
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.58
KOG1064|consensus	2439		99.58
KOG1334|consensus	559		99.58
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.57
KOG2315|consensus	566		99.57
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.56
PRK00178	430	tolB translocation protein TolB; Provisional	99.55
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.54
PRK04792	448	tolB translocation protein TolB; Provisional	99.53
KOG4547|consensus	541		99.52
PRK00178	430	tolB translocation protein TolB; Provisional	99.52
KOG4190|consensus	1034		99.52
KOG2314|consensus	698		99.51
PRK04792	448	tolB translocation protein TolB; Provisional	99.51
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.51
KOG0974|consensus	967		99.51
KOG2321|consensus	703		99.5
KOG4547|consensus	541		99.49
KOG2314|consensus	698		99.48
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.44
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.43
PRK01029	428	tolB translocation protein TolB; Provisional	99.42
KOG0280|consensus	339		99.42
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.41
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.41
KOG1832|consensus	1516		99.38
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.38
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.38
KOG1064|consensus	2439		99.36
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	99.36
COG4946	668	Uncharacterized protein related to the periplasmic	99.36
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.36
KOG2041|consensus	1189		99.35
PRK01029	428	tolB translocation protein TolB; Provisional	99.34
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.32
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	99.32
KOG4532|consensus	344		99.31
KOG4190|consensus	1034		99.3
KOG3914|consensus	390		99.3
KOG2315|consensus	566		99.29
KOG1912|consensus	1062		99.27
KOG1912|consensus	1062		99.27
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.26
KOG0309|consensus	1081		99.25
KOG3914|consensus	390		99.25
KOG1409|consensus	404		99.23
PRK04043	419	tolB translocation protein TolB; Provisional	99.23
COG4946	668	Uncharacterized protein related to the periplasmic	99.21
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.19
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.19
KOG2066|consensus	846		99.17
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	99.17
KOG0882|consensus	558		99.15
PRK04043	419	tolB translocation protein TolB; Provisional	99.12
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.1
KOG4532|consensus	344		99.09
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.08
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.06
KOG2695|consensus	425		99.02
KOG4714|consensus	319		99.02
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	99.01
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	99.0
KOG3621|consensus	726		98.99
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.99
KOG1275|consensus	1118		98.98
KOG2695|consensus	425		98.97
KOG0309|consensus	1081		98.96
KOG1275|consensus	1118		98.95
KOG3617|consensus	1416		98.93
KOG4649|consensus	354		98.93
KOG2066|consensus	846		98.93
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.92
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	98.92
KOG4714|consensus	319		98.92
KOG1920|consensus	1265		98.87
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.83
KOG1645|consensus	463		98.83
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.8
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	98.8
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.78
KOG1645|consensus	463		98.78
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.77
KOG4649|consensus	354		98.77
KOG2114|consensus	933		98.76
KOG0882|consensus	558		98.76
KOG1832|consensus	1516		98.75
KOG2114|consensus	933		98.74
KOG3617|consensus	1416		98.7
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.67
KOG1920|consensus	1265		98.64
PRK02888	635	nitrous-oxide reductase; Validated	98.6
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	98.57
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	98.55
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.54
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.53
KOG3621|consensus	726		98.52
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.5
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.48
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	98.46
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.42
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.37
KOG1008|consensus	783		98.37
COG3391	381	Uncharacterized conserved protein [Function unknow	98.35
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.34
PRK02888	635	nitrous-oxide reductase; Validated	98.34
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	98.32
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	98.3
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.26
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.23
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	98.22
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	98.19
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.19
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	98.18
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.17
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	98.13
KOG2079|consensus	1206		98.12
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	98.1
COG3391	381	Uncharacterized conserved protein [Function unknow	98.1
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.04
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	98.02
KOG1897|consensus	1096		98.01
KOG1008|consensus	783		98.0
KOG4640|consensus	665		97.98
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	97.89
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.87
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	97.86
KOG2395|consensus	644		97.86
KOG1897|consensus	1096		97.82
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.78
KOG4640|consensus	665		97.78
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.75
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.74
PRK13616	591	lipoprotein LpqB; Provisional	97.73
KOG2444|consensus	238		97.72
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.71
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	97.7
KOG2079|consensus	1206		97.7
PHA02713	557	hypothetical protein; Provisional	97.69
PRK13616	591	lipoprotein LpqB; Provisional	97.64
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.63
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.63
KOG4441|consensus	571		97.62
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.62
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.59
KOG4499|consensus	310		97.56
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	97.47
PHA02713	557	hypothetical protein; Provisional	97.44
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.44
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	97.39
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	97.38
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.37
KOG2395|consensus	644		97.31
KOG4441|consensus	571		97.25
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	97.21
PRK13684	334	Ycf48-like protein; Provisional	97.21
PF14727	418	PHTB1_N: PTHB1 N-terminus	97.18
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	97.12
KOG2444|consensus	238		97.1
COG5276	370	Uncharacterized conserved protein [Function unknow	97.09
KOG3616|consensus	1636		97.07
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	97.06
PHA03098	534	kelch-like protein; Provisional	97.06
KOG4499|consensus	310		97.03
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	97.02
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	97.02
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	97.0
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	97.0
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.88
PRK10115	686	protease 2; Provisional	96.85
PHA03098	534	kelch-like protein; Provisional	96.84
KOG2280|consensus	829		96.83
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	96.77
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	96.62
KOG1916|consensus	1283		96.57
PHA02790	480	Kelch-like protein; Provisional	96.53
KOG2377|consensus	657		96.52
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	96.51
PHA02790	480	Kelch-like protein; Provisional	96.5
COG5276	370	Uncharacterized conserved protein [Function unknow	96.47
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	96.45
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.37
KOG3630|consensus	1405		96.3
PLN00033	398	photosystem II stability/assembly factor; Provisio	96.28
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	96.21
COG5167	776	VID27 Protein involved in vacuole import and degra	96.17
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	96.17
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	96.16
PRK10115	686	protease 2; Provisional	96.11
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.05
KOG3630|consensus	1405		96.01
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.94
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.92
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.89
KOG2280|consensus	829		95.87
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.59
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	95.56
KOG1983|consensus	993		95.4
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	95.4
PF13449	326	Phytase-like: Esterase-like activity of phytase	95.23
KOG2063|consensus	877		95.07
COG4590	733	ABC-type uncharacterized transport system, permeas	94.97
PF10433	504	MMS1_N: Mono-functional DNA-alkylating methyl meth	94.85
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	94.8
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.78
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	94.69
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	94.67
COG5167	776	VID27 Protein involved in vacuole import and degra	94.67
PRK13684	334	Ycf48-like protein; Provisional	94.64
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	94.63
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	94.51
KOG1916|consensus	1283		94.24
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	94.22
PLN02193	470	nitrile-specifier protein	94.22
KOG2247|consensus	615		94.19
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	94.1
KOG2247|consensus	615		94.0
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	93.98
KOG1898|consensus	1205		93.96
KOG4460|consensus	741		93.89
PLN02153	341	epithiospecifier protein	93.85
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.84
TIGR03118	336	PEPCTERM_chp_1 conserved hypothetical protein TIGR	93.83
PF14727	418	PHTB1_N: PTHB1 N-terminus	93.76
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	93.69
COG3823	262	Glutamine cyclotransferase [Posttranslational modi	93.65
PF05935	477	Arylsulfotrans: Arylsulfotransferase (ASST); Inter	93.6
COG4590	733	ABC-type uncharacterized transport system, permeas	93.26
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.2
KOG2377|consensus	657		93.15
PF12768	281	Rax2: Cortical protein marker for cell polarity	93.08
KOG3616|consensus	1636		92.88
KOG1900|consensus	1311		92.75
PLN00033	398	photosystem II stability/assembly factor; Provisio	92.72
smart00036	302	CNH Domain found in NIK1-like kinases, mouse citro	92.69
PLN02153	341	epithiospecifier protein	92.62
TIGR03606	454	non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH	92.52
PLN02193	470	nitrile-specifier protein	92.5
COG1520	370	FOG: WD40-like repeat [Function unknown]	92.46
KOG1898|consensus	1205		92.43
PF07250	243	Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP	92.42
COG3292	671	Predicted periplasmic ligand-binding sensor domain	92.4
KOG1900|consensus	1311		92.37
COG1520	370	FOG: WD40-like repeat [Function unknown]	91.87
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	91.6
PF03088	89	Str_synth: Strictosidine synthase; InterPro: IPR01	91.43
KOG3522|consensus	925		91.35
PF13449	326	Phytase-like: Esterase-like activity of phytase	91.22
TIGR03032	335	conserved hypothetical protein TIGR03032. This pro	91.16
PF12768	281	Rax2: Cortical protein marker for cell polarity	90.97
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	90.82
COG5290	1243	IkappaB kinase complex, IKAP component [Transcript	90.71
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	90.69
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	90.65
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	90.3
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	90.24
PF10395	670	Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an	90.2
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	89.97
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	89.49
KOG1983|consensus	993		89.44

>KOG0299|consensus

Probab=100.00  E-value=1.4e-55  Score=377.61  Aligned_cols=392  Identities=39%  Similarity=0.701  Sum_probs=344.0

Q ss_pred             ccccccccccCCHHHHhhhhHHHHHHHHHHHHhhccCCcch--HHHHHHhhhhhhhhcCcEeeeehhhhccCce-eEeEe
Q psy17902         60 FEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEKLNDSKD--KHVLKKLETVVLEQEGKLRVNIADRLANATV-VCTKF  136 (454)
Q Consensus        60 ~~~~~e~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  136 (454)
                      .++++++.++|+..+++.|+++++|+++.+.+.....+..+  +.++.+|...++++.|++++.++..+..+.. ..+.+
T Consensus        59 ~~e~e~e~~~Eta~ekr~RlA~e~L~~i~e~~E~~~d~~~~~~e~va~rLked~le~~Gr~~r~~a~~v~~~~s~~~~~~  138 (479)
T KOG0299|consen   59 EEEEEDEFEEETAGEKRLRLAEEYLDEIREIEEDNFDADDLDDELVASRLKEDVLEQSGRVRRLVADKVQAPESSDFRVI  138 (479)
T ss_pred             hhhhcccchhcchhHHHHHHHHHHHHHHHhhhhcccccchhhHHHHHHHHHHHHHHhcceeehhhhhhccccccccceee
Confidence            34455556677899999999999999986544433333333  4489999999999999999999999887766 34667


Q ss_pred             ccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc-cCC----------cccC-CCCCCceEEEEEeCCCcE
Q psy17902        137 NGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS-SPF----------VKTD-RKSYPPILALAVANNNEL  204 (454)
Q Consensus       137 ~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~----------~~~~-~~~~~~v~~~~~~~~~~~  204 (454)
                      ..  |.-+|.||+++|+..++++++.+|+|.-|++.++..... ++.          .... ..|...+.+++.++||+|
T Consensus       139 ~~--H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgky  216 (479)
T KOG0299|consen  139 GK--HQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKY  216 (479)
T ss_pred             cc--ccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcE
Confidence            77  999999999999999999999999999999988775411 111          1111 278889999999999999


Q ss_pred             EEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        205 VASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       205 l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      ||+|+.|..|.||+. +.+.++.+.+|.+.|.+++|-.....|++++.|..|++|+++....+.++.+|...|.+|....
T Consensus       217 latgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~  296 (479)
T KOG0299|consen  217 LATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALS  296 (479)
T ss_pred             EEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhc
Confidence            999999999999999 8888999999999999999998888999999999999999999999999999999999999988


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC---
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS---  360 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---  360 (454)
                      -++.+.+|+.|+++++|++.....+.+.++...+.|+.+.++..|++|+.+|.|.+|++.+.+++++....|+....   
T Consensus       297 reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~  376 (479)
T KOG0299|consen  297 RERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDP  376 (479)
T ss_pred             ccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccc
Confidence            88888888899999999998888889999999999999999999999999999999999999999999998886554   


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ..++.||++++..|..+++|+|+.+|.|++|.+..+ +.+..+...+..+.|++|+|+++|++|++|.|...++..|+..
T Consensus       377 ~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~  456 (479)
T KOG0299|consen  377 VNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCL  456 (479)
T ss_pred             cccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceeeEe
Confidence            234469999999999999999999999999999988 6677777777899999999999999999999999999999999


Q ss_pred             CCCeeEEEEEEeec
Q psy17902        440 KGVKNTVAIIDIQL  453 (454)
Q Consensus       440 ~~~~~~~~~~~~~~  453 (454)
                      ...++.+.++++.+
T Consensus       457 k~~~~~~~v~~~~l  470 (479)
T KOG0299|consen  457 KSGKNSGVVSPRRL  470 (479)
T ss_pred             ecccccceeeeeee
Confidence            99999999887654

>KOG0272|consensus

Probab=100.00  E-value=2.3e-54  Score=366.11  Aligned_cols=279  Identities=21%  Similarity=0.358  Sum_probs=259.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC--CcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN--NELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~v~vw~  218 (454)
                      -+.+|..+.|+++++.|+||+.+|.+++|+..+...+..+.      +|...|.++.|+|.  +..||+|+.||++++|+
T Consensus       174 d~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~------gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~  247 (459)
T KOG0272|consen  174 DTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLR------GHTSRVGAAVFHPVDSDLNLATASADGTVKLWK  247 (459)
T ss_pred             CCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEe------ccccceeeEEEccCCCccceeeeccCCceeeec
Confidence            67889999999999999999999999999999887777766      89999999999997  66899999999999999


Q ss_pred             CC-CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        219 SS-LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       219 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                      ++ ..++..+.+|...|..++|+|+|++|+|++.|.+-++||++++..+....||...|.+++|.++|.++++|+.|..-
T Consensus       248 ~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~  327 (459)
T KOG0272|consen  248 LSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLG  327 (459)
T ss_pred             cCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchh
Confidence            94 48889999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             EEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-
Q psy17902        298 RVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-  374 (454)
Q Consensus       298 ~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-  374 (454)
                      +|||++++.++ .+.+|...|..+.|+ +|..+++|+.|++++|||++....+.+++.         |.+-|+.+.|+| 
T Consensus       328 RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA---------H~nlVS~Vk~~p~  398 (459)
T KOG0272|consen  328 RVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA---------HSNLVSQVKYSPQ  398 (459)
T ss_pred             heeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc---------ccchhhheEeccc
Confidence            99999999988 788999999777765 566789999999999999999999888875         445599999999 


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .|.+|+|++.|++++||...+..++..+.+  |.+.|.++.++||+.+|+++ +.|.++++|.
T Consensus       399 ~g~fL~TasyD~t~kiWs~~~~~~~ksLaG--He~kV~s~Dis~d~~~i~t~-s~DRT~KLW~  458 (459)
T KOG0272|consen  399 EGYFLVTASYDNTVKIWSTRTWSPLKSLAG--HEGKVISLDISPDSQAIATS-SFDRTIKLWR  458 (459)
T ss_pred             CCeEEEEcccCcceeeecCCCcccchhhcC--CccceEEEEeccCCceEEEe-ccCceeeecc
Confidence            778999999999999999999999999998  99999999999999999999 9999999995

>KOG0271|consensus

Probab=100.00  E-value=1.4e-50  Score=338.95  Aligned_cols=289  Identities=22%  Similarity=0.422  Sum_probs=256.4

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .+...+.|  |.++|.|++|+|+|..|++|+.|.++++||+.+.....+..      +|...|.|++|+|||+.||+|+.
T Consensus       106 rCssS~~G--H~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~K------gH~~WVlcvawsPDgk~iASG~~  177 (480)
T KOG0271|consen  106 RCSSSIAG--HGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCK------GHKNWVLCVAWSPDGKKIASGSK  177 (480)
T ss_pred             eeccccCC--CCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeec------CCccEEEEEEECCCcchhhcccc
Confidence            36677889  99999999999999999999999999999999988777776      79999999999999999999999


Q ss_pred             CCcEEEEeC-CC-ccEEeecccCCCeEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        211 NSNIKLWSS-SL-EHLHTFTGHKAPITGLAISF-----ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       211 dg~v~vw~~-~~-~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      ||.|++||. ++ .....+.+|...|++++|.|     ..++|++++.||.|+|||+..+.++..+.+|..+|+|+.|--
T Consensus       178 dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG  257 (480)
T KOG0271|consen  178 DGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG  257 (480)
T ss_pred             CCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC
Confidence            999999998 44 44578899999999999976     567999999999999999999999999999999999999963


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-------------------------------------CC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-------------------------------------ND  325 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-------------------------------------~~  325 (454)
                       ..+|++|+.|++|++|+...+... .+.+|...|+.+..+                                     .+
T Consensus       258 -~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~  336 (480)
T KOG0271|consen  258 -EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSG  336 (480)
T ss_pred             -CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCc
Confidence             368999999999999999988776 788888887665543                                     12


Q ss_pred             CEEEEEeCCCCEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        326 QQFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      ..+++|+.|.++.+|+.... +++.....         |...|+.+.||||+++||+++.|..|++|+..+|+.+..+.+
T Consensus       337 erlVSgsDd~tlflW~p~~~kkpi~rmtg---------Hq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG  407 (480)
T KOG0271|consen  337 ERLVSGSDDFTLFLWNPFKSKKPITRMTG---------HQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG  407 (480)
T ss_pred             ceeEEecCCceEEEecccccccchhhhhc---------hhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh
Confidence            35999999999999997554 35555443         455599999999999999999999999999999999999998


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                        |-++|+.++||.|.++|+++ +.|.++.+|++.+
T Consensus       408 --Hv~~VYqvawsaDsRLlVS~-SkDsTLKvw~V~t  440 (480)
T KOG0271|consen  408 --HVAAVYQVAWSADSRLLVSG-SKDSTLKVWDVRT  440 (480)
T ss_pred             --ccceeEEEEeccCccEEEEc-CCCceEEEEEeee
Confidence              99999999999999999988 8999999999864

>KOG0286|consensus

Probab=100.00  E-value=1e-47  Score=311.07  Aligned_cols=287  Identities=22%  Similarity=0.352  Sum_probs=262.3

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..++|+|  |.+.|+++.|++|+++|++++.||.+.|||.-+..+.+.+++      ....|..++|+|.|+++|+|+.|
T Consensus        47 ~rr~LkG--H~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl------~s~WVMtCA~sPSg~~VAcGGLd  118 (343)
T KOG0286|consen   47 TRRTLKG--HLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPL------PSSWVMTCAYSPSGNFVACGGLD  118 (343)
T ss_pred             eEEEecc--cccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEec------CceeEEEEEECCCCCeEEecCcC
Confidence            3588999  999999999999999999999999999999999888888875      66799999999999999999999


Q ss_pred             CcEEEEeCCC-------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-
Q psy17902        212 SNIKLWSSSL-------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-  283 (454)
Q Consensus       212 g~v~vw~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-  283 (454)
                      +...||+++.       .....+.+|++.+.|+.|.+ ...|++++.|.++.+||+++++.+..|.+|.+.|.+++++| 
T Consensus       119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~  197 (343)
T KOG0286|consen  119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPS  197 (343)
T ss_pred             ceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCC
Confidence            9999999942       23456889999999999987 55799999999999999999999999999999999999999 


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      +++.+++|+-|+..++||++.+.+. .|.+|...|+.+.| |++.-|++|+.|+++++||++..+.+..+....      
T Consensus       198 ~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~------  271 (343)
T KOG0286|consen  198 DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDS------  271 (343)
T ss_pred             CCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCc------
Confidence            8899999999999999999999887 89999999987765 567789999999999999999998888876332      


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                       ....|++++||..|++|++|..|.++.+||.-.++.+..+.+  |...|++|..+|||..|++| +.|..+++|.
T Consensus       272 -~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~G--HeNRvScl~~s~DG~av~Tg-SWDs~lriW~  343 (343)
T KOG0286|consen  272 -IICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAG--HENRVSCLGVSPDGMAVATG-SWDSTLRIWA  343 (343)
T ss_pred             -ccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeec--cCCeeEEEEECCCCcEEEec-chhHheeecC
Confidence             345599999999999999999999999999999999999987  99999999999999999998 9999999994

>KOG0271|consensus

Probab=100.00  E-value=1.5e-47  Score=320.78  Aligned_cols=286  Identities=23%  Similarity=0.376  Sum_probs=254.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-----CCcEEE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-----NNELVA  206 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~  206 (454)
                      +..+.+|  |...|.|++|+|||..||+|+.||.|++||..+++.+....     .+|...|++++|.|     ..++||
T Consensus       149 p~~t~Kg--H~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l-----~gH~K~It~Lawep~hl~p~~r~la  221 (480)
T KOG0271|consen  149 PLFTCKG--HKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL-----RGHKKWITALAWEPLHLVPPCRRLA  221 (480)
T ss_pred             cceeecC--CccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc-----cCcccceeEEeecccccCCCcccee
Confidence            4566777  99999999999999999999999999999999887765433     38999999999976     567999


Q ss_pred             EecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEee---
Q psy17902        207 SGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL---  282 (454)
Q Consensus       207 ~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---  282 (454)
                      +++.||.|+|||+ .+.++..+.+|+.+|+|+.|--+ .++++|+.|++|++|+...|.+.+.+.+|...|+.|+++   
T Consensus       222 s~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy  300 (480)
T KOG0271|consen  222 SSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDY  300 (480)
T ss_pred             cccCCCCEEEEEccCceEEEEeccCccceEEEEEcCC-ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchh
Confidence            9999999999999 67888999999999999999754 499999999999999999999999999999999999987   


Q ss_pred             --------cCCC-------------------------EEEEeeCCCcEEEeeccCCe-EE-EEccccCCeEEEEec-CCC
Q psy17902        283 --------AKNR-------------------------VISSGGTDKSVRVWKIQEES-QL-VFNGHSRGIDMTRRV-NDQ  326 (454)
Q Consensus       283 --------~~~~-------------------------~l~~~~~dg~i~i~d~~~~~-~~-~~~~~~~~i~~~~~~-~~~  326 (454)
                              |.++                         .|++|+.|.++.+|+....+ ++ .+.+|...|+.+.++ ++.
T Consensus       301 ~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r  380 (480)
T KOG0271|consen  301 VLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGR  380 (480)
T ss_pred             hhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCcc
Confidence                    2233                         49999999999999987655 33 788999998877765 567


Q ss_pred             EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC
Q psy17902        327 QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP  406 (454)
Q Consensus       327 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  406 (454)
                      ++++++-|.+|++|+.++++.+.++..         |-..|..++|+.|.++|++|+.|.++++|++.+.+...-+.+  
T Consensus       381 ~IASaSFDkSVkLW~g~tGk~lasfRG---------Hv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpG--  449 (480)
T KOG0271|consen  381 YIASASFDKSVKLWDGRTGKFLASFRG---------HVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPG--  449 (480)
T ss_pred             EEEEeecccceeeeeCCCcchhhhhhh---------ccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCC--
Confidence            889999999999999999999998874         445599999999999999999999999999999888877776  


Q ss_pred             CceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        407 LSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       407 ~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      |...|.++.|+|||..+++| |.|..+++|.
T Consensus       450 h~DEVf~vDwspDG~rV~sg-gkdkv~~lw~  479 (480)
T KOG0271|consen  450 HADEVFAVDWSPDGQRVASG-GKDKVLRLWR  479 (480)
T ss_pred             CCceEEEEEecCCCceeecC-CCceEEEeec
Confidence            89999999999999999988 9999999995

>KOG0279|consensus

Probab=100.00  E-value=1.6e-41  Score=273.50  Aligned_cols=293  Identities=22%  Similarity=0.353  Sum_probs=245.6

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ....+|.+  |++.|+.++..+. ...|++++.|.++.+|++.......-. ......+|...|..++.+++|++.++++
T Consensus         6 ~l~~tl~g--h~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~-~~r~~~GHsH~v~dv~~s~dg~~alS~s   82 (315)
T KOG0279|consen    6 VLRGTLEG--HTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGV-PVRRLTGHSHFVSDVVLSSDGNFALSAS   82 (315)
T ss_pred             eeeeeecC--CCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCc-eeeeeeccceEecceEEccCCceEEecc
Confidence            35567888  9999999999886 578999999999999998765322211 1233347888999999999999999999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc--CCceeEEEeecC--
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH--QSAITSLDILAK--  284 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~--  284 (454)
                      .|+.+++||+ .++..+.|.+|...|.+++|++|.+.+++|+.|.+|++|++-.. +..++..+  ...|.|+.|+|+  
T Consensus        83 wD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~  161 (315)
T KOG0279|consen   83 WDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNES  161 (315)
T ss_pred             ccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCC
Confidence            9999999999 66889999999999999999999999999999999999998754 44454433  789999999998  


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      ..+|++++.|++|++||+++.+.. .+.+|.+.++.+.++ ++...++|+.||.+.+||++.++.+..+.          
T Consensus       162 ~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~----------  231 (315)
T KOG0279|consen  162 NPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE----------  231 (315)
T ss_pred             CcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc----------
Confidence            689999999999999999998776 888999988766655 56778889999999999999999988775          


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC--C-----ceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP--L-----SGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--~-----~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      +...|.+++|+|+...|+.+... .|+|||+.++..+..+....  .     .....+++||+||..|+++ -.|+.|++
T Consensus       232 a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g-~td~~irv  309 (315)
T KOG0279|consen  232 AFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAG-YTDNVIRV  309 (315)
T ss_pred             CCCeEeeEEecCCceeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEee-ecCCcEEE
Confidence            34459999999999888777655 49999999987776654321  1     2235688999999999999 78999999


Q ss_pred             eeee
Q psy17902        436 WKTI  439 (454)
Q Consensus       436 W~~~  439 (454)
                      |.+.
T Consensus       310 ~qv~  313 (315)
T KOG0279|consen  310 WQVA  313 (315)
T ss_pred             EEee
Confidence            9875

>KOG0272|consensus

Probab=100.00  E-value=2.1e-43  Score=299.72  Aligned_cols=245  Identities=18%  Similarity=0.344  Sum_probs=228.4

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG  208 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  208 (454)
                      ....+|.|  |++.|.++.|+|.  +..||||+.||++++|++++...+..+.      +|...|..++|+|+|++|+++
T Consensus       208 ~~~~~l~g--H~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~------gH~~RVs~VafHPsG~~L~Ta  279 (459)
T KOG0272|consen  208 NLLQTLRG--HTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLE------GHLARVSRVAFHPSGKFLGTA  279 (459)
T ss_pred             ceeEEEec--cccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhh------cchhhheeeeecCCCceeeec
Confidence            36788999  9999999999996  6699999999999999999887777776      799999999999999999999


Q ss_pred             cCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        209 DNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       209 ~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      +.|.+-++||+ +...+....+|...|.+++|++||.++++|+.|..-+|||++++.++..+.+|..+|.++.|+|+|..
T Consensus       280 sfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~  359 (459)
T KOG0272|consen  280 SFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYH  359 (459)
T ss_pred             ccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceE
Confidence            99999999999 67777788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      |+||+.|++++|||++....+ .+.+|...|+.+.+.+  +.+|++++.|++++||...+..++..+..         |.
T Consensus       360 lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaG---------He  430 (459)
T KOG0272|consen  360 LATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAG---------HE  430 (459)
T ss_pred             EeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcC---------Cc
Confidence            999999999999999988777 8889999998888874  67899999999999999999999988864         55


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      ..|.++.++|++.+|++++.|.++++|.
T Consensus       431 ~kV~s~Dis~d~~~i~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  431 GKVISLDISPDSQAIATSSFDRTIKLWR  458 (459)
T ss_pred             cceEEEEeccCCceEEEeccCceeeecc
Confidence            6699999999999999999999999995

>KOG0295|consensus

Probab=100.00  E-value=1.1e-41  Score=283.97  Aligned_cols=293  Identities=19%  Similarity=0.338  Sum_probs=267.0

Q ss_pred             hccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE
Q psy17902        126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV  205 (454)
Q Consensus       126 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  205 (454)
                      ..+.......+.|  |..+|+.+-|+|+-..+++++.|++|++||..+++....+.      +|...+..++|+..|++|
T Consensus        94 wipRp~l~~~l~g--~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~Lr------GHt~sv~di~~~a~Gk~l  165 (406)
T KOG0295|consen   94 WIPRPNLVQKLAG--HRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLR------GHTDSVFDISFDASGKYL  165 (406)
T ss_pred             cCCCCCchhhhhc--cccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhh------ccccceeEEEEecCccEE
Confidence            3344456677788  99999999999999999999999999999999998876666      799999999999999999


Q ss_pred             EEecCCCcEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        206 ASGDNNSNIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       206 ~~~~~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      ++++.|-.+.+||.  ...++..+.+|...|.+++|-|.|.++++++.|.+|+.|++.++.++.++.+|...|..+..+.
T Consensus       166 ~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~  245 (406)
T KOG0295|consen  166 ATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ  245 (406)
T ss_pred             EecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecC
Confidence            99999999999999  3577888899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC----------------CCEEEEEeCCCCEEEEecCCCc
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN----------------DQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~----------------~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      ||.++++++.|.+|++|-+.++.+. .+..|..++.++.|.+                +.++.+++.|++|++||+.++.
T Consensus       246 DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~  325 (406)
T KOG0295|consen  246 DGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM  325 (406)
T ss_pred             CeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe
Confidence            9999999999999999999998666 7788888887777642                2478899999999999999999


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ++.++..         |.+||..++|+|.|+||+++..|+++++||+.+++++..+..  |...|+++.|..+-.++++|
T Consensus       326 cL~tL~g---------hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a--h~hfvt~lDfh~~~p~VvTG  394 (406)
T KOG0295|consen  326 CLFTLVG---------HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA--HEHFVTSLDFHKTAPYVVTG  394 (406)
T ss_pred             EEEEEec---------ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC--CcceeEEEecCCCCceEEec
Confidence            9999864         788899999999999999999999999999999999998885  88899999999999999888


Q ss_pred             ecCCCceeeeee
Q psy17902        427 IGTEHRFGRWKT  438 (454)
Q Consensus       427 ~~~d~~i~~W~~  438 (454)
                       +-|..+.+|..
T Consensus       395 -sVdqt~KvwEc  405 (406)
T KOG0295|consen  395 -SVDQTVKVWEC  405 (406)
T ss_pred             -cccceeeeeec
Confidence             89999999963

>KOG0279|consensus

Probab=100.00  E-value=4.7e-41  Score=270.77  Aligned_cols=256  Identities=19%  Similarity=0.330  Sum_probs=233.3

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ..++.|.|  |...|..+..+++|++.++++.|+.+++||+.+++....+.      +|...|.+++|++|++.+++|+.
T Consensus        54 ~~~r~~~G--HsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~------GH~~dVlsva~s~dn~qivSGSr  125 (315)
T KOG0279|consen   54 VPVRRLTG--HSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFV------GHTKDVLSVAFSTDNRQIVSGSR  125 (315)
T ss_pred             ceeeeeec--cceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEE------ecCCceEEEEecCCCceeecCCC
Confidence            36889999  99999999999999999999999999999999998777776      79999999999999999999999


Q ss_pred             CCcEEEEeCCCccEEeeccc--CCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        211 NSNIKLWSSSLEHLHTFTGH--KAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      |.+|.+|++-+.+..++..+  .+-|+|+.|+|+  ..+|++++.|++|++||+++.+....+.+|++.++.++++|||.
T Consensus       126 DkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGs  205 (315)
T KOG0279|consen  126 DKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGS  205 (315)
T ss_pred             cceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCC
Confidence            99999999988877777654  788999999998  68999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      ++++|+.||.+.+||++.++.+....+...|..++|.+..+.++...+..|+|||+.++..+..+...............
T Consensus       206 lcasGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~  285 (315)
T KOG0279|consen  206 LCASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPI  285 (315)
T ss_pred             EEecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcE
Confidence            99999999999999999999999999999999999999999988888889999999999988887765443333334455


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      ..+++|+++|..|++|..|+.|++|.+.
T Consensus       286 clslaws~dG~tLf~g~td~~irv~qv~  313 (315)
T KOG0279|consen  286 CLSLAWSADGQTLFAGYTDNVIRVWQVA  313 (315)
T ss_pred             EEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence            7889999999999999999999999875

>KOG0296|consensus

Probab=100.00  E-value=1.3e-40  Score=277.71  Aligned_cols=284  Identities=15%  Similarity=0.239  Sum_probs=244.2

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      ..+|..  |++.|++++.+|+.++++||+.|..-.+|++.++.....+.      +|...|+++.|+.+|.+||+|+.+|
T Consensus        57 ~~tF~~--H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~elt------gHKDSVt~~~FshdgtlLATGdmsG  128 (399)
T KOG0296|consen   57 LVTFDK--HTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELT------GHKDSVTCCSFSHDGTLLATGDMSG  128 (399)
T ss_pred             eeehhh--cCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEec------CCCCceEEEEEccCceEEEecCCCc
Confidence            456667  99999999999999999999999999999999998777666      7999999999999999999999999


Q ss_pred             cEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      .|.||.. ++.....+...-..|.-+.|+|.+..|++|+.||.|.+|.+.++...+.+.+|..++++-.|.|+|+.++++
T Consensus       129 ~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tg  208 (399)
T KOG0296|consen  129 KVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTG  208 (399)
T ss_pred             cEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEE
Confidence            9999999 666666776667788899999999999999999999999999988888999999999999999999999999


Q ss_pred             eCCCcEEEeeccCCeEE-EEcc------c---------------c-----------CCeEEEEe----------------
Q psy17902        292 GTDKSVRVWKIQEESQL-VFNG------H---------------S-----------RGIDMTRR----------------  322 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~-~~~~------~---------------~-----------~~i~~~~~----------------  322 (454)
                      ..||+|++|++.+++++ ....      +               .           +.+..+..                
T Consensus       209 y~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es  288 (399)
T KOG0296|consen  209 YDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES  288 (399)
T ss_pred             ecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence            99999999999988776 2210      0               0           00000000                


Q ss_pred             ---c----CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        323 ---V----NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       323 ---~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                         .    .-.++++|+-||+|.|||+......+...          |+..|+.+.|.+ ..+|++++.+|.|+.||.++
T Consensus       289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~----------he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRt  357 (399)
T KOG0296|consen  289 VESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE----------HEDGVTKLKWLN-TDYLLTACANGKVRQWDART  357 (399)
T ss_pred             hhhcccccccchhhcccccceEEEEecccchhheecc----------CCCceEEEEEcC-cchheeeccCceEEeeeccc
Confidence               0    01345678899999999998877766664          455599999998 77999999999999999999


Q ss_pred             CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        396 KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       396 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      |+++..+.+  |...|.+++++|+.++++++ +.|+..+++++
T Consensus       358 G~l~~~y~G--H~~~Il~f~ls~~~~~vvT~-s~D~~a~VF~v  397 (399)
T KOG0296|consen  358 GQLKFTYTG--HQMGILDFALSPQKRLVVTV-SDDNTALVFEV  397 (399)
T ss_pred             cceEEEEec--CchheeEEEEcCCCcEEEEe-cCCCeEEEEec
Confidence            999999998  99999999999999999998 89999888875

>KOG0315|consensus

Probab=100.00  E-value=1.4e-40  Score=263.71  Aligned_cols=275  Identities=18%  Similarity=0.308  Sum_probs=232.6

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---CCccEEeecccC
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---SLEHLHTFTGHK  231 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~~~~~~~~~~~~  231 (454)
                      -+|++++.|.+|++|...++.+..+++      ...+.|+.+.+.|++++||+++. -.|++||+   +..++.++.+|+
T Consensus        11 viLvsA~YDhTIRfWqa~tG~C~rTiq------h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~   83 (311)
T KOG0315|consen   11 VILVSAGYDHTIRFWQALTGICSRTIQ------HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHT   83 (311)
T ss_pred             eEEEeccCcceeeeeehhcCeEEEEEe------cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccC
Confidence            589999999999999999999999887      36678999999999999999885 68999999   334789999999


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--E
Q psy17902        232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--V  309 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~  309 (454)
                      ..|+++.|..+|+.+++|+.||+++|||++...+.+.+ .|..+|+++..+|+..-|++|..+|.|++||+....+.  .
T Consensus        84 kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~l  162 (311)
T KOG0315|consen   84 KNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHEL  162 (311)
T ss_pred             CceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCcccccc
Confidence            99999999999999999999999999999996665554 58899999999999999999999999999999987655  3


Q ss_pred             EccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        310 FNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       310 ~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                      .......+..+. .+++.+++++...|.+++|++........+...+.   ...|...+..+.+||++++||++|.|.++
T Consensus       163 iPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k---~~ah~~~il~C~lSPd~k~lat~ssdktv  239 (311)
T KOG0315|consen  163 IPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHK---FQAHNGHILRCLLSPDVKYLATCSSDKTV  239 (311)
T ss_pred             CCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhh---eecccceEEEEEECCCCcEEEeecCCceE
Confidence            333344555554 45677888888999999999977544443333322   22466779999999999999999999999


Q ss_pred             EEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        389 KLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       389 ~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +||+..+. +....+.+  |...+.+++||.||+||+++ +.|+.+++|+...+.+
T Consensus       240 ~iwn~~~~~kle~~l~g--h~rWvWdc~FS~dg~YlvTa-ssd~~~rlW~~~~~k~  292 (311)
T KOG0315|consen  240 KIWNTDDFFKLELVLTG--HQRWVWDCAFSADGEYLVTA-SSDHTARLWDLSAGKE  292 (311)
T ss_pred             EEEecCCceeeEEEeec--CCceEEeeeeccCccEEEec-CCCCceeecccccCce
Confidence            99999887 44455555  78899999999999999999 8899999999987754

>KOG0285|consensus

Probab=100.00  E-value=9.5e-41  Score=277.79  Aligned_cols=299  Identities=17%  Similarity=0.312  Sum_probs=261.8

Q ss_pred             hhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC
Q psy17902        123 ADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN  202 (454)
Q Consensus       123 ~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  202 (454)
                      ......+-...+.+.|  |.+.|.|+++.|...+|++|+.|++|.|||+.+++...++.      +|...|..+++|+-.
T Consensus       134 rPeWHapwKl~rVi~g--HlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkltlt------Ghi~~vr~vavS~rH  205 (460)
T KOG0285|consen  134 RPEWHAPWKLYRVISG--HLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLT------GHIETVRGVAVSKRH  205 (460)
T ss_pred             CccccCcceehhhhhh--ccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeec------chhheeeeeeecccC
Confidence            3344445557888999  99999999999999999999999999999999999888877      799999999999999


Q ss_pred             cEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902        203 ELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  281 (454)
                      .||++++.|+.|+.||+ ..+.+..+.+|-..|.|++.+|.-..|++|+.|.+++|||+++...+..+.+|..+|.++.+
T Consensus       206 pYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~  285 (460)
T KOG0285|consen  206 PYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMC  285 (460)
T ss_pred             ceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEe
Confidence            99999999999999999 78888999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      .|-+..+++|+.|++|++||++.++.. .+..|...+.+++..+...+++.+.-..|+-|++..+..++.+..       
T Consensus       286 ~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsg-------  358 (460)
T KOG0285|consen  286 QPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSG-------  358 (460)
T ss_pred             ecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhcccc-------
Confidence            999999999999999999999999877 777888888888877765555444455699999999888877553       


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC------CCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------PLSGVINSLVFTSDHKHLVAGIGTEHRFG  434 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~  434 (454)
                        |..-|++++...|+ ++++|+.+|.+.+||..++...+.+...      .....|++.||...|..|+++ ..|.+|.
T Consensus       359 --h~~iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~-eadKtIk  434 (460)
T KOG0285|consen  359 --HNAIINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITG-EADKTIK  434 (460)
T ss_pred             --ccceeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEec-cCCcceE
Confidence              44449999988776 8889999999999999998666555332      234568999999999999999 8999999


Q ss_pred             eeeeeC
Q psy17902        435 RWKTIK  440 (454)
Q Consensus       435 ~W~~~~  440 (454)
                      +|.-..
T Consensus       435 ~~keDe  440 (460)
T KOG0285|consen  435 MYKEDE  440 (460)
T ss_pred             EEeccc
Confidence            998644

>KOG0284|consensus

Probab=100.00  E-value=7.9e-42  Score=288.82  Aligned_cols=283  Identities=20%  Similarity=0.332  Sum_probs=249.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -.-+|..+.|.|+|+.|++|+..|.+.+|+..+...      ......|..+|.++.|++++.++++|+.+|.|++|+.+
T Consensus        95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnF------EtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn  168 (464)
T KOG0284|consen   95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNF------ETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN  168 (464)
T ss_pred             cccceeeEEEcCCCceeEeecccccEEEecCceeeH------HHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccc
Confidence            345799999999999999999999999999854332      22233799999999999999999999999999999998


Q ss_pred             CccEEeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        221 LEHLHTFTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       221 ~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      ...++.+..|. ..|.+++|+|+...|++++.||+|+|||....+.-..+.+|.-.|.+++|+|...+|++|+.|..|++
T Consensus       169 mnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKl  248 (464)
T KOG0284|consen  169 MNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKL  248 (464)
T ss_pred             hhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEe
Confidence            88888887766 89999999999999999999999999999988888888999999999999999999999999999999


Q ss_pred             eeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC-C
Q psy17902        300 WKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN-S  376 (454)
Q Consensus       300 ~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~  376 (454)
                      ||.+++.++ .+.+|...|..+.|. ++++|+++|.|..+++||+++.+.++++..         |...++++.|+|- .
T Consensus       249 WDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~---------Hkkdv~~~~WhP~~~  319 (464)
T KOG0284|consen  249 WDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG---------HKKDVTSLTWHPLNE  319 (464)
T ss_pred             ecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc---------chhhheeeccccccc
Confidence            999999998 888898888777765 678999999999999999998888887764         4555999999994 4


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      .+|.+|+.||.|..|.+....++..+.. .|.+.|++|+|+|-|..|++| +.|..+++|....
T Consensus       320 ~lftsgg~Dgsvvh~~v~~~~p~~~i~~-AHd~~iwsl~~hPlGhil~tg-snd~t~rfw~r~r  381 (464)
T KOG0284|consen  320 SLFTSGGSDGSVVHWVVGLEEPLGEIPP-AHDGEIWSLAYHPLGHILATG-SNDRTVRFWTRNR  381 (464)
T ss_pred             cceeeccCCCceEEEeccccccccCCCc-ccccceeeeeccccceeEeec-CCCcceeeeccCC
Confidence            5899999999999999986666665553 589999999999999888887 8999999997643

>KOG0273|consensus

Probab=100.00  E-value=1.1e-39  Score=280.66  Aligned_cols=277  Identities=22%  Similarity=0.361  Sum_probs=245.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      -+..|++++|+.+|.+||+|+.||.++||+.. +..+.++.      .|.++|.++.|+..|+||++++.|+++.+||. 
T Consensus       234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~-G~l~~tl~------~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~  306 (524)
T KOG0273|consen  234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKD-GNLISTLG------QHKGPIFSLKWNKKGTYILSGGVDGTTILWDAH  306 (524)
T ss_pred             ccCCcceEEecCCCCeEEEeecCcEEEEEecC-chhhhhhh------ccCCceEEEEEcCCCCEEEeccCCccEEEEecc
Confidence            44679999999999999999999999999987 44455554      59999999999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      .+...+.+.-|..+-..+.|-. ...|++++.||.|+|+.+....++.++.+|.++|.+|.|+|.+.+|++++.|++++|
T Consensus       307 ~g~~~q~f~~~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~Tlki  385 (524)
T KOG0273|consen  307 TGTVKQQFEFHSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKI  385 (524)
T ss_pred             CceEEEeeeeccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEe
Confidence            7788888888888877888874 457999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCeEE-EEccccCCeEEEEecC----------CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        300 WKIQEESQL-VFNGHSRGIDMTRRVN----------DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       300 ~d~~~~~~~-~~~~~~~~i~~~~~~~----------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      |+....... .+..|...|..+.|++          +..+++++.|++|++||+..+.+++.+..         |..+|.
T Consensus       386 Ws~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k---------H~~pVy  456 (524)
T KOG0273|consen  386 WSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK---------HQEPVY  456 (524)
T ss_pred             eecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc---------CCCceE
Confidence            998776665 7888988887777653          34689999999999999999999999864         455699


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +++|+|+|+++|+|+.||.|.+|++.+++.++.+.   ..+.|..++|+.+|.+|.++ -.|+.+++.++
T Consensus       457 svafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~---~~~~Ifel~Wn~~G~kl~~~-~sd~~vcvldl  522 (524)
T KOG0273|consen  457 SVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ---GTGGIFELCWNAAGDKLGAC-ASDGSVCVLDL  522 (524)
T ss_pred             EEEecCCCcEEEecCCCCeeEeccccchheeEeec---CCCeEEEEEEcCCCCEEEEE-ecCCCceEEEe
Confidence            99999999999999999999999999999998887   46679999999999999888 57888877765

>KOG0273|consensus

Probab=100.00  E-value=9e-40  Score=281.28  Aligned_cols=289  Identities=21%  Similarity=0.355  Sum_probs=250.3

Q ss_pred             CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeccc----CCc----ccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        141 HRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSS----PFV----KTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~----~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      |..+|.+++|+|-.. .|++|+.|-..++|++.........    ...    .........|++++|+.+|.+||+|+.|
T Consensus       177 ~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~  256 (524)
T KOG0273|consen  177 HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSED  256 (524)
T ss_pred             CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecC
Confidence            999999999999766 8999999999999998752111111    000    0111234579999999999999999999


Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      |.+++|+..+..+.++..|.++|.++.|+..|++|++++.|+++.+||..++...+.+.-|..+-..+.|-. ..-++++
T Consensus       257 G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~-~~~F~ts  335 (524)
T KOG0273|consen  257 GEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQS-NDEFATS  335 (524)
T ss_pred             cEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEec-CceEeec
Confidence            999999999999999999999999999999999999999999999999999999988888988877889974 4567889


Q ss_pred             eCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        292 GTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      +.|+.|+|+.+....+. .+.+|.+.|.++.|.+ +.+|++++.|++++||.+......+.+..         |...|..
T Consensus       336 ~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~---------Hskei~t  406 (524)
T KOG0273|consen  336 STDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQA---------HSKEIYT  406 (524)
T ss_pred             CCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhh---------hccceee
Confidence            99999999999887777 8889999999999875 67888999999999999988888877765         4445999


Q ss_pred             EEEecCCC---------EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        370 VACLHNSD---------LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       370 ~~~s~~~~---------~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +.|+|.|.         .|++++.|++|++||+..+.++..+..  |..+|.+++|||+|++||+| +.|+.|.+|....
T Consensus       407 ~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~k--H~~pVysvafS~~g~ylAsG-s~dg~V~iws~~~  483 (524)
T KOG0273|consen  407 IKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMK--HQEPVYSVAFSPNGRYLASG-SLDGCVHIWSTKT  483 (524)
T ss_pred             EeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeecc--CCCceEEEEecCCCcEEEec-CCCCeeEeccccc
Confidence            99999653         799999999999999999999999875  99999999999999999999 8999999998765


Q ss_pred             CC
Q psy17902        441 GV  442 (454)
Q Consensus       441 ~~  442 (454)
                      +.
T Consensus       484 ~~  485 (524)
T KOG0273|consen  484 GK  485 (524)
T ss_pred             hh
Confidence            43

>KOG0282|consensus

Probab=100.00  E-value=1.1e-40  Score=288.00  Aligned_cols=294  Identities=17%  Similarity=0.261  Sum_probs=250.0

Q ss_pred             CceeEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEE
Q psy17902        129 ATVVCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVA  206 (454)
Q Consensus       129 ~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  206 (454)
                      +...+..|.|  |+..|+++.|.| .+.+|++++.|+.|+||++-. +.++.++.      +|..+|.+++|+++|..++
T Consensus       203 Pkk~~~~~~g--H~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~------gH~k~Vrd~~~s~~g~~fL  274 (503)
T KOG0282|consen  203 PKKLSHNLSG--HTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFK------GHRKPVRDASFNNCGTSFL  274 (503)
T ss_pred             cHhheeeccC--CccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhh------cchhhhhhhhccccCCeee
Confidence            4457888999  999999999999 899999999999999999876 66666665      7999999999999999999


Q ss_pred             EecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        207 SGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       207 ~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      +++.|+.|++||+ +++++..+. ....++|+.|+|++ +.+++|+.|+.|+.||+++++.++.+..|-+.|..+.|.++
T Consensus       275 S~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~  353 (503)
T KOG0282|consen  275 SASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE  353 (503)
T ss_pred             eeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccC
Confidence            9999999999999 667766665 45678999999988 89999999999999999999999999999999999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEEEEccccC--Ce-EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSR--GI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      |..+++++.|++++||+.+.+..+.+.....  .+ .+...|++..+++-+.|..|.+|.+...-.........++.   
T Consensus       354 g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~---  430 (503)
T KOG0282|consen  354 GRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHS---  430 (503)
T ss_pred             CceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhccee---
Confidence            9999999999999999999887774333222  22 23445678899999999999999876543333322222221   


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                       -.++-..+.|||||.+|++|+.||.+.+||..+.+.+..+..  |.+++..+.|+|...-.++++|.+|.|.+|+
T Consensus       431 -vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka--h~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  431 -VAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA--HDQPCIGVDWHPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             -ccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc--CCcceEEEEecCCCcceeEecccCceeEecC
Confidence             244578899999999999999999999999999999999987  8899999999998877666669999999996

>KOG0263|consensus

Probab=100.00  E-value=5.6e-40  Score=300.08  Aligned_cols=288  Identities=20%  Similarity=0.379  Sum_probs=243.0

Q ss_pred             hccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE
Q psy17902        126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV  205 (454)
Q Consensus       126 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  205 (454)
                      ...+.++.-++..  -...++|..|++++.+||.|..|..|++|.+...+ +..++       +      .++-   ..+
T Consensus       364 ~~lpSic~YT~~n--t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~k-l~~lk-------~------~~~l---~~~  424 (707)
T KOG0263|consen  364 NSLPSICMYTFHN--TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKK-LKKLK-------D------ASDL---SNI  424 (707)
T ss_pred             CCCCcEEEEEEEE--cCCcceeEeecCCcchhhccccccEEEEEecchhh-hcccc-------c------hhhh---ccc
Confidence            3344455555554  56679999999999999999999999999988642 22221       1      1111   112


Q ss_pred             EEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        206 ASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       206 ~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      =+.+.|-.+.+.|. ......++.+|.++|..+.|+|+.++|++++.|++|++|.+.+..++..+.+|..+|+.+.|+|.
T Consensus       425 d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~  504 (707)
T KOG0263|consen  425 DTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR  504 (707)
T ss_pred             cccccchhhhhccccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC
Confidence            23333444666666 45556679999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      |-+++|++.|++.++|......+. .+.+|...+.|+.|+ +..++++||.|.+|++||+.++..++.+..         
T Consensus       505 GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G---------  575 (707)
T KOG0263|consen  505 GYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG---------  575 (707)
T ss_pred             ceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC---------
Confidence            999999999999999999987777 889999999977766 578999999999999999999999988853         


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |..+|++++|||+|++|++|+.||.|.+||+.+++++..+.+  |.+.|.+|.||.||..||++ |.|+.|++||+....
T Consensus       576 H~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~--Ht~ti~SlsFS~dg~vLasg-g~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  576 HKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG--HTGTIYSLSFSRDGNVLASG-GADNSVRLWDLTKVI  652 (707)
T ss_pred             CCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc--ccCceeEEEEecCCCEEEec-CCCCeEEEEEchhhc
Confidence            566699999999999999999999999999999999998887  79999999999999999999 899999999986544


Q ss_pred             ee
Q psy17902        443 KN  444 (454)
Q Consensus       443 ~~  444 (454)
                      .+
T Consensus       653 ~~  654 (707)
T KOG0263|consen  653 EL  654 (707)
T ss_pred             cc
Confidence            43

>KOG0645|consensus

Probab=100.00  E-value=7.8e-38  Score=251.20  Aligned_cols=289  Identities=18%  Similarity=0.350  Sum_probs=235.8

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ...+.+.+  |.+.|..++|+|- |..||+++.|..|++|+...+.......  ....+|...|..++|+|.|++||+++
T Consensus         5 ~~~~~~~g--h~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~--vld~~hkrsVRsvAwsp~g~~La~aS   80 (312)
T KOG0645|consen    5 ILEQKLSG--HKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKT--VLDDGHKRSVRSVAWSPHGRYLASAS   80 (312)
T ss_pred             eeEEeecC--CCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEE--eccccchheeeeeeecCCCcEEEEee
Confidence            45677888  9999999999998 8899999999999999988532211111  11126889999999999999999999


Q ss_pred             CCCcEEEEeC---CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---eeEEEeeccCCceeEEEeec
Q psy17902        210 NNSNIKLWSS---SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       210 ~dg~v~vw~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~  283 (454)
                      .|.++.||.-   ..+++.++.+|...|.|++|+++|.+||+++.|..|-||.+..+   .++..+..|...|..+.|+|
T Consensus        81 FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP  160 (312)
T KOG0645|consen   81 FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP  160 (312)
T ss_pred             ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC
Confidence            9999999986   56778899999999999999999999999999999999998743   56778899999999999999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCe----EEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEES----QLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      ...+|++++.|.+|++|.-....    ...+.+|...+-++.|.+ +..|++++.|++++||-+.+.     ++.     
T Consensus       161 t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~~~-----  230 (312)
T KOG0645|consen  161 TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----LSG-----  230 (312)
T ss_pred             CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----cch-----
Confidence            99999999999999999877322    237888988888888776 779999999999999987522     111     


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC---ceeeEe--ccCCCceeeeEEEEcCC-CCEEEEEecCCCc
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK---RTLEFL--QDIPLSGVINSLVFTSD-HKHLVAGIGTEHR  432 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~--~~~~~~~~v~~l~~s~d-~~~l~~~~~~d~~  432 (454)
                         .|...+..+.|.  ...|++++.|+.|++|.-...   ..+..+  ....|...|++++|.|. ...|+++ |+||.
T Consensus       231 ---~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~-~DDG~  304 (312)
T KOG0645|consen  231 ---MHSRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASG-GDDGI  304 (312)
T ss_pred             ---hcccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeec-CCCce
Confidence               134558899998  448999999999999987643   111111  11237778999999996 4556665 99999


Q ss_pred             eeeeeee
Q psy17902        433 FGRWKTI  439 (454)
Q Consensus       433 i~~W~~~  439 (454)
                      |++|.+.
T Consensus       305 v~~W~l~  311 (312)
T KOG0645|consen  305 VNFWELE  311 (312)
T ss_pred             EEEEEec
Confidence            9999864

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.1e-37  Score=279.22  Aligned_cols=284  Identities=27%  Similarity=0.506  Sum_probs=247.6

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      +.|.+  |.++|++++|+|++++|++++.+|.|.+|++.+........      .|...+..+.|++++++|++++.+|.
T Consensus         3 ~~~~~--h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~~~~   74 (289)
T cd00200           3 RTLKG--HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLK------GHTGPVRDVAASADGTYLASGSSDKT   74 (289)
T ss_pred             hHhcc--cCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEe------cCCcceeEEEECCCCCEEEEEcCCCe
Confidence            45667  99999999999999999999999999999998876544443      47778899999999999999999999


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      |.+|++ ....+..+..|...|.++.|++++.++++++.+|.|.+||+.+++....+..|...|.++.|+|++.++++++
T Consensus        75 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  154 (289)
T cd00200          75 IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS  154 (289)
T ss_pred             EEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc
Confidence            999999 4467788888999999999999988888888899999999998888888888999999999999999999888


Q ss_pred             CCCcEEEeeccCCeEE-EEccccCCeEEEEecCC-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      .++.|++||++.++.. .+..|...+.++.+.++ ..+++++.++.|++||+..+..+..+..         +...+.++
T Consensus       155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~---------~~~~i~~~  225 (289)
T cd00200         155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG---------HENGVNSV  225 (289)
T ss_pred             CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh---------cCCceEEE
Confidence            8999999999977665 56677777777777654 4888999999999999988777666532         34459999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .|+|++.++++++.+|.|++|++.++.....+..  |...|.+++|+|++.+|+++ +.|+.|.+|+
T Consensus       226 ~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~-~~d~~i~iw~  289 (289)
T cd00200         226 AFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSG--HTNSVTSLAWSPDGKRLASG-SADGTIRIWD  289 (289)
T ss_pred             EEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccc--cCCcEEEEEECCCCCEEEEe-cCCCeEEecC
Confidence            9999988999998899999999998888887774  77889999999999999988 8999999996

>KOG0265|consensus

Probab=100.00  E-value=2.4e-38  Score=257.69  Aligned_cols=288  Identities=18%  Similarity=0.333  Sum_probs=242.8

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      -.+.|  |.+.|+.+.|+|+|.+||+|+.|..|.+|+..... ....+.      +|.+.|..+.|.+++..|++++.|.
T Consensus        41 m~l~g--h~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lk------gHsgAVM~l~~~~d~s~i~S~gtDk  112 (338)
T KOG0265|consen   41 MLLPG--HKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLK------GHSGAVMELHGMRDGSHILSCGTDK  112 (338)
T ss_pred             hhcCC--CcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeec------cccceeEeeeeccCCCEEEEecCCc
Confidence            34567  99999999999999999999999999999965432 222222      7999999999999999999999999


Q ss_pred             cEEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +|+.||+ +++.+..++.|...|+++.-+.-| .++.+++.|+++++||+++...++++. ....++++.|...+..+++
T Consensus       113 ~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~s  191 (338)
T KOG0265|consen  113 TVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVIS  191 (338)
T ss_pred             eEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceee
Confidence            9999999 899999999999999999854444 466788999999999999988887764 5678999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcccee-eecccCCCCCCCCCCcE
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHT-IPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~i  367 (454)
                      |+-|+.|++||++.+... .+.+|...|+.+... .+.++++-+.|.++++||++...+-+. +....+....  ...-.
T Consensus       192 ggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hn--feknl  269 (338)
T KOG0265|consen  192 GGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHN--FEKNL  269 (338)
T ss_pred             ccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhh--hhhhc
Confidence            999999999999988777 899999999877755 577899999999999999987655444 2222221100  11226


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      ..++|+|++..+.+|+.|..+++||......+..+.+  |.+.|+++.|+|....|.++ +.|.+|++
T Consensus       270 L~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpG--h~gsvn~~~Fhp~e~iils~-~sdk~i~l  334 (338)
T KOG0265|consen  270 LKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPG--HYGSVNEVDFHPTEPIILSC-SSDKTIYL  334 (338)
T ss_pred             ceeeccCCCCccccccccceEEEeecccccEEEEcCC--cceeEEEeeecCCCcEEEEe-ccCceeEe
Confidence            6789999999999999999999999988888888887  99999999999999999988 78888764

>KOG0286|consensus

Probab=100.00  E-value=6.7e-38  Score=254.18  Aligned_cols=248  Identities=21%  Similarity=0.340  Sum_probs=226.1

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---  263 (454)
                      +|.+.|+++.|++|.++|++++.||.+.|||. ++..++.+.-...-|..++|+|.|+++++|+.|+...||++.+.   
T Consensus        53 GH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~  132 (343)
T KOG0286|consen   53 GHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAE  132 (343)
T ss_pred             ccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccc
Confidence            79999999999999999999999999999999 88888888888889999999999999999999999999999865   


Q ss_pred             ---eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC--CCEEEEEeCCCCE
Q psy17902        264 ---AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN--DQQFITCGEDGTL  337 (454)
Q Consensus       264 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i  337 (454)
                         ...+.+.+|.+.+.|+.|.+ ...|++++.|.+..+||+.+++.+ .+.+|.+.|..+..++  ++.|++|+.|+..
T Consensus       133 g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~a  211 (343)
T KOG0286|consen  133 GNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSA  211 (343)
T ss_pred             ccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccce
Confidence               34567889999999999987 567889999999999999999888 8999999998887765  7899999999999


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      ++||++.+.+.+++..         |..-|+++.|.|+|.-|++|+.|++.++||++..+.+..+.......+|++++||
T Consensus       212 klWD~R~~~c~qtF~g---------hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS  282 (343)
T KOG0286|consen  212 KLWDVRSGQCVQTFEG---------HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS  282 (343)
T ss_pred             eeeeccCcceeEeecc---------cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence            9999999999999875         4455999999999999999999999999999999999888876677899999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCCCeeEE
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKGVKNTV  446 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~~~~~~  446 (454)
                      ..|++|++| ..|.++.+||..++.+.++
T Consensus       283 ~SGRlLfag-y~d~~c~vWDtlk~e~vg~  310 (343)
T KOG0286|consen  283 KSGRLLFAG-YDDFTCNVWDTLKGERVGV  310 (343)
T ss_pred             ccccEEEee-ecCCceeEeeccccceEEE
Confidence            999999999 8999999999988766544

>KOG0266|consensus

Probab=100.00  E-value=1.4e-37  Score=292.05  Aligned_cols=285  Identities=22%  Similarity=0.401  Sum_probs=248.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |...|.|+.|+++|++|++++.++.+++|+..+..  ....+      .+|...|.+++|+|++.++++++.|++|+|||
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l------~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd  231 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLREL------SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWD  231 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccc------cccccceeeeEECCCCcEEEEecCCceEEEee
Confidence            48889999999999999999999999999996665  33332      37899999999999999999999999999999


Q ss_pred             C--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        219 S--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       219 ~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      +  .+..+.++.+|...|++++|+|+++++++|+.|++|+|||+++++++..+.+|...|++++|++++++|++++.|+.
T Consensus       232 ~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~  311 (456)
T KOG0266|consen  232 LKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGT  311 (456)
T ss_pred             ccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCcc
Confidence            9  34788999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeccCCeE--E-EEccccCC--eEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        297 VRVWKIQEESQ--L-VFNGHSRG--IDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       297 i~i~d~~~~~~--~-~~~~~~~~--i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      |++||+.++..  . .+..+...  +.++.+ +++.++++++.|+.+++||+..+.....+..+...      ...+.+.
T Consensus       312 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~------~~~~~~~  385 (456)
T KOG0266|consen  312 IRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL------VRCIFSP  385 (456)
T ss_pred             EEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc------ceeEecc
Confidence            99999999983  3 45555444  666666 57889999999999999999999888877654432      1235566


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC-ceeeeEEEEcCCCCEEEEEe-cCCCceeeeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDHKHLVAGI-GTEHRFGRWKTI  439 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~~~~-~~d~~i~~W~~~  439 (454)
                      ..++.+.++++|+.|+.|++|++.++..+..+..  | ...+..++|+|...++++++ ..|+.+++|...
T Consensus       386 ~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~--h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  386 TLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEG--HSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             cccCCCCeEEEEeCCceEEEEeCCccchhhhhcC--CCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence            6688999999999999999999999888888887  6 88899999999999998883 168999999764

>KOG0291|consensus

Probab=100.00  E-value=4.7e-37  Score=278.81  Aligned_cols=292  Identities=18%  Similarity=0.364  Sum_probs=250.3

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCC-CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKD-GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .++.+.-  -..+|..++|+..|.+||.||.. |.+.||+.++...+....      +|...+++++++|||+++|+|+.
T Consensus       299 lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQ------gH~~~i~~l~YSpDgq~iaTG~e  370 (893)
T KOG0291|consen  299 LIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQ------GHSDRITSLAYSPDGQLIATGAE  370 (893)
T ss_pred             EEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecc------ccccceeeEEECCCCcEEEeccC
Confidence            5566666  66789999999999999999876 899999998876665554      79999999999999999999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CCceeEEEeecCCCEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QSAITSLDILAKNRVI  288 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l  288 (454)
                      ||.|+|||. .+-++.+|..|+..|+.+.|+..++.+++++.||+|+.||+...+..+++... .-...|++..|.|.++
T Consensus       371 DgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV  450 (893)
T KOG0291|consen  371 DGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELV  450 (893)
T ss_pred             CCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEE
Confidence            999999999 88899999999999999999999999999999999999999999888888643 3456788889999999


Q ss_pred             EEeeCCC-cEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC-ccceeeecccCCCCCCCCC
Q psy17902        289 SSGGTDK-SVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       289 ~~~~~dg-~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~  364 (454)
                      ++|+.|. .|++|++++++.+ .+.+|.++|.++.+. .+..|++++.|.+|++||+-.. ....++...+.        
T Consensus       451 ~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sd--------  522 (893)
T KOG0291|consen  451 CAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSD--------  522 (893)
T ss_pred             EeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccc--------
Confidence            9998876 6999999999999 899999999987665 5779999999999999998654 34445544332        


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC------------------CCceeeeEEEEcCCCCEEEEE
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------------------PLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------------------~~~~~v~~l~~s~d~~~l~~~  426 (454)
                        +..++|+|+|+-||+++.||.|.+||...+.....+.+.                  ......+++++|+||.+|++|
T Consensus       523 --vl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAg  600 (893)
T KOG0291|consen  523 --VLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAG  600 (893)
T ss_pred             --eeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEec
Confidence              899999999999999999999999999876554333221                  123568999999999999999


Q ss_pred             ecCCCceeeeeeeCCC
Q psy17902        427 IGTEHRFGRWKTIKGV  442 (454)
Q Consensus       427 ~~~d~~i~~W~~~~~~  442 (454)
                       |....|+++++..+.
T Consensus       601 -G~sn~iCiY~v~~~v  615 (893)
T KOG0291|consen  601 -GESNSICIYDVPEGV  615 (893)
T ss_pred             -CCcccEEEEECchhh
Confidence             999999999987664

>KOG0276|consensus

Probab=100.00  E-value=5.7e-38  Score=279.03  Aligned_cols=279  Identities=21%  Similarity=0.348  Sum_probs=252.4

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .|..  |+..|.|+.|+|...+++++-.+|.|.|||.++...+..+..      ...+|.+..|-+..+++++|+.|..|
T Consensus         8 k~~~--rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV------~~~PvRa~kfiaRknWiv~GsDD~~I   79 (794)
T KOG0276|consen    8 KFQS--RSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEV------SEVPVRAAKFIARKNWIVTGSDDMQI   79 (794)
T ss_pred             Hhhc--cCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeee------cccchhhheeeeccceEEEecCCceE
Confidence            3444  999999999999999999999999999999999888887764      66789999999999999999999999


Q ss_pred             EEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCC-CEEEEe
Q psy17902        215 KLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKN-RVISSG  291 (454)
Q Consensus       215 ~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~  291 (454)
                      +||+. +...+..|..|.+.|.+++.+|...+++++|.|-+|++||.+.. .+.+++.+|...|++++|+|.. +.++++
T Consensus        80 rVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~  159 (794)
T KOG0276|consen   80 RVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASA  159 (794)
T ss_pred             EEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeee
Confidence            99999 88999999999999999999999999999999999999999764 6778999999999999999965 889999


Q ss_pred             eCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCC---EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        292 GTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      +.|++|+||.+.+..+. ++.+|..+|+|+.+.+++   +|++|+.|.+|+|||..+..+++++..+         ..-|
T Consensus       160 sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGH---------t~Nv  230 (794)
T KOG0276|consen  160 SLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGH---------TNNV  230 (794)
T ss_pred             eccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcc---------cccc
Confidence            99999999999987776 889999999999988766   9999999999999999999999998753         3349


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF  433 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i  433 (454)
                      +.+.|+|.-.+|++|+.||+|+||+..+.+....+..  ....|.+++-.+.++.+++| .+.|.|
T Consensus       231 s~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~--gleRvW~I~~~k~~~~i~vG-~Deg~i  293 (794)
T KOG0276|consen  231 SFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNY--GLERVWCIAAHKGDGKIAVG-FDEGSV  293 (794)
T ss_pred             eEEEecCCCcEEEEecCCccEEEecCcceehhhhhhc--CCceEEEEeecCCCCeEEEe-ccCCcE
Confidence            9999999999999999999999999988887777765  56789999999988888887 455554

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.2e-36  Score=306.77  Aligned_cols=287  Identities=18%  Similarity=0.242  Sum_probs=234.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec-ccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC-SSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~  218 (454)
                      |.+.|++++|+|++++||+|+.||.|+||++....... ..........+...|.+++|++ .+.+|++++.||.|++||
T Consensus       482 ~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd  561 (793)
T PLN00181        482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWD  561 (793)
T ss_pred             CCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEE
Confidence            89999999999999999999999999999976421100 0000000012345789999987 478999999999999999


Q ss_pred             C-CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEee-cCCCEEEEeeCCC
Q psy17902        219 S-SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL-AKNRVISSGGTDK  295 (454)
Q Consensus       219 ~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg  295 (454)
                      + ++..+..+.+|...|++++|+| ++.+|++|+.||+|++||+.++..+..+..+ ..|.++.|+ +++.+|++|+.||
T Consensus       562 ~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg  640 (793)
T PLN00181        562 VARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADH  640 (793)
T ss_pred             CCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCC
Confidence            9 6777888899999999999997 7889999999999999999999888887654 679999995 5689999999999


Q ss_pred             cEEEeeccCCeE--EEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC------ccceeeecccCCCCCCCCCCcE
Q psy17902        296 SVRVWKIQEESQ--LVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK------VPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       296 ~i~i~d~~~~~~--~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      .|++||++....  ..+.+|...+..+.+.++..|++++.|++|++||+...      .++..+.         .|...+
T Consensus       641 ~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~---------gh~~~i  711 (793)
T PLN00181        641 KVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFM---------GHTNVK  711 (793)
T ss_pred             eEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEc---------CCCCCe
Confidence            999999987653  36778999999999988899999999999999999753      2333332         245668


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec-----------cCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-----------DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----------~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      .+++|+|++.+|++|+.||.|++|+.....++..+.           ...+...|.+++|+|++..|+++ +.+|.|++|
T Consensus       712 ~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~-~~dG~I~i~  790 (793)
T PLN00181        712 NFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAA-NSTGNIKIL  790 (793)
T ss_pred             eEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEe-cCCCcEEEE
Confidence            999999999999999999999999987654332211           11245679999999999999998 789999999


Q ss_pred             ee
Q psy17902        437 KT  438 (454)
Q Consensus       437 ~~  438 (454)
                      +.
T Consensus       791 ~~  792 (793)
T PLN00181        791 EM  792 (793)
T ss_pred             ec
Confidence            85

>KOG0318|consensus

Probab=100.00  E-value=1.5e-36  Score=264.92  Aligned_cols=297  Identities=19%  Similarity=0.257  Sum_probs=236.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....++.  |+..|.|+.|+|||.++++++.||.|.+||-.+++.+..+.-   ..+|.+.|.+++|+||+..+++++.|
T Consensus       182 Fk~s~r~--HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfalsWsPDs~~~~T~SaD  256 (603)
T KOG0318|consen  182 FKSSFRE--HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFALSWSPDSTQFLTVSAD  256 (603)
T ss_pred             eeecccc--cccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEEEECCCCceEEEecCC
Confidence            4556666  999999999999999999999999999999999998877653   34799999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccC---CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHK---APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      .+++|||+ ....+.++....   .....+.|.  +..|++.+.+|+|.+++......+..+.+|...|+++..+|++.+
T Consensus       257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~  334 (603)
T KOG0318|consen  257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKT  334 (603)
T ss_pred             ceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCE
Confidence            99999999 566666664322   233445565  668999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEEEE--ccccCCeEE----------------------------------------------
Q psy17902        288 ISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDM----------------------------------------------  319 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~----------------------------------------------  319 (454)
                      |++|+.||.|.-|+..++..-.+  ..|...|..                                              
T Consensus       335 i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~  414 (603)
T KOG0318|consen  335 IYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVL  414 (603)
T ss_pred             EEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEc
Confidence            99999999999999865443211  112111111                                              


Q ss_pred             -----------------------------------EEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        320 -----------------------------------TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       320 -----------------------------------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                                                         +..+++..+++|+.||.|+||.+...........       ..|.
T Consensus       415 ~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~-------~~h~  487 (603)
T KOG0318|consen  415 SDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKL-------LEHR  487 (603)
T ss_pred             CCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeee-------eccc
Confidence                                               1223445667777777777777765443222111       1356


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      ..|++++|||++.+||+|...+.|.+||+.+.... .-.-.-|.+.|++++|+|+..++|+| +-|..|.+|.+....+.
T Consensus       488 a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~-~~~w~FHtakI~~~aWsP~n~~vATG-SlDt~Viiysv~kP~~~  565 (603)
T KOG0318|consen  488 AAITDVAYSPDGAYLAAGDASRKVVLYDVASREVK-TNRWAFHTAKINCVAWSPNNKLVATG-SLDTNVIIYSVKKPAKH  565 (603)
T ss_pred             CCceEEEECCCCcEEEEeccCCcEEEEEcccCcee-cceeeeeeeeEEEEEeCCCceEEEec-cccceEEEEEccChhhh
Confidence            77999999999999999999999999999987552 22222389999999999999999998 89999999999877665

>KOG0293|consensus

Probab=100.00  E-value=4.5e-38  Score=266.50  Aligned_cols=303  Identities=16%  Similarity=0.240  Sum_probs=243.2

Q ss_pred             hhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc
Q psy17902        124 DRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE  203 (454)
Q Consensus       124 ~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  203 (454)
                      ....-+....+.|..  |++.|.-+.||++|+|||+++.|.+..+|.+.....   +.+..+..+|..+|..+.||||.+
T Consensus       208 ~~~qip~qt~qil~~--htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdr  282 (519)
T KOG0293|consen  208 GRLQIPSQTWQILQD--HTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDR  282 (519)
T ss_pred             CcccCCchhhhhHhh--CCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCC
Confidence            334444456677888  999999999999999999999999999999876544   233334448999999999999999


Q ss_pred             EEEEecCCCcEEEEeC-CCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CCceeEEE
Q psy17902        204 LVASGDNNSNIKLWSS-SLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QSAITSLD  280 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~  280 (454)
                      +|++|+.+..+.+||+ ++.....+. +|...+.+++|.|||..+++|+.|++|..||++. ..+....+. ...|.+++
T Consensus       283 yLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-n~~~~W~gvr~~~v~dla  361 (519)
T KOG0293|consen  283 YLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-NILGNWEGVRDPKVHDLA  361 (519)
T ss_pred             eEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-chhhcccccccceeEEEE
Confidence            9999999999999999 555554443 3458899999999999999999999999999974 434444443 25689999


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                      +++||+++++.+.|..|++|+..+...........+++....+. +.++++.-.+..|++||+.....+..+..+..   
T Consensus       362 it~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq---  438 (519)
T KOG0293|consen  362 ITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ---  438 (519)
T ss_pred             EcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccc---
Confidence            99999999999999999999998876664445555666666654 55666677899999999998777776654332   


Q ss_pred             CCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        360 SSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       360 ~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                          ...+..-+|-- +..++++||.|+.|+||+..+++++..+.+  |...|++++|+|....+++++|+||+|++|..
T Consensus       439 ----~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG--Hs~~vNcVswNP~~p~m~ASasDDgtIRIWg~  512 (519)
T KOG0293|consen  439 ----GHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG--HSKTVNCVSWNPADPEMFASASDDGTIRIWGP  512 (519)
T ss_pred             ----cceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecC--CcceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence                12244444543 446999999999999999999999999998  88999999999998887777799999999987


Q ss_pred             eCC
Q psy17902        439 IKG  441 (454)
Q Consensus       439 ~~~  441 (454)
                      .+.
T Consensus       513 ~~~  515 (519)
T KOG0293|consen  513 SDN  515 (519)
T ss_pred             Ccc
Confidence            644

>KOG0291|consensus

Probab=100.00  E-value=4.7e-36  Score=272.36  Aligned_cols=298  Identities=20%  Similarity=0.378  Sum_probs=260.5

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC------------------------ceecccCCcc--
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR------------------------SKVCSSPFVK--  184 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~------------------------~~~~~~~~~~--  184 (454)
                      .....|.|  |++.|-++-|..+..-|++.+.||.+.+|.+...                        +....+....  
T Consensus       180 ~~~~~l~g--Hkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~  257 (893)
T KOG0291|consen  180 LFTYALNG--HKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTK  257 (893)
T ss_pred             cceEeccC--CCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEE
Confidence            45677888  9999999999999999999999999999987621                        1000000000  


Q ss_pred             --cCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-CcEEEEeC
Q psy17902        185 --TDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSND-RSIKVWNI  260 (454)
Q Consensus       185 --~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~  260 (454)
                        ........|++.+|++..+.|++|-.+|...+|.+ ....++.+.-...+|..++|+..|..|+.|+.. |.+.||+.
T Consensus       258 k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweW  337 (893)
T KOG0291|consen  258 KHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEW  337 (893)
T ss_pred             eeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEe
Confidence              00122368999999999999999999999999999 778888888888999999999999999998764 89999999


Q ss_pred             CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEE
Q psy17902        261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLS  338 (454)
Q Consensus       261 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~  338 (454)
                      .+...+....+|...+++++++|||.++++|+.||.|+|||..++-+. ++..|...++.+.+. .++.+++.+-||+|+
T Consensus       338 qsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVR  417 (893)
T KOG0291|consen  338 QSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVR  417 (893)
T ss_pred             eccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEE
Confidence            999999999999999999999999999999999999999999999887 899999999988887 577889999999999


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-cEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-CVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      .||+......+++..+..        ....|++..|.|.++++|+.|. .|.+|++.+|+.+..+.+  |.+||.+++|+
T Consensus       418 AwDlkRYrNfRTft~P~p--------~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsG--HEgPVs~l~f~  487 (893)
T KOG0291|consen  418 AWDLKRYRNFRTFTSPEP--------IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSG--HEGPVSGLSFS  487 (893)
T ss_pred             eeeecccceeeeecCCCc--------eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcC--CCCcceeeEEc
Confidence            999999999888876543        3388999999999999999886 499999999999999998  99999999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      |+|..|+++ ++|.+|++|+....
T Consensus       488 ~~~~~LaS~-SWDkTVRiW~if~s  510 (893)
T KOG0291|consen  488 PDGSLLASG-SWDKTVRIWDIFSS  510 (893)
T ss_pred             cccCeEEec-cccceEEEEEeecc
Confidence            999999998 99999999998765

>KOG0278|consensus

Probab=100.00  E-value=1.5e-37  Score=246.74  Aligned_cols=288  Identities=17%  Similarity=0.280  Sum_probs=258.8

Q ss_pred             eEeccCCCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        134 TKFNGKPHRASITCIAVTS---DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .+..|  |+.+|..++|||   +|-+|++++.||.-.+-+-+++.-+.++.      +|.+.|....++.+....|+++.
T Consensus         8 l~c~g--htrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfe------ghkgavw~~~l~~na~~aasaaa   79 (334)
T KOG0278|consen    8 LTCHG--HTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFE------GHKGAVWSATLNKNATRAASAAA   79 (334)
T ss_pred             eEEcC--CCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeee------ccCcceeeeecCchhhhhhhhcc
Confidence            45677  999999999985   78999999999999999989988888777      89999999999999989999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-eEEEeeccCCceeEEEeecCCCEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-YVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      |=+.+|||. ++..++.|. |...|.+++|+.|.++|++|+.+..++|||++..+ +...+.+|.+.|..+.|....+.|
T Consensus        80 dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~i  158 (334)
T KOG0278|consen   80 DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCI  158 (334)
T ss_pred             cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceE
Confidence            999999998 888888876 88899999999999999999999999999998754 456778999999999999989999


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      ++++.|++||+||.+++..+........++++..+.++.+++....+.|.+||..+...+..+..+..          |.
T Consensus       159 LSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~n----------V~  228 (334)
T KOG0278|consen  159 LSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCN----------VE  228 (334)
T ss_pred             EeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccc----------cc
Confidence            99999999999999999999777777788888888888899999999999999999999988876443          89


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe-ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL-QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +..++|+..++++|+.|+.++.||..++..+..+ .+  |.++|.++.|+|||..-++| +.||+|++|...++..
T Consensus       229 SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkg--h~gpVhcVrFSPdGE~yAsG-SEDGTirlWQt~~~~~  301 (334)
T KOG0278|consen  229 SASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKG--HFGPVHCVRFSPDGELYASG-SEDGTIRLWQTTPGKT  301 (334)
T ss_pred             cccccCCCceEEecCcceEEEEEeccCCceeeecccC--CCCceEEEEECCCCceeecc-CCCceEEEEEecCCCc
Confidence            9999999999999999999999999999888775 44  88999999999999988888 9999999999876543

>KOG0315|consensus

Probab=100.00  E-value=9.3e-36  Score=236.39  Aligned_cols=268  Identities=14%  Similarity=0.307  Sum_probs=222.0

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .+.++++.  ..+.|+.+.+.|++++||+++. ..|++||+.+......    ....+|...|+++.|..+|+++++|+.
T Consensus        31 ~C~rTiqh--~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv----~t~e~h~kNVtaVgF~~dgrWMyTgse  103 (311)
T KOG0315|consen   31 ICSRTIQH--PDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPV----ATFEGHTKNVTAVGFQCDGRWMYTGSE  103 (311)
T ss_pred             eEEEEEec--CccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCce----eEEeccCCceEEEEEeecCeEEEecCC
Confidence            35666666  6778999999999999999886 6899999998765322    222368889999999999999999999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEE
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~  289 (454)
                      ||+++|||+..-.......|..+|+++..+|+...|++|..+|.|++||+....+...+. .....|.++...|+|.+++
T Consensus       104 Dgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~  183 (311)
T KOG0315|consen  104 DGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLA  183 (311)
T ss_pred             CceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEE
Confidence            999999999666666667788999999999999999999999999999999876665543 3457899999999999999


Q ss_pred             EeeCCCcEEEeeccCCeEE-------EEccccCCe-EEEEecCCCEEEEEeCCCCEEEEecCCC-ccceeeecccCCCCC
Q psy17902        290 SGGTDKSVRVWKIQEESQL-------VFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSS  360 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~-------~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~  360 (454)
                      .+...|..++|++-.....       .+..|.+-+ .|..+|+..+|++++.|.+++||+..+. +....+.        
T Consensus       184 a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~--------  255 (311)
T KOG0315|consen  184 AANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLT--------  255 (311)
T ss_pred             EecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEee--------
Confidence            9999999999998764322       566777655 5677778889999999999999999877 2222222        


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                       +|..|+..++||.+|.||++|+.|+++++|++..++.++...+  |..+..+++.
T Consensus       256 -gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g--h~K~~vc~~l  308 (311)
T KOG0315|consen  256 -GHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG--HHKAAVCVAL  308 (311)
T ss_pred             -cCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCC--cccccEEEEe
Confidence             3678899999999999999999999999999999999988887  5555555554

>KOG0281|consensus

Probab=100.00  E-value=8.9e-38  Score=259.28  Aligned_cols=274  Identities=22%  Similarity=0.422  Sum_probs=233.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      ....|+|+.+..  ..+++|..|.+|+|||..+......+.      +|.+.|.|+.|.  .+.|++|+.|.+|+|||+ 
T Consensus       196 ~skgVYClQYDD--~kiVSGlrDnTikiWD~n~~~c~~~L~------GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~  265 (499)
T KOG0281|consen  196 NSKGVYCLQYDD--EKIVSGLRDNTIKIWDKNSLECLKILT------GHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVN  265 (499)
T ss_pred             cCCceEEEEecc--hhhhcccccCceEEeccccHHHHHhhh------cCCCcEEeeecc--ceEEEecCCCceEEEEecc
Confidence            456799999854  689999999999999998877666655      899999999995  459999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      ++.++.++..|...|..+.|+  +.++++++.|.+|.+||+.....   .+.+.+|...|+.+.|+  .++|++++.|.+
T Consensus       266 tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRT  341 (499)
T KOG0281|consen  266 TGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRT  341 (499)
T ss_pred             CCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCce
Confidence            889999999999999999998  56999999999999999987643   34567999999999995  569999999999


Q ss_pred             EEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        297 VRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       297 i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      |++|++.+...+ .+.+|..+|.|+.+ .+.++++|++|.+|++||+..+.++..+..         |..-|.|+.|  +
T Consensus       342 ikvW~~st~efvRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G~cLRvLeG---------HEeLvRciRF--d  409 (499)
T KOG0281|consen  342 IKVWSTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG---------HEELVRCIRF--D  409 (499)
T ss_pred             EEEEeccceeeehhhhcccccceehhc-cCeEEEecCCCceEEEEeccccHHHHHHhc---------hHHhhhheee--c
Confidence            999999999988 88999999988765 577899999999999999999999988875         4445999999  5


Q ss_pred             CCEEEEecCCCcEEEEEcCCCcee-------eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTL-------EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~-------~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      .+.|++|+.||+|++||+..+...       .......|.+.|..+.|.  ...++++ +-|..|.+|++..+..
T Consensus       410 ~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvss-sHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  410 NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISS-SHDDTILIWDFLNGPP  481 (499)
T ss_pred             CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec--ceEEEec-cCCCeEEEEEcCCCCc
Confidence            668999999999999999876322       222223488999999994  5566666 7899999999876543

>KOG0316|consensus

Probab=100.00  E-value=1e-35  Score=234.21  Aligned_cols=286  Identities=17%  Similarity=0.250  Sum_probs=244.8

Q ss_pred             ceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        130 TVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       130 ~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ....+.+..  |.++|.++.|+-+|+|.++++.|.+|++|+...+..+.++.      +|...|..++.+.|+..+++|+
T Consensus         7 tkr~~~l~~--~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYs------ghG~EVlD~~~s~Dnskf~s~G   78 (307)
T KOG0316|consen    7 TKRLSILDC--AQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYS------GHGHEVLDAALSSDNSKFASCG   78 (307)
T ss_pred             chhceeecc--cccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeec------CCCceeeeccccccccccccCC
Confidence            335567778  99999999999999999999999999999999998888877      7999999999999999999999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc--eeEEEeeccCCceeEEEeecCCC
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--AYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      .|..|.+||+ +++.+..+.+|.+.|+.+.|+.+...+++|+.|..+++||.++.  ++++.+......|.++..+  +.
T Consensus        79 gDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~h  156 (307)
T KOG0316|consen   79 GDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EH  156 (307)
T ss_pred             CCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--cc
Confidence            9999999999 88999999999999999999999999999999999999998764  6778887788889999885  67


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      .|++|+.||+++.||++.+.... .....+|+++.++ +++..++++.|+++++.|-.+++.+..+..+...       .
T Consensus       157 eIvaGS~DGtvRtydiR~G~l~s-Dy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~-------e  228 (307)
T KOG0316|consen  157 EIVAGSVDGTVRTYDIRKGTLSS-DYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNM-------E  228 (307)
T ss_pred             EEEeeccCCcEEEEEeecceeeh-hhcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccc-------e
Confidence            89999999999999999988762 2234467777766 5678889999999999999999999888754421       2


Q ss_pred             cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee-eeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV-INSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +-..++++.....+++|+.||.|++||+.....+..+..  +... |++++++|.-..|+++  .++.+..|.
T Consensus       229 ykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~--~~~v~v~dl~~hp~~~~f~~A--~~~~~~~~~  297 (307)
T KOG0316|consen  229 YKLDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSV--VSTVIVTDLSCHPTMDDFITA--TGHGDLFWY  297 (307)
T ss_pred             eeeeeeecccceeEEeccCCceEEEEEeccceeeeeecc--CCceeEEeeecccCccceeEe--cCCceecee
Confidence            244556666667999999999999999999888887775  5555 8999999998888877  356667774

>KOG0284|consensus

Probab=100.00  E-value=9.9e-38  Score=264.10  Aligned_cols=240  Identities=21%  Similarity=0.367  Sum_probs=215.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      |.++|.++.|++++.++++|..+|.|++|+..-.... .+..     .|...|.+++|+|+...+++++.||+|+|||. 
T Consensus       137 HDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk-~~~a-----hh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~  210 (464)
T KOG0284|consen  137 HDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVK-IIQA-----HHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR  210 (464)
T ss_pred             hcccceeEEEccCCCEEEEcCCCceEEecccchhhhH-HhhH-----hhhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence            9999999999999999999999999999987643322 2221     45589999999999999999999999999998 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      ..+.-..+.+|.-.|.++.|+|...+|++||.|..|++||.+++.++.++.+|...|..+.|++++++|+++|.|..+++
T Consensus       211 ~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv  290 (464)
T KOG0284|consen  211 MPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKV  290 (464)
T ss_pred             CCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEE
Confidence            66667778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCeEE-EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        300 WKIQEESQL-VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       300 ~d~~~~~~~-~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      ||+++.+.+ .+.+|...+.++.+++  .++|.+|+.||.|..|.+....++..++..        |...|++++|+|-|
T Consensus       291 ~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i~~A--------Hd~~iwsl~~hPlG  362 (464)
T KOG0284|consen  291 FDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEIPPA--------HDGEIWSLAYHPLG  362 (464)
T ss_pred             EehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccccccccCCCcc--------cccceeeeeccccc
Confidence            999965555 8899999999988774  678999999999999999877777776654        45559999999999


Q ss_pred             CEEEEecCCCcEEEEEcC
Q psy17902        377 DLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~  394 (454)
                      .+|++|+.|.++++|.-.
T Consensus       363 hil~tgsnd~t~rfw~r~  380 (464)
T KOG0284|consen  363 HILATGSNDRTVRFWTRN  380 (464)
T ss_pred             eeEeecCCCcceeeeccC
Confidence            999999999999999754

>KOG0772|consensus

Probab=100.00  E-value=5.5e-36  Score=260.74  Aligned_cols=290  Identities=15%  Similarity=0.218  Sum_probs=227.5

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .|.+  |+..|+++++.|.|..|++|+.|..|++||+......... +....+.....|.++.|++.|..|++.+.....
T Consensus       162 ~l~h--gtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~-fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqa  238 (641)
T KOG0772|consen  162 QLKH--GTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS-FRQLQPCETHQINSLQYSVTGDQILVVSGSAQA  238 (641)
T ss_pred             eccC--CceEEEEeeecCCCceeeeccccceEEEEecccccccchh-hhccCcccccccceeeecCCCCeEEEEecCcce
Confidence            4566  9999999999999999999999999999999865432221 222223455589999999999999988888999


Q ss_pred             EEEeCCCccEE-------------eecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCcee-EEEee-----ccCC
Q psy17902        215 KLWSSSLEHLH-------------TFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAY-VETLF-----GHQS  274 (454)
Q Consensus       215 ~vw~~~~~~~~-------------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-~~~~~-----~~~~  274 (454)
                      +|+|-.+..+.             ..++|...++|.+|+|.. ..+++++.||+++|||++..+. ...+.     +..-
T Consensus       239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv  318 (641)
T KOG0772|consen  239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV  318 (641)
T ss_pred             eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence            99998554433             336899999999999964 6899999999999999976543 23332     3345


Q ss_pred             ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EEccccC--CeEEEEec-CCCEEEEEeCCCCEEEEecCCC-c
Q psy17902        275 AITSLDILAKNRVISSGGTDKSVRVWKIQEESQL----VFNGHSR--GIDMTRRV-NDQQFITCGEDGTLSLWSILKK-V  346 (454)
Q Consensus       275 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~--~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~  346 (454)
                      ++++++|++++++|++|+.||.|.+|+..+....    .-..|..  .|+++.|+ ++++|++-+.|+++++||++.. +
T Consensus       319 ~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  319 PVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             CceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            6899999999999999999999999998653322    4456666  78888876 6789999999999999999875 4


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      ++.......       ....-+.++|||+.++|++|+.      .|++.+||..+...+..+..  ....|..+.|+|.-
T Consensus       399 pL~~~tgL~-------t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i--~~aSvv~~~WhpkL  469 (641)
T KOG0772|consen  399 PLNVRTGLP-------TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDI--STASVVRCLWHPKL  469 (641)
T ss_pred             chhhhcCCC-------ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecC--CCceEEEEeecchh
Confidence            444433221       2333678999999999999864      47899999988888887775  47789999999999


Q ss_pred             CEEEEEecCCCceeeee
Q psy17902        421 KHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~  437 (454)
                      +.|+++ +.||.+.++-
T Consensus       470 NQi~~g-sgdG~~~vyY  485 (641)
T KOG0772|consen  470 NQIFAG-SGDGTAHVYY  485 (641)
T ss_pred             hheeee-cCCCceEEEE
Confidence            999999 5567777664

>KOG0263|consensus

Probab=100.00  E-value=2.5e-36  Score=276.26  Aligned_cols=207  Identities=20%  Similarity=0.438  Sum_probs=194.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.+.|  |.++|+.+.|+|+.++|++++.|+++++|.+.+......+.      +|..+|..+.|+|.|-|+|+++.|
T Consensus       443 ~~~~L~G--H~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~------GH~~PVwdV~F~P~GyYFatas~D  514 (707)
T KOG0263|consen  443 TSRTLYG--HSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYK------GHLAPVWDVQFAPRGYYFATASHD  514 (707)
T ss_pred             eeEEeec--CCCceeeeeecccccceeeccCCcceeeeecccceeEEEec------CCCcceeeEEecCCceEEEecCCC
Confidence            5667899  99999999999999999999999999999999988776666      799999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      ++.++|.. ...+++.+.+|.+.|.|+.|+|+..++++||.|.+|++||+.+|..++.|.||.++|.+++|+|+|.+|++
T Consensus       515 ~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaS  594 (707)
T KOG0263|consen  515 QTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLAS  594 (707)
T ss_pred             ceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEee
Confidence            99999999 78889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCc
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      |+.||.|.+||+.++..+ .+.+|.+.+..+.|+ ++..|++|+.|.+|++||+..-.
T Consensus       595 g~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~  652 (707)
T KOG0263|consen  595 GDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI  652 (707)
T ss_pred             cccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence            999999999999998887 888998888887776 67899999999999999986543

>KOG0275|consensus

Probab=100.00  E-value=5.9e-37  Score=252.31  Aligned_cols=287  Identities=17%  Similarity=0.291  Sum_probs=245.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCccc--CCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKT--DRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      ..+.+.|..|||||+||++|+.||.|.+||..+++....+.+...  ..-+..+|.|+.|+.|..+||+|+.||.|+||.
T Consensus       212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr  291 (508)
T KOG0275|consen  212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR  291 (508)
T ss_pred             cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence            455688999999999999999999999999999876655443221  124677999999999999999999999999999


Q ss_pred             C-CCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        219 S-SLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       219 ~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      + ++.++..|. .|+..|+|+.|+.|+..+++++.|.++++.-+.+|+++..+.+|++.|+...|+++|+.+++++.||+
T Consensus       292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt  371 (508)
T KOG0275|consen  292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT  371 (508)
T ss_pred             EecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCcc
Confidence            9 899999886 89999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeccCCeEE-EEcc--ccCCeEEEE-ec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        297 VRVWKIQEESQL-VFNG--HSRGIDMTR-RV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       297 i~i~d~~~~~~~-~~~~--~~~~i~~~~-~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      |++|+..+..++ .+..  ...++..+. +| +...+++|...++|+|.++ .++.+..+.....      ..+...+..
T Consensus       372 vkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkR------EgGdFi~~~  444 (508)
T KOG0275|consen  372 VKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKR------EGGDFINAI  444 (508)
T ss_pred             EEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCc------cCCceEEEE
Confidence            999999998887 3332  333444333 33 4568999999999999997 4566666654332      233367788


Q ss_pred             EecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .||.|.++.+.+.|+.++.|.+.+|....++..  |...|..++-+|..+.|++- +.||.+.+|.
T Consensus       445 lSpkGewiYcigED~vlYCF~~~sG~LE~tl~V--hEkdvIGl~HHPHqNllAsY-sEDgllKLWk  507 (508)
T KOG0275|consen  445 LSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPV--HEKDVIGLTHHPHQNLLASY-SEDGLLKLWK  507 (508)
T ss_pred             ecCCCcEEEEEccCcEEEEEEeecCceeeeeec--ccccccccccCcccchhhhh-cccchhhhcC
Confidence            999999999999999999999999999888876  77889999999998888877 8999999996

>KOG0313|consensus

Probab=100.00  E-value=4.2e-35  Score=246.07  Aligned_cols=304  Identities=20%  Similarity=0.330  Sum_probs=240.9

Q ss_pred             hhcCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCc
Q psy17902        113 EQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP  192 (454)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  192 (454)
                      .....+...+...+.+|......+    |.+.|.++...  +.+|++|++||.+++||... +....+.      +|.++
T Consensus        80 SsE~~leIEYv~~~~aP~pl~~~~----hdDWVSsv~~~--~~~IltgsYDg~~riWd~~G-k~~~~~~------Ght~~  146 (423)
T KOG0313|consen   80 SSEEILEIEYVEAITAPKPLQCFL----HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKG-KSIKTIV------GHTGP  146 (423)
T ss_pred             ChhheeEEEEEEecCCCCcccccc----chhhhhhhccc--CceEEEeecCCeeEEEecCC-ceEEEEe------cCCcc
Confidence            334445556656665555533322    99999999988  58999999999999999874 4444444      79999


Q ss_pred             eEEEEEeCCC---cEEEEecCCCcEEEEeCC-C----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---
Q psy17902        193 ILALAVANNN---ELVASGDNNSNIKLWSSS-L----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---  261 (454)
Q Consensus       193 v~~~~~~~~~---~~l~~~~~dg~v~vw~~~-~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---  261 (454)
                      |.+++|....   ..+++++.|.++++|.++ +    ..+..-.+|...|-++...++|..+++|+.|.+|.||+..   
T Consensus       147 ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~  226 (423)
T KOG0313|consen  147 IKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDE  226 (423)
T ss_pred             eeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCc
Confidence            9988886433   359999999999999882 2    2233445999999999999999999999999999999932   


Q ss_pred             ----------------------CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEE
Q psy17902        262 ----------------------DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDM  319 (454)
Q Consensus       262 ----------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~  319 (454)
                                            ++.++.++.+|..+|.++.|++ ...+++++.|.+|+.||+.++...........+.+
T Consensus       227 ~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~  305 (423)
T KOG0313|consen  227 EDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNC  305 (423)
T ss_pred             cccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecCcceeE
Confidence                                  1345667889999999999987 77899999999999999999998855555556666


Q ss_pred             EEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCc
Q psy17902        320 TRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       320 ~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~  397 (454)
                      +... ...+|++|+.|..|++||.+++.-......      ..+|.++|.++.|+|... .|++|+.|+++++||+++.+
T Consensus       306 i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s------~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k  379 (423)
T KOG0313|consen  306 ISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQS------LIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK  379 (423)
T ss_pred             eecccccceeeecCCCCceeecCCCCCCCceeEEe------eecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence            6654 567888999999999999988743222211      124788999999999665 78999999999999999886


Q ss_pred             -eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        398 -TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       398 -~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                       ++..+..  |...|.++.|+. +..|++| |.|.+|++....+
T Consensus       380 ~plydI~~--h~DKvl~vdW~~-~~~IvSG-GaD~~l~i~~~~~  419 (423)
T KOG0313|consen  380 APLYDIAG--HNDKVLSVDWNE-GGLIVSG-GADNKLRIFKGSP  419 (423)
T ss_pred             Ccceeecc--CCceEEEEeccC-CceEEec-cCcceEEEecccc
Confidence             8888877  899999999984 6678887 9999999987654

>KOG0292|consensus

Probab=100.00  E-value=4.5e-35  Score=270.22  Aligned_cols=282  Identities=20%  Similarity=0.361  Sum_probs=248.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      .+..|..++|+|...+++++-..|.|++||..-+..+..+.      .|.++|..++|+|...++++|+.|-.|+||+. 
T Consensus         8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFd------eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk   81 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFD------EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYK   81 (1202)
T ss_pred             ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhh------ccCCccceeeecCCCCeEEecCCccEEEEEecc
Confidence            67889999999999999999999999999999888887777      69999999999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      +..++.++.+|-+.|..+.|++.-..++++|.|.+|+||+..+++++..+.||...|.|..|+|...+++++|.|.+|+|
T Consensus        82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV  161 (1202)
T KOG0292|consen   82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV  161 (1202)
T ss_pred             cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence            78889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeccCCe----------------------------EE--EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccc
Q psy17902        300 WKIQEES----------------------------QL--VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       300 ~d~~~~~----------------------------~~--~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ||+..-+                            .+  .+.+|..+|+.+.+++ -..+++|+.|..|++|.+...+.-
T Consensus       162 WDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaW  241 (1202)
T KOG0292|consen  162 WDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW  241 (1202)
T ss_pred             EeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccce
Confidence            9985210                            01  5678888998887776 568889999999999998654332


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                       ....      ..+|.+.|+++-|+|..++|++.|.|++|+|||+.....+.++..  ..+..+.++-+|..+++++|  
T Consensus       242 -EvDt------crgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr--endRFW~laahP~lNLfAAg--  310 (1202)
T KOG0292|consen  242 -EVDT------CRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR--ENDRFWILAAHPELNLFAAG--  310 (1202)
T ss_pred             -eehh------hhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec--cCCeEEEEEecCCcceeeee--
Confidence             2222      123666699999999999999999999999999999999998875  56788999999999988877  


Q ss_pred             CCCceeeeeee
Q psy17902        429 TEHRFGRWKTI  439 (454)
Q Consensus       429 ~d~~i~~W~~~  439 (454)
                      -|+.+.++...
T Consensus       311 HDsGm~VFkle  321 (1202)
T KOG0292|consen  311 HDSGMIVFKLE  321 (1202)
T ss_pred             cCCceEEEEEc
Confidence            56666677665

>KOG0285|consensus

Probab=100.00  E-value=1.5e-35  Score=246.95  Aligned_cols=243  Identities=28%  Similarity=0.475  Sum_probs=221.8

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY  265 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  265 (454)
                      .+|.+.|.|+++.|.+.++++|+.|++|.|||+ +++...++.+|-..|..+++++-..|+++++.|+.|+.||+...+.
T Consensus       148 ~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkv  227 (460)
T KOG0285|consen  148 SGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKV  227 (460)
T ss_pred             hhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhh
Confidence            579999999999999999999999999999999 8888889999999999999999999999999999999999999999


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~  343 (454)
                      ++.+.+|-+.|.|++.+|.-..|++|+.|.+++|||+++...+ .+.+|..+|..+.+. -+..+++|+.|++|++||++
T Consensus       228 IR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~  307 (460)
T KOG0285|consen  228 IRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR  307 (460)
T ss_pred             HHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence            9999999999999999999999999999999999999998877 889999999777665 47789999999999999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      .++...++..         |...+.+++.+|....+|+++.|. |+-|++..+..+..+.+  |.+.|++|+...|| ++
T Consensus       308 agkt~~tlt~---------hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsg--h~~iintl~~nsD~-v~  374 (460)
T KOG0285|consen  308 AGKTMITLTH---------HKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSG--HNAIINTLSVNSDG-VL  374 (460)
T ss_pred             cCceeEeeec---------ccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhcccc--ccceeeeeeeccCc-eE
Confidence            9988877754         445599999999999999999985 99999999988888776  88999999999876 56


Q ss_pred             EEEecCCCceeeeeeeCCCe
Q psy17902        424 VAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ++| +++|.+.+|+...+..
T Consensus       375 ~~G-~dng~~~fwdwksg~n  393 (460)
T KOG0285|consen  375 VSG-GDNGSIMFWDWKSGHN  393 (460)
T ss_pred             EEc-CCceEEEEEecCcCcc
Confidence            667 8999999999877654

>KOG0319|consensus

Probab=100.00  E-value=4e-35  Score=265.84  Aligned_cols=288  Identities=23%  Similarity=0.373  Sum_probs=250.6

Q ss_pred             eEeEeccCCCCCCeEEEEE-cCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAV-TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~-s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ..+.+-|  .++.|..|+| .|+.++||+++..+.+++|++.+.... .++      +|...|.+++...+|-+|++|+.
T Consensus       315 i~k~ivG--~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~------GH~e~vlSL~~~~~g~llat~sK  385 (775)
T KOG0319|consen  315 IVKQIVG--YNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIP------GHTEAVLSLDVWSSGDLLATGSK  385 (775)
T ss_pred             EehhhcC--CchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEe------CchhheeeeeecccCcEEEEecC
Confidence            4566778  8899999998 467899999999999999988876655 222      79999999997778899999999


Q ss_pred             CCcEEEEeCCC-----ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCcee-----EE----EeeccCCc
Q psy17902        211 NSNIKLWSSSL-----EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAY-----VE----TLFGHQSA  275 (454)
Q Consensus       211 dg~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~-----~~----~~~~~~~~  275 (454)
                      |.++++|.++.     .++....+|...|.+++++..+ .+|+++|.|+++++|++...+.     +.    +...|...
T Consensus       386 D~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKd  465 (775)
T KOG0319|consen  386 DKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKD  465 (775)
T ss_pred             CceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhccc
Confidence            99999998722     2345667999999999997654 6899999999999999976211     11    22469999


Q ss_pred             eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        276 ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |+|++++|+..+|+|||.|.+.+||++...... .+.+|..++.++.|.+ +..++++|.|++|+||.+.+..++.++..
T Consensus       466 IN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG  545 (775)
T KOG0319|consen  466 INCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG  545 (775)
T ss_pred             ccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC
Confidence            999999999999999999999999999977666 8999999999998875 67888999999999999999999999974


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF  433 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i  433 (454)
                               |...|..+.|-.+|..|++++.||-|++|++.++.++..+..  |...|++++.+|.+.++++| |.||+|
T Consensus       546 ---------H~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~--H~DrvWaL~~~~~~~~~~tg-g~Dg~i  613 (775)
T KOG0319|consen  546 ---------HTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDA--HNDRVWALSVSPLLDMFVTG-GGDGRI  613 (775)
T ss_pred             ---------ccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhh--ccceeEEEeecCccceeEec-CCCeEE
Confidence                     555599999999999999999999999999999999999987  99999999999999988888 899999


Q ss_pred             eeeeeeC
Q psy17902        434 GRWKTIK  440 (454)
Q Consensus       434 ~~W~~~~  440 (454)
                      .+|.-.+
T Consensus       614 ~~wkD~T  620 (775)
T KOG0319|consen  614 IFWKDVT  620 (775)
T ss_pred             EEeecCc
Confidence            9997654

>KOG0319|consensus

Probab=100.00  E-value=4.1e-35  Score=265.79  Aligned_cols=291  Identities=24%  Similarity=0.394  Sum_probs=242.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc--EEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE--LVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~v~vw~  218 (454)
                      |.+||.-++|+|.+.+|++|+.||.+++||+..+...+.+.      +|.+.|.++.|+|+-.  .|++|..|+.+++||
T Consensus       104 He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fk------G~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwn  177 (775)
T KOG0319|consen  104 HEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFK------GHGGVVSSLLFHPHWNRWLLASGATDGTVRVWN  177 (775)
T ss_pred             cCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEec------CCCceEEEEEeCCccchhheeecCCCceEEEEE
Confidence            99999999999999999999999999999999999888887      7999999999999754  589999999999999


Q ss_pred             CC--CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC----------------------------------
Q psy17902        219 SS--LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED----------------------------------  262 (454)
Q Consensus       219 ~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------------------------------  262 (454)
                      +.  ..++..+..|.+.|++++|.+++..+++++.|..|.+||+.+                                  
T Consensus       178 l~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG  257 (775)
T KOG0319|consen  178 LNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAG  257 (775)
T ss_pred             cccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEec
Confidence            93  335788899999999999999999999999999999999741                                  


Q ss_pred             ---------------------------------------------------------------------------c----
Q psy17902        263 ---------------------------------------------------------------------------R----  263 (454)
Q Consensus       263 ---------------------------------------------------------------------------~----  263 (454)
                                                                                                 |    
T Consensus       258 ~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~  337 (775)
T KOG0319|consen  258 GSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEES  337 (775)
T ss_pred             CCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccc
Confidence                                                                                       0    


Q ss_pred             ------------------eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEE
Q psy17902        264 ------------------AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMT  320 (454)
Q Consensus       264 ------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~  320 (454)
                                        .....+.+|...|.++....+|-+|++|+.|.++++|.+..+...     ...+|...+.++
T Consensus       338 ~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgav  417 (775)
T KOG0319|consen  338 HLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAV  417 (775)
T ss_pred             eEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhccccccccee
Confidence                              001123478888888886567789999999999999988544332     667899998888


Q ss_pred             EecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        321 RRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       321 ~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      ....  ..+|+++|.|++|++|++...+................|...|++++++|+..+|||||.|.+.+||++.....
T Consensus       418 a~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l  497 (775)
T KOG0319|consen  418 AGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRL  497 (775)
T ss_pred             eecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceE
Confidence            7764  45899999999999999977333222111111111224677799999999999999999999999999998899


Q ss_pred             eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       399 ~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +..+.+  |...|.++.|+|..+.|+++ +.|.+|++|...+
T Consensus       498 ~~vLsG--H~RGvw~V~Fs~~dq~laT~-SgD~TvKIW~is~  536 (775)
T KOG0319|consen  498 LGVLSG--HTRGVWCVSFSKNDQLLATC-SGDKTVKIWSIST  536 (775)
T ss_pred             EEEeeC--CccceEEEEeccccceeEec-cCCceEEEEEecc
Confidence            999998  89999999999999999988 8999999998764

>KOG0296|consensus

Probab=100.00  E-value=3.1e-35  Score=245.73  Aligned_cols=261  Identities=15%  Similarity=0.260  Sum_probs=217.7

Q ss_pred             CcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE
Q psy17902        116 GKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA  195 (454)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~  195 (454)
                      |...+.+........ ....+.|  |+..|+|+.||.+|.+||||..+|.|+||...++.....+.      .....|..
T Consensus        83 GgDD~AflW~~~~ge-~~~eltg--HKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~------~e~~dieW  153 (399)
T KOG0296|consen   83 GGDDLAFLWDISTGE-FAGELTG--HKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD------QEVEDIEW  153 (399)
T ss_pred             CCCceEEEEEccCCc-ceeEecC--CCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee------cccCceEE
Confidence            333333333333333 5667888  99999999999999999999999999999999988777664      24557899


Q ss_pred             EEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec---
Q psy17902        196 LAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG---  271 (454)
Q Consensus       196 ~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---  271 (454)
                      +.|+|.+..|++|+.||.+.+|.+ +....+.+.+|+.++++=.|.|+|+.++++..||+|++||+.++.++..+.+   
T Consensus       154 l~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~  233 (399)
T KOG0296|consen  154 LKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG  233 (399)
T ss_pred             EEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc
Confidence            999999999999999999999999 4478889999999999999999999999999999999999998776554430   


Q ss_pred             ------------------------------------------------cCCceeEEEee---cCCCEEEEeeCCCcEEEe
Q psy17902        272 ------------------------------------------------HQSAITSLDIL---AKNRVISSGGTDKSVRVW  300 (454)
Q Consensus       272 ------------------------------------------------~~~~v~~~~~~---~~~~~l~~~~~dg~i~i~  300 (454)
                                                                      +...+.|+.+.   ..=.+.++|+.||+|.||
T Consensus       234 ~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iy  313 (399)
T KOG0296|consen  234 LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIY  313 (399)
T ss_pred             CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEE
Confidence                                                            11112223232   233577889999999999


Q ss_pred             eccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        301 KIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       301 d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      |+..........|..+|..+.|.+..+|++++.+|.|+.||.++++....+..         |...|.+++++|+.++++
T Consensus       314 D~a~~~~R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG~l~~~y~G---------H~~~Il~f~ls~~~~~vv  384 (399)
T KOG0296|consen  314 DLAASTLRHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDARTGQLKFTYTG---------HQMGILDFALSPQKRLVV  384 (399)
T ss_pred             ecccchhheeccCCCceEEEEEcCcchheeeccCceEEeeeccccceEEEEec---------CchheeEEEEcCCCcEEE
Confidence            99998888778888888888888888999999999999999999999999874         555699999999999999


Q ss_pred             EecCCCcEEEEEcC
Q psy17902        381 SGSYDGCVKLWKIT  394 (454)
Q Consensus       381 ~~~~dg~v~iwd~~  394 (454)
                      |+|.|++.+||++.
T Consensus       385 T~s~D~~a~VF~v~  398 (399)
T KOG0296|consen  385 TVSDDNTALVFEVP  398 (399)
T ss_pred             EecCCCeEEEEecC
Confidence            99999999999864

>KOG0265|consensus

Probab=100.00  E-value=3e-34  Score=233.92  Aligned_cols=245  Identities=19%  Similarity=0.351  Sum_probs=214.5

Q ss_pred             CCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc
Q psy17902        186 DRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       186 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  263 (454)
                      ..+|.+.|+.+.|+|+|.+||+|+.|..|.+|++  ..+....+++|.++|..+.|.++++.|++++.|.+|+.||+++|
T Consensus        43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG  122 (338)
T KOG0265|consen   43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETG  122 (338)
T ss_pred             cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccc
Confidence            3589999999999999999999999999999998  55667788999999999999999999999999999999999999


Q ss_pred             eeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEe
Q psy17902        264 AYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWS  341 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd  341 (454)
                      +++..+++|..-|+++.-+.-| .++.+++.|+++++||+++...+........++.+.|.+ +..+++|+-|+.|++||
T Consensus       123 ~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd  202 (338)
T KOG0265|consen  123 KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWD  202 (338)
T ss_pred             eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCceeeec
Confidence            9999999999999999855555 577889999999999999988886666666777777764 67899999999999999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC----ceeeEeccCCCcee--eeEEE
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK----RTLEFLQDIPLSGV--INSLV  415 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~--v~~l~  415 (454)
                      ++.+...+.+..         |...|+.+..+|+|.++.+-+.|.+|++||+...    +++..+.+..|.-.  ...++
T Consensus       203 ~r~~d~~~~lsG---------h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cs  273 (338)
T KOG0265|consen  203 LRKNDGLYTLSG---------HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCS  273 (338)
T ss_pred             cccCcceEEeec---------ccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceee
Confidence            999999988874         5566999999999999999999999999999754    55777776555444  45679


Q ss_pred             EcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        416 FTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       416 ~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |||++.++-++ +.|..+++|+...
T Consensus       274 wsp~~~~i~ag-s~dr~vyvwd~~~  297 (338)
T KOG0265|consen  274 WSPNGTKITAG-SADRFVYVWDTTS  297 (338)
T ss_pred             ccCCCCccccc-cccceEEEeeccc
Confidence            99999999888 8999999999753

>KOG0283|consensus

Probab=100.00  E-value=1.6e-34  Score=266.64  Aligned_cols=295  Identities=19%  Similarity=0.263  Sum_probs=224.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCccc-----CCCCCCceEEEEEeC-----CCcEEEEecC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKT-----DRKSYPPILALAVAN-----NNELVASGDN  210 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~-----~~~~l~~~~~  210 (454)
                      |.+.|.+|.||+||+|||+||.||.|+||.+........ .....     .....+.+..+..++     .....-.+..
T Consensus       266 h~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~-~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  266 HKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRV-AEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             cCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcc-cccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            999999999999999999999999999998876332111 00000     000000111111111     1111222222


Q ss_pred             CCcEEE----EeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC-C
Q psy17902        211 NSNIKL----WSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK-N  285 (454)
Q Consensus       211 dg~v~v----w~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~  285 (454)
                      ...+.+    +-+..+++..+.+|.+.|..|.|+.+ ++|++++.|.+|++|++....++..| .|...|+|++|+|- .
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfVTcVaFnPvDD  422 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF-SHNDFVTCVAFNPVDD  422 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE-ecCCeeEEEEecccCC
Confidence            223222    22356788899999999999999965 59999999999999999999999888 59999999999995 5


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      ++|++|+.||.|+||++...+..........|+.+++ |+|+..++|+.+|.+++|+....+................+.
T Consensus       423 ryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~  502 (712)
T KOG0283|consen  423 RYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGK  502 (712)
T ss_pred             CcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCc
Confidence            8999999999999999999888877666677777665 467889999999999999998888777666554332222333


Q ss_pred             CcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        365 NWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       365 ~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                       .|+.+.|.|... .|++.+.|..|+|||..+..++..+++......-....|+.||++|+++ ++|..|++|+...
T Consensus       503 -rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~-seDs~VYiW~~~~  577 (712)
T KOG0283|consen  503 -RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSA-SEDSWVYIWKNDS  577 (712)
T ss_pred             -eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEe-ecCceEEEEeCCC
Confidence             699999998544 5778888999999999888899999887666667788999999999999 7999999999743

>KOG0316|consensus

Probab=100.00  E-value=2.3e-34  Score=226.64  Aligned_cols=242  Identities=17%  Similarity=0.309  Sum_probs=213.9

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      .+.++|.++.|+-+|+|.++++.|.+|++|+. .+..++++.+|...|..++.+.|+..|++|+.|..|.+||+++|+.+
T Consensus        15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~   94 (307)
T KOG0316|consen   15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVD   94 (307)
T ss_pred             ccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeee
Confidence            57889999999999999999999999999999 89999999999999999999999999999999999999999999999


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                      +.+.+|.+.|+.+.|+.+...+++|+.|.++++||.++....   .+......+..+.. .+..+++|+.||+++.||++
T Consensus        95 Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v-~~heIvaGS~DGtvRtydiR  173 (307)
T KOG0316|consen   95 RRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDV-AEHEIVAGSVDGTVRTYDIR  173 (307)
T ss_pred             eecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEe-cccEEEeeccCCcEEEEEee
Confidence            999999999999999999999999999999999999875433   33334444544433 56679999999999999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      .+.....+.           ..+|+++.|+++++.+++++.|++|++.|-.+|+.+..+.++.....-..++++....++
T Consensus       174 ~G~l~sDy~-----------g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV  242 (307)
T KOG0316|consen  174 KGTLSSDYF-----------GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHV  242 (307)
T ss_pred             cceeehhhc-----------CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeE
Confidence            987665543           223999999999999999999999999999999999999986666667788999888888


Q ss_pred             EEEecCCCceeeeeeeCCC
Q psy17902        424 VAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++| +.||.|++|+...+.
T Consensus       243 ~sg-SEDG~Vy~wdLvd~~  260 (307)
T KOG0316|consen  243 FSG-SEDGKVYFWDLVDET  260 (307)
T ss_pred             Eec-cCCceEEEEEeccce
Confidence            887 999999999987653

>KOG0647|consensus

Probab=100.00  E-value=3.8e-33  Score=227.64  Aligned_cols=301  Identities=15%  Similarity=0.227  Sum_probs=231.4

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      -.+.|.+|+||| ...++++|+.||+|++|+++.. ....     .....|.++|.+++|+.+|..+++|+.|+.+++||
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~-----ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wD  100 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVP-----KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWD  100 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccc-----hhhhccCCCeEEEEEccCCceEEeeccCCceEEEE
Confidence            678899999999 5667779999999999999874 3222     22236888999999999999999999999999999


Q ss_pred             CCCccEEeecccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        219 SSLEHLHTFTGHKAPITGLAISFECD--TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       219 ~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      +....+..+..|.++|.++.|-+...  .|++||.|.+|+.||++....+.++. ....+.++..  -..+++++..+..
T Consensus       101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~-LPeRvYa~Dv--~~pm~vVata~r~  177 (347)
T KOG0647|consen  101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQ-LPERVYAADV--LYPMAVVATAERH  177 (347)
T ss_pred             ccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeee-ccceeeehhc--cCceeEEEecCCc
Confidence            97778889999999999999987654  89999999999999999998888775 4556776665  3568888999999


Q ss_pred             EEEeeccCCeEE---EEccccCCeEEE-EecCCCEEEEEeCCCCEEEEecCCC--ccceeeecccCCCCCCCCCCcEEEE
Q psy17902        297 VRVWKIQEESQL---VFNGHSRGIDMT-RRVNDQQFITCGEDGTLSLWSILKK--VPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       297 i~i~d~~~~~~~---~~~~~~~~i~~~-~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      |.+|+|+.+...   ......-.+.++ ++.+.+.++.|+-.|.+-|..+..+  +.-.++..+.........-..|++|
T Consensus       178 i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi  257 (347)
T KOG0647|consen  178 IAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSI  257 (347)
T ss_pred             EEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecce
Confidence            999999876543   111112233343 4556667799999999999998876  3444455444322222235669999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEE
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIID  450 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~  450 (454)
                      +|+|.-..|+|++.||++.+||-.....+.....  +..+|++++|+.+|.+++.+.|.|-.-.-=-..+..++.|.+..
T Consensus       258 ~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~--~~qpItcc~fn~~G~ifaYA~gYDWSkGhe~~n~~~~~~I~l~~  335 (347)
T KOG0647|consen  258 AFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSET--HPQPITCCSFNRNGSIFAYALGYDWSKGHEGNNPQYKPQIFLHP  335 (347)
T ss_pred             EeecccceEEEecCCceEEEecchhhhhhhccCc--CCCccceeEecCCCCEEEEEeecccccccccCCCCCCCeEEEee
Confidence            9999999999999999999999887766666554  88999999999999999999888733222222334455565554


Q ss_pred             e
Q psy17902        451 I  451 (454)
Q Consensus       451 ~  451 (454)
                      .
T Consensus       336 ~  336 (347)
T KOG0647|consen  336 V  336 (347)
T ss_pred             c
Confidence            3

>KOG0318|consensus

Probab=100.00  E-value=6e-33  Score=242.48  Aligned_cols=296  Identities=14%  Similarity=0.268  Sum_probs=252.0

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  211 (454)
                      ...|.+  |..+++-..|+|.|.|+|+|...|.|+|||......+....+    +...++|..|+|+.+++.|++.+.. 
T Consensus        52 ~~iYtE--H~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef----~v~aG~I~Di~Wd~ds~RI~avGEGr  125 (603)
T KOG0318|consen   52 VDIYTE--HAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEF----QVLAGPIKDISWDFDSKRIAAVGEGR  125 (603)
T ss_pred             eeeecc--ccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeee----eecccccccceeCCCCcEEEEEecCc
Confidence            566778  999999999999999999999999999999876444332221    2356799999999999988887653 


Q ss_pred             ---CcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 ---SNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 ---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                         |.+.+|| ++..+-.+.+|...|+++.|-|... ++++|+.|++|.+|+-.-.+...++..|..-|+|+.|+|||.+
T Consensus       126 erfg~~F~~D-SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~  204 (603)
T KOG0318|consen  126 ERFGHVFLWD-SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSR  204 (603)
T ss_pred             cceeEEEEec-CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCe
Confidence               4566777 5666778899999999999998654 6999999999999998878888888899999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-EEc---cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-VFN---GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-~~~---~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      +++++.||.|.+||-.++..+ .+.   +|.+.|..+.|. ++..|++++.|.+++|||+.+.+.+.++.......    
T Consensus       205 Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~----  280 (603)
T KOG0318|consen  205 FATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVE----  280 (603)
T ss_pred             EEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchh----
Confidence            999999999999999999888 454   788999887776 67799999999999999999999999998765421    


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                        .....+.|.  +..|++.+.+|+|.+++...+.++..+.+  |...|++|..+||+++|+++ +.||.|.-|+...+.
T Consensus       281 --dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~G--HnK~ITaLtv~~d~~~i~Sg-syDG~I~~W~~~~g~  353 (603)
T KOG0318|consen  281 --DQQVGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISG--HNKSITALTVSPDGKTIYSG-SYDGHINSWDSGSGT  353 (603)
T ss_pred             --ceEEEEEEe--CCeEEEEEcCcEEEEecccCCChhheecc--cccceeEEEEcCCCCEEEee-ccCceEEEEecCCcc
Confidence              224445564  55899999999999999999998888887  99999999999999999999 899999999987766


Q ss_pred             eeEE
Q psy17902        443 KNTV  446 (454)
Q Consensus       443 ~~~~  446 (454)
                      ...+
T Consensus       354 ~~~~  357 (603)
T KOG0318|consen  354 SDRL  357 (603)
T ss_pred             cccc
Confidence            5543

>KOG0645|consensus

Probab=100.00  E-value=1.4e-33  Score=226.87  Aligned_cols=254  Identities=21%  Similarity=0.302  Sum_probs=204.6

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ..+++.....|+..|.+++|+|.|++|++|+.|.++.||.-..+..    .......+|.+.|.|++|+++|.+||+++.
T Consensus        50 ~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~ef----ecv~~lEGHEnEVK~Vaws~sG~~LATCSR  125 (312)
T KOG0645|consen   50 WTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEF----ECVATLEGHENEVKCVAWSASGNYLATCSR  125 (312)
T ss_pred             EEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCce----eEEeeeeccccceeEEEEcCCCCEEEEeeC
Confidence            4444333335999999999999999999999999999997654332    223334489999999999999999999999


Q ss_pred             CCcEEEEeC----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CceeEEEeeccCCceeEEEeec
Q psy17902        211 NSNIKLWSS----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       211 dg~v~vw~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      |..|-||.+    ...+...+..|+..|..+.|+|...+|++++.|++|++|.-.   ...++.++.+|...|.+++|++
T Consensus       126 DKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~  205 (312)
T KOG0645|consen  126 DKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN  205 (312)
T ss_pred             CCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecC
Confidence            999999998    345677889999999999999999999999999999999866   3467889999999999999999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      .|..|++++.|++|+||-+.+.   ....|...+..+.+. ...|++++.|+.|++|.......-..+....  .....|
T Consensus       206 ~G~rl~s~sdD~tv~Iw~~~~~---~~~~~sr~~Y~v~W~-~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~--~~~~aH  279 (312)
T KOG0645|consen  206 IGSRLVSCSDDGTVSIWRLYTD---LSGMHSRALYDVPWD-NGVIASGGGDDAIRLFKESDSPDEPSWNLLA--KKEGAH  279 (312)
T ss_pred             CCceEEEecCCcceEeeeeccC---cchhcccceEeeeec-ccceEeccCCCEEEEEEecCCCCCchHHHHH--hhhccc
Confidence            9999999999999999987632   233456667766666 7789999999999999876431111111111  011235


Q ss_pred             CCcEEEEEEecC-CCEEEEecCCCcEEEEEcC
Q psy17902        364 PNWITSVACLHN-SDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       364 ~~~i~~~~~s~~-~~~l~~~~~dg~v~iwd~~  394 (454)
                      ...|++++|.|. .++|++|+.||.|++|.+.
T Consensus       280 e~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~  311 (312)
T KOG0645|consen  280 EVDVNSVQWNPKVSNRLASGGDDGIVNFWELE  311 (312)
T ss_pred             ccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence            566999999994 6799999999999999874

>KOG0310|consensus

Probab=100.00  E-value=1.1e-33  Score=245.18  Aligned_cols=277  Identities=18%  Similarity=0.275  Sum_probs=226.7

Q ss_pred             CCCCeEEEEEcCCCCE-EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKH-VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      ..+.|++++|+|...+ +|+++ .-.+.||+..+......+.      .....|+++.|..||++||+|+..|.|+|||+
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~s------rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~   97 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFS------RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDM   97 (487)
T ss_pred             ccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHH------hhccceeEEEeecCCeEEEccCCcCcEEEecc
Confidence            4467999999996543 33333 3579999988876665544      35568999999999999999999999999997


Q ss_pred             -CCccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCc
Q psy17902        220 -SLEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKS  296 (454)
Q Consensus       220 -~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~  296 (454)
                       +...+..+.+|+.+|..+.|+|. +..|++|+.|+.+++||+.+......+.+|+..|+|.+|+|.. .+++||+.||.
T Consensus        98 k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~  177 (487)
T KOG0310|consen   98 KSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK  177 (487)
T ss_pred             ccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence             33467788999999999999995 5677888999999999999988766889999999999999875 58999999999


Q ss_pred             EEEeeccCC-eEEEEccccCCeEEEEecCC-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        297 VRVWKIQEE-SQLVFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       297 i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      |++||++.. ..+.-..|..+|..+.+.++ ..++++ ....|++||+.++.........        |...|+|+.+..
T Consensus       178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA-gGn~vkVWDl~~G~qll~~~~~--------H~KtVTcL~l~s  248 (487)
T KOG0310|consen  178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA-GGNSVKVWDLTTGGQLLTSMFN--------HNKTVTCLRLAS  248 (487)
T ss_pred             EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc-CCCeEEEEEecCCceehhhhhc--------ccceEEEEEeec
Confidence            999999987 55566778888877777665 555554 4667999999866544433321        455599999999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      ++..|++|+-|+.|++||+.+.+.+..+.   ..++|.+++.+|+++.+++| ..+|.+.+=+
T Consensus       249 ~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~---~~~pvLsiavs~dd~t~viG-msnGlv~~rr  307 (487)
T KOG0310|consen  249 DSTRLLSGSLDRHVKVFDTTNYKVVHSWK---YPGPVLSIAVSPDDQTVVIG-MSNGLVSIRR  307 (487)
T ss_pred             CCceEeecccccceEEEEccceEEEEeee---cccceeeEEecCCCceEEEe-cccceeeeeh
Confidence            99999999999999999987777777766   67999999999999999999 6777776553

>KOG0288|consensus

Probab=100.00  E-value=5.2e-35  Score=248.07  Aligned_cols=289  Identities=21%  Similarity=0.314  Sum_probs=243.5

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ..+..  |.+.|..+.|-++...|++|+.|..|.+|+....+.    ....+..+..++|+.+.|.++++++++++.|+.
T Consensus       169 ~~ld~--h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~----~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~  242 (459)
T KOG0288|consen  169 FVLDA--HEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKS----ELISTLAGSLGNITSIDFDSDNKHVIAASNDKN  242 (459)
T ss_pred             hhhhc--cccccceeEEccCcchhhhcchhhhhhhhhcccchh----hhhhhhhccCCCcceeeecCCCceEEeecCCCc
Confidence            34455  999999999999989999999999999999887652    122233367788999999999999999999999


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      +++|++ +.....++.+|++.|+++.|......+++|+.|.+|++||+....+..++. ..+.+..|..+  ...+++|.
T Consensus       243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~--~~~~~SgH  319 (459)
T KOG0288|consen  243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS--ISDVISGH  319 (459)
T ss_pred             eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec--ceeeeecc
Confidence            999999 778889999999999999998877779999999999999999988887764 34556677765  56788999


Q ss_pred             CCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        293 TDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      .|+.|++||.++........-.+.++.+... ++..+++++.|.++.+.|+++....+.+.......     ..-.+.+.
T Consensus       320 ~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~-----asDwtrvv  394 (459)
T KOG0288|consen  320 FDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKC-----ASDWTRVV  394 (459)
T ss_pred             cccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccc-----ccccceeE
Confidence            9999999999999888555445567666654 67789999999999999999998888876543322     11278899


Q ss_pred             EecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      |||++.|+++||.||.|+||++.++++...+........|++++|+|.|.+|+++ +.+..+.+|.
T Consensus       395 fSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsa-dk~~~v~lW~  459 (459)
T KOG0288|consen  395 FSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSA-DKQKAVTLWT  459 (459)
T ss_pred             ECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcc-cCCcceEecC
Confidence            9999999999999999999999999998888875444479999999999999999 8999999983

>KOG0277|consensus

Probab=100.00  E-value=1.2e-33  Score=225.14  Aligned_cols=278  Identities=18%  Similarity=0.289  Sum_probs=225.2

Q ss_pred             EEEEEcCC-CCEEEEEe-------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEE
Q psy17902        146 TCIAVTSD-SKHVYSAC-------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKL  216 (454)
Q Consensus       146 ~~~~~s~~-~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~v  216 (454)
                      .++.|||- .++||++.       ..|.+.|.++.....+......    .-...+..++|+++ .+.+++++.||+++|
T Consensus        12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~----d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl   87 (311)
T KOG0277|consen   12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSY----DTEDGLFDVAWSENHENQVIAASGDGSLRL   87 (311)
T ss_pred             ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEee----ecccceeEeeecCCCcceEEEEecCceEEE
Confidence            78899993 34555443       3589999998644443332211    24557999999986 457888899999999


Q ss_pred             EeC--CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC-CCEEEEee
Q psy17902        217 WSS--SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK-NRVISSGG  292 (454)
Q Consensus       217 w~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~  292 (454)
                      ||+  ...++..++.|...|.++.|++ ....+++++.|++|++|+...++.+.++.+|...|....|+|. .+++++++
T Consensus        88 ~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S  167 (311)
T KOG0277|consen   88 FDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS  167 (311)
T ss_pred             eccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence            998  6678999999999999999998 4567888899999999999999999999999999999999986 58999999


Q ss_pred             CCCcEEEeeccCC-eEEEEccccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEE
Q psy17902        293 TDKSVRVWKIQEE-SQLVFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       293 ~dg~i~i~d~~~~-~~~~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      .|+++++||++.. +.+.+..|...+.++.|+  +.+.++||+.|+.|++||+++-+ ++..+.         +|.-.|.
T Consensus       168 gd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~---------gh~~AVR  238 (311)
T KOG0277|consen  168 GDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELN---------GHGLAVR  238 (311)
T ss_pred             CCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeec---------CCceEEE
Confidence            9999999999864 455788888888888776  56789999999999999998754 444442         3556699


Q ss_pred             EEEEecCC-CEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        369 SVACLHNS-DLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       369 ~~~~s~~~-~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .+.|||.. .+||+++.|-+++|||...+ ..+.+...  |...|..+.||+-....++.+|.|..+.+|+.
T Consensus       239 kvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~--HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  239 KVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDH--HTEFVCGLDWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             EEecCcchhhHhhhccccceEEecccccchhhhhhhhc--cceEEeccccccccCceeeecccccceeeecc
Confidence            99999965 48999999999999999865 44455553  88899999999865555555599999999984

>KOG0640|consensus

Probab=100.00  E-value=1.6e-33  Score=230.69  Aligned_cols=300  Identities=14%  Similarity=0.222  Sum_probs=238.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC------------CceecccCCcccCCCCCCceEEEEEe
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET------------RSKVCSSPFVKTDRKSYPPILALAVA  199 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~  199 (454)
                      ....+..  |++++.+.+|+|||.++|+|+.|..|+|.|++.            +......+...+...|...|+++.|+
T Consensus       104 Et~ylt~--HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH  181 (430)
T KOG0640|consen  104 ETKYLTS--HKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH  181 (430)
T ss_pred             ceEEEee--cccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence            5556667  999999999999999999999999999999872            11122223444556788999999999


Q ss_pred             CCCcEEEEecCCCcEEEEeCCCc---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccC
Q psy17902        200 NNNELVASGDNNSNIKLWSSSLE---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQ  273 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~  273 (454)
                      |....|++|+.|++|++||+...   .-........+|.++.|+|.|.+|++|..-.++++||+++.++...-   ..|.
T Consensus       182 Pre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht  261 (430)
T KOG0640|consen  182 PRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHT  261 (430)
T ss_pred             chhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccc
Confidence            99999999999999999999332   22223345678999999999999999999999999999998876544   3689


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE--EccccC-CeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV--FNGHSR-GIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~-~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      +.|+++.+++.+++.++++.||.|++||--+++++.  -..|.+ .|..+.| .++.++++.+.|..+++|.+.++.++.
T Consensus       262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~  341 (430)
T KOG0640|consen  262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLK  341 (430)
T ss_pred             cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEE
Confidence            999999999999999999999999999998888882  234443 3444444 478899999999999999999999999


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      .+.......    ....-+...|+....|++.-. ..+.+.-||.++...+..+. ..|++.+..+.-||.+..++++ +
T Consensus       342 ~YtGAg~tg----rq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-lgHn~a~R~i~HSP~~p~FmTc-s  415 (430)
T KOG0640|consen  342 EYTGAGTTG----RQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-LGHNGAVRWIVHSPVEPAFMTC-S  415 (430)
T ss_pred             EEecCCccc----chhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc-cCCCCCceEEEeCCCCCceeee-c
Confidence            887543211    112234456766666666544 35779999999886555443 3599999999999999999988 8


Q ss_pred             CCCceeeeeee
Q psy17902        429 TEHRFGRWKTI  439 (454)
Q Consensus       429 ~d~~i~~W~~~  439 (454)
                      +|.++++|...
T Consensus       416 dD~raRFWyrr  426 (430)
T KOG0640|consen  416 DDFRARFWYRR  426 (430)
T ss_pred             ccceeeeeeec
Confidence            99999999764

>KOG0295|consensus

Probab=100.00  E-value=9.2e-34  Score=236.80  Aligned_cols=244  Identities=20%  Similarity=0.359  Sum_probs=221.1

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      .+.++|  |.+.|..++|+..|++|++++.|=.+.+||.++. .++...      .+|...|.+++|-|.|.+|++++.|
T Consensus       143 e~~LrG--Ht~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~------~gh~h~vS~V~f~P~gd~ilS~srD  214 (406)
T KOG0295|consen  143 ERSLRG--HTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSL------IGHEHGVSSVFFLPLGDHILSCSRD  214 (406)
T ss_pred             hhhhhc--cccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHh------cCcccceeeEEEEecCCeeeecccc
Confidence            567889  9999999999999999999999988999999873 222222      2788899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC------
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK------  284 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------  284 (454)
                      .+|+.|++ ++.++.++.+|..-|..+..+.||.++++++.|.+|++|-+.++.+...+..|..+|.|++|.|.      
T Consensus       215 ~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i  294 (406)
T KOG0295|consen  215 NTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSI  294 (406)
T ss_pred             cceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcch
Confidence            99999999 88999999999999999999999999999999999999999999998899999999999999762      


Q ss_pred             ---------CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        285 ---------NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       285 ---------~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                               +.++.+++.|++|++||+.++.++ .+.+|...|..+.+++ |.+|+++..|+++++||+++.++..++..
T Consensus       295 ~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~a  374 (406)
T KOG0295|consen  295 SEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEA  374 (406)
T ss_pred             hhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCC
Confidence                     258999999999999999999988 8999999998877765 67888999999999999999999999875


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      +         +..++++.|+.+..++++|+-|.++++|..
T Consensus       375 h---------~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc  405 (406)
T KOG0295|consen  375 H---------EHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  405 (406)
T ss_pred             C---------cceeEEEecCCCCceEEeccccceeeeeec
Confidence            3         344999999999999999999999999964

>KOG0281|consensus

Probab=100.00  E-value=7e-35  Score=242.12  Aligned_cols=248  Identities=20%  Similarity=0.414  Sum_probs=209.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....|.|  |++.|.|+.|..  +.|++|+.|.+|++||.++++.+.++-      +|...|..+.|+.  .++++++.|
T Consensus       229 c~~~L~G--HtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~tli------hHceaVLhlrf~n--g~mvtcSkD  296 (499)
T KOG0281|consen  229 CLKILTG--HTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLNTLI------HHCEAVLHLRFSN--GYMVTCSKD  296 (499)
T ss_pred             HHHhhhc--CCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhhHHh------hhcceeEEEEEeC--CEEEEecCC
Confidence            4566788  999999999965  699999999999999999999888776      6999999999974  489999999


Q ss_pred             CcEEEEeCCC----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 SNIKLWSSSL----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 g~v~vw~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      .++.+||+..    .....+.+|...|+.+.|+  .+++++++.|.+|++|++.++.+++++.+|...|.|+.+  .+++
T Consensus       297 rsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rl  372 (499)
T KOG0281|consen  297 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRL  372 (499)
T ss_pred             ceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeE
Confidence            9999999922    2345678999999999996  569999999999999999999999999999999999988  5899


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      +++|+.|.+|++||+..+.++ .+.+|..-+.++.|. +..+++|+.||+|++||+..+.........-.......|.+.
T Consensus       373 vVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd-~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgR  451 (499)
T KOG0281|consen  373 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD-NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGR  451 (499)
T ss_pred             EEecCCCceEEEEeccccHHHHHHhchHHhhhheeec-CceeeeccccceEEEEecccccCCcccccchHHHhhhhccce
Confidence            999999999999999999998 889999999999885 567999999999999999776433222111111122246667


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      |..+.|  |...|++++.|.+|-|||+.++.+
T Consensus       452 VFrLQF--D~fqIvsssHddtILiWdFl~~~~  481 (499)
T KOG0281|consen  452 VFRLQF--DEFQIISSSHDDTILIWDFLNGPP  481 (499)
T ss_pred             eEEEee--cceEEEeccCCCeEEEEEcCCCCc
Confidence            999998  555899999999999999987743

>KOG0306|consensus

Probab=100.00  E-value=8.2e-33  Score=251.25  Aligned_cols=284  Identities=17%  Similarity=0.285  Sum_probs=248.0

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ..+.|  |+..|.++++|.+...+++|+ .+.|+||+..+.+++.++..        ..+.+..|.|.++++++|..+|.
T Consensus       367 i~~~G--HR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~--------~y~l~~~Fvpgd~~Iv~G~k~Ge  435 (888)
T KOG0306|consen  367 IEIGG--HRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC--------GYILASKFVPGDRYIVLGTKNGE  435 (888)
T ss_pred             eeecc--chhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc--------ccEEEEEecCCCceEEEeccCCc
Confidence            44556  999999999999877777765 57899999999999988763        27899999999999999999999


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----cee--EEEe-----eccCCceeEEE
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-----RAY--VETL-----FGHQSAITSLD  280 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~--~~~~-----~~~~~~v~~~~  280 (454)
                      +.+||+ ....+.+...|.+.|++++.+||+..+++||.|.+|++||..-     +..  +..+     ..-...|.|+.
T Consensus       436 l~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~  515 (888)
T KOG0306|consen  436 LQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVS  515 (888)
T ss_pred             eEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEE
Confidence            999999 7778888899999999999999999999999999999999642     111  1111     12457799999


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      ++||+++|+++-.|.+|+||-+.+-+.. .+.+|.-++.|+..+ ++..++|||.|..|++|-+.-|.+-..+-.     
T Consensus       516 ~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-----  590 (888)
T KOG0306|consen  516 VSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-----  590 (888)
T ss_pred             EcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-----
Confidence            9999999999999999999999997766 889999999888865 567899999999999999998888777653     


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                          |...|+++.|.|...++++++.|+.|+-||-.....++.+.+  |...|++++.+|+|.+++++ +-|..|++|..
T Consensus       591 ----HdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~--H~~ev~cLav~~~G~~vvs~-shD~sIRlwE~  663 (888)
T KOG0306|consen  591 ----HDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDG--HHSEVWCLAVSPNGSFVVSS-SHDKSIRLWER  663 (888)
T ss_pred             ----ccCceeEEEEcccceeEEEecCcceEEeechhhhhhheeecc--chheeeeeEEcCCCCeEEec-cCCceeEeeec
Confidence                555699999999999999999999999999988888988887  88999999999999999999 89999999976


Q ss_pred             eC
Q psy17902        439 IK  440 (454)
Q Consensus       439 ~~  440 (454)
                      ..
T Consensus       664 td  665 (888)
T KOG0306|consen  664 TD  665 (888)
T ss_pred             cC
Confidence            43

>KOG0266|consensus

Probab=100.00  E-value=6e-33  Score=260.71  Aligned_cols=247  Identities=21%  Similarity=0.437  Sum_probs=215.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEc-CCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLL-ETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ..+.+.+  |...|++++|+|++.++++++.|++|+|||+ ..+..+..+.      +|...|++++|+|+++++++|+.
T Consensus       195 ~~~~l~~--h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~------gH~~~v~~~~f~p~g~~i~Sgs~  266 (456)
T KOG0266|consen  195 LLRELSG--HTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLK------GHSTYVTSVAFSPDGNLLVSGSD  266 (456)
T ss_pred             hhccccc--cccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEec------CCCCceEEEEecCCCCEEEEecC
Confidence            4455577  9999999999999999999999999999999 4446666665      79999999999999999999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCc--eeEEEeecCC
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSA--ITSLDILAKN  285 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~--v~~~~~~~~~  285 (454)
                      |++|+|||+ .+.++..+.+|.+.|++++|++++++|++++.|+.|++||+.++.  ++..+.++...  ++++.|+|++
T Consensus       267 D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~  346 (456)
T KOG0266|consen  267 DGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNG  346 (456)
T ss_pred             CCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCC
Confidence            999999999 679999999999999999999999999999999999999999998  56677666655  9999999999


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEE----ecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTR----RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      .+|++++.|+.+++||+..+... .+.+|...+.+..    +..+..+++|+.|+.|++|++.++..+..+..+.     
T Consensus       347 ~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-----  421 (456)
T KOG0266|consen  347 KYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS-----  421 (456)
T ss_pred             cEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC-----
Confidence            99999999999999999988776 6777776543332    3467889999999999999999988777776531     


Q ss_pred             CCCCCcEEEEEEecCCCEEEEec--CCCcEEEEEcC
Q psy17902        361 SSEPNWITSVACLHNSDLVASGS--YDGCVKLWKIT  394 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~--~dg~v~iwd~~  394 (454)
                         ...+..+.++|..+++++++  .|+.+++|...
T Consensus       422 ---~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~  454 (456)
T KOG0266|consen  422 ---KAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD  454 (456)
T ss_pred             ---CCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence               34489999999999999998  68899999754

>KOG0276|consensus

Probab=100.00  E-value=6.6e-33  Score=246.93  Aligned_cols=241  Identities=22%  Similarity=0.332  Sum_probs=216.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      .++.|.-  ..-+|.++.|-+..+++++|+.|..|+||+..++..+..+.      .|..-|.+++.+|.-.++++++.|
T Consensus        47 mVksfeV--~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~Fe------AH~DyIR~iavHPt~P~vLtsSDD  118 (794)
T KOG0276|consen   47 MVKSFEV--SEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFE------AHSDYIRSIAVHPTLPYVLTSSDD  118 (794)
T ss_pred             eeeeeee--cccchhhheeeeccceEEEecCCceEEEEecccceeeEEee------ccccceeeeeecCCCCeEEecCCc
Confidence            3455555  67789999999999999999999999999999999998887      699999999999999999999999


Q ss_pred             CcEEEEeC--CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC--C
Q psy17902        212 SNIKLWSS--SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN--R  286 (454)
Q Consensus       212 g~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~  286 (454)
                      -.|++||.  ...+.+++.+|...|.+++|+| |.+.+++++.|++|+||.+.+..+..++.+|...|+|+.|.+.|  .
T Consensus       119 m~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkp  198 (794)
T KOG0276|consen  119 MTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKP  198 (794)
T ss_pred             cEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcc
Confidence            99999999  5577889999999999999999 56899999999999999999999999999999999999998755  6


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCC-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +|++|+.|.+|+|||.++..++ ++.+|...++.+++++. ..+++|+.||+++||...+-+...++......       
T Consensus       199 ylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleR-------  271 (794)
T KOG0276|consen  199 YLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLER-------  271 (794)
T ss_pred             eEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCce-------
Confidence            9999999999999999999988 88999999999998875 68899999999999999888777776654433       


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEE
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVK  389 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~  389 (454)
                        ++|++-.+.++.+++|...|.|.
T Consensus       272 --vW~I~~~k~~~~i~vG~Deg~i~  294 (794)
T KOG0276|consen  272 --VWCIAAHKGDGKIAVGFDEGSVT  294 (794)
T ss_pred             --EEEEeecCCCCeEEEeccCCcEE
Confidence              99999999888888888877654

>KOG1446|consensus

Probab=100.00  E-value=1.7e-31  Score=220.02  Aligned_cols=286  Identities=14%  Similarity=0.212  Sum_probs=235.9

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC--C
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN--N  211 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d  211 (454)
                      +.|+.  ..+.|+++.|+++|.+|++++.|.+++|||..++.....+.      .+...+..+.|....+.++.++.  |
T Consensus         8 k~f~~--~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~------skkyG~~~~~Fth~~~~~i~sStk~d   79 (311)
T KOG1446|consen    8 KVFRE--TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTIN------SKKYGVDLACFTHHSNTVIHSSTKED   79 (311)
T ss_pred             ccccc--CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEee------cccccccEEEEecCCceEEEccCCCC
Confidence            34444  67789999999999999999999999999999999988877      35567888888777666776666  8


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      .+|+..++ +.+.++.|.+|...|++|+.+|-+..+++++.|++|++||++..++...+.....+  .++|.|.|-++|+
T Consensus        80 ~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~  157 (311)
T KOG1446|consen   80 DTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFAL  157 (311)
T ss_pred             CceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEE
Confidence            89999999 88999999999999999999999999999999999999999988887776544444  4889999999999


Q ss_pred             eeCCCcEEEeeccCCeE---EEEc---cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        291 GGTDKSVRVWKIQEESQ---LVFN---GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~---~~~~---~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      +.....|++||++.-..   ..+.   ......+.+.++ +|..++.++..+.+++.|.-+|....++........    
T Consensus       158 ~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~----  233 (311)
T KOG1446|consen  158 ANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN----  233 (311)
T ss_pred             ecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC----
Confidence            98888999999986421   1222   223444555554 678889999999999999999998888776543221    


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                        .....+|+|+++++++|+.||+|.+|++.++..+..+.+. +.+++.++.|+|.-.+++++   +..+.+|-..
T Consensus       234 --~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~-~~~~~~~~~fnP~~~mf~sa---~s~l~fw~p~  303 (311)
T KOG1446|consen  234 --LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP-NGGPVSCVRFNPRYAMFVSA---SSNLVFWLPD  303 (311)
T ss_pred             --cceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC-CCCCccccccCCceeeeeec---CceEEEEecc
Confidence              1367889999999999999999999999999999988874 78999999999987777766   6678788654

>KOG0300|consensus

Probab=100.00  E-value=5.8e-33  Score=228.20  Aligned_cols=292  Identities=20%  Similarity=0.350  Sum_probs=251.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.|.|  |.+.|..++.....+.+.+++.|.+.+||.++++.++..+.      +|.+.|+++.|++.+.++++++.|
T Consensus       140 lvre~~G--HkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~------GH~GSVNsikfh~s~~L~lTaSGD  211 (481)
T KOG0300|consen  140 LVRELEG--HKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYT------GHTGSVNSIKFHNSGLLLLTASGD  211 (481)
T ss_pred             ehhhhcc--cccceeeehhhcCCcceeecccccceeEEeeccccceeeec------ccccceeeEEeccccceEEEccCC
Confidence            5667889  99999999998888899999999999999999999988877      799999999999999999999999


Q ss_pred             CcEEEEeC-------C----------------------------------CccEEeecccCCCeEEEEEcCCCCEEEEEe
Q psy17902        212 SNIKLWSS-------S----------------------------------LEHLHTFTGHKAPITGLAISFECDTLYSSS  250 (454)
Q Consensus       212 g~v~vw~~-------~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  250 (454)
                      ++..||..       .                                  ..++..+.+|.+.|.+..|...|+.+++++
T Consensus       212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaS  291 (481)
T KOG0300|consen  212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTAS  291 (481)
T ss_pred             cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeee
Confidence            99999961       0                                  012456788999999999999999999999


Q ss_pred             CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEE
Q psy17902        251 NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQF  328 (454)
Q Consensus       251 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l  328 (454)
                      .|.+..+||++++..+..+.+|....+.++-+|..+++++++.|.+.++||++..-..  .|.+|...++.+.|..+..+
T Consensus       292 WDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~v  371 (481)
T KOG0300|consen  292 WDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRV  371 (481)
T ss_pred             ccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCce
Confidence            9999999999999999999999999999999999999999999999999999954333  89999999999999999999


Q ss_pred             EEEeCCCCEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe--ccC
Q psy17902        329 ITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL--QDI  405 (454)
Q Consensus       329 ~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~--~~~  405 (454)
                      ++|+.|.+|++||+++. .++.++...          .+++.++.+..+.+|+.--.+..|++||++..+..+.-  ...
T Consensus       372 VSgSDDrTvKvWdLrNMRsplATIRtd----------S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRq  441 (481)
T KOG0300|consen  372 VSGSDDRTVKVWDLRNMRSPLATIRTD----------SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQ  441 (481)
T ss_pred             eecCCCceEEEeeeccccCcceeeecC----------CccceeEeecCCceEEeccCCceEEEEecCCCccccCCccccc
Confidence            99999999999999875 466666542          33889999999999999999999999999866443322  122


Q ss_pred             CCceeeeEEEEcCCCC--EEEEEecCCCceeeeeeeCCC
Q psy17902        406 PLSGVINSLVFTSDHK--HLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       406 ~~~~~v~~l~~s~d~~--~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .|...|+|++|..+..  -|+++ |.|..+.-|+.....
T Consensus       442 gHrRMV~c~AW~eehp~cnLftc-GFDR~v~gW~in~p~  479 (481)
T KOG0300|consen  442 GHRRMVTCCAWLEEHPACNLFTC-GFDRMVAGWKINTPT  479 (481)
T ss_pred             ccceeeeeeeccccCcccccccc-cccceeeeeEecccC
Confidence            3778899999986543  35666 899999999986543

>KOG0643|consensus

Probab=100.00  E-value=1.5e-32  Score=220.49  Aligned_cols=285  Identities=19%  Similarity=0.242  Sum_probs=238.9

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .+.|  |..+++.+.|+.+|.+|++++.|.+..+|-..+++.+.++.      +|.+.|.|++.+.+.+.|++|+.|.++
T Consensus         5 ~l~G--HERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~------GHtGavW~~Did~~s~~liTGSAD~t~   76 (327)
T KOG0643|consen    5 LLQG--HERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYD------GHTGAVWCCDIDWDSKHLITGSADQTA   76 (327)
T ss_pred             cccc--CccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeec------CCCceEEEEEecCCcceeeecccccee
Confidence            4677  99999999999999999999999999999988899888887      899999999999999999999999999


Q ss_pred             EEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCC-------CceeEEEeeccCCceeEEEe
Q psy17902        215 KLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSN-----DRSIKVWNIE-------DRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       215 ~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~-------~~~~~~~~~~~~~~v~~~~~  281 (454)
                      ++||+ +++++..++ ...+|..+.|+++|++++....     .+.|.++|++       ...+...+..+.+.++.+.|
T Consensus        77 kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W  155 (327)
T KOG0643|consen   77 KLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW  155 (327)
T ss_pred             EEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence            99999 777777776 5679999999999998887754     4679999998       44567777788899999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      .|-+.+|++|..||.|.+||++++...  .-..|...|+.+.++ +..+|++++.|.+-++||+.+...+.++..     
T Consensus       156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t-----  230 (327)
T KOG0643|consen  156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT-----  230 (327)
T ss_pred             cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee-----
Confidence            999999999999999999999998776  456788888877766 467899999999999999999999988874     


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCc--EE------------EEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGC--VK------------LWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--v~------------iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                           ..++++.+++|..+.++.|+...-  |.            +|++-..+.+..+++  |-++|++++|+|+|+..+
T Consensus       231 -----e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkG--HFGPINsvAfhPdGksYs  303 (327)
T KOG0643|consen  231 -----ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKG--HFGPINSVAFHPDGKSYS  303 (327)
T ss_pred             -----cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccc--cccCcceeEECCCCcccc
Confidence                 334999999998877666654322  22            222222233445555  889999999999999988


Q ss_pred             EEecCCCceeeeeeeCC
Q psy17902        425 AGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       425 ~~~~~d~~i~~W~~~~~  441 (454)
                      +| |.||.|++--+.+.
T Consensus       304 SG-GEDG~VR~h~Fd~~  319 (327)
T KOG0643|consen  304 SG-GEDGYVRLHHFDSN  319 (327)
T ss_pred             cC-CCCceEEEEEeccc
Confidence            88 99999998765443

>KOG0305|consensus

Probab=100.00  E-value=2.6e-32  Score=245.72  Aligned_cols=275  Identities=17%  Similarity=0.290  Sum_probs=235.9

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccE
Q psy17902        146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHL  224 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~  224 (454)
                      .-+.|+ ..+.||+|.. ..|++|+..++.......+      +...|+++.|+++|.+|++|..+|.|.|||. +.+.+
T Consensus       181 nlldWs-s~n~laValg-~~vylW~~~s~~v~~l~~~------~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~  252 (484)
T KOG0305|consen  181 NLLDWS-SANVLAVALG-QSVYLWSASSGSVTELCSF------GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT  252 (484)
T ss_pred             hHhhcc-cCCeEEEEec-ceEEEEecCCCceEEeEec------CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc
Confidence            345677 4567777764 5899999998886555443      3678999999999999999999999999999 77778


Q ss_pred             Eeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        225 HTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       225 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                      ..+.. |...|-+++|+  +..+.+|+.++.|..+|++..+.... +.+|...|..+.|+++++++++|+.|+.+.|||.
T Consensus       253 ~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~  330 (484)
T KOG0305|consen  253 RTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG  330 (484)
T ss_pred             ccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence            88888 99999999998  67899999999999999998776555 7889999999999999999999999999999999


Q ss_pred             cCCeEE-EEccccCCeEEEEecC--CCEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        303 QEESQL-VFNGHSRGIDMTRRVN--DQQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       303 ~~~~~~-~~~~~~~~i~~~~~~~--~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                      ....+. .+..|...|..+.|++  .+.|++|+  .|+.|++||..++..+..+....          .|.+|.|++..+
T Consensus       331 ~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgs----------QVcsL~Wsk~~k  400 (484)
T KOG0305|consen  331 LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGS----------QVCSLIWSKKYK  400 (484)
T ss_pred             CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCC----------ceeeEEEcCCCC
Confidence            665554 8899999999998886  67888866  79999999999999888876433          399999999887


Q ss_pred             EEEE--ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        378 LVAS--GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       378 ~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      -|++  |..++.|.||++.+.+.+..+.+  |...|..+++||||..++++ +.|.++++|++....+
T Consensus       401 Ei~sthG~s~n~i~lw~~ps~~~~~~l~g--H~~RVl~la~SPdg~~i~t~-a~DETlrfw~~f~~~~  465 (484)
T KOG0305|consen  401 ELLSTHGYSENQITLWKYPSMKLVAELLG--HTSRVLYLALSPDGETIVTG-AADETLRFWNLFDERP  465 (484)
T ss_pred             EEEEecCCCCCcEEEEeccccceeeeecC--CcceeEEEEECCCCCEEEEe-cccCcEEeccccCCCC
Confidence            5555  34577899999999888888887  89999999999999999999 8899999999876433

>KOG1036|consensus

Probab=100.00  E-value=1.2e-31  Score=219.77  Aligned_cols=296  Identities=16%  Similarity=0.238  Sum_probs=230.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -...|++|.|+|.++.|+++++||.+++|+.........+.       |..++.+++|.++ ..+++|+.||.|+.+|++
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-------~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln   83 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-------HGAPLLDCAFADE-STIVTGGLDGQVRRYDLN   83 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-------cCCceeeeeccCC-ceEEEeccCceEEEEEec
Confidence            46779999999999999999999999999999875554443       7889999999874 568999999999999998


Q ss_pred             CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEe
Q psy17902        221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW  300 (454)
Q Consensus       221 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~  300 (454)
                      +.....+-.|..+|.||.+++....+++|+.|++|++||.+....+..+. ....|.++..  .++.|++|+.+..|.+|
T Consensus        84 ~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-~~kkVy~~~v--~g~~LvVg~~~r~v~iy  160 (323)
T KOG1036|consen   84 TGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-QGKKVYCMDV--SGNRLVVGTSDRKVLIY  160 (323)
T ss_pred             CCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc-cCceEEEEec--cCCEEEEeecCceEEEE
Confidence            88888888999999999999988899999999999999999866665554 4457888876  47889999999999999


Q ss_pred             eccCCeEEE---EccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCC----ccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        301 KIQEESQLV---FNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKK----VPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       301 d~~~~~~~~---~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      |+++.....   -......+.++. +|++.-+++++-+|.|.+=.+...    .....+..+...........+|++|+|
T Consensus       161 DLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F  240 (323)
T KOG1036|consen  161 DLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF  240 (323)
T ss_pred             EcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence            999866542   222233445554 455677899999999988666554    333344444333333334456999999


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI  451 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~  451 (454)
                      +|-...||||+.||.|.+||+.+.+.+..+..  ....|.+++|+.||..||++++.-..---  ..+...+++++..+
T Consensus       241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~--~~~SI~slsfs~dG~~LAia~sy~ye~~~--~~~~~~~~i~I~~l  315 (323)
T KOG1036|consen  241 HPIHGTFATGGSDGIVNIWDLFNRKRLKQLAK--YETSISSLSFSMDGSLLAIASSYQYERAD--TPTHERNAIFIRDL  315 (323)
T ss_pred             ccccceEEecCCCceEEEccCcchhhhhhccC--CCCceEEEEeccCCCeEEEEechhhhcCC--CCCCCCCceEEEec
Confidence            99988999999999999999999888888876  46779999999999999999654221111  11334455666544

>KOG0292|consensus

Probab=100.00  E-value=4.3e-32  Score=250.71  Aligned_cols=245  Identities=18%  Similarity=0.332  Sum_probs=215.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ++..|..  |.++|..++|+|++.++++|+.|-.|++|+..+..++.++.      +|..-|..+.|++.-.++++++.|
T Consensus        43 li~rFde--HdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~------GHlDYVRt~~FHheyPWIlSASDD  114 (1202)
T KOG0292|consen   43 LIDRFDE--HDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLL------GHLDYVRTVFFHHEYPWILSASDD  114 (1202)
T ss_pred             HHhhhhc--cCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhc------cccceeEEeeccCCCceEEEccCC
Confidence            3456677  99999999999999999999999999999999999888877      799999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---------------------------
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---------------------------  263 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---------------------------  263 (454)
                      -+|+||++ +.+++..+.+|...|.|..|+|....++++|.|.+|+|||+..-                           
T Consensus       115 QTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~  194 (1202)
T KOG0292|consen  115 QTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQT  194 (1202)
T ss_pred             CeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCc
Confidence            99999999 88999999999999999999999999999999999999998521                           


Q ss_pred             e--eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecC-CCEEEEEeCCCCE
Q psy17902        264 A--YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVN-DQQFITCGEDGTL  337 (454)
Q Consensus       264 ~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i  337 (454)
                      .  ....+.||...|+-++|+|.-.+|++|+.|..|++|.+...+.-   +..+|.+.++++.|++ .+.+++.+.|++|
T Consensus       195 DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksi  274 (1202)
T KOG0292|consen  195 DAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSI  274 (1202)
T ss_pred             CeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccE
Confidence            0  12345789999999999999999999999999999998865544   7889999998887765 6788999999999


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      +|||+.....++++...+..         .+.++-+|..+++|+|...| +.+|.+.
T Consensus       275 rVwDm~kRt~v~tfrrendR---------FW~laahP~lNLfAAgHDsG-m~VFkle  321 (1202)
T KOG0292|consen  275 RVWDMTKRTSVQTFRRENDR---------FWILAAHPELNLFAAGHDSG-MIVFKLE  321 (1202)
T ss_pred             EEEecccccceeeeeccCCe---------EEEEEecCCcceeeeecCCc-eEEEEEc
Confidence            99999999999998765433         88999999998888776554 6666655

>PTZ00421 coronin; Provisional

Probab=100.00  E-value=2.4e-31  Score=248.66  Aligned_cols=271  Identities=16%  Similarity=0.221  Sum_probs=209.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-------CcccCCCCCCceEEEEEeC-CCcEEEEecCCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-------FVKTDRKSYPPILALAVAN-NNELVASGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg  212 (454)
                      |-..|....+++++..+++++.+.....|+...+..+....       ......+|.+.|.+++|+| ++++|++|+.|+
T Consensus        19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg   98 (493)
T PTZ00421         19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG   98 (493)
T ss_pred             ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence            44456666777776777777777777788765543221110       0111247899999999999 889999999999


Q ss_pred             cEEEEeCCC--------ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        213 NIKLWSSSL--------EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       213 ~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      +|++|++..        ..+..+.+|...|.+++|+|++ ++|++|+.|++|+|||+.+++.+..+.+|...|.+++|+|
T Consensus        99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~sp  178 (493)
T PTZ00421         99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNL  178 (493)
T ss_pred             EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEEC
Confidence            999999832        3467889999999999999975 6999999999999999999999889999999999999999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCe--EEEEecCCCEEEEEe----CCCCEEEEecCCCc-cceeeeccc
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGI--DMTRRVNDQQFITCG----EDGTLSLWSILKKV-PTHTIPVAH  355 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i--~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~-~~~~~~~~~  355 (454)
                      ++.+|++++.|+.|++||++++..+ .+.+|....  .+++.++++.+++++    .|+.|++||+++.. ++...... 
T Consensus       179 dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d-  257 (493)
T PTZ00421        179 DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLD-  257 (493)
T ss_pred             CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccC-
Confidence            9999999999999999999998876 566676543  455556667777654    47899999998754 33322211 


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                             ....+....|++++++|++|+ .||.|++||+.++..+..... ....++..++|.|.-
T Consensus       258 -------~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~-~s~~~~~g~~~~pk~  315 (493)
T PTZ00421        258 -------QSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSY-SSVEPHKGLCMMPKW  315 (493)
T ss_pred             -------CCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeec-cCCCCCcceEecccc
Confidence                   122366778999999988887 599999999999877665443 355678899999853

>KOG0268|consensus

Probab=100.00  E-value=1.1e-33  Score=236.33  Aligned_cols=289  Identities=17%  Similarity=0.284  Sum_probs=233.5

Q ss_pred             EeEeccCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      +..|.|  |.+.|.|++=+|.. ..+++|+.||.|+|||+....+...+.      .|.+.|..|++..  ..+++++.|
T Consensus        59 v~~L~g--HrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~------AH~G~V~Gi~v~~--~~~~tvgdD  128 (433)
T KOG0268|consen   59 VGSLDG--HRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFK------AHEGLVRGICVTQ--TSFFTVGDD  128 (433)
T ss_pred             hhhccc--cccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheee------cccCceeeEEecc--cceEEecCC
Confidence            445678  99999999999986 789999999999999999988887777      6999999999987  578888999


Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEE
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISS  290 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~  290 (454)
                      .+|+.|.+.+.++.++.+ ...+..|.-+..+..++|+|.  .|.|||..-..++..+.--...|.++.|+|.. .+|++
T Consensus       129 KtvK~wk~~~~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas  205 (433)
T KOG0268|consen  129 KTVKQWKIDGPPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILAS  205 (433)
T ss_pred             cceeeeeccCCcceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheee
Confidence            999999998877777764 456777777777788888875  59999999888888887777889999999986 67788


Q ss_pred             eeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEE
Q psy17902        291 GGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      ++.|+.|.+||++...++.-.......+.++| |..-.|++++.|..++.||++... ++....         .|...|.
T Consensus       206 ~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~---------dhvsAV~  276 (433)
T KOG0268|consen  206 CASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHK---------DHVSAVM  276 (433)
T ss_pred             eccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchhhc---------ccceeEE
Confidence            88999999999999888732222222233444 445568889999999999998643 232222         3566699


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeE
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNT  445 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~  445 (454)
                      ++.|||.|+-|++||.|.+|+||.++.+..-..+.. .-...|.++.||.|.+|+++| ++|+.|++|.-....+.+
T Consensus       277 dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYht-kRMq~V~~Vk~S~Dskyi~SG-Sdd~nvRlWka~Aseklg  351 (433)
T KOG0268|consen  277 DVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT-KRMQHVFCVKYSMDSKYIISG-SDDGNVRLWKAKASEKLG  351 (433)
T ss_pred             EeccCCCcchhccccccceEEEeecCCCcchhhhhH-hhhheeeEEEEeccccEEEec-CCCcceeeeecchhhhcC
Confidence            999999999999999999999999988755444433 245679999999999999999 899999999876555443

>KOG0274|consensus

Probab=100.00  E-value=6.7e-32  Score=252.50  Aligned_cols=276  Identities=20%  Similarity=0.402  Sum_probs=242.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc-cCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS-SPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |...|.|..|+  ..++++++.+++|++|+..++..+.. +.      +|.+.|.++++..-+.+|++|+.|.++++||.
T Consensus       207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~------GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~  278 (537)
T KOG0274|consen  207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLV------GHFGGVWGLAFPSGGDKLVSGSTDKTERVWDC  278 (537)
T ss_pred             Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeecc------CCCCCceeEEEecCCCEEEEEecCCcEEeEec
Confidence            56778999998  47899999999999999999887776 44      89999999999887889999999999999999


Q ss_pred             -CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        220 -SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       220 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                       ++.+...+.+|...|.++...  ...+++|+.|.+|++|++.++.++..+.+|..+|+++.++  +.++++|+.|++|+
T Consensus       279 ~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~  354 (537)
T KOG0274|consen  279 STGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVK  354 (537)
T ss_pred             CCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEE
Confidence             899999999999999998876  4578889999999999999999999998999999999997  88999999999999


Q ss_pred             EeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        299 VWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       299 i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      +||+.+++++ .+.+|...|.++.+.....+++|+.|++|++||+.+. +++.++..+.         ..+..+.+  .+
T Consensus       355 VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~---------~~v~~l~~--~~  423 (537)
T KOG0274|consen  355 VWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHT---------SLVSSLLL--RD  423 (537)
T ss_pred             EEEhhhceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCc---------cccccccc--cc
Confidence            9999999998 8899999999986655489999999999999999999 8888876533         33555554  56


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ++|++++.||+|++||...+.++..+... +.+.|+.+++.  ...++++ +.++.+.+|+...+..
T Consensus       424 ~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~v~~l~~~--~~~il~s-~~~~~~~l~dl~~~~~  486 (537)
T KOG0274|consen  424 NFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGGVSALALG--KEEILCS-SDDGSVKLWDLRSGTL  486 (537)
T ss_pred             ceeEeccccccEEEeecccCceeeeeccC-CcccEEEeecC--cceEEEE-ecCCeeEEEecccCch
Confidence            79999999999999999999999999874 56788888887  3455555 8999999999876643

>KOG1407|consensus

Probab=100.00  E-value=1.4e-31  Score=214.22  Aligned_cols=276  Identities=14%  Similarity=0.162  Sum_probs=235.8

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCC
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNS  212 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg  212 (454)
                      +.+++  |.+.|.+++|+.+|..|++|+.|+++.+|+++.......    ....+|...|-.++|+| ...++++++.|.
T Consensus        14 r~~~~--~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~----~~~~gh~~svdql~w~~~~~d~~atas~dk   87 (313)
T KOG1407|consen   14 RELQG--HVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKE----LVYRGHTDSVDQLCWDPKHPDLFATASGDK   87 (313)
T ss_pred             HHhhh--hhhcceEEEEcccCceeeecccCCceEEEEecchhhhhh----hcccCCCcchhhheeCCCCCcceEEecCCc
Confidence            45666  999999999999999999999999999999987643322    23357888999999987 467899999999


Q ss_pred             cEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      +|++||+ .++++.......+.|. +.|+|+|.++++++.|..|.+.|.++.+.+... .....+.-++|+.++++++..
T Consensus        88 ~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~-~~~~e~ne~~w~~~nd~Fflt  165 (313)
T KOG1407|consen   88 TIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE-QFKFEVNEISWNNSNDLFFLT  165 (313)
T ss_pred             eEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehh-cccceeeeeeecCCCCEEEEe
Confidence            9999999 7888887775555554 789999999999999999999999988776554 355678889999888888877


Q ss_pred             eCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        292 GTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      ...|.|.|.....-+++ .+..|+....|+.+. .+.+|++|+.|..+.+||+...-+++.+..         +.-+|..
T Consensus       166 ~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR---------ldwpVRT  236 (313)
T KOG1407|consen  166 NGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR---------LDWPVRT  236 (313)
T ss_pred             cCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc---------ccCceEE
Confidence            77899999999887777 788899888777776 578999999999999999998888887764         3445999


Q ss_pred             EEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        370 VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      +.||.+|++||+||.|..|-|=++.+|..+..++   +.++...++|+|....||.++++
T Consensus       237 lSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~---~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  237 LSFSHDGRMLASASEDHFIDIAEVETGDRVWEIP---CEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             EEeccCcceeeccCccceEEeEecccCCeEEEee---ccCCceeEEecCCCceeeEEecC
Confidence            9999999999999999999999999998888777   78999999999999999988554

>KOG0282|consensus

Probab=100.00  E-value=1.4e-33  Score=244.12  Aligned_cols=244  Identities=20%  Similarity=0.375  Sum_probs=212.7

Q ss_pred             CCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc
Q psy17902        187 RKSYPPILALAVAN-NNELVASGDNNSNIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       187 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  263 (454)
                      .+|...|+++.|.| .+.+|++++.|+.|+||++  .+.+++++.+|..+|..++|+++|..|++++.|+.|++||+++|
T Consensus       211 ~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG  290 (503)
T KOG0282|consen  211 SGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG  290 (503)
T ss_pred             cCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccc
Confidence            47999999999999 8999999999999999999  68999999999999999999999999999999999999999999


Q ss_pred             eeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEE
Q psy17902        264 AYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLW  340 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iw  340 (454)
                      +++..+. ....++|+.|+|++ +.+++|+.|+.|+.||+++++.+ .+..|-+.+..+.|. .+.+|++.+.|++++||
T Consensus       291 ~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riW  369 (503)
T KOG0282|consen  291 QVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIW  369 (503)
T ss_pred             eEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEE
Confidence            9998885 45678999999998 89999999999999999999977 677777777666655 57799999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC---ceeeEeccCCCceeeeEEEEc
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK---RTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      +.+...++..+.....+        ...++..+|++.++++-+.|+.|.+|.+...   .....+.++...|.-..+.||
T Consensus       370 e~~~~v~ik~i~~~~~h--------smP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fS  441 (503)
T KOG0282|consen  370 ENRIPVPIKNIADPEMH--------TMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFS  441 (503)
T ss_pred             EcCCCccchhhcchhhc--------cCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEc
Confidence            99988777665543322        2788999999999999999999999997644   233445554456778889999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |||++|++| +.||.+.+|+..+
T Consensus       442 pDG~~l~SG-dsdG~v~~wdwkt  463 (503)
T KOG0282|consen  442 PDGRTLCSG-DSDGKVNFWDWKT  463 (503)
T ss_pred             CCCCeEEee-cCCccEEEeechh
Confidence            999999999 8999999998754

>KOG2055|consensus

Probab=100.00  E-value=2.6e-31  Score=228.78  Aligned_cols=282  Identities=15%  Similarity=0.247  Sum_probs=226.0

Q ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee--cccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEE
Q psy17902        140 PHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV--CSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKL  216 (454)
Q Consensus       140 ~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~v  216 (454)
                      +..+.|++|.|+|....|++++.||.++||.++.....  ..+.      -...+|.+.+|.|+|. .+++++....++.
T Consensus       211 ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~------l~~fPi~~a~f~p~G~~~i~~s~rrky~ys  284 (514)
T KOG2055|consen  211 PSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIH------LEKFPIQKAEFAPNGHSVIFTSGRRKYLYS  284 (514)
T ss_pred             cCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeee------eccCccceeeecCCCceEEEecccceEEEE
Confidence            35678999999999999999999999999998754332  2222      2445899999999999 8999999999999


Q ss_pred             EeCCCccE---EeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902        217 WSSSLEHL---HTFTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       217 w~~~~~~~---~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      ||+....+   ....++. ..+.....+|++++|+..+..|.|.+....+++.+.+++ -.+.|..++|+.+++.|++++
T Consensus       285 yDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~K-ieG~v~~~~fsSdsk~l~~~~  363 (514)
T KOG2055|consen  285 YDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFK-IEGVVSDFTFSSDSKELLASG  363 (514)
T ss_pred             eeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheee-eccEEeeEEEecCCcEEEEEc
Confidence            99944333   3334443 356778889999999999999999999999999998885 678899999999999999999


Q ss_pred             CCCcEEEeeccCCeEEEEc---cccCCeEEEEecCCCEEEEEeCCCCEEEEecCC------CccceeeecccCCCCCCCC
Q psy17902        293 TDKSVRVWKIQEESQLVFN---GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK------KVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~~~~---~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~  363 (454)
                      .+|.|.+||++...++...   +.....+.+...++.+|++|+..|.|.|||..+      .+|+.++...         
T Consensus       364 ~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNL---------  434 (514)
T KOG2055|consen  364 GTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNL---------  434 (514)
T ss_pred             CCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhh---------
Confidence            9999999999999877332   333344555567889999999999999999754      2444444332         


Q ss_pred             CCcEEEEEEecCCCEEEEecC--CCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        364 PNWITSVACLHNSDLVASGSY--DGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ...|++|+|+|++++||.+|.  ...+++-.+.+......+... ..-+.|+||+|||.|.+|++| ...|++.+|..
T Consensus       435 tt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvG-Ne~grv~l~kL  511 (514)
T KOG2055|consen  435 TTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVG-NEAGRVHLFKL  511 (514)
T ss_pred             heeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEee-cCCCceeeEee
Confidence            233999999999999988875  567999999877666555442 134679999999999999999 89999999975

>KOG0306|consensus

Probab=100.00  E-value=2.8e-31  Score=241.41  Aligned_cols=276  Identities=21%  Similarity=0.381  Sum_probs=241.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      -+..|+|+.-+|+.-+||+|-.||.|+||+..+......+.      +|...|+++.|...|..|++|+.|+.|.+||+ 
T Consensus        64 ~k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfn------gHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV  137 (888)
T KOG0306|consen   64 KKAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFN------GHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLV  137 (888)
T ss_pred             ccceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeec------ccccceEEEEEcccCceEeecCCCccEEEEEec
Confidence            34679999999999999999999999999999886666665      79999999999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      ...-+..+.+|+..|+.+-|..+.+++++.+.|+.|++||+.+..+..+...|.+.|..+++.+  +.+++++.|+.+++
T Consensus       138 ~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v  215 (888)
T KOG0306|consen  138 GEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKV  215 (888)
T ss_pred             cceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecCCceEE
Confidence            6666789999999999999998889999999999999999999999999999999999999986  78899999999999


Q ss_pred             eeccC------------------------CeE------------------------------------------------
Q psy17902        300 WKIQE------------------------ESQ------------------------------------------------  307 (454)
Q Consensus       300 ~d~~~------------------------~~~------------------------------------------------  307 (454)
                      |++..                        +..                                                
T Consensus       216 ~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~  295 (888)
T KOG0306|consen  216 WELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAE  295 (888)
T ss_pred             EEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhcc
Confidence            99810                        000                                                


Q ss_pred             -----------------------------------------------------------------------EEEccccCC
Q psy17902        308 -----------------------------------------------------------------------LVFNGHSRG  316 (454)
Q Consensus       308 -----------------------------------------------------------------------~~~~~~~~~  316 (454)
                                                                                             +.+.+|...
T Consensus       296 t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~d  375 (888)
T KOG0306|consen  296 TEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSD  375 (888)
T ss_pred             ccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhh
Confidence                                                                                   011123344


Q ss_pred             eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        317 IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       317 i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      |..+++++++.++..+..+.|.+|+..+.+++.++...           .+.+..|.|.++++++|...|.+.+||+.+.
T Consensus       376 VRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~-----------y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~  444 (888)
T KOG0306|consen  376 VRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCG-----------YILASKFVPGDRYIVLGTKNGELQVFDLASA  444 (888)
T ss_pred             eeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccc-----------cEEEEEecCCCceEEEeccCCceEEEEeehh
Confidence            45566666666777778899999999999999999754           3999999999999999999999999999999


Q ss_pred             ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       397 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ..+..+..  |.+.|.+++.+||++.++++ |.|.+|++|+.
T Consensus       445 ~l~Eti~A--HdgaIWsi~~~pD~~g~vT~-saDktVkfWdf  483 (888)
T KOG0306|consen  445 SLVETIRA--HDGAIWSISLSPDNKGFVTG-SADKTVKFWDF  483 (888)
T ss_pred             hhhhhhhc--cccceeeeeecCCCCceEEe-cCCcEEEEEeE
Confidence            98888885  99999999999999999999 89999999986

>PTZ00420 coronin; Provisional

Probab=100.00  E-value=1.6e-30  Score=244.04  Aligned_cols=247  Identities=16%  Similarity=0.203  Sum_probs=193.4

Q ss_pred             EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeCC-C--------ccEEeecc
Q psy17902        160 ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSSS-L--------EHLHTFTG  229 (454)
Q Consensus       160 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~-~--------~~~~~~~~  229 (454)
                      |+.+|.|++|+......+..+.      +|...|.+++|+|+ +.+|++|+.||.|+||++. .        ..+..+.+
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~------gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g  123 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLK------GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG  123 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEc------CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec
Confidence            5567899999887654444333      78999999999996 7899999999999999983 2        13446788


Q ss_pred             cCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        230 HKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      |...|.+++|+|++.. |++++.|++|++||+.+++.+..+. |...|.+++|+|+|.+|++++.|+.|+|||++++..+
T Consensus       124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i  202 (568)
T PTZ00420        124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA  202 (568)
T ss_pred             CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE
Confidence            9999999999998875 5689999999999999998777765 6678999999999999999999999999999998876


Q ss_pred             -EEccccCCeEE--EEe----cCCCEEEEEeCCC----CEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        309 -VFNGHSRGIDM--TRR----VNDQQFITCGEDG----TLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       309 -~~~~~~~~i~~--~~~----~~~~~l~~~~~dg----~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                       .+.+|.+.+..  ++.    +++.++++++.++    .|+|||++. ..++..+....       +...+......++|
T Consensus       203 ~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~-------~~~~L~p~~D~~tg  275 (568)
T PTZ00420        203 SSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDN-------ASAPLIPHYDESTG  275 (568)
T ss_pred             EEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecC-------CccceEEeeeCCCC
Confidence             67778765432  222    4667888888664    799999985 55665554322       12223444445568


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      .++++|+.|++|++|++..+ .+..+....+..++.+++|.|...
T Consensus       276 ~l~lsGkGD~tIr~~e~~~~-~~~~l~~~~s~~p~~g~~f~Pkr~  319 (568)
T PTZ00420        276 LIYLIGKGDGNCRYYQHSLG-SIRKVNEYKSCSPFRSFGFLPKQI  319 (568)
T ss_pred             CEEEEEECCCeEEEEEccCC-cEEeecccccCCCccceEEccccc
Confidence            89999999999999999876 345555555778899999999753

>KOG0293|consensus

Probab=100.00  E-value=6e-32  Score=229.47  Aligned_cols=247  Identities=18%  Similarity=0.325  Sum_probs=213.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ...++.|  |..+|..+.||||.++|++++.+..+.+||..++.....++.     ++...+.+++|.|||..+++|+.|
T Consensus       261 l~~tlvg--h~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~-----~~~~S~~sc~W~pDg~~~V~Gs~d  333 (519)
T KOG0293|consen  261 LKKTLVG--HSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPS-----GLGFSVSSCAWCPDGFRFVTGSPD  333 (519)
T ss_pred             eeeeeec--ccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhccc-----CcCCCcceeEEccCCceeEecCCC
Confidence            6788899  999999999999999999999999999999999998877764     456789999999999999999999


Q ss_pred             CcEEEEeCCCccEEeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSSSLEHLHTFTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +.+..||+++..+....+-. ..|.+++.++||+++++.+.|..|++++..+......+ ....+|++++++.+++++++
T Consensus       334 r~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~li-se~~~its~~iS~d~k~~Lv  412 (519)
T KOG0293|consen  334 RTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLI-SEEQPITSFSISKDGKLALV  412 (519)
T ss_pred             CcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccc-cccCceeEEEEcCCCcEEEE
Confidence            99999999888877776644 56999999999999999999999999999877655443 45678999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEe----cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRR----VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      .-.+..+++||+.....+ .+.+|...-..+.+    .++.++++|+.|+.|+||+..+++++..+..         |..
T Consensus       413 nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsG---------Hs~  483 (519)
T KOG0293|consen  413 NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSG---------HSK  483 (519)
T ss_pred             EcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecC---------Ccc
Confidence            999999999999976666 77787765433322    2457899999999999999999999999875         445


Q ss_pred             cEEEEEEecCC-CEEEEecCCCcEEEEEcCC
Q psy17902        366 WITSVACLHNS-DLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       366 ~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~  395 (454)
                      .|+|++|+|.. .++|+++.||+|+||....
T Consensus       484 ~vNcVswNP~~p~m~ASasDDgtIRIWg~~~  514 (519)
T KOG0293|consen  484 TVNCVSWNPADPEMFASASDDGTIRIWGPSD  514 (519)
T ss_pred             eeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence            59999999955 4899999999999998754

>KOG0289|consensus

Probab=100.00  E-value=8e-31  Score=224.07  Aligned_cols=278  Identities=17%  Similarity=0.268  Sum_probs=238.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      ..|+++...|..+.+++|+.|..+.++|....+.+..+.      +|...|+.+.|+++...+++++.|..|+||.. ..
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~------Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~  293 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLK------GHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS  293 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhcc------CcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence            458899988888899999999999999999988877777      89999999999999999999999999999999 55


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec--cCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG--HQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      ........|..+|+.+..+|.|.||++++.||+..+.|++++.++.....  ..-.+++++|+|||.+|.+|..||.|+|
T Consensus       294 s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki  373 (506)
T KOG0289|consen  294 SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI  373 (506)
T ss_pred             cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence            56677788999999999999999999999999999999999998766543  2345899999999999999999999999


Q ss_pred             eeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        300 WKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       300 ~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                      ||+.++... .|.+|.++|..+.|.. |.+|++++.|+.|++||++..+...++......        .+.++.|.+.|.
T Consensus       374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~--------~v~s~~fD~SGt  445 (506)
T KOG0289|consen  374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK--------EVNSLSFDQSGT  445 (506)
T ss_pred             EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccc--------cceeEEEcCCCC
Confidence            999998866 8999999999999885 557888999999999999999988888765533        399999999999


Q ss_pred             EEEEecCCCcEEEEEcCCC--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        378 LVASGSYDGCVKLWKITPK--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       378 ~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +|+.++.|=+|++++-.+.  ..+..+.  .|.+..+.+.|..+.++++++ |.|..++++.
T Consensus       446 ~L~~~g~~l~Vy~~~k~~k~W~~~~~~~--~~sg~st~v~Fg~~aq~l~s~-smd~~l~~~a  504 (506)
T KOG0289|consen  446 YLGIAGSDLQVYICKKKTKSWTEIKELA--DHSGLSTGVRFGEHAQYLAST-SMDAILRLYA  504 (506)
T ss_pred             eEEeecceeEEEEEecccccceeeehhh--hcccccceeeecccceEEeec-cchhheEEee
Confidence            9999987766666654333  3333333  377889999999999999988 7887776653

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2.4e-30  Score=261.30  Aligned_cols=263  Identities=15%  Similarity=0.228  Sum_probs=210.6

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc---------cEEeecccCCC
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE---------HLHTFTGHKAP  233 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~---------~~~~~~~~~~~  233 (454)
                      +|.+++|+............ .....|...|.+++|+|++++||+|+.|+.|+||++...         ....+. +...
T Consensus       457 ~gl~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~  534 (793)
T PLN00181        457 EGLCKYLSFSKLRVKADLKQ-GDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSK  534 (793)
T ss_pred             hhhhhhhcccceEEEEeecc-ccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCc
Confidence            67788888776554333221 112357889999999999999999999999999997321         122233 4568


Q ss_pred             eEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeEEEEc
Q psy17902        234 ITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFN  311 (454)
Q Consensus       234 v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~  311 (454)
                      |.+++|++ ++.+|++++.||+|++||+.+++.+..+.+|...|++++|+| ++.+|++|+.|+.|++||++++..+...
T Consensus       535 v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~  614 (793)
T PLN00181        535 LSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI  614 (793)
T ss_pred             eeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence            99999987 478999999999999999999999999999999999999996 6789999999999999999988776333


Q ss_pred             cccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        312 GHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       312 ~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                      .+...+.++.++  ++..|++|+.||.|++||+++.. ++..+.         .|...|.++.|. ++.+|++++.|++|
T Consensus       615 ~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~---------~h~~~V~~v~f~-~~~~lvs~s~D~~i  684 (793)
T PLN00181        615 KTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI---------GHSKTVSYVRFV-DSSTLVSSSTDNTL  684 (793)
T ss_pred             ecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec---------CCCCCEEEEEEe-CCCEEEEEECCCEE
Confidence            334566666663  47789999999999999998764 333332         245569999997 67899999999999


Q ss_pred             EEEEcCCC------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        389 KLWKITPK------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       389 ~iwd~~~~------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ++||+..+      .++..+.+  |...++.++|+|++.+|+++ +.|+.|.+|+...
T Consensus       685 kiWd~~~~~~~~~~~~l~~~~g--h~~~i~~v~~s~~~~~lasg-s~D~~v~iw~~~~  739 (793)
T PLN00181        685 KLWDLSMSISGINETPLHSFMG--HTNVKNFVGLSVSDGYIATG-SETNEVFVYHKAF  739 (793)
T ss_pred             EEEeCCCCccccCCcceEEEcC--CCCCeeEEEEcCCCCEEEEE-eCCCEEEEEECCC
Confidence            99999743      45666665  77889999999999999998 8999999999653

>KOG0973|consensus

Probab=100.00  E-value=4.6e-31  Score=250.11  Aligned_cols=289  Identities=16%  Similarity=0.237  Sum_probs=229.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCce----ec--ccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        141 HRASITCIAVTSDSKHVYSAC--KDGIIIKWLLETRSK----VC--SSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~----~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      +...|.++..+|++..++||+  .||.++||+.+.--.    ..  ..........|.+.|+|+.|+|||.+||+|+.|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~   91 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR   91 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence            456799999999999999999  899999998754210    00  0111122246899999999999999999999999


Q ss_pred             cEEEEeCCC-------------------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902        213 NIKLWSSSL-------------------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       213 ~v~vw~~~~-------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  273 (454)
                      .|.||....                   +.+..+.+|...|..++|+|++.+|++++.|++|.|||..+...+..+.+|.
T Consensus        92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~  171 (942)
T KOG0973|consen   92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQ  171 (942)
T ss_pred             eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeeccc
Confidence            999998641                   2456788999999999999999999999999999999999999999999999


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccC-------CeEEEEecCCCEEEEEe----CCCCEEEEe
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR-------GIDMTRRVNDQQFITCG----EDGTLSLWS  341 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~-------~i~~~~~~~~~~l~~~~----~dg~i~iwd  341 (454)
                      +.|..+.|.|-|++|++-+.|++|+||.+...... ....+..       -....++|++.+|++.-    .-.++.|.+
T Consensus       172 s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Iie  251 (942)
T KOG0973|consen  172 SLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIE  251 (942)
T ss_pred             ccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEe
Confidence            99999999999999999999999999997764443 2222211       12344556777877654    234567776


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEec------CC-------C----EEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH------NS-------D----LVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~------~~-------~----~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      -.+.+.-..+-         +|..++.++.|+|      ..       +    .+|+|+.|++|.||.....+++..+..
T Consensus       252 R~tWk~~~~Lv---------GH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~  322 (942)
T KOG0973|consen  252 RGTWKVDKDLV---------GHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHN  322 (942)
T ss_pred             cCCceeeeeee---------cCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhh
Confidence            65555444443         3556699999998      11       1    689999999999999988888877765


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      . ....|.+++|+|||..|+++ +.||.|.+..+..
T Consensus       323 l-f~~SI~DmsWspdG~~Lfac-S~DGtV~~i~Fee  356 (942)
T KOG0973|consen  323 L-FNKSIVDMSWSPDGFSLFAC-SLDGTVALIHFEE  356 (942)
T ss_pred             h-hcCceeeeeEcCCCCeEEEE-ecCCeEEEEEcch
Confidence            4 45679999999999999988 8999999987754

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=6e-30  Score=229.00  Aligned_cols=242  Identities=27%  Similarity=0.489  Sum_probs=210.4

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +|..+|.+++|+|++++|++++.+|.|.+|++ .......+..|...+..+.|+|++++|++++.+|.|++|++.+++.+
T Consensus         7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~   86 (289)
T cd00200           7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECV   86 (289)
T ss_pred             ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccce
Confidence            68889999999999999999999999999999 56677788889999999999999999999999999999999988888


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCC
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~  344 (454)
                      ..+..|...|.++.|++++.++++++.++.|.+||+.+.... .+..|...+.++.+.+ +.++++++.++.|++||+..
T Consensus        87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~  166 (289)
T cd00200          87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT  166 (289)
T ss_pred             EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc
Confidence            888889999999999999889988888999999999977666 5666888888888877 45555555699999999998


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                      ++.+..+..         +...+.++.|+|+++.|++++.+|.|++||+..+..+..+..  +...+.+++|+|++.+++
T Consensus       167 ~~~~~~~~~---------~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~  235 (289)
T cd00200         167 GKCVATLTG---------HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG--HENGVNSVAFSPDGYLLA  235 (289)
T ss_pred             cccceeEec---------CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh--cCCceEEEEEcCCCcEEE
Confidence            887777663         334599999999999999999999999999998887777754  677999999999977777


Q ss_pred             EEecCCCceeeeeeeCC
Q psy17902        425 AGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       425 ~~~~~d~~i~~W~~~~~  441 (454)
                      ++ +.++.|.+|+...+
T Consensus       236 ~~-~~~~~i~i~~~~~~  251 (289)
T cd00200         236 SG-SEDGTIRVWDLRTG  251 (289)
T ss_pred             EE-cCCCcEEEEEcCCc
Confidence            66 67999999998653

>KOG0294|consensus

Probab=100.00  E-value=1.2e-30  Score=214.45  Aligned_cols=261  Identities=20%  Similarity=0.276  Sum_probs=215.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc--EEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE--LVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~  209 (454)
                      +.-.|..  |.++|++++.+  +.++|+|+.|-+|+|||+........+.      .|.+.|+++.|.++..  .|++|+
T Consensus        35 ~lF~~~a--H~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll------~HagsitaL~F~~~~S~shLlS~s  104 (362)
T KOG0294|consen   35 PLFAFSA--HAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILL------SHAGSITALKFYPPLSKSHLLSGS  104 (362)
T ss_pred             ccccccc--cccceeEEEec--ceeEeccCCCCcEEEEeccchhhhccee------ccccceEEEEecCCcchhheeeec
Confidence            3444555  99999999985  5999999999999999999888777666      5899999999998765  899999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      .||.|.+|+. ....+.++++|.+.|+.++.+|.+++-++.+.|+.+++||+-.|+.-..+. -...-+.+.|+|.|.++
T Consensus       105 dDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~-L~~~at~v~w~~~Gd~F  183 (362)
T KOG0294|consen  105 DDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLN-LKNKATLVSWSPQGDHF  183 (362)
T ss_pred             CCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeec-cCCcceeeEEcCCCCEE
Confidence            9999999999 888899999999999999999999999999999999999998887654443 22233459999999988


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +.++.+ .|-+|.+.+.........+..+.|+.+.++..|++|+.|+.|.+||..+..+...+..         |+..|-
T Consensus       184 ~v~~~~-~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~A---------H~~RVK  253 (362)
T KOG0294|consen  184 VVSGRN-KIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDTPLTEFLA---------HENRVK  253 (362)
T ss_pred             EEEecc-EEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCccceeeec---------chhhee
Confidence            887766 5899999887776555555778889999999999999999999999998888777764         566688


Q ss_pred             EEEEe--cCCCEEEEecCCCcEEEEEcCCC-----ceeeEeccCCCceeeeEEEE
Q psy17902        369 SVACL--HNSDLVASGSYDGCVKLWKITPK-----RTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       369 ~~~~s--~~~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~  416 (454)
                      .+.+-  |.+.+|+++|.||.|+|||+...     .++..+.   .+..++|+..
T Consensus       254 ~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n---~~~RltCl~~  305 (362)
T KOG0294|consen  254 DIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELN---TNVRLTCLRV  305 (362)
T ss_pred             eeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEee---cCCccceeee
Confidence            88843  56789999999999999999866     2333333   3455666554

>KOG1446|consensus

Probab=100.00  E-value=1.1e-29  Score=209.24  Aligned_cols=249  Identities=18%  Similarity=0.258  Sum_probs=212.2

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCcee
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAY  265 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~  265 (454)
                      ....|.++.|+++|.+|++++.|.+++|||. ++..+.++..+...+..++|....+.++.++.  |.+|+..++.+.+.
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky   92 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY   92 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence            4568999999999999999999999999999 88999999999889999999888788887776  88999999999999


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                      ++.|.||...|++|+.+|-+..+++++.|++|++||++..++.-+........++..+.|-.|+++.....|++||++..
T Consensus        93 lRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~  172 (311)
T KOG1446|consen   93 LRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSF  172 (311)
T ss_pred             EEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEeccc
Confidence            99999999999999999999999999999999999999888775544444444555666667777777779999999874


Q ss_pred             --ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee-eeEEEEcCCCCE
Q psy17902        346 --VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV-INSLVFTSDHKH  422 (454)
Q Consensus       346 --~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-v~~l~~s~d~~~  422 (454)
                        .|..++.....      .....+.|.|||+|++|+.++..+.+++.|.-+|..+..+...+..+. ..+.+|+||+++
T Consensus       173 dkgPF~tf~i~~~------~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~F  246 (311)
T KOG1446|consen  173 DKGPFTTFSITDN------DEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKF  246 (311)
T ss_pred             CCCCceeEccCCC------CccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcE
Confidence              56666655432      234489999999999999999999999999999998888887555443 357899999999


Q ss_pred             EEEEecCCCceeeeeeeCCCee
Q psy17902        423 LVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      +++| ++||+|.+|+..++.+.
T Consensus       247 vl~g-s~dg~i~vw~~~tg~~v  267 (311)
T KOG1446|consen  247 VLSG-SDDGTIHVWNLETGKKV  267 (311)
T ss_pred             EEEe-cCCCcEEEEEcCCCcEe
Confidence            9999 89999999999777543

>KOG2096|consensus

Probab=100.00  E-value=1.2e-30  Score=214.68  Aligned_cols=308  Identities=16%  Similarity=0.212  Sum_probs=228.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~  210 (454)
                      ....|+|  |.+.|++++|+.||++|+|++.|++|++|++........-.+ ... -..+..+.+.|+||-+-+++ +-.
T Consensus        78 ~~~~LKg--H~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~-R~n-ve~dhpT~V~FapDc~s~vv~~~~  153 (420)
T KOG2096|consen   78 NVSVLKG--HKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCI-RQN-VEYDHPTRVVFAPDCKSVVVSVKR  153 (420)
T ss_pred             hhhhhhc--cCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHh-hcc-ccCCCceEEEECCCcceEEEEEcc
Confidence            4556778  999999999999999999999999999999987443221111 000 12235778999999765544 445


Q ss_pred             CCcEEEEeC----CCccE---------EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCcee
Q psy17902        211 NSNIKLWSS----SLEHL---------HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT  277 (454)
Q Consensus       211 dg~v~vw~~----~~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~  277 (454)
                      ...+++|.+    ++...         ..-..|...|..+-...++.+|++++.|..|.+|++. |+.+..+......-+
T Consensus       154 g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~  232 (420)
T KOG2096|consen  154 GNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNY  232 (420)
T ss_pred             CCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeecccccccc
Confidence            568999987    22211         1123477778888888889999999999999999999 888888877777778


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccC---C------eEEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCC---
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQE---E------SQLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILK---  344 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~---~------~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~---  344 (454)
                      ..+.+|+|++|++++..--|++|.+--   +      +...+.+|...+..++|++ ...+++.+.||+++|||+.-   
T Consensus       233 ~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~  312 (420)
T KOG2096|consen  233 DAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYE  312 (420)
T ss_pred             ceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEe
Confidence            889999999999999999999998642   1      1237889999998888775 56899999999999999842   


Q ss_pred             -CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        345 -KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       345 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                       ++....+......  ..........+.++|+|+.||.+.. ..+++|..++++.+..+... |.+.|++++|+++|+++
T Consensus       313 ~~qDpk~Lk~g~~p--l~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e~~-h~~~Is~is~~~~g~~~  388 (420)
T KOG2096|consen  313 AGQDPKILKEGSAP--LHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELEDI-HSTTISSISYSSDGKYI  388 (420)
T ss_pred             cCCCchHhhcCCcc--hhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHHHh-hcCceeeEEecCCCcEE
Confidence             1111111111100  0001122448999999999887764 46999999999888777763 88999999999999999


Q ss_pred             EEEecCCCceeeeeeeCCCeeEEEEEE
Q psy17902        424 VAGIGTEHRFGRWKTIKGVKNTVAIID  450 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~~~~~~~~~~~  450 (454)
                      +++  .|..+++....++....+..+.
T Consensus       389 atc--Gdr~vrv~~ntpg~~~~V~~~~  413 (420)
T KOG2096|consen  389 ATC--GDRYVRVIRNTPGWHSRVVKLN  413 (420)
T ss_pred             eee--cceeeeeecCCCchhhHHHHhh
Confidence            988  4777888876666655554443

>KOG0299|consensus

Probab=99.98  E-value=8.8e-30  Score=219.42  Aligned_cols=252  Identities=23%  Similarity=0.374  Sum_probs=205.3

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccE----Ee-------------e-cccCCCeEEEEEcCCCCEEEE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHL----HT-------------F-TGHKAPITGLAISFECDTLYS  248 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~----~~-------------~-~~~~~~v~~~~~~~~~~~l~~  248 (454)
                      .|..++.+++++|+..++++++.+|+|.-|++ ++...    ..             - ..|...+.+++.++|+++|++
T Consensus       140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylat  219 (479)
T KOG0299|consen  140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLAT  219 (479)
T ss_pred             cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEe
Confidence            47779999999999999999999999999998 33321    01             1 268889999999999999999


Q ss_pred             EeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCE
Q psy17902        249 SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQ  327 (454)
Q Consensus       249 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~  327 (454)
                      |+.|..|.||+.++.+.+..+.+|.+.|.+++|-...+.+++++.|+.|++|++.....+ .+.+|+..|..+....-..
T Consensus       220 gg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR  299 (479)
T KOG0299|consen  220 GGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRER  299 (479)
T ss_pred             cCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccc
Confidence            999999999999999999999999999999999887788999999999999999987777 8889999998888777666


Q ss_pred             EEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC
Q psy17902        328 FITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP  406 (454)
Q Consensus       328 l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~  406 (454)
                      +++.+ .|+++++|++.....+ .+..         +...+-|++|-.+ ..|++|+.+|.|.+|++...+++.+.....
T Consensus       300 ~vtVGgrDrT~rlwKi~eesql-ifrg---------~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AH  368 (479)
T KOG0299|consen  300 CVTVGGRDRTVRLWKIPEESQL-IFRG---------GEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAH  368 (479)
T ss_pred             eEEeccccceeEEEecccccee-eeeC---------CCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccc
Confidence            66555 9999999999443222 2221         2334889998755 478899999999999999888876654321


Q ss_pred             ----------CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902        407 ----------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI  451 (454)
Q Consensus       407 ----------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~  451 (454)
                                +...|++|+..|...++++| +.+|.|++|.+..+.+.--.+..+
T Consensus       369 gv~~~~~~~~~~~Witsla~i~~sdL~asG-S~~G~vrLW~i~~g~r~i~~l~~l  422 (479)
T KOG0299|consen  369 GVIPELDPVNGNFWITSLAVIPGSDLLASG-SWSGCVRLWKIEDGLRAINLLYSL  422 (479)
T ss_pred             cccCCccccccccceeeeEecccCceEEec-CCCCceEEEEecCCccccceeeec
Confidence                      12279999999998888888 899999999999886543333333

>KOG0641|consensus

Probab=99.98  E-value=8.2e-29  Score=194.38  Aligned_cols=287  Identities=17%  Similarity=0.192  Sum_probs=224.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC------ceecccC---CcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR------SKVCSSP---FVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      -+..|.+++|+|.|.+.++|+...+++|......      ......+   .......|.+.|+|.+|+|+|.+|++|+.|
T Consensus        31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd  110 (350)
T KOG0641|consen   31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND  110 (350)
T ss_pred             chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC
Confidence            5778999999999999999999999998754321      1111111   112335688999999999999999999999


Q ss_pred             CcEEEEeCCC------ccEEeecccCCCeEEEEEcCC----CCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        212 SNIKLWSSSL------EHLHTFTGHKAPITGLAISFE----CDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       212 g~v~vw~~~~------~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      .+|++.-.+.      ..-..+.-|.+.|..++|..+    +..|++++ .|..|++-|...++..+.+.+|.+.|.++-
T Consensus       111 k~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilaly  190 (350)
T KOG0641|consen  111 KTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILALY  190 (350)
T ss_pred             ceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEEE
Confidence            9999987622      223467789999999999643    45666654 467788889999999999999999997763


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEEEEcc---cc-----CCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNG---HS-----RGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~-----~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                       +-++-++++|+.|.+|++||++-+.++....   |.     ..+..+.. +.+.+|++|-.|....+||++.+.+++.+
T Consensus       191 -swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f  269 (350)
T KOG0641|consen  191 -SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRF  269 (350)
T ss_pred             -EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeee
Confidence             4468899999999999999999888773222   22     23444443 45778888999999999999999999988


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      ..         |...|.|+.|+|...||++++.|..|++-|+...  ..+..+-...|...+..+.|+|..-.++++ +.
T Consensus       270 ~p---------hsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfiss-sa  339 (350)
T KOG0641|consen  270 HP---------HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISS-SA  339 (350)
T ss_pred             CC---------CccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeec-cC
Confidence            64         4455999999999999999999999999998754  222222222488888999999998777777 88


Q ss_pred             CCceeeeee
Q psy17902        430 EHRFGRWKT  438 (454)
Q Consensus       430 d~~i~~W~~  438 (454)
                      |.++.+|-.
T Consensus       340 dkt~tlwa~  348 (350)
T KOG0641|consen  340 DKTATLWAL  348 (350)
T ss_pred             cceEEEecc
Confidence            999999965

>KOG1407|consensus

Probab=99.98  E-value=2.7e-30  Score=206.83  Aligned_cols=244  Identities=16%  Similarity=0.261  Sum_probs=204.5

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc-c--EEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE-H--LHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~-~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~  262 (454)
                      .+|...+.+++|+.+|..|++|+.|+++.+|++... .  -....+|.+.|-.++|+| +...|++++.|.+|++||+++
T Consensus        17 ~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~   96 (313)
T KOG1407|consen   17 QGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS   96 (313)
T ss_pred             hhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence            367889999999999999999999999999999332 2  234578999999999987 467899999999999999999


Q ss_pred             ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCC-eEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902        263 RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG-IDMTRRVNDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-i~~~~~~~~~~l~~~~~dg~i~iwd  341 (454)
                      ++++..+....+.| -+.|+|+|.+++.++.|..|.+.|.++.+.......... ..+.+..++++|+.....|+|.|..
T Consensus        97 ~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILs  175 (313)
T KOG1407|consen   97 GKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILS  175 (313)
T ss_pred             CcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCceEEEEe
Confidence            99998886555554 588999999999999999999999999887743333333 3445555667777777789999999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      ....+++..+..         |+.-..||.|+|+|++||+|+.|-.+.+||+...-+++.+..  +.-+|..|+||.||+
T Consensus       176 ypsLkpv~si~A---------H~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isR--ldwpVRTlSFS~dg~  244 (313)
T KOG1407|consen  176 YPSLKPVQSIKA---------HPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISR--LDWPVRTLSFSHDGR  244 (313)
T ss_pred             cccccccccccc---------CCcceEEEEECCCCceEeeccccceeeccChhHhhhheeecc--ccCceEEEEeccCcc
Confidence            998888888875         444589999999999999999999999999998878888876  788999999999999


Q ss_pred             EEEEEecCCCceeeeeeeCCCe
Q psy17902        422 HLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       422 ~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +||++ +.|..|-|=.+.+|.+
T Consensus       245 ~lASa-SEDh~IDIA~vetGd~  265 (313)
T KOG1407|consen  245 MLASA-SEDHFIDIAEVETGDR  265 (313)
T ss_pred             eeecc-CccceEEeEecccCCe
Confidence            99999 8999887666655543

>KOG0278|consensus

Probab=99.98  E-value=1.3e-31  Score=213.00  Aligned_cols=249  Identities=19%  Similarity=0.314  Sum_probs=217.3

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      -+-+|.|  |.+.|.+..++.+...-|+++.|=+-++||.-++..+..+.       |..-|.+++|+.|.++|++|+.+
T Consensus        51 wigtfeg--hkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-------hkhivk~~af~~ds~~lltgg~e  121 (334)
T KOG0278|consen   51 WIGTFEG--HKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-------HKHIVKAVAFSQDSNYLLTGGQE  121 (334)
T ss_pred             cEEeeec--cCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-------hhheeeeEEecccchhhhccchH
Confidence            5678999  99999999999999899999999999999999999888876       77799999999999999999999


Q ss_pred             CcEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        212 SNIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       212 g~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      ..++|||+  ...+...+.+|++.|..+.|....+.|++++.|++|++||.+++..++++. ...+|+++.++++|.+|.
T Consensus       122 kllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilT  200 (334)
T KOG0278|consen  122 KLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILT  200 (334)
T ss_pred             HHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEE
Confidence            99999999  445677889999999999999999999999999999999999999999885 677899999999998876


Q ss_pred             EeeCCCcEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        290 SGGTDKSVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      ++ ..+.|.+||..+...+....-+..|..+. .|+...|++|+.|..++.||..++..+..+.        .+|.++|.
T Consensus       201 ia-~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~n--------kgh~gpVh  271 (334)
T KOG0278|consen  201 IA-YGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYN--------KGHFGPVH  271 (334)
T ss_pred             Ee-cCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecc--------cCCCCceE
Confidence            55 56789999999988875555555554444 4566789999999999999999998877641        23667799


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCcee
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  399 (454)
                      |+.|+|+|..-|+||.||+|++|....++..
T Consensus       272 cVrFSPdGE~yAsGSEDGTirlWQt~~~~~~  302 (334)
T KOG0278|consen  272 CVRFSPDGELYASGSEDGTIRLWQTTPGKTY  302 (334)
T ss_pred             EEEECCCCceeeccCCCceEEEEEecCCCch
Confidence            9999999999999999999999998877544

>KOG0294|consensus

Probab=99.97  E-value=1.9e-29  Score=207.36  Aligned_cols=271  Identities=17%  Similarity=0.271  Sum_probs=215.0

Q ss_pred             EEEEEeCCCeEEEEEcCCCc------eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeec
Q psy17902        156 HVYSACKDGIIIKWLLETRS------KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT  228 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~  228 (454)
                      .|++|++...|.-+++....      ....+........|.++|++++.  ++.++|+|+.|-+|+|||+ ....+..+.
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll   80 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILL   80 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhccee
Confidence            36777777777666654322      12222223344579999999998  5789999999999999999 677788888


Q ss_pred             ccCCCeEEEEEcCCCC--EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe
Q psy17902        229 GHKAPITGLAISFECD--TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES  306 (454)
Q Consensus       229 ~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  306 (454)
                      .|.+.|+++.|.++-.  .|++|+.||.|.+|+.....++.++++|.+.|+.++++|.+++.++.+.|+.+++||+-.++
T Consensus        81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr  160 (362)
T KOG0294|consen   81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR  160 (362)
T ss_pred             ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence            9999999999998764  89999999999999999999999999999999999999999999999999999999998877


Q ss_pred             EEEE-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        307 QLVF-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       307 ~~~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .-.. .-........+.+.+.+|+.++.++ |-+|.+.+......+...          ..+.|+.|. ++..|++|+.|
T Consensus       161 ~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~----------~r~l~~~~l-~~~~L~vG~d~  228 (362)
T KOG0294|consen  161 VAFVLNLKNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP----------KRILCATFL-DGSELLVGGDN  228 (362)
T ss_pred             cceeeccCCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc----------ccceeeeec-CCceEEEecCC
Confidence            6522 2222222344455677788777654 889998887766665433          226677775 45689999999


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEE--cCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVF--TSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~--s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +.|.+||..+..++..+..  |...|-++.+  .|++.+|+++ +.||.|++|+.....+
T Consensus       229 ~~i~~~D~ds~~~~~~~~A--H~~RVK~i~~~~~~~~~~lvTa-SSDG~I~vWd~~~~~k  285 (362)
T KOG0294|consen  229 EWISLKDTDSDTPLTEFLA--HENRVKDIASYTNPEHEYLVTA-SSDGFIKVWDIDMETK  285 (362)
T ss_pred             ceEEEeccCCCccceeeec--chhheeeeEEEecCCceEEEEe-ccCceEEEEEcccccc
Confidence            9999999998888888876  8899999884  4667788877 8999999999876643

>KOG0308|consensus

Probab=99.97  E-value=4.2e-31  Score=236.55  Aligned_cols=288  Identities=20%  Similarity=0.352  Sum_probs=235.2

Q ss_pred             CCCCeE---EEEEc-CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        141 HRASIT---CIAVT-SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       141 h~~~V~---~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      |...|.   .+..+ |.+++|+|||.||.|++|++.........+.......|...|+.++...+++.|++++.|-+|++
T Consensus        20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~   99 (735)
T KOG0308|consen   20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKV   99 (735)
T ss_pred             ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEE
Confidence            666666   45554 46778999999999999998765543333333344579999999999999999999999999999


Q ss_pred             EeC-CC--ccEEeecccCCCeEEEEE-cCCCCEEEEEeCCCcEEEEeCCCce--eEE--------Eee-ccCCceeEEEe
Q psy17902        217 WSS-SL--EHLHTFTGHKAPITGLAI-SFECDTLYSSSNDRSIKVWNIEDRA--YVE--------TLF-GHQSAITSLDI  281 (454)
Q Consensus       217 w~~-~~--~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~--~~~--------~~~-~~~~~v~~~~~  281 (454)
                      |+. ..  .++.++..|...|.|+++ .++...+++||.|+.|.+||++++.  .+.        .+. ++..+|++++.
T Consensus       100 W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~  179 (735)
T KOG0308|consen  100 WNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAM  179 (735)
T ss_pred             eecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeec
Confidence            998 22  577888999999999999 7888999999999999999999772  222        222 78889999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                      ++.|..|++|+..+.+++||.++.+.+ .+.+|...|.++... ++..++++++||+|++||+....++.++..+.    
T Consensus       180 N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~----  255 (735)
T KOG0308|consen  180 NQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHK----  255 (735)
T ss_pred             CCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEecc----
Confidence            999999999999999999999998776 888999999888766 57799999999999999999999999987643    


Q ss_pred             CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       360 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                           ..|+++..+|+-..+++|+.||.|..=|+.+......+..  ...+|..+..+.+..-+-++ ..|+.|..|...
T Consensus       256 -----e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick--~daPv~~l~~~~~~~~~Wvt-Ttds~I~rW~~~  327 (735)
T KOG0308|consen  256 -----EGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICK--EDAPVLKLHLHEHDNSVWVT-TTDSSIKRWKLE  327 (735)
T ss_pred             -----CceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeec--CCCchhhhhhccccCCceee-eccccceecCCc
Confidence                 4499999999999999999999999999988633333332  45678888877544444444 579999999764


Q ss_pred             C
Q psy17902        440 K  440 (454)
Q Consensus       440 ~  440 (454)
                      .
T Consensus       328 ~  328 (735)
T KOG0308|consen  328 P  328 (735)
T ss_pred             c
Confidence            3

>KOG0313|consensus

Probab=99.97  E-value=5.4e-30  Score=215.52  Aligned_cols=242  Identities=16%  Similarity=0.305  Sum_probs=207.4

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCce
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRA  264 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~  264 (454)
                      .|...|.++...  +.++++|+.||.+++|+..++....+.+|.++|.+++|...   ...|++++.|.++++|-.+.+.
T Consensus       103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~  180 (423)
T KOG0313|consen  103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGE  180 (423)
T ss_pred             cchhhhhhhccc--CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCch
Confidence            477788888776  77999999999999999999999999999999998888543   3469999999999999988775


Q ss_pred             eE----EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC-------------------------Ce-EEEEcccc
Q psy17902        265 YV----ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-------------------------ES-QLVFNGHS  314 (454)
Q Consensus       265 ~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-------------------------~~-~~~~~~~~  314 (454)
                      ..    ....||...|-+++..+++..+++|+.|.+|.||+..+                         .. .+.+.+|.
T Consensus       181 ~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt  260 (423)
T KOG0313|consen  181 NKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHT  260 (423)
T ss_pred             hhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccc
Confidence            43    33359999999999999999999999999999999321                         11 12678999


Q ss_pred             CCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        315 RGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       315 ~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      .++..+.|++...+++++.|.+|+.||+.++....++...          ..+.++..+|..++|++|+.|..|++||.+
T Consensus       261 ~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~----------ksl~~i~~~~~~~Ll~~gssdr~irl~DPR  330 (423)
T KOG0313|consen  261 EPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTN----------KSLNCISYSPLSKLLASGSSDRHIRLWDPR  330 (423)
T ss_pred             cceeeEEEcCCCceEeecccceEEEEEeecccceeeeecC----------cceeEeecccccceeeecCCCCceeecCCC
Confidence            9999999999999999999999999999999988887643          338999999999999999999999999998


Q ss_pred             CC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        395 PK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       395 ~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++ ..+.......|.+.|.++.|+|...+++++++.|+++++||+...
T Consensus       331 ~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~  378 (423)
T KOG0313|consen  331 TGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRST  378 (423)
T ss_pred             CCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccC
Confidence            77 223233334489999999999999998888899999999998764

>KOG0275|consensus

Probab=99.97  E-value=1.5e-30  Score=214.62  Aligned_cols=249  Identities=17%  Similarity=0.250  Sum_probs=213.0

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE--------eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLH--------TFTGHKAPITGLAISFECDTLYSSSNDRSIKVW  258 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~--------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  258 (454)
                      +..+.+-|..|+|||+||++|+.||.|.+|+. +++...        .+.-+..+|.|++|+.|...|++|+.||.|++|
T Consensus       211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW  290 (508)
T KOG0275|consen  211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW  290 (508)
T ss_pred             ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence            45567889999999999999999999999998 444332        344588899999999999999999999999999


Q ss_pred             eCCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCC
Q psy17902        259 NIEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDG  335 (454)
Q Consensus       259 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg  335 (454)
                      .+.+|.|++.|. .|...|+|+.|+.|+..+++++.|.++++.-+.+++++ .+.+|...++-+.+. ++.++++++.||
T Consensus       291 ri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg  370 (508)
T KOG0275|consen  291 RIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG  370 (508)
T ss_pred             EEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence            999999999986 89999999999999999999999999999999999998 899999999776665 678999999999


Q ss_pred             CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCC-CceeeeE
Q psy17902        336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIP-LSGVINS  413 (454)
Q Consensus       336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~  413 (454)
                      +|++|+..+..++.++....       ...+|.++-.-|.. ..++++...++|+|.++. |..++.+.... ..+...+
T Consensus       371 tvkvW~~KtteC~~Tfk~~~-------~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~  442 (508)
T KOG0275|consen  371 TVKVWHGKTTECLSTFKPLG-------TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFIN  442 (508)
T ss_pred             cEEEecCcchhhhhhccCCC-------CcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEE
Confidence            99999999999999987544       23448888877744 478888889999999986 56666665432 3456677


Q ss_pred             EEEcCCCCEEEEEecCCCceeeeeeeCCCeeE
Q psy17902        414 LVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNT  445 (454)
Q Consensus       414 l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~  445 (454)
                      ++.||.|.++++. |.|+.++.+.+..+.-..
T Consensus       443 ~~lSpkGewiYci-gED~vlYCF~~~sG~LE~  473 (508)
T KOG0275|consen  443 AILSPKGEWIYCI-GEDGVLYCFSVLSGKLER  473 (508)
T ss_pred             EEecCCCcEEEEE-ccCcEEEEEEeecCceee
Confidence            8899999999988 899999999988775443

>KOG0274|consensus

Probab=99.97  E-value=1.1e-29  Score=237.58  Aligned_cols=248  Identities=23%  Similarity=0.399  Sum_probs=216.3

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .....+.|  |.+.|.+++|..-+++|++|+.|.++++||+.++.....+.      +|...|.++...+  .++++|+.
T Consensus       240 ~i~~~l~G--H~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~------gh~stv~~~~~~~--~~~~sgs~  309 (537)
T KOG0274|consen  240 LILTRLVG--HFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQ------GHTSSVRCLTIDP--FLLVSGSR  309 (537)
T ss_pred             EEEeeccC--CCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEec------CCCceEEEEEccC--ceEeeccC
Confidence            34455899  99999999998878999999999999999999999999887      6999999988754  47888999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      |.+|++|++ ++..+..+.+|.++|.++..+  +.++++|+.|++|++||+.+++++..+.+|...|.++.+.+. ..++
T Consensus       310 D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~  386 (537)
T KOG0274|consen  310 DNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLL  386 (537)
T ss_pred             CceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEE
Confidence            999999999 678888888899999999998  789999999999999999999999999999999999988654 8999


Q ss_pred             EeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        290 SGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      +|+.|++|++||+++. +++ .+.+|...+ ......+++|++++.|++|++||...+.++..+...+        ...|
T Consensus       387 Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v-~~l~~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~--------~~~v  457 (537)
T KOG0274|consen  387 SGSLDTTIKVWDLRTKRKCIHTLQGHTSLV-SSLLLRDNFLVSSSADGTIKLWDAEEGECLRTLEGRH--------VGGV  457 (537)
T ss_pred             eeeeccceEeecCCchhhhhhhhcCCcccc-cccccccceeEeccccccEEEeecccCceeeeeccCC--------cccE
Confidence            9999999999999999 666 666666655 3334467899999999999999999999999987631        2337


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  402 (454)
                      +.+++.  ...+++++.||++++||+.++...+.+
T Consensus       458 ~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l  490 (537)
T KOG0274|consen  458 SALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL  490 (537)
T ss_pred             EEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence            777775  458899999999999999999887766

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=1.7e-28  Score=229.62  Aligned_cols=243  Identities=16%  Similarity=0.225  Sum_probs=186.8

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc--------------EEeecccCCCeEEEEEcC-CCCEEEEEeCCCcE
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEH--------------LHTFTGHKAPITGLAISF-ECDTLYSSSNDRSI  255 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~--------------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i  255 (454)
                      ..|.....++++..+++++.+.....|+..+..              ...+.+|.+.|++++|+| ++++|++|+.|++|
T Consensus        21 ~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtI  100 (493)
T PTZ00421         21 LNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTI  100 (493)
T ss_pred             eccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEE
Confidence            345555556665556666666666666642211              123678999999999999 78899999999999


Q ss_pred             EEEeCCCc-------eeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CC
Q psy17902        256 KVWNIEDR-------AYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-ND  325 (454)
Q Consensus       256 ~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~  325 (454)
                      ++||+.++       ..+..+.+|...|.+++|+|++ ++|++++.|++|+|||+.++... .+..|...+.++.|. ++
T Consensus       101 kIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG  180 (493)
T PTZ00421        101 MGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDG  180 (493)
T ss_pred             EEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCC
Confidence            99999765       3466788999999999999985 79999999999999999988776 677788888877765 57


Q ss_pred             CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec----CCCcEEEEEcCCCc-eee
Q psy17902        326 QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS----YDGCVKLWKITPKR-TLE  400 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~v~iwd~~~~~-~~~  400 (454)
                      ..|++++.|+.|++||++++..+..+..+.+        ..+..+.|.+++..|++++    .|+.|++||+.+.. ++.
T Consensus       181 ~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~--------~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~  252 (493)
T PTZ00421        181 SLLCTTSKDKKLNIIDPRDGTIVSSVEAHAS--------AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYS  252 (493)
T ss_pred             CEEEEecCCCEEEEEECCCCcEEEEEecCCC--------CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence            7899999999999999999988777654322        1245678888887777654    47899999998653 333


Q ss_pred             EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ... ......+....|++++.+|++++..|+.|++|+...+.
T Consensus       253 ~~~-~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~  293 (493)
T PTZ00421        253 TVD-LDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER  293 (493)
T ss_pred             Eec-cCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence            332 22344566778999999999985569999999998654

>KOG0301|consensus

Probab=99.97  E-value=3.3e-29  Score=226.11  Aligned_cols=282  Identities=23%  Similarity=0.419  Sum_probs=232.7

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeC-CCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVAN-NNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~-~~~~l~~~~  209 (454)
                      ..+.+.|  |...|..+++.+. -.+++++.||++++|+-.....+....+    .++.+-|.+ ++|.+ ++-.|++|+
T Consensus         6 ls~~l~g--H~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~----~~~~g~i~~~i~y~e~~~~~l~~g~   78 (745)
T KOG0301|consen    6 LSHELEG--HKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAF----EGPKGFIANSICYAESDKGRLVVGG   78 (745)
T ss_pred             eEEEecc--CccchheeEecCC-eEEeecCCCCceeeeeccCcccccceec----ccCcceeeccceeccccCcceEeec
Confidence            4567888  9999999998764 4899999999999998765544432221    245555655 77765 455699999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      .|+.|.+|.. ...++.++++|...|+|++...++. +++||.|.++++|-..  ++...+.+|+..|+++...|.+ .+
T Consensus        79 ~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~  154 (745)
T KOG0301|consen   79 MDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TY  154 (745)
T ss_pred             ccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cE
Confidence            9999999999 8889999999999999999887776 9999999999999864  5566689999999999999988 78


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +|||.|.+|++|.-.+ ....+.+|...+..+...++..|++++.||.|++|++ ++.++..+..         |...+.
T Consensus       155 vTgsaDKtIklWk~~~-~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~g---------htn~vY  223 (745)
T KOG0301|consen  155 VTGSADKTIKLWKGGT-LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHG---------HTNFVY  223 (745)
T ss_pred             EeccCcceeeeccCCc-hhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeec---------cceEEE
Confidence            8999999999998732 2338899999999999999999999999999999999 6777777653         455699


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++...+++..|++++.|++++||+..  .+.+.+..  ....|+++.+-++|.. ++| +.||.|++|...+.
T Consensus       224 sis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~l--PttsiWsa~~L~NgDI-vvg-~SDG~VrVfT~~k~  290 (745)
T KOG0301|consen  224 SISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITL--PTTSIWSAKVLLNGDI-VVG-GSDGRVRVFTVDKD  290 (745)
T ss_pred             EEEecCCCCeEEEecCCceEEEeecC--ceEEEEec--CccceEEEEEeeCCCE-EEe-ccCceEEEEEeccc
Confidence            99988888899999999999999986  67777764  3447999999988874 455 68999999987643

>KOG0277|consensus

Probab=99.97  E-value=5.4e-30  Score=204.33  Aligned_cols=239  Identities=20%  Similarity=0.330  Sum_probs=196.9

Q ss_pred             CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~  218 (454)
                      -.+.+..++|+++ .+.+++++.||+++|||+.....     .....+.|...|.++.|++ ++..+++++.|++|++|+
T Consensus        59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~-----Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~  133 (311)
T KOG0277|consen   59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSK-----PIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWD  133 (311)
T ss_pred             cccceeEeeecCCCcceEEEEecCceEEEeccCCCCc-----chhHHHhhhhheEEeccccccceeEEeeccCCceEeec
Confidence            4577999999986 57889999999999999654322     1122236889999999998 456778889999999999


Q ss_pred             C-CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC-CCEEEEeeCCC
Q psy17902        219 S-SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK-NRVISSGGTDK  295 (454)
Q Consensus       219 ~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg  295 (454)
                      . ....+.++.+|...|....|+| ..+.+++++.|+++++||++..-....+..|...|.|+.|+.- .++|+||+.|+
T Consensus       134 ~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~  213 (311)
T KOG0277|consen  134 PNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDN  213 (311)
T ss_pred             CCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCc
Confidence            9 7788999999999999999999 5689999999999999999865444558889999999999864 57899999999


Q ss_pred             cEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEE
Q psy17902        296 SVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       296 ~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      .|++||+++-+..  .+.+|.-.|..+.+++  ...|++++.|-+++|||...+. .+.+...         |...+..+
T Consensus       214 ~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~---------HtEFv~g~  284 (311)
T KOG0277|consen  214 LVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDH---------HTEFVCGL  284 (311)
T ss_pred             eEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhc---------cceEEecc
Confidence            9999999986554  6788999998888876  4679999999999999997543 3333332         44558999


Q ss_pred             EEec-CCCEEEEecCCCcEEEEEc
Q psy17902        371 ACLH-NSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       371 ~~s~-~~~~l~~~~~dg~v~iwd~  393 (454)
                      .||+ ++.++|+++.|+.++||+.
T Consensus       285 Dws~~~~~~vAs~gWDe~l~Vw~p  308 (311)
T KOG0277|consen  285 DWSLFDPGQVASTGWDELLYVWNP  308 (311)
T ss_pred             ccccccCceeeecccccceeeecc
Confidence            9998 4559999999999999984

>KOG0639|consensus

Probab=99.97  E-value=1.4e-29  Score=220.38  Aligned_cols=281  Identities=17%  Similarity=0.276  Sum_probs=222.6

Q ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        140 PHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       140 ~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      .|..-|.++.+|...++++||+. |.|+|||+........+... ........|.++.+.|||+.|++|+.-.++.|||+
T Consensus       417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqL-dcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL  494 (705)
T KOG0639|consen  417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQL-DCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL  494 (705)
T ss_pred             ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccc-cccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence            48888999999999999999986 89999999754221111100 00124457899999999999999999999999999


Q ss_pred             C---CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        220 S---LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       220 ~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      .   ......+....-..++++.+||.+..+++..||.|.|||+.+...++.|.+|...+.||.++++|..|.+|+.|++
T Consensus       495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt  574 (705)
T KOG0639|consen  495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT  574 (705)
T ss_pred             cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence            2   2222334444456788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeccCCeEEEEccccCCeE-EEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        297 VRVWKIQEESQLVFNGHSRGID-MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       297 i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      |+.||++.+..+.-......|. .-..+.++.+++|-.++.+.|........ +.+.         .|...|.++.|.+.
T Consensus       575 vRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~k-yqlh---------lheScVLSlKFa~c  644 (705)
T KOG0639|consen  575 VRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEK-YQLH---------LHESCVLSLKFAYC  644 (705)
T ss_pred             eeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEEEecCCccc-eeec---------ccccEEEEEEeccc
Confidence            9999999988774444444443 33456788999999999988876643322 2221         15566999999999


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      |+++++.+.|+.+..|...-|..+....   ....|.++.+|.|.++|++|+ .|..-.+|
T Consensus       645 GkwfvStGkDnlLnawrtPyGasiFqsk---E~SsVlsCDIS~ddkyIVTGS-GdkkATVY  701 (705)
T KOG0639|consen  645 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISFDDKYIVTGS-GDKKATVY  701 (705)
T ss_pred             CceeeecCchhhhhhccCccccceeecc---ccCcceeeeeccCceEEEecC-CCcceEEE
Confidence            9999999999999999998887666555   567899999999999999994 45444343

>KOG0310|consensus

Probab=99.97  E-value=5.9e-29  Score=215.94  Aligned_cols=236  Identities=18%  Similarity=0.315  Sum_probs=201.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~  219 (454)
                      ....|+++.|-.||++||+|...|.|+|||+.+...+..+.      +|..+|..+.|+|. +..+++|+.|+.+++||+
T Consensus        67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~------ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~  140 (487)
T KOG0310|consen   67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLY------AHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDL  140 (487)
T ss_pred             hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHh------hccCceeEEEecccCCeEEEecCCCceEEEEEc
Confidence            67789999999999999999999999999976654555554      69999999999995 567888888999999999


Q ss_pred             CCccE-EeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        220 SLEHL-HTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       220 ~~~~~-~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      ++..+ ..+.+|++.|.|.+|+|- +..+++||.||.|++||++.. ..+..+ .|..+|..+.+.|.|..|++++. ..
T Consensus       141 s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~  218 (487)
T KOG0310|consen  141 STAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NS  218 (487)
T ss_pred             CCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-Ce
Confidence            55444 478999999999999995 568999999999999999987 555555 69999999999999999998864 57


Q ss_pred             EEEeeccCCeEE--EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        297 VRVWKIQEESQL--VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       297 i~i~d~~~~~~~--~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      |+|||+-++.+.  .+..|...++|+.+. ++..|++++-|+.|++||+.+.+.++.+..          +++|.+++.+
T Consensus       219 vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~----------~~pvLsiavs  288 (487)
T KOG0310|consen  219 VKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY----------PGPVLSIAVS  288 (487)
T ss_pred             EEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeec----------ccceeeEEec
Confidence            999999976665  444599999998876 467899999999999999998888888875          4449999999


Q ss_pred             cCCCEEEEecCCCcEEEEEcC
Q psy17902        374 HNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       374 ~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      |++..++.|..||.+.+-+..
T Consensus       289 ~dd~t~viGmsnGlv~~rr~~  309 (487)
T KOG0310|consen  289 PDDQTVVIGMSNGLVSIRRRE  309 (487)
T ss_pred             CCCceEEEecccceeeeehhh
Confidence            999999999999988877443

>KOG0305|consensus

Probab=99.97  E-value=1.7e-28  Score=221.24  Aligned_cols=240  Identities=16%  Similarity=0.291  Sum_probs=206.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      +...|+++.|+++|.+|++|..+|.|.|||..+.+.+..+..     .|...|-+++|.  +..+.+|+.++.|..+|+ 
T Consensus       216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~-----~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR  288 (484)
T KOG0305|consen  216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRG-----SHASRVGSLAWN--SSVLSSGSRDGKILNHDVR  288 (484)
T ss_pred             CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccC-----CcCceeEEEecc--CceEEEecCCCcEEEEEEe
Confidence            478899999999999999999999999999998887777663     388899999998  668999999999999999 


Q ss_pred             CCcc-EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEee--CCC
Q psy17902        220 SLEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGG--TDK  295 (454)
Q Consensus       220 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg  295 (454)
                      .... ..++.+|...|+.+.|++++.+|++|+.|+.+.|||.....++..+..|...|..++|+|-. .+||+|+  .|+
T Consensus       289 ~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~  368 (484)
T KOG0305|consen  289 ISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR  368 (484)
T ss_pred             cchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence            3333 33488999999999999999999999999999999998888888999999999999999964 7888864  699


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEecC-CCEEEEE--eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQFITC--GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      .|++||..++..+........|..+.|.. .+.|+++  ..++.|.||+..+.+.+..+..         |...|..+++
T Consensus       369 ~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~g---------H~~RVl~la~  439 (484)
T KOG0305|consen  369 CIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLG---------HTSRVLYLAL  439 (484)
T ss_pred             EEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecC---------CcceeEEEEE
Confidence            99999999999996666677777666664 4445543  3678999999998777766653         5666999999


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      +|+|..|++|+.|.++++|++...
T Consensus       440 SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  440 SPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             CCCCCEEEEecccCcEEeccccCC
Confidence            999999999999999999999775

>KOG1539|consensus

Probab=99.97  E-value=1.4e-27  Score=219.88  Aligned_cols=288  Identities=17%  Similarity=0.251  Sum_probs=234.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~  210 (454)
                      .+.+|++  +...|+++.=+|--..+|.|..+|+|.++|+...+.+..+..      ..+.|+.++|..||+ .|++|+.
T Consensus       194 ~v~~f~~--~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~------d~g~VtslSFrtDG~p~las~~~  265 (910)
T KOG1539|consen  194 VVYTFQE--FFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQ------DWGRVTSLSFRTDGNPLLASGRS  265 (910)
T ss_pred             EEEEecc--cccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEc------cccceeEEEeccCCCeeEEeccC
Confidence            5677888  999999999999989999999999999999999998888762      358999999999987 4666777


Q ss_pred             CCcEEEEeCCCccEEe-e-ccc----------------------------------------------C-----------
Q psy17902        211 NSNIKLWSSSLEHLHT-F-TGH----------------------------------------------K-----------  231 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~-~-~~~----------------------------------------------~-----------  231 (454)
                      .|.+.+||++.+.+.. + ..|                                              .           
T Consensus       266 ~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~  345 (910)
T KOG1539|consen  266 NGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGS  345 (910)
T ss_pred             CceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeecc
Confidence            7999999984221110 0 011                                              1           


Q ss_pred             --------------------------------------------------------------------------------
Q psy17902        232 --------------------------------------------------------------------------------  231 (454)
Q Consensus       232 --------------------------------------------------------------------------------  231 (454)
                                                                                                      
T Consensus       346 ~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~  425 (910)
T KOG1539|consen  346 QGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAY  425 (910)
T ss_pred             CcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEE
Confidence                                                                                            


Q ss_pred             -----------------------CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEEeecCC
Q psy17902        232 -----------------------APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLDILAKN  285 (454)
Q Consensus       232 -----------------------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~  285 (454)
                                             ..+++++.++.|++.+.|+..|.|-+|++.+|-...++   ..|.++|++++...-+
T Consensus       426 tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n  505 (910)
T KOG1539|consen  426 TWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTN  505 (910)
T ss_pred             EEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCC
Confidence                                   13566777777778888888888888888888777666   4799999999998888


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +.+++++.+|.+.+||...........-...+.++.. .....++++..|-.|+++|+.+.+.++.+..         |.
T Consensus       506 ~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~g---------h~  576 (910)
T KOG1539|consen  506 RLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWG---------HG  576 (910)
T ss_pred             ceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhc---------cc
Confidence            9999999999999999998776533333334444444 4567888899999999999999888888764         45


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      +.|++++|||+|++|++++.|++|++||+.++.++..+.   ...+++++.|||+|.+||++.-+...|++|-..
T Consensus       577 nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~---vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk  648 (910)
T KOG1539|consen  577 NRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL---VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK  648 (910)
T ss_pred             cceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe---cCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence            569999999999999999999999999999999988876   578899999999999999996666889999654

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=3e-27  Score=222.02  Aligned_cols=230  Identities=17%  Similarity=0.196  Sum_probs=174.9

Q ss_pred             ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCce--------eEEEeeccCCcee
Q psy17902        208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRA--------YVETLFGHQSAIT  277 (454)
Q Consensus       208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~v~  277 (454)
                      |+.++.|.+|+. ....+..+.+|.+.|.+++|+|+ +.+|++|+.||+|++||+.++.        .+..+.+|...|.
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~  129 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS  129 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence            566789999998 55677888999999999999996 7899999999999999997642        3346778999999


Q ss_pred             EEEeecCCCE-EEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        278 SLDILAKNRV-ISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       278 ~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      +++|+|++.. |++++.|++|+|||++++.......+...+.++.|. ++.+|++++.|+.|+|||++++..+..+..+.
T Consensus       130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~  209 (568)
T PTZ00420        130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHD  209 (568)
T ss_pred             EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEeccc
Confidence            9999999865 578999999999999998766333355667777665 57788888899999999999998887776433


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCC----cEEEEEcCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDG----CVKLWKITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----~v~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      +..    ....+....|++++.+|++++.|+    +|+|||+.. +.++..+....+.+.+......++|.++++| +.|
T Consensus       210 g~~----~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG-kGD  284 (568)
T PTZ00420        210 GGK----NTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG-KGD  284 (568)
T ss_pred             CCc----eeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE-ECC
Confidence            211    001123344568888999888774    799999985 4566555432234444444455567777777 789


Q ss_pred             CceeeeeeeCCC
Q psy17902        431 HRFGRWKTIKGV  442 (454)
Q Consensus       431 ~~i~~W~~~~~~  442 (454)
                      +.|++|+...+.
T Consensus       285 ~tIr~~e~~~~~  296 (568)
T PTZ00420        285 GNCRYYQHSLGS  296 (568)
T ss_pred             CeEEEEEccCCc
Confidence            999999986653

>KOG0643|consensus

Probab=99.96  E-value=9.2e-28  Score=193.02  Aligned_cols=231  Identities=19%  Similarity=0.280  Sum_probs=197.8

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +|..+++.+.|+.+|.+|++++.|..+.||-. +++.+-++.+|++.|+|+..+.+.+++++|+.|.++++||+.+|+++
T Consensus         8 GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~l   87 (327)
T KOG0643|consen    8 GHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQL   87 (327)
T ss_pred             cCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEE
Confidence            79999999999999999999999999999987 99999999999999999999999999999999999999999999999


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeC-----CCcEEEeeccC-------CeE-EEEccccCCeE-EEEecCCCEEEEEe
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGT-----DKSVRVWKIQE-------ESQ-LVFNGHSRGID-MTRRVNDQQFITCG  332 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~-------~~~-~~~~~~~~~i~-~~~~~~~~~l~~~~  332 (454)
                      ..+. ...+|..+.|+++|++++....     .+.|.++|++.       ..+ ..+..+...++ .++.+-+..+++|.
T Consensus        88 a~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Gh  166 (327)
T KOG0643|consen   88 ATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGH  166 (327)
T ss_pred             EEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEec
Confidence            8885 6778999999999998876643     46799999983       332 24455555554 44555688999999


Q ss_pred             CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeee
Q psy17902        333 EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVIN  412 (454)
Q Consensus       333 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~  412 (454)
                      .||.|.+||++++..+......        |...|+.|+++|+..++++++.|.+-++||+.+-..+.++.   ...||+
T Consensus       167 e~G~is~~da~~g~~~v~s~~~--------h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~---te~PvN  235 (327)
T KOG0643|consen  167 EDGSISIYDARTGKELVDSDEE--------HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT---TERPVN  235 (327)
T ss_pred             CCCcEEEEEcccCceeeechhh--------hccccccccccCCcceEEecccCccceeeeccceeeEEEee---eccccc
Confidence            9999999999998655443322        34459999999999999999999999999999888777776   578999


Q ss_pred             EEEEcCCCCEEEEEecCC
Q psy17902        413 SLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       413 ~l~~s~d~~~l~~~~~~d  430 (454)
                      +.+++|-..+++.++|.+
T Consensus       236 ~aaisP~~d~VilgGGqe  253 (327)
T KOG0643|consen  236 TAAISPLLDHVILGGGQE  253 (327)
T ss_pred             ceecccccceEEecCCce
Confidence            999999999999886654

>KOG1408|consensus

Probab=99.96  E-value=4.4e-28  Score=219.51  Aligned_cols=290  Identities=23%  Similarity=0.282  Sum_probs=230.9

Q ss_pred             CCCCeEEEEEcCC-----------CCEEEEEeCCCeEEEEEcCCCceecc------------cCCcc-------------
Q psy17902        141 HRASITCIAVTSD-----------SKHVYSACKDGIIIKWLLETRSKVCS------------SPFVK-------------  184 (454)
Q Consensus       141 h~~~V~~~~~s~~-----------~~~l~~~~~dg~i~iwd~~~~~~~~~------------~~~~~-------------  184 (454)
                      |+..|+.+.--|-           ...++|++.||+|++|+++....-..            +....             
T Consensus       368 HS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~  447 (1080)
T KOG1408|consen  368 HSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGI  447 (1080)
T ss_pred             ccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCc
Confidence            8888888776551           13688999999999999986221111            00000             


Q ss_pred             ------cCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC---CCCEEEEEeCCCc
Q psy17902        185 ------TDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF---ECDTLYSSSNDRS  254 (454)
Q Consensus       185 ------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~  254 (454)
                            ........+.+++.+|+|++||+|..-|+++||++ +......+..|...|.|+.|+.   ..++|++++.|..
T Consensus       448 fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRl  527 (1080)
T KOG1408|consen  448 FDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRL  527 (1080)
T ss_pred             ccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCce
Confidence                  00123347999999999999999999999999999 7777888899999999999985   3578999999999


Q ss_pred             EEEEeCCCc-eeEEEeeccCCceeEEEeecCC--CEEEEeeCCCcEEEeeccCCe-EEEEcccc------CCeEEEEecC
Q psy17902        255 IKVWNIEDR-AYVETLFGHQSAITSLDILAKN--RVISSGGTDKSVRVWKIQEES-QLVFNGHS------RGIDMTRRVN  324 (454)
Q Consensus       255 i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~------~~i~~~~~~~  324 (454)
                      |.|||+... .+++++.+|...|+++.|.-+|  ..+++++.|..|.+--.+... -..+..|.      ....+..-+.
T Consensus       528 IHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~  607 (1080)
T KOG1408|consen  528 IHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPT  607 (1080)
T ss_pred             EEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCC
Confidence            999998643 5677889999999999998776  678899999887654333211 11222222      2223444556


Q ss_pred             CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        325 DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       325 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      ..++++++.|..|+||++.+++....+...++      |.+....+...|.|.|||+...|.++.++|+.+|+++....+
T Consensus       608 ~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~------~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G  681 (1080)
T KOG1408|consen  608 SKLVVTVCQDRNIRIFDIESGKQVKSFKGSRD------HEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG  681 (1080)
T ss_pred             cceEEEEecccceEEEeccccceeeeeccccc------CCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC
Confidence            78999999999999999999999999987665      445588899999999999999999999999999999998887


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                        |...|+.+.|++|.++|++. +.||.|.+|.+.
T Consensus       682 --HsE~VTG~kF~nDCkHlISv-sgDgCIFvW~lp  713 (1080)
T KOG1408|consen  682 --HSEAVTGVKFLNDCKHLISV-SGDGCIFVWKLP  713 (1080)
T ss_pred             --cchheeeeeecccchhheee-cCCceEEEEECc
Confidence              99999999999999999998 789999999874

>KOG0640|consensus

Probab=99.96  E-value=9.9e-29  Score=202.68  Aligned_cols=249  Identities=20%  Similarity=0.323  Sum_probs=208.0

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-------------------CccEEeecccCCCeEEEEEcCCCCEEEE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS-------------------LEHLHTFTGHKAPITGLAISFECDTLYS  248 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~  248 (454)
                      .|..++.+.+|++||.++|+|+.|..|+|+|+.                   -..+.++..|...|+++.|+|....|++
T Consensus       110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS  189 (430)
T KOG0640|consen  110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS  189 (430)
T ss_pred             ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence            588899999999999999999999999999963                   1236778899999999999999999999


Q ss_pred             EeCCCcEEEEeCCCceeEEEe--eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEe
Q psy17902        249 SSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRR  322 (454)
Q Consensus       249 ~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~  322 (454)
                      |+.|++|++||.......+.+  .....+|.+|+|+|.|.+|++|....++++||+.+-++.    .-..|...|+++.+
T Consensus       190 ~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Y  269 (430)
T KOG0640|consen  190 GSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRY  269 (430)
T ss_pred             ccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEe
Confidence            999999999999765433222  234578999999999999999999999999999998887    34567788888876


Q ss_pred             c-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        323 V-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       323 ~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      + .+...++++.||.|++||--+++++.++...|+.       ..|.+..|..+|+||++.+.|..|++|.+.+++.+..
T Consensus       270 s~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~g-------sevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~  342 (430)
T KOG0640|consen  270 SSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGG-------SEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKE  342 (430)
T ss_pred             cCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCC-------ceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEE
Confidence            6 5778899999999999999999999999877753       3499999999999999999999999999999999998


Q ss_pred             eccCCCcee---eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        402 LQDIPLSGV---INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       402 ~~~~~~~~~---v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +.+....+.   -+...|+....|++.---..+.+.-||..++.+
T Consensus       343 YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr  387 (430)
T KOG0640|consen  343 YTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADR  387 (430)
T ss_pred             EecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhh
Confidence            887533332   345678877777776644567788888766543

>KOG0973|consensus

Probab=99.96  E-value=3.5e-28  Score=230.68  Aligned_cols=254  Identities=19%  Similarity=0.287  Sum_probs=207.7

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC---c---------eecccCCcccCCCCCCceEEEEEeC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR---S---------KVCSSPFVKTDRKSYPPILALAVAN  200 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~---~---------~~~~~~~~~~~~~~~~~v~~~~~~~  200 (454)
                      +.....  |.+.|+|+.|+|||.+||+|+.|+.|.||.....   .         ............+|...|..++|+|
T Consensus        62 l~~m~~--h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp  139 (942)
T KOG0973|consen   62 LCTMDD--HDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP  139 (942)
T ss_pred             heeecc--ccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence            334445  9999999999999999999999999999988731   0         0111112233357999999999999


Q ss_pred             CCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc------C
Q psy17902        201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH------Q  273 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~  273 (454)
                      ++.+|++++.|++|.||+. +...+..+.+|.+.|..+.|.|-|++|++-+.|++|+||++.+......+..+      .
T Consensus       140 ~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~  219 (942)
T KOG0973|consen  140 DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLT  219 (942)
T ss_pred             CccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCc
Confidence            9999999999999999999 77889999999999999999999999999999999999998877666666443      3


Q ss_pred             CceeEEEeecCCCEEEEeeC----CCcEEEeeccCCeE-EEEccccCCeEEEEecC------CC------------EEEE
Q psy17902        274 SAITSLDILAKNRVISSGGT----DKSVRVWKIQEESQ-LVFNGHSRGIDMTRRVN------DQ------------QFIT  330 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~------~~------------~l~~  330 (454)
                      ..+..+.|+|||.+|++...    -.++.|.+-.+.+. ..+.+|..++.++.|.+      ..            .+++
T Consensus       220 T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~Av  299 (942)
T KOG0973|consen  220 TFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAV  299 (942)
T ss_pred             ceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEE
Confidence            45788999999999988643    23677777766653 38899999999998863      11            5678


Q ss_pred             EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        331 CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      |+.|++|.||.....+|+..+....        ...|..++|+|||..|+++|.||+|.++.+...
T Consensus       300 gSqDrSlSVW~T~~~RPl~vi~~lf--------~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~  357 (942)
T KOG0973|consen  300 GSQDRSLSVWNTALPRPLFVIHNLF--------NKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK  357 (942)
T ss_pred             ecCCccEEEEecCCCCchhhhhhhh--------cCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence            8999999999998888877654332        233999999999999999999999999998754

>KOG1274|consensus

Probab=99.96  E-value=3.1e-27  Score=220.02  Aligned_cols=274  Identities=16%  Similarity=0.240  Sum_probs=221.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |+..-+.++|.|+|.+|++++.||.|++|+.... .....+.      .+...|.+++.  ++.+|++|+.+++|.+|.+
T Consensus        12 ht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~------~~g~~v~~ia~--~s~~f~~~s~~~tv~~y~f   83 (933)
T KOG1274|consen   12 HTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETID------ISGELVSSIAC--YSNHFLTGSEQNTVLRYKF   83 (933)
T ss_pred             ccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhh------ccCceeEEEee--cccceEEeeccceEEEeeC
Confidence            9999999999999999999999999999987665 3333322      14556766665  4558999999999999999


Q ss_pred             -CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        220 -SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       220 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                       ++..-..+...+-++.+++|+.+|++++.||.|-.|++.++.+......+.+|..+|.++.|+|++++|++.+.||.|+
T Consensus        84 ps~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~  163 (933)
T KOG1274|consen   84 PSGEEDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQ  163 (933)
T ss_pred             CCCCccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEE
Confidence             4444445555678999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeeccCCeEEE-Ecc-------c-cCCeE-EEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        299 VWKIQEESQLV-FNG-------H-SRGID-MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       299 i~d~~~~~~~~-~~~-------~-~~~i~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +||+.++.... +.+       . ...+. ..|.+.+..|++.+.|+.|.+|+.........+.....       ...+.
T Consensus       164 iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~-------ss~~~  236 (933)
T KOG1274|consen  164 IWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLS-------SSKFS  236 (933)
T ss_pred             EEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccccc-------ccceE
Confidence            99999876651 111       1 22233 34455678999999999999999999988888765442       22389


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      .++|+|+|.|||+++.||.|.|||+.+-..      +.....|++++|-|++..|-.. ...|...+|
T Consensus       237 ~~~wsPnG~YiAAs~~~g~I~vWnv~t~~~------~~~~~~Vc~~aw~p~~n~it~~-~~~g~~~~~  297 (933)
T KOG1274|consen  237 DLQWSPNGKYIAASTLDGQILVWNVDTHER------HEFKRAVCCEAWKPNANAITLI-TALGTLGVS  297 (933)
T ss_pred             EEEEcCCCcEEeeeccCCcEEEEecccchh------ccccceeEEEecCCCCCeeEEE-eeccccccC
Confidence            999999999999999999999999987211      2245679999999998877555 455555555

>KOG0772|consensus

Probab=99.96  E-value=4.4e-28  Score=211.69  Aligned_cols=247  Identities=17%  Similarity=0.254  Sum_probs=190.8

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC-----ccEEee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSL-----EHLHTF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-----~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      +|...|.++++.|.|..|++|+.|-.|++||+.+     .....+ ......|.+++|++.+..|++.+.....+|+|-.
T Consensus       165 hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRd  244 (641)
T KOG0772|consen  165 HGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRD  244 (641)
T ss_pred             CCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccC
Confidence            4677899999999999999999999999999833     112222 2345689999999999999999999999999976


Q ss_pred             CceeEEE------------eeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE--EEcc-----cc-CCeEEE
Q psy17902        262 DRAYVET------------LFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL--VFNG-----HS-RGIDMT  320 (454)
Q Consensus       262 ~~~~~~~------------~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~-----~~-~~i~~~  320 (454)
                      ....+..            -++|...++|.+|+|.. ..+++++.||+++|||+...+..  .+..     .. ...+|.
T Consensus       245 G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~  324 (641)
T KOG0772|consen  245 GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCA  324 (641)
T ss_pred             CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeee
Confidence            5443322            24799999999999986 67899999999999999865432  1211     11 223566


Q ss_pred             EecCCCEEEEEeCCCCEEEEecCCCc--cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-c
Q psy17902        321 RRVNDQQFITCGEDGTLSLWSILKKV--PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-R  397 (454)
Q Consensus       321 ~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~  397 (454)
                      +.+++..|++|+.||+|.+|+.....  +...+...|..      ...|+||.||++|++|++-+.|+++++||++.. +
T Consensus       325 ~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~------g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk  398 (641)
T KOG0772|consen  325 WNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLP------GQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK  398 (641)
T ss_pred             cCCCcchhhhcccCCceeeeecCCcccccceEeeeccCC------CCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence            66678889999999999999986543  33333333322      224999999999999999999999999999876 6


Q ss_pred             eeeEeccCCCceeeeEEEEcCCCCEEEEEecC-----CCceeeeeeeC
Q psy17902        398 TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT-----EHRFGRWKTIK  440 (454)
Q Consensus       398 ~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~-----d~~i~~W~~~~  440 (454)
                      ++....+++...+-+.++|||+.+.|++|++.     .+.+.+++..+
T Consensus       399 pL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  399 PLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT  446 (641)
T ss_pred             chhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc
Confidence            77777777777788999999999999998653     45567776543

>KOG0288|consensus

Probab=99.96  E-value=4.7e-29  Score=212.06  Aligned_cols=243  Identities=19%  Similarity=0.313  Sum_probs=207.2

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA  264 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  264 (454)
                      .|.+.+..+.|-++...|++|+.|..|++|+..+   ..+.++.+..++|+++.|.+++.++++++.|+.+++|++...+
T Consensus       173 ~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r  252 (459)
T KOG0288|consen  173 AHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR  252 (459)
T ss_pred             ccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchh
Confidence            4778899999999988999999999999999933   3567788889999999999999999999999999999999999


Q ss_pred             eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        265 YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      ...++.+|+..|+++.|......+++|+.|.+|++||+....+.........+..+... ...+++|..|+.|++||+++
T Consensus       253 ~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~-~~~~~SgH~DkkvRfwD~Rs  331 (459)
T KOG0288|consen  253 LRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCS-ISDVISGHFDKKVRFWDIRS  331 (459)
T ss_pred             hhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEec-ceeeeecccccceEEEeccC
Confidence            99999999999999999877777999999999999999997777333222223222222 55678888999999999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKH  422 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~  422 (454)
                      ..+...++...          .|+++..+++|..|.+++.|.++.+.|+.+......+...  ......+.++|||++.|
T Consensus       332 ~~~~~sv~~gg----------~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~Y  401 (459)
T KOG0288|consen  332 ADKTRSVPLGG----------RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSY  401 (459)
T ss_pred             CceeeEeecCc----------ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCce
Confidence            99999888644          3999999999999999999999999999988766665542  23445899999999999


Q ss_pred             EEEEecCCCceeeeeeeCCC
Q psy17902        423 LVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +++| |.||.|++|++.++.
T Consensus       402 vaAG-S~dgsv~iW~v~tgK  420 (459)
T KOG0288|consen  402 VAAG-SADGSVYIWSVFTGK  420 (459)
T ss_pred             eeec-cCCCcEEEEEccCce
Confidence            9999 899999999998764

>KOG0641|consensus

Probab=99.96  E-value=1.7e-26  Score=181.42  Aligned_cols=259  Identities=20%  Similarity=0.312  Sum_probs=202.9

Q ss_pred             ccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----C
Q psy17902        127 ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----N  202 (454)
Q Consensus       127 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~  202 (454)
                      .++...++.-+.  |.+.|+|.+|+|+|.+|++|+.|.+|++.-+........-. .....-|.+.|..++|-.+    +
T Consensus        76 ~pp~v~~kr~kh--hkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~-dle~nmhdgtirdl~fld~~~s~~  152 (350)
T KOG0641|consen   76 QPPSVLCKRNKH--HKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGH-DLEFNMHDGTIRDLAFLDDPESGG  152 (350)
T ss_pred             CCCeEEeeeccc--cCccEEEEEecCccCeEEecCCCceEEEEecccccccccCc-ceeeeecCCceeeeEEecCCCcCc
Confidence            344455666666  99999999999999999999999999998665433322111 1112248889999999653    5


Q ss_pred             cEEEEecC-CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-------cC
Q psy17902        203 ELVASGDN-NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-------HQ  273 (454)
Q Consensus       203 ~~l~~~~~-dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~  273 (454)
                      .+|++++. |..|++-|. .++..+.+.+|++.|.++ ++-++-++++|+.|.+|++||++-..++.++..       .+
T Consensus       153 ~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~gles  231 (350)
T KOG0641|consen  153 AILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLES  231 (350)
T ss_pred             eEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCccc
Confidence            57777654 556666676 888999999999999886 344688999999999999999998888877642       23


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCC-EEEEEeCCCCEEEEecCCCccceee
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                      +.|.+++..|.|++|++|-.|....+||++.+..+ .+..|...|.++.|+++. ++++|+.|..|++-|+... ..+.+
T Consensus       232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd-la~el  310 (350)
T KOG0641|consen  232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD-LAHEL  310 (350)
T ss_pred             ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccc-hhhcC
Confidence            67899999999999999999999999999999888 888999999999998865 7889999999999998542 22222


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      +...    ...|...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus       311 ~~~v----v~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~  349 (350)
T KOG0641|consen  311 PIMV----VAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN  349 (350)
T ss_pred             ceEE----EEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence            1110    01245558889999998889999999999999764

>KOG0647|consensus

Probab=99.96  E-value=3.7e-27  Score=192.79  Aligned_cols=244  Identities=16%  Similarity=0.284  Sum_probs=191.1

Q ss_pred             CCCCceEEEEEeC-CCcEEEEecCCCcEEEEeCCC--ccE-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc
Q psy17902        188 KSYPPILALAVAN-NNELVASGDNNSNIKLWSSSL--EHL-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  263 (454)
                      .....|.+|+||| ...++++|+.||+|++|++..  ..+ .....|.++|.+++|+.+|..+++|+.|+.+++||+.++
T Consensus        25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~  104 (347)
T KOG0647|consen   25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG  104 (347)
T ss_pred             CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence            3566899999999 556777999999999999932  222 445679999999999999999999999999999999999


Q ss_pred             eeEEEeeccCCceeEEEeecCCC--EEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902        264 AYVETLFGHQSAITSLDILAKNR--VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd  341 (454)
                      + +..+..|..+|.++.|-+...  .|++|+.|.+|+.||.+...++.....+..+.++.. -..+++++..+..|.+|+
T Consensus       105 Q-~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv-~~pm~vVata~r~i~vyn  182 (347)
T KOG0647|consen  105 Q-VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADV-LYPMAVVATAERHIAVYN  182 (347)
T ss_pred             C-eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhc-cCceeEEEecCCcEEEEE
Confidence            5 556778999999999987665  899999999999999998888754444444444332 245678888999999999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC--ceeeEeccCC-------Cceeee
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK--RTLEFLQDIP-------LSGVIN  412 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~-------~~~~v~  412 (454)
                      +.++.........       .-.-.+.|+++.++....|.|+-.|.+-|..+..+  +.-.+++.+.       .-..|+
T Consensus       183 L~n~~te~k~~~S-------pLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVN  255 (347)
T KOG0647|consen  183 LENPPTEFKRIES-------PLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVN  255 (347)
T ss_pred             cCCCcchhhhhcC-------cccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEec
Confidence            9765433322111       11233899999999998899999999999999876  2223333321       124689


Q ss_pred             EEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        413 SLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       413 ~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +++|+|.-..|+++ |.||++.+||....
T Consensus       256 si~FhP~hgtlvTa-GsDGtf~FWDkdar  283 (347)
T KOG0647|consen  256 SIAFHPVHGTLVTA-GSDGTFSFWDKDAR  283 (347)
T ss_pred             ceEeecccceEEEe-cCCceEEEecchhh
Confidence            99999999999998 89999999997543

>KOG1332|consensus

Probab=99.96  E-value=6.8e-28  Score=191.32  Aligned_cols=247  Identities=18%  Similarity=0.302  Sum_probs=198.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~v~vw~  218 (454)
                      |.+.|..+...--|..|||++.|++|+|+...+.....   ......+|.++|..++|..  .|.+||+++.||.|.||.
T Consensus        10 H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~---ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen   10 HEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSK---LLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCce---eeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence            99999999988889999999999999999988765411   2222348999999999976  799999999999999999


Q ss_pred             CCC---ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCc---eeEEEeeccCCceeEEEeecC---C--
Q psy17902        219 SSL---EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQSAITSLDILAK---N--  285 (454)
Q Consensus       219 ~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~---~--  285 (454)
                      -.+   ........|...|++++|.|.  |-.|++++.||.|.|.+.+..   ........|.-.|++++|.|.   |  
T Consensus        87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~  166 (299)
T KOG1332|consen   87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSL  166 (299)
T ss_pred             cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccc
Confidence            833   345566789999999999985  568999999999999988754   122344679999999999986   3  


Q ss_pred             ---------CEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecC-----CCEEEEEeCCCCEEEEecCCCccc
Q psy17902        286 ---------RVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVN-----DQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       286 ---------~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                               +.|++|+.|..|+||+...+.-.   .+.+|..-+.-+.+.+     ...+++++.||++.||........
T Consensus       167 ~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~  246 (299)
T KOG1332|consen  167 VDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEP  246 (299)
T ss_pred             cccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCc
Confidence                     56999999999999999986433   5888998887777654     357999999999999988743333


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ......+.      .+..+..+.||+.|++|++++.|+.|.+|.-+..
T Consensus       247 wk~tll~~------f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~  288 (299)
T KOG1332|consen  247 WKKTLLEE------FPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVD  288 (299)
T ss_pred             cccccccc------CCcceEEEEEeccccEEEEecCCcEEEEEEeCCC
Confidence            33333332      2455999999999999999999999999986543

>KOG1332|consensus

Probab=99.96  E-value=9.2e-28  Score=190.58  Aligned_cols=244  Identities=17%  Similarity=0.294  Sum_probs=195.2

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CC--ccEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS--SL--EHLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~  261 (454)
                      .|...|..+...--|+.||+++.|++|+|+..  ++  ..+..+.+|.++|..++|..  -|.+|++++.||.|.||.-.
T Consensus         9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~   88 (299)
T KOG1332|consen    9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE   88 (299)
T ss_pred             hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecC
Confidence            57777777777778999999999999999998  33  56788999999999999975  68999999999999999988


Q ss_pred             Ccee--EEEeeccCCceeEEEeecCC--CEEEEeeCCCcEEEeeccCC-eE---EEEccccCCeEEEEecCC--------
Q psy17902        262 DRAY--VETLFGHQSAITSLDILAKN--RVISSGGTDKSVRVWKIQEE-SQ---LVFNGHSRGIDMTRRVND--------  325 (454)
Q Consensus       262 ~~~~--~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~-~~---~~~~~~~~~i~~~~~~~~--------  325 (454)
                      +++.  ......|...|++++|.|.+  -.|++++.||.|.|.+.+.. .-   .....|.-.++.+.+.+.        
T Consensus        89 ~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~  168 (299)
T KOG1332|consen   89 NGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVD  168 (299)
T ss_pred             CCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCccccc
Confidence            7743  34456799999999999874  68899999999999999875 21   256778888877776542        


Q ss_pred             -------CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC----CEEEEecCCCcEEEEEcC
Q psy17902        326 -------QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS----DLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       326 -------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~v~iwd~~  394 (454)
                             ..|++|+.|..|+||+..++.-.....       ...|..+|+.++|.|.-    .+||+++.||+|.||...
T Consensus       169 ~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~-------l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~  241 (299)
T KOG1332|consen  169 QGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERT-------LEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD  241 (299)
T ss_pred             cCcccccceeeccCCccceeeeecCCcchhhhhh-------hhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence                   469999999999999998762221111       22478899999999965    389999999999999876


Q ss_pred             CC-cee--eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        395 PK-RTL--EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       395 ~~-~~~--~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      .. ...  ..+.  +....+..++||+.|..|+++ +.|+.|.+|.-...
T Consensus       242 ~e~e~wk~tll~--~f~~~~w~vSWS~sGn~LaVs-~GdNkvtlwke~~~  288 (299)
T KOG1332|consen  242 EEYEPWKKTLLE--EFPDVVWRVSWSLSGNILAVS-GGDNKVTLWKENVD  288 (299)
T ss_pred             CccCcccccccc--cCCcceEEEEEeccccEEEEe-cCCcEEEEEEeCCC
Confidence            32 111  1222  255779999999999999999 78999999986544

>KOG0289|consensus

Probab=99.96  E-value=3.9e-27  Score=201.64  Aligned_cols=238  Identities=21%  Similarity=0.301  Sum_probs=207.0

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      ...+.++...+....+++|+.|..+.++|. ..+.+..+++|...|+.+.|+|+...+++++.|..|+||..........
T Consensus       219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~  298 (506)
T KOG0289|consen  219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTS  298 (506)
T ss_pred             CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccc
Confidence            346888888888789999999999999999 7788899999999999999999999999999999999999988887778


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcccc---CCeEEEEec-CCCEEEEEeCCCCEEEEecCC
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHS---RGIDMTRRV-NDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      ...|..+|+.+..+|.|.||++++.|++..+.|++++.++....+.   -.+++..++ ++..|.+|+.||.|+|||+.+
T Consensus       299 ~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks  378 (506)
T KOG0289|consen  299 SRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS  378 (506)
T ss_pred             cccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC
Confidence            8899999999999999999999999999999999999988444442   335666665 455677899999999999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                      +..+..++.         |.++|..++|+.+|.+||+++.|+.|++||++..+.+.++... ....|.+++|.+.|.+|+
T Consensus       379 ~~~~a~Fpg---------ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~-~~~~v~s~~fD~SGt~L~  448 (506)
T KOG0289|consen  379 QTNVAKFPG---------HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLD-EKKEVNSLSFDQSGTYLG  448 (506)
T ss_pred             ccccccCCC---------CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecc-ccccceeEEEcCCCCeEE
Confidence            888877765         5566999999999999999999999999999988777777653 334799999999999999


Q ss_pred             EEecCCCceeeeee
Q psy17902        425 AGIGTEHRFGRWKT  438 (454)
Q Consensus       425 ~~~~~d~~i~~W~~  438 (454)
                      ++ |.+-.|++.+.
T Consensus       449 ~~-g~~l~Vy~~~k  461 (506)
T KOG0289|consen  449 IA-GSDLQVYICKK  461 (506)
T ss_pred             ee-cceeEEEEEec
Confidence            99 88888877663

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.96  E-value=1.9e-25  Score=201.72  Aligned_cols=275  Identities=13%  Similarity=0.091  Sum_probs=200.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      ++.+++++.||.|.+||+.+++....+..      + ..+.+++|+|++..+ ++++.++.|++||. ++..+..+..+.
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~------~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~   73 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRTFPV------G-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP   73 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEEEEC------C-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC
Confidence            35788999999999999988876655441      2 246779999999876 56677899999999 455555555443


Q ss_pred             CCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC-cEEEeeccCCeEEE
Q psy17902        232 APITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK-SVRVWKIQEESQLV  309 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~  309 (454)
                      . +..++|+|+++.++++ +.++.|++||+.+.+.+..+. +...+.+++|+|++.++++++.++ .+.+||..++....
T Consensus        74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~  151 (300)
T TIGR03866        74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVD  151 (300)
T ss_pred             C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence            3 5678999999877655 568999999999888776664 334568899999999999888765 46778998876653


Q ss_pred             E-ccccCCeEEEEecCCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE-ecCCC
Q psy17902        310 F-NGHSRGIDMTRRVNDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS-GSYDG  386 (454)
Q Consensus       310 ~-~~~~~~i~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg  386 (454)
                      . ..........+.+++..|+++ ..++.|++||+.+++.+..+......  ..........++|+|+++++++ .+.++
T Consensus       152 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~s~dg~~~~~~~~~~~  229 (300)
T TIGR03866       152 NVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPG--VHPEAVQPVGIKLTKDGKTAFVALGPAN  229 (300)
T ss_pred             EEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccc--cccccCCccceEECCCCCEEEEEcCCCC
Confidence            2 222223333445566666554 46899999999998777665432110  0001112456889999997544 45567


Q ss_pred             cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        387 CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       387 ~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .|.+||+.+++....+.   +...+.+++|+|+|++|+++.+.++.|.+|+...+.
T Consensus       230 ~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~  282 (300)
T TIGR03866       230 RVAVVDAKTYEVLDYLL---VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALK  282 (300)
T ss_pred             eEEEEECCCCcEEEEEE---eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCc
Confidence            89999999887766553   345789999999999999886789999999988764

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG2106|consensus

Probab=99.96  E-value=2.5e-25  Score=194.12  Aligned_cols=279  Identities=18%  Similarity=0.263  Sum_probs=216.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      .+..|..+.|+|.+..|+..+..|.+.+|+...+............  ....|.|++|.++|. +++|..+|.|.||+. 
T Consensus       199 sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~--ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~  275 (626)
T KOG2106|consen  199 SNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKR--EKKFVLCVTFLENGD-VITGDSGGNILIWSKG  275 (626)
T ss_pred             ccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccc--cceEEEEEEEcCCCC-EEeecCCceEEEEeCC
Confidence            4566889999997666665566799999999987766554332222  226899999999997 889999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc------------------------------------
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR------------------------------------  263 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~------------------------------------  263 (454)
                      .....+....|.+.|.+++...+|. |++|+.|..|..||-.-.                                    
T Consensus       276 ~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~G  354 (626)
T KOG2106|consen  276 TNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQG  354 (626)
T ss_pred             CceEEeEeeecCCceEEEEEecCcc-EeecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEe
Confidence            4444555569999999999998886 555999999999984210                                    


Q ss_pred             ----eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902        264 ----AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       264 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                          .......+|......++.+|+.+.+++++.|+.+++|+  ..+..-...-..+..++.+.+.+.++.|+..|...+
T Consensus       355 t~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~~~d~~~~~~fhpsg~va~Gt~~G~w~V  432 (626)
T KOG2106|consen  355 TLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKIIEDPAECADFHPSGVVAVGTATGRWFV  432 (626)
T ss_pred             eecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEEecCceeEeeccCcceEEEeeccceEEE
Confidence                00112246888889999999999999999999999999  334443334455667788877779999999999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcC
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      .|..+...+.....          ..+++++.|+|+|.+||+|+.|+.|+||.+..+ +.+..+.. -+..+|+.|.||+
T Consensus       433 ~d~e~~~lv~~~~d----------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k-~~gs~ithLDwS~  501 (626)
T KOG2106|consen  433 LDTETQDLVTIHTD----------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGK-CSGSPITHLDWSS  501 (626)
T ss_pred             EecccceeEEEEec----------CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeee-ecCceeEEeeecC
Confidence            99988555444332          233999999999999999999999999999765 44444433 2458999999999


Q ss_pred             CCCEEEEEecCCCceeeee
Q psy17902        419 DHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~W~  437 (454)
                      |+++|.+- +.|-.|..|.
T Consensus       502 Ds~~~~~~-S~d~eiLyW~  519 (626)
T KOG2106|consen  502 DSQFLVSN-SGDYEILYWK  519 (626)
T ss_pred             CCceEEec-cCceEEEEEc
Confidence            99999988 7788999994

>KOG0270|consensus

Probab=99.96  E-value=6e-27  Score=201.21  Aligned_cols=282  Identities=17%  Similarity=0.253  Sum_probs=203.3

Q ss_pred             EEEEEcCCCCEEEEEeCC---C--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-------CCcEEEEecCCCc
Q psy17902        146 TCIAVTSDSKHVYSACKD---G--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-------NNELVASGDNNSN  213 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~dg~  213 (454)
                      --+..-|+.++|+++-.+   .  .|+||+-........-.+     --.....|++|..       .|+|+|.|+.+..
T Consensus       129 de~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~nlYvHHD~-----ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~  203 (463)
T KOG0270|consen  129 DEEQVKPSDNLILCARNEDDVSYLEVYVYNEEEENLYVHHDF-----ILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPE  203 (463)
T ss_pred             ccceeccCCcEEEEeeccCCceEEEEEEEcCCCcceeEecce-----eccCcchhhhhhhcCCCCCCCcceEEEeccCce
Confidence            345666777777776543   2  345554433222111110     0122345666642       3689999999999


Q ss_pred             EEEEeCC----CccEEe------------------ecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        214 IKLWSSS----LEHLHT------------------FTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       214 v~vw~~~----~~~~~~------------------~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      |.|||+.    -.+..+                  -.+|+..|.+++|+.. .+.|++||.|.+|.+||+.++++..++.
T Consensus       204 IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~  283 (463)
T KOG0270|consen  204 IEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSIT  283 (463)
T ss_pred             eEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehh
Confidence            9999972    111111                  1368889999999875 4689999999999999999999999999


Q ss_pred             ccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCC-
Q psy17902        271 GHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKK-  345 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~-  345 (454)
                      .|...|.++.|+|.. .+|++|+.|++|.+.|++..... ......+.+..+.|.  ....+++++.||+|+-+|++.. 
T Consensus       284 ~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~  363 (463)
T KOG0270|consen  284 HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPG  363 (463)
T ss_pred             hcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCC
Confidence            899999999999875 78999999999999999964333 222334455545544  3567888899999999999886 


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                      +++.++..         |...|+++++++.-. +|++++.|+.|++|++....+-.........+...|+++.|+-.+++
T Consensus       364 ~~vwt~~A---------Hd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~l  434 (463)
T KOG0270|consen  364 KPVWTLKA---------HDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTL  434 (463)
T ss_pred             CceeEEEe---------ccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEE
Confidence            78888775         455699999988554 89999999999999997654322222111345578889999988877


Q ss_pred             EEecCCCceeeeeeeCC
Q psy17902        425 AGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       425 ~~~~~d~~i~~W~~~~~  441 (454)
                      +.+|..+.+++|+..+.
T Consensus       435 a~GG~k~~~~vwd~~~~  451 (463)
T KOG0270|consen  435 AFGGEKAVLRVWDIFTN  451 (463)
T ss_pred             EecCccceEEEeecccC
Confidence            77688889999998664

>KOG0646|consensus

Probab=99.96  E-value=5.5e-27  Score=202.67  Aligned_cols=275  Identities=19%  Similarity=0.243  Sum_probs=214.5

Q ss_pred             CEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        155 KHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       155 ~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      .+++++.. ...|.+|.+..........      --.++|.+++-+|+|.+|+.|+..|.|++|.+ ++..+..+..|-.
T Consensus        51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~------v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ  124 (476)
T KOG0646|consen   51 EYLLSAQLKRPLLHVWEILKKDQVVQYI------VLPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQ  124 (476)
T ss_pred             hheeeecccCccccccccCchhhhhhhc------ccccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhcc
Confidence            46666554 3578899887655544222      24568999999999999999999999999999 8888889999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CceeEEEeeccCCceeEEEeecCC--CEEEEeeCCCcEEEee
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIE---------DRAYVETLFGHQSAITSLDILAKN--RVISSGGTDKSVRVWK  301 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d  301 (454)
                      .|+|+.|+.|+.+|++||.||.|.+|.+.         +-+++..+..|.-+|+.+...+.|  .+|+|++.|.++++||
T Consensus       125 ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wd  204 (476)
T KOG0646|consen  125 SITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWD  204 (476)
T ss_pred             ceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEE
Confidence            99999999999999999999999999873         345678888999999999987654  6899999999999999


Q ss_pred             ccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcccee---ee----cccCCCCCCCCCC--cEEEEE
Q psy17902        302 IQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHT---IP----VAHGYDSSSSEPN--WITSVA  371 (454)
Q Consensus       302 ~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~----~~~~~~~~~~~~~--~i~~~~  371 (454)
                      +..+..+.....+..+.++... .+..+++|+.+|.|.+.++........   ..    .........+|.+  .|+|++
T Consensus       205 lS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLa  284 (476)
T KOG0646|consen  205 LSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLA  284 (476)
T ss_pred             eccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEE
Confidence            9999888666666666666655 466788999999999998865432111   00    0011112234555  799999


Q ss_pred             EecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      ++-||.+|++|+.||.|.|||+.+.++++++..  ..++|+.+.+.|--+..+.+.+....+-.|.
T Consensus       285 is~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~--~kgpVtnL~i~~~~~~~~l~~~~~ps~~~~~  348 (476)
T KOG0646|consen  285 ISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQT--SKGPVTNLQINPLERGIILFEHKQPSLPNPH  348 (476)
T ss_pred             EecCccEEEeeCCCCCEEEEecchHHHHHHHhh--hccccceeEeeccccceecccccCccCCchH
Confidence            999999999999999999999999999888875  6789999999776555555434444444443

>KOG4283|consensus

Probab=99.95  E-value=3.1e-26  Score=186.79  Aligned_cols=292  Identities=15%  Similarity=0.247  Sum_probs=219.6

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeccc---------CCcccCCCCCCceEEEEEeC-CCcEEEEec
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSS---------PFVKTDRKSYPPILALAVAN-NNELVASGD  209 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~  209 (454)
                      |.+.|+++.+.+ .|+++++|+.||.|.+||+++.......         .......+|.-.|..+.|-| |..++.+++
T Consensus        42 HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssS  121 (397)
T KOG4283|consen   42 HGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSS  121 (397)
T ss_pred             CCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeeccc
Confidence            999999999988 5899999999999999999875421100         01122346788899999988 566888999


Q ss_pred             CCCcEEEEeCCCccEEeecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        210 NNSNIKLWSSSLEHLHTFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       210 ~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      .|.+++|||.++-+........+.|++-+|+|-   ..++++|..+-.|++.|+.+|.+.+++.+|...|.++.|+|...
T Consensus       122 FDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e  201 (397)
T KOG4283|consen  122 FDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSE  201 (397)
T ss_pred             ccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCce
Confidence            999999999955444444446778888899883   34777888899999999999999999999999999999999875


Q ss_pred             -EEEEeeCCCcEEEeeccCC-eEE-E--------------EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        287 -VISSGGTDKSVRVWKIQEE-SQL-V--------------FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       287 -~l~~~~~dg~i~i~d~~~~-~~~-~--------------~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                       .|++|+.||.|++||++.. .+. .              ...|.+.+..+++. ++.++++++.|..+++|+..++...
T Consensus       202 ~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~nt  281 (397)
T KOG4283|consen  202 WVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGRNT  281 (397)
T ss_pred             eEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCccc
Confidence             5789999999999999853 121 1              23345555555554 6778999999999999999887543


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ..-......... .+.. +. +. +-+...++---.++.+.++++-.+..++.+..  |...|.+.+|-|+-+...++ .
T Consensus       282 l~~~g~~~~n~~-~~~~-~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~--h~k~i~c~~~~~~fq~~~tg-~  354 (397)
T KOG4283|consen  282 LREFGPIIHNQT-TSFA-VH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLST--HLKRINCAAYRPDFEQCFTG-D  354 (397)
T ss_pred             cccccccccccc-ccce-EE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeec--ccceeeEEeecCchhhhhcc-c
Confidence            322111111000 0110 11 22 33444455555568899999999999999887  67789999999999999988 8


Q ss_pred             CCCceeeeeee
Q psy17902        429 TEHRFGRWKTI  439 (454)
Q Consensus       429 ~d~~i~~W~~~  439 (454)
                      .|+.|..|-..
T Consensus       355 ~d~ni~~w~p~  365 (397)
T KOG4283|consen  355 MNGNIYMWSPA  365 (397)
T ss_pred             cCCcccccccc
Confidence            99999999763

>KOG0646|consensus

Probab=99.95  E-value=1.2e-26  Score=200.52  Aligned_cols=257  Identities=21%  Similarity=0.289  Sum_probs=204.4

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEeCC-CccEEeecccCCCeEEEEEcC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWSSS-LEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~~-~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      ..+.+||+.++.....+....     ...-.++..- .+.+++++.. -..|.+|.+. ........--+++|.+++-+|
T Consensus        18 ~~~~~~dl~TGt~~~~ykg~~-----~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n   91 (476)
T KOG0646|consen   18 INCIVWDLRTGTSLLQYKGSY-----LAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSN   91 (476)
T ss_pred             cceeEEecCCCceeEEecCcc-----cccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecCC
Confidence            569999999998777665311     1111111111 2356666654 4588999983 333333445678999999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---------CeEE-EEc
Q psy17902        242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---------ESQL-VFN  311 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~-~~~  311 (454)
                      +|.+|+.|+..|.|++|.+.+|..+..+.+|-..|+|+.|+.|+.+|++|+.||.|.+|.+..         ..+. .+.
T Consensus        92 ~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~  171 (476)
T KOG0646|consen   92 LGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFS  171 (476)
T ss_pred             CceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeec
Confidence            999999999999999999999999999999999999999999999999999999999998742         1222 788


Q ss_pred             cccCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        312 GHSRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       312 ~~~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                      .|.-+|+.+....+   .+++++|.|.++++||+..+..+.++...          ..+.+++.+|..+.+++|+.+|.|
T Consensus       172 ~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp----------~si~av~lDpae~~~yiGt~~G~I  241 (476)
T KOG0646|consen  172 DHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP----------SSIKAVALDPAERVVYIGTEEGKI  241 (476)
T ss_pred             cCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC----------CcceeEEEcccccEEEecCCcceE
Confidence            88888888777654   58999999999999999999888887653          339999999999999999999999


Q ss_pred             EEEEcCCCc----------------eeeEeccCCCce--eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        389 KLWKITPKR----------------TLEFLQDIPLSG--VINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       389 ~iwd~~~~~----------------~~~~~~~~~~~~--~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .+.++..-.                .+..+.+  |.+  .|+|++.+-||..|++| +.||.+++|+..
T Consensus       242 ~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~G--h~~~~~ITcLais~DgtlLlSG-d~dg~VcvWdi~  307 (476)
T KOG0646|consen  242 FQNLLFKLSGQSAGVNQKGRHEENTQINVLVG--HENESAITCLAISTDGTLLLSG-DEDGKVCVWDIY  307 (476)
T ss_pred             EeeehhcCCcccccccccccccccceeeeecc--ccCCcceeEEEEecCccEEEee-CCCCCEEEEecc
Confidence            998875432                2333444  555  89999999999999999 999999999974

>KOG0301|consensus

Probab=99.95  E-value=1.4e-26  Score=209.29  Aligned_cols=246  Identities=24%  Similarity=0.381  Sum_probs=207.2

Q ss_pred             hhhccCceeEeEeccCCCCCCeEE-EEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC
Q psy17902        124 DRLANATVVCTKFNGKPHRASITC-IAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN  201 (454)
Q Consensus       124 ~~~~~~~~~~~~~~~~~h~~~V~~-~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  201 (454)
                      ..........+.+.+  |.+.|.+ ++|-+ ++-.|++|+.|++|.+|..........+.      +|...|++++...+
T Consensus        41 ~~~~~~~l~~~~~~~--~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~Lk------gH~snVC~ls~~~~  112 (745)
T KOG0301|consen   41 AKKGKQYLETHAFEG--PKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLK------GHKSNVCSLSIGED  112 (745)
T ss_pred             eccCcccccceeccc--CcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhh------ccccceeeeecCCc
Confidence            333344445567778  9999888 88876 45569999999999999999888777766      79999999998888


Q ss_pred             CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902        202 NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       202 ~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  281 (454)
                      +. |++|+.|.++++|.. ++....+.+|+..|+++...|.+ .++|||.|.+|++|.-  ++.+.+|.+|...|+++++
T Consensus       113 ~~-~iSgSWD~TakvW~~-~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~v  187 (745)
T KOG0301|consen  113 GT-LISGSWDSTAKVWRI-GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAV  187 (745)
T ss_pred             Cc-eEecccccceEEecc-hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccC--CchhhhhccchhheeeeEE
Confidence            87 999999999999985 34445589999999999999887 8999999999999985  7788999999999999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      .+++ .|++++.||.|+.|++.......+.+|..-+.++. ..+++.+++++.|++++||+..  .+.+.+..+..    
T Consensus       188 l~~~-~flScsNDg~Ir~w~~~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPtt----  260 (745)
T KOG0301|consen  188 LDDS-HFLSCSNDGSIRLWDLDGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTT----  260 (745)
T ss_pred             ecCC-CeEeecCCceEEEEeccCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCcc----
Confidence            9765 46689999999999997666669999999998888 6788999999999999999976  56666654332    


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                           .|+++.+-++|+ |++|++||.|+||....
T Consensus       261 -----siWsa~~L~NgD-Ivvg~SDG~VrVfT~~k  289 (745)
T KOG0301|consen  261 -----SIWSAKVLLNGD-IVVGGSDGRVRVFTVDK  289 (745)
T ss_pred             -----ceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence                 299999999886 56788899999998763

>KOG0308|consensus

Probab=99.95  E-value=5.7e-27  Score=210.30  Aligned_cols=309  Identities=20%  Similarity=0.317  Sum_probs=234.5

Q ss_pred             cCcEeeeehhhhccC--ceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCC
Q psy17902        115 EGKLRVNIADRLANA--TVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSY  190 (454)
Q Consensus       115 ~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~  190 (454)
                      +|.+..|-.......  ......+..  |.+.|+.++...+++.|++++.|-+|++|+.....  .+..+      ..|.
T Consensus        46 Dg~i~~W~~~~d~~~~s~~~~asme~--HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~sti------r~H~  117 (735)
T KOG0308|consen   46 DGIIRLWSVTQDSNEPSTPYIASMEH--HSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTI------RTHK  117 (735)
T ss_pred             CceEEEeccccccCCcccchhhhhhh--hHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhh------hccc
Confidence            455555554443332  224667777  99999999999999999999999999999988763  22233      3699


Q ss_pred             CceEEEEE-eCCCcEEEEecCCCcEEEEeCCCc---cE--------Eeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy17902        191 PPILALAV-ANNNELVASGDNNSNIKLWSSSLE---HL--------HTFT-GHKAPITGLAISFECDTLYSSSNDRSIKV  257 (454)
Q Consensus       191 ~~v~~~~~-~~~~~~l~~~~~dg~v~vw~~~~~---~~--------~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  257 (454)
                      ..|.|+++ .++..++|+|+.|+.|.+||++..   .+        ..+. ++..+|++++.++.|..|++|+..+.+++
T Consensus       118 DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~  197 (735)
T KOG0308|consen  118 DYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRL  197 (735)
T ss_pred             chheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEE
Confidence            99999999 888999999999999999999422   22        2223 78899999999999999999999999999


Q ss_pred             EeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCC
Q psy17902        258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDG  335 (454)
Q Consensus       258 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg  335 (454)
                      ||.++.+.+..+.+|...|.++..+++|+.+++++.||+|++||+....++ .+..|...+..+...+ -..+++|+.||
T Consensus       198 wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~  277 (735)
T KOG0308|consen  198 WDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDG  277 (735)
T ss_pred             eccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCC
Confidence            999999999999999999999999999999999999999999999998888 7888888876666554 46899999999


Q ss_pred             CEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec-----------
Q psy17902        336 TLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-----------  403 (454)
Q Consensus       336 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----------  403 (454)
                      .|..-|+++.. ....+..          ..+|..+..+...+-+-+++.|+.|+-|.......+....           
T Consensus       278 ~i~~Tdl~n~~~~tlick~----------daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~  347 (735)
T KOG0308|consen  278 NIYRTDLRNPAKSTLICKE----------DAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNN  347 (735)
T ss_pred             cEEecccCCchhheEeecC----------CCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCC
Confidence            99999998852 2222221          1225555555433444666777788888654221111000           


Q ss_pred             -----------cCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        404 -----------DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       404 -----------~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                                 ..+.+.+|...+.-.|.+++++- ...|.+.+||.....
T Consensus       348 ~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTk-Da~gnv~lwDIl~~~  396 (735)
T KOG0308|consen  348 HSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTK-DAKGNVALWDILACV  396 (735)
T ss_pred             ccccccCCCceeccCchhhhhhhhhcCcceEeee-cCCCCEEEEEeeeee
Confidence                       01122335555666788899988 889999999986543

>KOG1273|consensus

Probab=99.95  E-value=5.5e-26  Score=187.03  Aligned_cols=279  Identities=13%  Similarity=0.155  Sum_probs=207.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCcc
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEH  223 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~  223 (454)
                      -.|+.|++.|.+||+|+.||.|.|||+.+...-..+.      +|..+|++++||++|+.|++++.|..|.+||+ .+.+
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~ls------aH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~   99 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLS------AHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSP   99 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhh------ccccceeEEEecCCCCEeeeecCCceeEEEeccCCCc
Confidence            7899999999999999999999999999987555554      79999999999999999999999999999999 7777


Q ss_pred             EEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeecc----CCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        224 LHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGH----QSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                      ++.+. ...+|+.+.|+|... .+++.-.+..-.+-++..+.....-...    ...-.+..|.+.|++|++|...|.+.
T Consensus       100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkll  178 (405)
T KOG1273|consen  100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLL  178 (405)
T ss_pred             eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEE
Confidence            77776 678999999999543 3333334444555555543221111111    11123346888999999999999999


Q ss_pred             EeeccCCeEE-EEcccc-CCeEEEEec-CCCEEEEEeCCCCEEEEecCCC-------c--cceeeecccCCCCCCCCCCc
Q psy17902        299 VWKIQEESQL-VFNGHS-RGIDMTRRV-NDQQFITCGEDGTLSLWSILKK-------V--PTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       299 i~d~~~~~~~-~~~~~~-~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-------~--~~~~~~~~~~~~~~~~~~~~  366 (454)
                      +++..+.+++ .+.... ..|..+.++ .+..|++.+.|..|+.|++..-       .  +.+.+....       ....
T Consensus       179 v~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvV-------Nk~~  251 (405)
T KOG1273|consen  179 VYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVV-------NKLQ  251 (405)
T ss_pred             EEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHH-------hhhh
Confidence            9999998877 333333 455555544 6889999999999999998621       1  111111100       0112


Q ss_pred             EEEEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        367 ITSVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      -.+++||.+|.|+++|+. -..++||.-..|.+++.+.+. .+.....+.|+|-...|++-  ..|.+++|....
T Consensus       252 Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~-kgE~l~DV~whp~rp~i~si--~sg~v~iw~~~~  323 (405)
T KOG1273|consen  252 WKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGT-KGEELLDVNWHPVRPIIASI--ASGVVYIWAVVQ  323 (405)
T ss_pred             hhheeecCCccEEEeccccceeEEEEecCCcceeeeecCC-chhheeecccccceeeeeec--cCCceEEEEeec
Confidence            467889999999888874 456999999999999999872 33557889999988777766  789999998754

>KOG0264|consensus

Probab=99.95  E-value=9.4e-27  Score=200.77  Aligned_cols=243  Identities=16%  Similarity=0.284  Sum_probs=194.7

Q ss_pred             CCCCceEEEEEeCCC-cEEEEecCCCcEEEEeCCC-----------ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCc
Q psy17902        188 KSYPPILALAVANNN-ELVASGDNNSNIKLWSSSL-----------EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRS  254 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~~~-----------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~  254 (454)
                      .|.+.|+.+.+-|.. ..+|+++..+.|.|||.+.           .+-..+.+|...-++++|++. ..+|++++.|++
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~  201 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT  201 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence            477788888888854 5677778889999999721           112377899988889999985 458999999999


Q ss_pred             EEEEeCCCce-------eEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCC--eEE-EEccccCCeEEEEec
Q psy17902        255 IKVWNIEDRA-------YVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEE--SQL-VFNGHSRGIDMTRRV  323 (454)
Q Consensus       255 i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~--~~~-~~~~~~~~i~~~~~~  323 (454)
                      |++||+....       ....+.+|...|..++|++-. .+|++++.|+.+.|||+|++  +.. ...+|...+.|+.|.
T Consensus       202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn  281 (422)
T KOG0264|consen  202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN  281 (422)
T ss_pred             EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence            9999997543       235677999999999999865 78899999999999999953  322 678899999999987


Q ss_pred             C--CCEEEEEeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCcee
Q psy17902        324 N--DQQFITCGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       324 ~--~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~  399 (454)
                      +  +..|++|+.|++|.+||+++.. +++++.         .|...|.++.|+|+.. +||+++.|+.+.|||+..-...
T Consensus       282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e---------~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~e  352 (422)
T KOG0264|consen  282 PFNEFILATGSADKTVALWDLRNLNKPLHTFE---------GHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEE  352 (422)
T ss_pred             CCCCceEEeccCCCcEEEeechhcccCceecc---------CCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccc
Confidence            5  6688899999999999998853 444444         3566699999999765 8999999999999999642111


Q ss_pred             ------------eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        400 ------------EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       400 ------------~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                                  -.+....|.+.|+.+.|+|+..+++++...|+.+.||...
T Consensus       353 q~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  353 QSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             cChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                        1122234888999999999999999999999999999875

>KOG0264|consensus

Probab=99.95  E-value=1.9e-26  Score=198.94  Aligned_cols=255  Identities=15%  Similarity=0.254  Sum_probs=198.0

Q ss_pred             CCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceeccc----CCcccCCCCCCceEEEEEeCC-CcEEEEecCCCc
Q psy17902        140 PHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSS----PFVKTDRKSYPPILALAVANN-NELVASGDNNSN  213 (454)
Q Consensus       140 ~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~  213 (454)
                      .|.+.|+.+.+-|+. .++|+++..+.|.|||..........    .......+|...-++++|++. .-.|++|+.|+.
T Consensus       122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~  201 (422)
T KOG0264|consen  122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT  201 (422)
T ss_pred             cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence            399999999999965 56777888899999998764433221    112223467666788999985 347899999999


Q ss_pred             EEEEeCCC--------ccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC--CceeEEEeeccCCceeEEEee
Q psy17902        214 IKLWSSSL--------EHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIE--DRAYVETLFGHQSAITSLDIL  282 (454)
Q Consensus       214 v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~v~~~~~~  282 (454)
                      |++||++.        .+...+.+|...|..++|++ +..+|++++.|+.+.|||++  +.+......+|.++|+|++|+
T Consensus       202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn  281 (422)
T KOG0264|consen  202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN  281 (422)
T ss_pred             EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence            99999922        23467789999999999998 45788899999999999999  455566677899999999999


Q ss_pred             cCC-CEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccC-
Q psy17902        283 AKN-RVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHG-  356 (454)
Q Consensus       283 ~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-  356 (454)
                      |-+ .+||+|+.|++|.+||+|+....  .+.+|...|..+.|++  ...|++++.|+.+.|||+..-...+....... 
T Consensus       282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dg  361 (422)
T KOG0264|consen  282 PFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDG  361 (422)
T ss_pred             CCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccC
Confidence            965 78899999999999999986544  8899999999998876  45788999999999999965332221000000 


Q ss_pred             ----CCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcC
Q psy17902        357 ----YDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKIT  394 (454)
Q Consensus       357 ----~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~  394 (454)
                          .-.+.+|...|..+.|+|+.. .|++.+.|+.+.||.+.
T Consensus       362 ppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s  404 (422)
T KOG0264|consen  362 PPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA  404 (422)
T ss_pred             CcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence                001124777799999999887 67888999999999986

>KOG2048|consensus

Probab=99.95  E-value=5.2e-25  Score=198.81  Aligned_cols=287  Identities=17%  Similarity=0.229  Sum_probs=229.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      .++.+.-  -...|.||||+...+.||.+-.+|.|-||++...=.....-.    .+....|.+++|++.+ .|++.+.+
T Consensus        17 rcrf~d~--~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~----g~~drsIE~L~W~e~~-RLFS~g~s   89 (691)
T KOG2048|consen   17 RCRFVDY--KPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIH----GPEDRSIESLAWAEGG-RLFSSGLS   89 (691)
T ss_pred             EEEEEee--eccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEe----cCCCCceeeEEEccCC-eEEeecCC
Confidence            3455555  667899999999999999999999999999987432221111    1456689999999555 57788889


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE--EEeeccCCceeEEEeecCCCEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV--ETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      |.|.-||+ +.++...+....+.|++++.+|.+..++.|+.||.+..++...+...  ..+....+.|.+++|+|++..|
T Consensus        90 g~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i  169 (691)
T KOG2048|consen   90 GSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKI  169 (691)
T ss_pred             ceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEE
Confidence            99999999 88999999999999999999999999999999998888888777544  3344456899999999999999


Q ss_pred             EEeeCCCcEEEeeccCCeEEE-----EccccC----CeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQLV-----FNGHSR----GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~-----~~~~~~----~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                      ++|+.||.|++||..++....     +.+-..    .+..+.+..++.+++|.+.|+|.+||...+..++.+..+.    
T Consensus       170 ~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~----  245 (691)
T KOG2048|consen  170 AGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHD----  245 (691)
T ss_pred             EecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhh----
Confidence            999999999999999887763     222222    2344556688999999999999999999998888876543    


Q ss_pred             CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce--eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT--LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       360 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                           ..|.+++..++++++++++.|+.|..|...++..  +.......|...|.+++..++  .|++| |.|..+.+-.
T Consensus       246 -----adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sg-G~d~~l~i~~  317 (691)
T KOG2048|consen  246 -----ADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISG-GRDFTLAICS  317 (691)
T ss_pred             -----cceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEec-ceeeEEEEcc
Confidence                 3499999999999999999999999998877633  222222347778999999877  66666 8888876654

>KOG4328|consensus

Probab=99.95  E-value=6e-26  Score=195.75  Aligned_cols=297  Identities=18%  Similarity=0.197  Sum_probs=226.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEe
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDS--KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASG  208 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~  208 (454)
                      ....++-  |.+.|++++|+|..  +++|+|..-|.|-+||+.+.....  ........|..+|.+|.|+|. -..+++.
T Consensus       178 ~~~v~kv--~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~--d~v~~f~~hs~~Vs~l~F~P~n~s~i~ss  253 (498)
T KOG4328|consen  178 ILNVAKV--TDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK--DGVYLFTPHSGPVSGLKFSPANTSQIYSS  253 (498)
T ss_pred             ecceeEe--cccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc--CceEEeccCCccccceEecCCChhheeee
Confidence            3445555  99999999999964  588899999999999996322211  111222368899999999995 4578899


Q ss_pred             cCCCcEEEEeCCCcc---EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-EEEeeccCCceeEEEeecC
Q psy17902        209 DNNSNIKLWSSSLEH---LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-VETLFGHQSAITSLDILAK  284 (454)
Q Consensus       209 ~~dg~v~vw~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~  284 (454)
                      +.||+|++-|+.+..   +..+......+.++.|+.+...++.+..=|...+||++++.. ...+.-|...|++|+++|-
T Consensus       254 SyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~  333 (498)
T KOG4328|consen  254 SYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPV  333 (498)
T ss_pred             ccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCC
Confidence            999999999995443   333433455677888988888888888888999999998765 5556678889999999997


Q ss_pred             C-CEEEEeeCCCcEEEeeccCCe-----EEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecC----CCccceeeec
Q psy17902        285 N-RVISSGGTDKSVRVWKIQEES-----QLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSIL----KKVPTHTIPV  353 (454)
Q Consensus       285 ~-~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~  353 (454)
                      . .+|+|++.|++++|||++.-.     .+....|...|..+.|++ +..|++.+.|..|+|||..    ...+...+..
T Consensus       334 ~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~H  413 (498)
T KOG4328|consen  334 CPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPH  413 (498)
T ss_pred             CchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeec
Confidence            6 678999999999999998521     246678888898887764 5679999999999999983    3444555443


Q ss_pred             ccCCCCCCCCCCc--EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeE-EEEcCCCCEEEEEecCC
Q psy17902        354 AHGYDSSSSEPNW--ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS-LVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       354 ~~~~~~~~~~~~~--i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~~~~~~d  430 (454)
                      .+.      +..|  .....|.|+..+|++|..-..|-|||-..++.+..+.... ...|.+ ..|+|-+..+++|++..
T Consensus       414 n~~------t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~-~~tI~~vn~~HP~~~~~~aG~~s~  486 (498)
T KOG4328|consen  414 NNR------TGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPE-SSTIPSVNEFHPMRDTLAAGGNSS  486 (498)
T ss_pred             cCc------ccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCcc-ccccccceeecccccceeccCCcc
Confidence            222      1222  3456799999999999999999999998888787776532 333444 58999998888888889


Q ss_pred             Cceeeeeee
Q psy17902        431 HRFGRWKTI  439 (454)
Q Consensus       431 ~~i~~W~~~  439 (454)
                      |.|++|-..
T Consensus       487 Gki~vft~k  495 (498)
T KOG4328|consen  487 GKIYVFTNK  495 (498)
T ss_pred             ceEEEEecC
Confidence            999988643

>KOG0269|consensus

Probab=99.95  E-value=1.1e-26  Score=212.56  Aligned_cols=281  Identities=13%  Similarity=0.231  Sum_probs=215.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeCC-
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSSS-  220 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~-  220 (454)
                      ...+|+.+++-+.|+.++. ..+.||.+............ .........+..+.|.. +.++||+++.+|.|.+||++ 
T Consensus        41 ~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk  119 (839)
T KOG0269|consen   41 KANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK  119 (839)
T ss_pred             ccceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence            3567788888888888876 47788876653322211111 11111223455677764 46799999999999999993 


Q ss_pred             ---CccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC-CCEEEEeeCCC
Q psy17902        221 ---LEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK-NRVISSGGTDK  295 (454)
Q Consensus       221 ---~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg  295 (454)
                         ...+..|..|...++++.|++. ..+|++|+.||+|++||++..+...++.+....|+.+.|+|. ++.|+++...|
T Consensus       120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG  199 (839)
T KOG0269|consen  120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG  199 (839)
T ss_pred             cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence               4556788999999999999984 578999999999999999999999999999999999999986 58899999999


Q ss_pred             cEEEeeccCCeEE--EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        296 SVRVWKIQEESQL--VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       296 ~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      .+.+||++.....  .+..|.+++.|+.+++ ..+|++|+.|+.|+|||+.+...........        ..++.++.|
T Consensus       200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInT--------iapv~rVkW  271 (839)
T KOG0269|consen  200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINT--------IAPVGRVKW  271 (839)
T ss_pred             eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEee--------cceeeeeee
Confidence            9999999987655  7889999998888765 5689999999999999997654433332222        234999999


Q ss_pred             ecCCC-EEEEecC--CCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        373 LHNSD-LVASGSY--DGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       373 s~~~~-~l~~~~~--dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      -|... .||+++.  |-.|+|||+... -+..++..  |...++.++|-.....++-+++.|+.|..
T Consensus       272 RP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~e--H~~~vt~i~W~~~d~~~l~s~sKD~tv~q  336 (839)
T KOG0269|consen  272 RPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLE--HTDSVTGIAWDSGDRINLWSCSKDGTVLQ  336 (839)
T ss_pred             ccCccchhhhhhccccceEEEEeeccccccceeeec--cCccccceeccCCCceeeEeecCccHHHH
Confidence            99776 5666654  778999999865 34455554  88999999998755555555589998854

>KOG0321|consensus

Probab=99.95  E-value=7.9e-26  Score=202.60  Aligned_cols=288  Identities=14%  Similarity=0.226  Sum_probs=201.7

Q ss_pred             EEEEEcC---CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        146 TCIAVTS---DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       146 ~~~~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      ++..|++   ....||.+..+|.|.++|.........-........|.+.|..+.|.|....|++++.|.++++||+ ..
T Consensus        53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s  132 (720)
T KOG0321|consen   53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS  132 (720)
T ss_pred             ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence            3366665   3468899999999999998754332111111222379999999999997778999999999999999 44


Q ss_pred             ccEEe--ecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCce---------------------------eEEEeec
Q psy17902        222 EHLHT--FTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRA---------------------------YVETLFG  271 (454)
Q Consensus       222 ~~~~~--~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~---------------------------~~~~~~~  271 (454)
                      ..+..  +.+|.+.|.+++|.|.. ..|++|+.||.|.|||++-..                           .+.....
T Consensus       133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA  212 (720)
T KOG0321|consen  133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA  212 (720)
T ss_pred             eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence            44444  78999999999999954 678899999999999986321                           1111223


Q ss_pred             cCCceeE---EEeecCCCEEEEeeC-CCcEEEeeccCCeEE---------EEccc---cCCeE-EEEecCCCEEEEEeCC
Q psy17902        272 HQSAITS---LDILAKNRVISSGGT-DKSVRVWKIQEESQL---------VFNGH---SRGID-MTRRVNDQQFITCGED  334 (454)
Q Consensus       272 ~~~~v~~---~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~---------~~~~~---~~~i~-~~~~~~~~~l~~~~~d  334 (454)
                      +...|.+   +.+..|...|++++. |+.|+|||++.....         .+..+   ..++. .+.-..|.+|++.+.|
T Consensus       213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD  292 (720)
T KOG0321|consen  213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD  292 (720)
T ss_pred             ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence            4445555   555668888888887 999999999976543         12222   22233 3333457888888889


Q ss_pred             CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc-eeeEeccCCCceeeeE
Q psy17902        335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR-TLEFLQDIPLSGVINS  413 (454)
Q Consensus       335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~  413 (454)
                      +.|++|++............+..     ....-..-..+|++.+|++|+.|...++|.+.+.. ....+.+  |...|++
T Consensus       293 ~sIy~ynm~s~s~sP~~~~sg~~-----~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~G--ht~eVt~  365 (720)
T KOG0321|consen  293 NSIYFYNMRSLSISPVAEFSGKL-----NSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLG--HTREVTT  365 (720)
T ss_pred             CcEEEEeccccCcCchhhccCcc-----cceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhC--cceEEEE
Confidence            99999999764322211111110     01112334568999999999999999999998763 3333444  8889999


Q ss_pred             EEEcCCCCE-EEEEecCCCceeeeeeeCC
Q psy17902        414 LVFTSDHKH-LVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       414 l~~s~d~~~-l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++|.|..-. ++++ ++|.++.+|+...+
T Consensus       366 V~w~pS~~t~v~Tc-SdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  366 VRWLPSATTPVATC-SDDFRVKIWRLSNG  393 (720)
T ss_pred             EeeccccCCCceee-ccCcceEEEeccCc
Confidence            999886544 4444 89999999998554

>KOG0650|consensus

Probab=99.95  E-value=1.2e-25  Score=199.92  Aligned_cols=284  Identities=16%  Similarity=0.210  Sum_probs=217.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc--EEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE--LVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~  209 (454)
                      +...|+|  |++.|.||+..|.|.+|++|+.||+|+||.+.++.++..+.+       .+.|.|++|+|.+.  .||++.
T Consensus       392 ~~lvyrG--Htg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-------d~~I~~vaw~P~~~~~vLAvA~  462 (733)
T KOG0650|consen  392 CALVYRG--HTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-------DSEIRSVAWNPLSDLCVLAVAV  462 (733)
T ss_pred             eeeeEec--cCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-------cceeEEEEecCCCCceeEEEEe
Confidence            5667888  999999999999999999999999999999999999988874       45899999999764  444443


Q ss_pred             CCCcEEEEeC-CC-------------------------------------ccEEeecccCCCeEEEEEcCCCCEEEEEeC
Q psy17902        210 NNSNIKLWSS-SL-------------------------------------EHLHTFTGHKAPITGLAISFECDTLYSSSN  251 (454)
Q Consensus       210 ~dg~v~vw~~-~~-------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  251 (454)
                      ... +.|.+. -+                                     .-+.....|...|..+.|+..|.||++..-
T Consensus       463 ~~~-~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~  541 (733)
T KOG0650|consen  463 GEC-VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMP  541 (733)
T ss_pred             cCc-eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEecc
Confidence            322 333331 00                                     012344458889999999999999999865


Q ss_pred             C---CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEE-ecCCC
Q psy17902        252 D---RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTR-RVNDQ  326 (454)
Q Consensus       252 d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~-~~~~~  326 (454)
                      +   ..|.|+++........|....+.|.++.|+|...+|++++ ...|+|||+.....+ .+......+..+. .+.|+
T Consensus       542 ~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GD  620 (733)
T KOG0650|consen  542 DSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGD  620 (733)
T ss_pred             CCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCC
Confidence            3   4799999987776666766778899999999999888775 467999999875544 3333344444444 45688


Q ss_pred             EEEEEeCCCCEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc------CCC---
Q psy17902        327 QFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI------TPK---  396 (454)
Q Consensus       327 ~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~------~~~---  396 (454)
                      .|+.++.|+.+..||+.-. ++.+++..         |...+++++|++.-.+|++|+.||++.||.-      ..+   
T Consensus       621 nli~gs~d~k~~WfDldlsskPyk~lr~---------H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpli  691 (733)
T KOG0650|consen  621 NLILGSYDKKMCWFDLDLSSKPYKTLRL---------HEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLI  691 (733)
T ss_pred             eEEEecCCCeeEEEEcccCcchhHHhhh---------hhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCce
Confidence            9999999999999999654 45555543         4556999999999999999999999999853      222   


Q ss_pred             ceeeEeccCC--CceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        397 RTLEFLQDIP--LSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       397 ~~~~~~~~~~--~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      -++..+.++.  ....|.++.|+|...+|+++ |.||.|++|
T Consensus       692 VPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsA-GAd~tirlf  732 (733)
T KOG0650|consen  692 VPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSA-GADGTIRLF  732 (733)
T ss_pred             EeeeeccCceeecccceEeecccCCCceEEec-CCCceEEee
Confidence            2344455421  12448899999999999999 899999998

>KOG1034|consensus

Probab=99.95  E-value=1.5e-25  Score=185.49  Aligned_cols=296  Identities=17%  Similarity=0.257  Sum_probs=215.7

Q ss_pred             CCCCeEEEEEcC-----CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----CcEEEEecCC
Q psy17902        141 HRASITCIAVTS-----DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d  211 (454)
                      |+.+|..++|++     .-..+++++. ..+.+|.......+..++.... ..+....+.++|+-+    ..+||+|+.-
T Consensus        37 ~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D-~d~~Esfytcsw~yd~~~~~p~la~~G~~  114 (385)
T KOG1034|consen   37 HNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYAD-EDHDESFYTCSWSYDSNTGNPFLAAGGYL  114 (385)
T ss_pred             CCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccC-CCCCcceEEEEEEecCCCCCeeEEeecce
Confidence            999999999985     2345666655 5788888765443333222111 235667788888754    4589999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEEeecCCC
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLDILAKNR  286 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~  286 (454)
                      |.|+|.|+ .++....+.+|...|+.|.++|+. ++++++|.|..|++|++++..++..+   .+|...|.++.|++++.
T Consensus       115 GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd  194 (385)
T KOG1034|consen  115 GVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGD  194 (385)
T ss_pred             eEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCC
Confidence            99999999 788888999999999999999964 78999999999999999999999877   46999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-----------------------------EEccccCCeEEEEecCCCEEEEEeCCCCE
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-----------------------------VFNGHSRGIDMTRRVNDQQFITCGEDGTL  337 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-----------------------------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i  337 (454)
                      +|++++.|.+|++|++......                             ....|...+.|+.|. ++++++-+.++.|
T Consensus       195 ~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~-gd~ilSkscenaI  273 (385)
T KOG1034|consen  195 RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF-GDFILSKSCENAI  273 (385)
T ss_pred             eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH-hhheeecccCceE
Confidence            9999999999999999742211                             011122233333332 4788898999999


Q ss_pred             EEEecC-CCccceeeecccCCC------CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee--eEeccCCCc
Q psy17902        338 SLWSIL-KKVPTHTIPVAHGYD------SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL--EFLQDIPLS  408 (454)
Q Consensus       338 ~iwd~~-~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~  408 (454)
                      ..|... -.+.++.+.......      ..+.-..|-...+|.|-+++||.|...|.|.+||+....+.  .++......
T Consensus       274 ~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~  353 (385)
T KOG1034|consen  274 VCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSG  353 (385)
T ss_pred             EEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEecccc
Confidence            999872 222222221111000      00112233445566778889999999999999999877542  233333345


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ..|...+||.||..|++. .+|+.|..|+...
T Consensus       354 ~tVRQ~sfS~dgs~lv~v-cdd~~Vwrwdrv~  384 (385)
T KOG1034|consen  354 STVRQTSFSRDGSILVLV-CDDGTVWRWDRVS  384 (385)
T ss_pred             ceeeeeeecccCcEEEEE-eCCCcEEEEEeec
Confidence            679999999999999888 7999999998753

>KOG1539|consensus

Probab=99.95  E-value=2.4e-24  Score=198.83  Aligned_cols=285  Identities=18%  Similarity=0.312  Sum_probs=223.3

Q ss_pred             eEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        145 ITCIAVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       145 V~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      |+++. +|.  =+.++.|+..|.+.+||+.+++.+.+++      ++...|+++.-+|-=..+|.|..+|.|.++++ ..
T Consensus       162 Ital~-HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~------~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d  234 (910)
T KOG1539|consen  162 ITALL-HPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQ------EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD  234 (910)
T ss_pred             eeeEe-cchhheeeEEEeecCCcEEEEEeccCcEEEEec------ccccceeEeccCCcceEEEEeccCceEEEEEcccC
Confidence            87774 665  3678999999999999999999999887      57789999999998889999999999999999 66


Q ss_pred             ccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        222 EHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      +.+.+|+...+.|++++|..||+ .+++|+..|.+.+||++..+.+..+. .|.+.|..+.|.|....+++++.|+.+++
T Consensus       235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~  314 (910)
T KOG1539|consen  235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV  314 (910)
T ss_pred             cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence            67777775569999999999986 45566677999999999888776665 78889999999998899999999988887


Q ss_pred             eeccCCeE-----------------EEEcc--------------------------------------------------
Q psy17902        300 WKIQEESQ-----------------LVFNG--------------------------------------------------  312 (454)
Q Consensus       300 ~d~~~~~~-----------------~~~~~--------------------------------------------------  312 (454)
                      |=..++.-                 +.+.+                                                  
T Consensus       315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k  394 (910)
T KOG1539|consen  315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLK  394 (910)
T ss_pred             EEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhc
Confidence            74331100                 00000                                                  


Q ss_pred             -----------------------c-----------------------c------CCeEEEE-ecCCCEEEEEeCCCCEEE
Q psy17902        313 -----------------------H-----------------------S------RGIDMTR-RVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       313 -----------------------~-----------------------~------~~i~~~~-~~~~~~l~~~~~dg~i~i  339 (454)
                                             |                       .      ..+.+++ .+.|++.+.|+..|.|-+
T Consensus       395 ~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~  474 (910)
T KOG1539|consen  395 LPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDR  474 (910)
T ss_pred             CCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEE
Confidence                                   0                       0      1122222 345677788888999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--------------
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--------------  405 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--------------  405 (454)
                      |++.++-....+-      ....|...|+.++...-++.+++++.+|.+.+||+....++..+...              
T Consensus       475 fNmQSGi~r~sf~------~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l  548 (910)
T KOG1539|consen  475 FNMQSGIHRKSFG------DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDL  548 (910)
T ss_pred             EEcccCeeecccc------cCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhh
Confidence            9998886665553      12246777999999999999999999999999998765422211100              


Q ss_pred             -------------------------CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        406 -------------------------PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       406 -------------------------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                                               .|.+.|++++|||||++|+++ +.|+.|++||..++.-
T Consensus       549 ~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisa-smD~tIr~wDlpt~~l  610 (910)
T KOG1539|consen  549 LAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISA-SMDSTIRTWDLPTGTL  610 (910)
T ss_pred             hhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEe-ecCCcEEEEeccCcce
Confidence                                     488999999999999999999 8999999999987754

>KOG1036|consensus

Probab=99.95  E-value=4.5e-25  Score=181.35  Aligned_cols=241  Identities=13%  Similarity=0.175  Sum_probs=190.7

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      ....|..+.|+|.+..|++++.||++++|+.....+.....|..++.+++|.+ ...+++|+.||.|+.+|++++... .
T Consensus        12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~-~   89 (323)
T KOG1036|consen   12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNED-Q   89 (323)
T ss_pred             ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC-CceEEEeccCceEEEEEecCCcce-e
Confidence            45689999999999999999999999999996666666666999999999986 568999999999999999988754 4


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      +-.|..+|.||.+++..+.+++|+.|++|++||.+.............|.++ ...++.|++|+.+..|.+||+++....
T Consensus        90 igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~-~v~g~~LvVg~~~r~v~iyDLRn~~~~  168 (323)
T KOG1036|consen   90 IGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCM-DVSGNRLVVGTSDRKVLIYDLRNLDEP  168 (323)
T ss_pred             eccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEE-eccCCEEEEeecCceEEEEEcccccch
Confidence            4579999999999998899999999999999999975544333333344443 346788999999999999999986554


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC----ceeeEecc-------CCCceeeeEEEEc
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK----RTLEFLQD-------IPLSGVINSLVFT  417 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----~~~~~~~~-------~~~~~~v~~l~~s  417 (454)
                      ..... .      .-...+.|+++-|++.-.++++-||.|.+=.++..    ..-..++.       ...-.+|++|+|+
T Consensus       169 ~q~re-S------~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fh  241 (323)
T KOG1036|consen  169 FQRRE-S------SLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFH  241 (323)
T ss_pred             hhhcc-c------cceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEec
Confidence            42221 1      12344999999998888999999999887666544    22222222       1234589999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |-...|++| |.||.|.+|+...
T Consensus       242 p~~~tfaTg-GsDG~V~~Wd~~~  263 (323)
T KOG1036|consen  242 PIHGTFATG-GSDGIVNIWDLFN  263 (323)
T ss_pred             cccceEEec-CCCceEEEccCcc
Confidence            999999999 8999999999754

>KOG0268|consensus

Probab=99.94  E-value=1.1e-26  Score=194.45  Aligned_cols=241  Identities=17%  Similarity=0.349  Sum_probs=200.8

Q ss_pred             cCCCCCCceEEEEEeCCC-cEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17902        185 TDRKSYPPILALAVANNN-ELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       185 ~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  262 (454)
                      ...+|...|.|++=+|.. ..+++|+.||.|+|||+ +..++.++..|.+.|..|++..  ..+++++.|.+|+.|-+..
T Consensus        61 ~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~  138 (433)
T KOG0268|consen   61 SLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG  138 (433)
T ss_pred             hccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC
Confidence            335788999999999976 78999999999999999 7788899999999999999986  6789999999999999875


Q ss_pred             ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCC--CEEEEEeCCCCEEE
Q psy17902        263 RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND--QQFITCGEDGTLSL  339 (454)
Q Consensus       263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~i  339 (454)
                       ..+.++.+ .+.+..|.-+..++.++|++.  .|.|||.....++ .+.-....+.++.+.+.  ..|++|++|+.|.+
T Consensus       139 -~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvL  214 (433)
T KOG0268|consen  139 -PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVL  214 (433)
T ss_pred             -Ccceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEE
Confidence             46666643 456777887777888998876  4999999877666 55555556777777653  45667779999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcC
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      ||++...+++.+.....          .+.|+|+|.+-.+++|+.|..++.||+... .++....+  |...|.++.|||
T Consensus       215 yD~R~~~Pl~KVi~~mR----------TN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~d--hvsAV~dVdfsp  282 (433)
T KOG0268|consen  215 YDLRQASPLKKVILTMR----------TNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKD--HVSAVMDVDFSP  282 (433)
T ss_pred             EecccCCccceeeeecc----------ccceecCccccceeeccccccceehhhhhhcccchhhcc--cceeEEEeccCC
Confidence            99999999998876443          678999998889999999999999999865 55666665  889999999999


Q ss_pred             CCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        419 DHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      .|+-+++| +.|.+|+++....+...
T Consensus       283 tG~Efvsg-syDksIRIf~~~~~~SR  307 (433)
T KOG0268|consen  283 TGQEFVSG-SYDKSIRIFPVNHGHSR  307 (433)
T ss_pred             Ccchhccc-cccceEEEeecCCCcch
Confidence            99999999 99999999998776543

>KOG0267|consensus

Probab=99.94  E-value=2.5e-27  Score=215.01  Aligned_cols=250  Identities=23%  Similarity=0.415  Sum_probs=216.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      ..+++.+...-.+++|+.....            .|...+.++..-..++.+++|+.+..+-+|.+ ....+..+.+|..
T Consensus         4 ~~~~m~~~~~t~Lr~~~~~~~~------------~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hes   71 (825)
T KOG0267|consen    4 MEFLMKTKRATKLRVWDTREFV------------AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHES   71 (825)
T ss_pred             ccccceeeeeeccccccchhhh------------hhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCC
Confidence            3445555556677788765421            47778888888778899999999999999998 5666777999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN  311 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~  311 (454)
                      +|.++.|++...+|++|+.+|+|++||+...+.++++.+|...+.++.|+|-+.++++|+.|+.+.+||.+...+. .+.
T Consensus        72 pIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~  151 (825)
T KOG0267|consen   72 PIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK  151 (825)
T ss_pred             cceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeec
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999955444 888


Q ss_pred             cccCCeEEEEecCCC-EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902        312 GHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL  390 (454)
Q Consensus       312 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  390 (454)
                      +|...+.++.+.+++ +++.++.|..++|||+..++....+..         |...+..+.|+|..-++++|+.|++|++
T Consensus       152 s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~---------~e~~v~sle~hp~e~Lla~Gs~d~tv~f  222 (825)
T KOG0267|consen  152 SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKS---------HEGKVQSLEFHPLEVLLAPGSSDRTVRF  222 (825)
T ss_pred             CCcceeEEEeecCCCceeeccCCcceeeeeccccccccccccc---------ccccccccccCchhhhhccCCCCceeee
Confidence            899999998887655 788888999999999999998888864         3444889999999999999999999999


Q ss_pred             EEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        391 WKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ||+.+...+.....  ....|.+++|+|++..+++|
T Consensus       223 ~dletfe~I~s~~~--~~~~v~~~~fn~~~~~~~~G  256 (825)
T KOG0267|consen  223 WDLETFEVISSGKP--ETDGVRSLAFNPDGKIVLSG  256 (825)
T ss_pred             eccceeEEeeccCC--ccCCceeeeecCCceeeecC
Confidence            99988777776665  57789999999999988877

>KOG1273|consensus

Probab=99.94  E-value=3.2e-25  Score=182.59  Aligned_cols=242  Identities=16%  Similarity=0.197  Sum_probs=189.4

Q ss_pred             eEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec
Q psy17902        193 ILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG  271 (454)
Q Consensus       193 v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  271 (454)
                      ..|+.|++.|.+||+|+.||.|.|||+ +...-..+.+|..+|++++|+++|+.|+++|.|..|.+||+..|.++..+. 
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-  104 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-  104 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-
Confidence            789999999999999999999999999 666667889999999999999999999999999999999999999888875 


Q ss_pred             cCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEEEcccc-CCe-----EEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        272 HQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGHS-RGI-----DMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       272 ~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~i-----~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      ..++|+...|+|.. +.+++.-.+..-.+-++..+....+.... +..     ..++...++++++|...|.+.+|+..+
T Consensus       105 f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t  184 (405)
T KOG1273|consen  105 FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAET  184 (405)
T ss_pred             ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecch
Confidence            78899999999975 33343444445566666554443222211 111     112344688999999999999999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC---------ceeeEeccCCCceeeeEEE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK---------RTLEFLQDIPLSGVINSLV  415 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~v~~l~  415 (454)
                      .+++..+.....        ..|..+.++..|++|+.-+.|..|+.|++..-         .+...++..-....=.+++
T Consensus       185 ~e~vas~rits~--------~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~cc  256 (405)
T KOG1273|consen  185 LECVASFRITSV--------QAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCC  256 (405)
T ss_pred             heeeeeeeechh--------eeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhee
Confidence            999888876541        22889999999999999999999999998621         1112222222334456789


Q ss_pred             EcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        416 FTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       416 ~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ||.+|.|+++++..-+.+++|....|.-
T Consensus       257 fs~dgeYv~a~s~~aHaLYIWE~~~GsL  284 (405)
T KOG1273|consen  257 FSGDGEYVCAGSARAHALYIWEKSIGSL  284 (405)
T ss_pred             ecCCccEEEeccccceeEEEEecCCcce
Confidence            9999999999988899999998876643

>KOG2106|consensus

Probab=99.94  E-value=1.3e-23  Score=183.57  Aligned_cols=315  Identities=17%  Similarity=0.268  Sum_probs=222.2

Q ss_pred             hhhhhhcCcEeeeehhhh---ccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCC--------eEEEEEcCCCcee
Q psy17902        109 TVVLEQEGKLRVNIADRL---ANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDG--------IIIKWLLETRSKV  177 (454)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg--------~i~iwd~~~~~~~  177 (454)
                      +.++.+.|.+.+..+...   .-.....+.+.|  |+..|.||+.+|+.-.+++|-.-|        .+++||..+...+
T Consensus        70 Nly~lptgE~vyfvA~V~Vl~n~ee~~Qr~y~G--H~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL  147 (626)
T KOG2106|consen   70 NLYLLPTGELVYFVAAVGVLYNWEERSQRHYLG--HNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTL  147 (626)
T ss_pred             eeEEccCccEEEEeccEEEEEeehhhhcccccC--CCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceee
Confidence            445566666666555332   222336778889  999999999999988888775555        5899994433222


Q ss_pred             cccCCcc----------------------------------------cCCCCCCceEEEEEeCCCcEEEEecCCCcEEEE
Q psy17902        178 CSSPFVK----------------------------------------TDRKSYPPILALAVANNNELVASGDNNSNIKLW  217 (454)
Q Consensus       178 ~~~~~~~----------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw  217 (454)
                      ..+....                                        ........|....|+|....|+.....|.+..|
T Consensus       148 ~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw  227 (626)
T KOG2106|consen  148 HVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFW  227 (626)
T ss_pred             eeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEE
Confidence            2211000                                        001122345667777755444444445778888


Q ss_pred             eCCCccEE----eecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902        218 SSSLEHLH----TFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       218 ~~~~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      ++.+..+.    .+.. ....|.|++|.++|. +++|.++|.|.||+..+.+..+....|.+.|.+++...+|.+|- |+
T Consensus       228 ~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-Gg  305 (626)
T KOG2106|consen  228 TLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GG  305 (626)
T ss_pred             EccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cC
Confidence            87443332    2222 236799999999885 78999999999999988877777779999999999998887665 99


Q ss_pred             CCCcEEEeeccCCeE-----------------------------------------EEEccccCCe-EEEEecCCCEEEE
Q psy17902        293 TDKSVRVWKIQEESQ-----------------------------------------LVFNGHSRGI-DMTRRVNDQQFIT  330 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~-----------------------------------------~~~~~~~~~i-~~~~~~~~~~l~~  330 (454)
                      .|..|..||-.-.+.                                         +...+|.... ..+..+..+.|++
T Consensus       306 KDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T  385 (626)
T KOG2106|consen  306 KDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLT  385 (626)
T ss_pred             ccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheee
Confidence            999999998321110                                         0111222222 2333456778999


Q ss_pred             EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902        331 CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV  410 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  410 (454)
                      ++.|+.+++|+  ..+++.+...          ..+..|+.|+|.| .||.|+..|...+.|..+...+..-.   .+.+
T Consensus       386 ~gqdk~v~lW~--~~k~~wt~~~----------~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~---d~~~  449 (626)
T KOG2106|consen  386 CGQDKHVRLWN--DHKLEWTKII----------EDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHT---DNEQ  449 (626)
T ss_pred             ccCcceEEEcc--CCceeEEEEe----------cCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEe---cCCc
Confidence            99999999999  5556665543          2338999999999 99999999999999999855554433   4788


Q ss_pred             eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        411 INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       411 v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      ++.+.|+|+|.+||++ +.|+.|+++.+..+.+.
T Consensus       450 ls~v~ysp~G~~lAvg-s~d~~iyiy~Vs~~g~~  482 (626)
T KOG2106|consen  450 LSVVRYSPDGAFLAVG-SHDNHIYIYRVSANGRK  482 (626)
T ss_pred             eEEEEEcCCCCEEEEe-cCCCeEEEEEECCCCcE
Confidence            9999999999999999 89999999998776543

>KOG1274|consensus

Probab=99.94  E-value=2.3e-24  Score=201.07  Aligned_cols=248  Identities=15%  Similarity=0.215  Sum_probs=208.6

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC-ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SL-EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY  265 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  265 (454)
                      .|....+.++|.|+|.+|++++.||.|++|+. .. ....++..+...|.+++..  +++|++|+.+++|.+|.+.++..
T Consensus        11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~   88 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEE   88 (933)
T ss_pred             hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCCc
Confidence            57788999999999999999999999999997 32 3344444477888888765  55999999999999999998876


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~  343 (454)
                      -..+....-++++++++.+|++++.|+.|-.|++.++...... .+.+|..++.++.+. .+++|++.+.||.|++||+.
T Consensus        89 ~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~  168 (933)
T KOG1274|consen   89 DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQ  168 (933)
T ss_pred             cceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcc
Confidence            5555566788999999999999999999999999999876655 899999999888876 56788889999999999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      ++....++......... .....+..++|+|+|..|++.+.|+.|++|+..+......+....+...++.+.|+|+|.||
T Consensus       169 ~~~~~~tl~~v~k~n~~-~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~Yi  247 (933)
T KOG1274|consen  169 DGILSKTLTGVDKDNEF-ILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYI  247 (933)
T ss_pred             cchhhhhcccCCccccc-cccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEE
Confidence            99888777644322111 11344788999999888888889999999999998888888776566669999999999999


Q ss_pred             EEEecCCCceeeeeee
Q psy17902        424 VAGIGTEHRFGRWKTI  439 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~  439 (454)
                      |++ +.+|.|.+|++.
T Consensus       248 AAs-~~~g~I~vWnv~  262 (933)
T KOG1274|consen  248 AAS-TLDGQILVWNVD  262 (933)
T ss_pred             eee-ccCCcEEEEecc
Confidence            999 899999999987

>KOG0300|consensus

Probab=99.94  E-value=5.3e-25  Score=181.51  Aligned_cols=240  Identities=19%  Similarity=0.363  Sum_probs=203.3

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC------
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI------  260 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~------  260 (454)
                      +|...|..++.......+.+++.|.+.+||.+ .+.++.++.+|.+.|++|.|++.+.++++++.|++..||..      
T Consensus       146 GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~v  225 (481)
T KOG0300|consen  146 GHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEV  225 (481)
T ss_pred             ccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcC
Confidence            79999999998887789999999999999999 89999999999999999999999999999999999999962      


Q ss_pred             CC----------------------------------ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe
Q psy17902        261 ED----------------------------------RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES  306 (454)
Q Consensus       261 ~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  306 (454)
                      ..                                  ..++..+.+|.+.|.+..|...+..+++++.|.+..+||+.++.
T Consensus       226 P~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge  305 (481)
T KOG0300|consen  226 PSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGE  305 (481)
T ss_pred             CCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCc
Confidence            10                                  12455678999999999999999999999999999999999999


Q ss_pred             EE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        307 QL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       307 ~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      .+ .+.+|...++.+... ...++++.+.|.+.++||++.  .++.+....      +|...|+++.|..+. .+++|+.
T Consensus       306 ~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe--aI~sV~VFQ------GHtdtVTS~vF~~dd-~vVSgSD  376 (481)
T KOG0300|consen  306 VVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE--AIQSVAVFQ------GHTDTVTSVVFNTDD-RVVSGSD  376 (481)
T ss_pred             eeccccCcchhccccccCCcceEEEEeccCceeEeccchh--hcceeeeec------ccccceeEEEEecCC-ceeecCC
Confidence            88 888999888655544 556677888999999999983  444444333      356669999998765 6889999


Q ss_pred             CCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        385 DGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       385 dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |.+|++||+.+. .++.++.   ...+++.++.+..++.|+.- -++..|+++|...
T Consensus       377 DrTvKvWdLrNMRsplATIR---tdS~~NRvavs~g~~iIAiP-hDNRqvRlfDlnG  429 (481)
T KOG0300|consen  377 DRTVKVWDLRNMRSPLATIR---TDSPANRVAVSKGHPIIAIP-HDNRQVRLFDLNG  429 (481)
T ss_pred             CceEEEeeeccccCcceeee---cCCccceeEeecCCceEEec-cCCceEEEEecCC
Confidence            999999999877 5666666   57889999999888888877 7888999998753

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.94  E-value=5.1e-23  Score=185.90  Aligned_cols=261  Identities=10%  Similarity=0.100  Sum_probs=189.0

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DN  210 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~  210 (454)
                      ...+.+  |.. +.+++|+|++..+ ++++.++.|++||+.++.....+..      + ..+..++|+|+++.++++ ..
T Consensus        24 ~~~~~~--~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~------~-~~~~~~~~~~~g~~l~~~~~~   93 (300)
T TIGR03866        24 TRTFPV--GQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPS------G-PDPELFALHPNGKILYIANED   93 (300)
T ss_pred             EEEEEC--CCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccC------C-CCccEEEECCCCCEEEEEcCC
Confidence            444554  443 6789999999877 5667889999999998776654432      2 235678999999877655 55


Q ss_pred             CCcEEEEeCC-CccEEeecccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        211 NSNIKLWSSS-LEHLHTFTGHKAPITGLAISFECDTLYSSSNDR-SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       211 dg~v~vw~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      ++.|.+||+. ...+..+. +...+.+++|+|++.++++++.++ .+.+||..++.....+. ....+.+++|+|++.+|
T Consensus        94 ~~~l~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l  171 (300)
T TIGR03866        94 DNLVTVIDIETRKVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL-VDQRPRFAEFTADGKEL  171 (300)
T ss_pred             CCeEEEEECCCCeEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE-cCCCccEEEECCCCCEE
Confidence            8999999994 44455554 334568899999999999988765 46778998887765543 23456789999999887


Q ss_pred             EEe-eCCCcEEEeeccCCeEE-EEcccc--------CCeEEEEecCCCEEEE-EeCCCCEEEEecCCCccceeeecccCC
Q psy17902        289 SSG-GTDKSVRVWKIQEESQL-VFNGHS--------RGIDMTRRVNDQQFIT-CGEDGTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       289 ~~~-~~dg~i~i~d~~~~~~~-~~~~~~--------~~i~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      +++ ..++.|++||+.+++.. .+..+.        .+....+.+++.++++ .+.++.|.+||+.+++....+...   
T Consensus       172 ~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---  248 (300)
T TIGR03866       172 WVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVG---  248 (300)
T ss_pred             EEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeC---
Confidence            544 46899999999988765 222111        1123344556666444 456778999999887766554321   


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                             ..+.+++|+|+|.+|+++ +.+|.|.+||+.+++.+..+..   ....+.++|+|
T Consensus       249 -------~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~~~  300 (300)
T TIGR03866       249 -------QRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV---GRLPWGVVVRP  300 (300)
T ss_pred             -------CCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc---ccccceeEeCC
Confidence                   238899999999998876 4689999999999998888873   45568888876

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0283|consensus

Probab=99.93  E-value=6.2e-25  Score=203.59  Aligned_cols=203  Identities=16%  Similarity=0.274  Sum_probs=172.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  210 (454)
                      +++.|.|  |.+.|..++||.+ ++|++++.|.+|++|++....++..+.       |..-|+|++|+| |.+|+++|+-
T Consensus       361 P~~ef~G--Ht~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-------HndfVTcVaFnPvDDryFiSGSL  430 (712)
T KOG0283|consen  361 PFCEFKG--HTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-------HNDFVTCVAFNPVDDRYFISGSL  430 (712)
T ss_pred             chhhhhc--cchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-------cCCeeEEEEecccCCCcEeeccc
Confidence            6677889  9999999999976 699999999999999999999888875       999999999999 7889999999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--cc------CCceeEEEee
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GH------QSAITSLDIL  282 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~------~~~v~~~~~~  282 (454)
                      ||.|+||++....+.....-..-|++++|.|+|+..++|+.+|.+++|+....+....+.  .|      ...|+++.|.
T Consensus       431 D~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~  510 (712)
T KOG0283|consen  431 DGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFF  510 (712)
T ss_pred             ccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEec
Confidence            999999999777777776667899999999999999999999999999998877655432  11      2379999999


Q ss_pred             cCC-CEEEEeeCCCcEEEeeccCCeEE-EEcccc---CCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        283 AKN-RVISSGGTDKSVRVWKIQEESQL-VFNGHS---RGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       283 ~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~---~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      |.. ..+++.+.|..|+|||++....+ .+.+..   ..+...+..++.++++++.|..|++|++..
T Consensus       511 p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~  577 (712)
T KOG0283|consen  511 PGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS  577 (712)
T ss_pred             CCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence            765 45667789999999999876666 454443   346666677899999999999999999743

>KOG2445|consensus

Probab=99.93  E-value=2.9e-24  Score=176.40  Aligned_cols=274  Identities=14%  Similarity=0.242  Sum_probs=197.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~v~vw~  218 (454)
                      |.+-|.|+.|.+.|+.+|+|+.|++|.|||........  .....-+.|.+.|..+.|.+  -|+.+|+++.|+++.||.
T Consensus        12 h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W--~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE   89 (361)
T KOG2445|consen   12 HKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTW--SCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE   89 (361)
T ss_pred             CcceeeeeeecccCceeeeccCCCcEEEEeccCCCCce--EEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence            99999999999999999999999999999975443322  22223346889999999976  489999999999999997


Q ss_pred             CC----------CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce------eEEEee-------ccC
Q psy17902        219 SS----------LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA------YVETLF-------GHQ  273 (454)
Q Consensus       219 ~~----------~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~------~~~~~~-------~~~  273 (454)
                      -.          .....++......|+.+.|.|.  |-.|++++.||.|+||+.-..-      ....+.       .+.
T Consensus        90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~  169 (361)
T KOG2445|consen   90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK  169 (361)
T ss_pred             ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence            51          1224566778889999999984  6789999999999999865432      222222       366


Q ss_pred             CceeEEEeecC---CCEEEEeeCC-----CcEEEeeccCCe--EE---EEccccCCeEEEEecCC-----CEEEEEeCCC
Q psy17902        274 SAITSLDILAK---NRVISSGGTD-----KSVRVWKIQEES--QL---VFNGHSRGIDMTRRVND-----QQFITCGEDG  335 (454)
Q Consensus       274 ~~v~~~~~~~~---~~~l~~~~~d-----g~i~i~d~~~~~--~~---~~~~~~~~i~~~~~~~~-----~~l~~~~~dg  335 (454)
                      .+..|+.|+|.   ..+|++|+.+     +.++||......  ..   .+.+|..+|..+.|.+.     ..|++++.||
T Consensus       170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg  249 (361)
T KOG2445|consen  170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG  249 (361)
T ss_pred             CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc
Confidence            77889999975   3678887765     478898876543  22   67789999998888753     4688999999


Q ss_pred             CEEEEecCCCc------------cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        336 TLSLWSILKKV------------PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       336 ~i~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                       |+||.+....            ....++.. .......|.+.|..+.|+-.|..|++.+.||+|++|...-........
T Consensus       250 -v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~-~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~s  327 (361)
T KOG2445|consen  250 -VRIFKVKVARSAIEEEEVLAPDLMTDLPVE-KVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTS  327 (361)
T ss_pred             -EEEEEEeeccchhhhhcccCCCCccccceE-EeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeee
Confidence             9999986311            11111110 011133578889999999999999999999999999876543332222


Q ss_pred             cCCCceeeeEEEEcC
Q psy17902        404 DIPLSGVINSLVFTS  418 (454)
Q Consensus       404 ~~~~~~~v~~l~~s~  418 (454)
                      .+...+.+....|++
T Consensus       328 v~~~e~~~~~~~~~~  342 (361)
T KOG2445|consen  328 VLKAEGSVTKPDFSQ  342 (361)
T ss_pred             EEeccCCCCCccccc
Confidence            222344455555543

>KOG0639|consensus

Probab=99.93  E-value=3.2e-25  Score=193.35  Aligned_cols=238  Identities=16%  Similarity=0.280  Sum_probs=203.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      -...|.++.+.|||+.|++|+.-.++.|||+..........+.    ......++++.+||.++.+++..||.|.|||+ 
T Consensus       464 rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaelt----ssapaCyALa~spDakvcFsccsdGnI~vwDLh  539 (705)
T KOG0639|consen  464 RDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELT----SSAPACYALAISPDAKVCFSCCSDGNIAVWDLH  539 (705)
T ss_pred             cccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcC----CcchhhhhhhcCCccceeeeeccCCcEEEEEcc
Confidence            3456788899999999999999999999999876543332221    22345778999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      +...+..|++|++.+.||.++++|..|.+|+.|++|+.||++++..+... ...+.|.++.++|++.+|++|-.++.+.|
T Consensus       540 nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vev  618 (705)
T KOG0639|consen  540 NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEV  618 (705)
T ss_pred             cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEE
Confidence            77788999999999999999999999999999999999999998876554 35688999999999999999999999999


Q ss_pred             eeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        300 WKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       300 ~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                      ..........+..|...|..+.|. .+.+|++.+.|..+..|...-+..+...+-          ...|.++.+|.+.++
T Consensus       619 lh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqskE----------~SsVlsCDIS~ddky  688 (705)
T KOG0639|consen  619 LHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE----------SSSVLSCDISFDDKY  688 (705)
T ss_pred             EecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeeccc----------cCcceeeeeccCceE
Confidence            988887777888888887777665 588999999999999999988877776653          333999999999999


Q ss_pred             EEEecCCCcEEEEEc
Q psy17902        379 VASGSYDGCVKLWKI  393 (454)
Q Consensus       379 l~~~~~dg~v~iwd~  393 (454)
                      |+||+.|..-.||.+
T Consensus       689 IVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  689 IVTGSGDKKATVYEV  703 (705)
T ss_pred             EEecCCCcceEEEEE
Confidence            999999998888865

>KOG0267|consensus

Probab=99.93  E-value=3.1e-26  Score=208.00  Aligned_cols=235  Identities=21%  Similarity=0.376  Sum_probs=207.8

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .+..  |...|.|+..-..++.+++|+.|-.+-+|.+.....+..+.      +|..+|-++.|++...+|++|+.+|+|
T Consensus        23 ~~~~--hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~------~hespIeSl~f~~~E~Llaagsasgti   94 (825)
T KOG0267|consen   23 EFVA--HSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLT------GHESPIESLTFDTSERLLAAGSASGTI   94 (825)
T ss_pred             hhhh--hhhhhceeeeeccceeeccCCCceeeccccccCCchhheee------ccCCcceeeecCcchhhhcccccCCce
Confidence            3444  99999999987788999999999999999987766555433      799999999999999999999999999


Q ss_pred             EEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC
Q psy17902        215 KLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT  293 (454)
Q Consensus       215 ~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  293 (454)
                      ++||+ ..+.++++.+|...+.++.|+|-+.+++.|+.|+.+++||++..-+...+.+|...|.++.|+|+|.++++|+.
T Consensus        95 K~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~e  174 (825)
T KOG0267|consen   95 KVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGE  174 (825)
T ss_pred             eeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCC
Confidence            99999 78889999999999999999999999999999999999999988899999999999999999999999999999


Q ss_pred             CCcEEEeeccCCeEE-EEccccCCeEEEEecCCC-EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        294 DKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       294 dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      |.+++|||+..++.+ .|..|...+..+.+.+.+ .+.+|+.|+++++||+.+...+......         ...|.+.+
T Consensus       175 d~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~---------~~~v~~~~  245 (825)
T KOG0267|consen  175 DNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPE---------TDGVRSLA  245 (825)
T ss_pred             cceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCCc---------cCCceeee
Confidence            999999999999888 788899998888887765 4567889999999999877666554432         33399999


Q ss_pred             EecCCCEEEEecCCC
Q psy17902        372 CLHNSDLVASGSYDG  386 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg  386 (454)
                      |+|++..+++|....
T Consensus       246 fn~~~~~~~~G~q~s  260 (825)
T KOG0267|consen  246 FNPDGKIVLSGEQIS  260 (825)
T ss_pred             ecCCceeeecCchhh
Confidence            999999999887664

>KOG2055|consensus

Probab=99.93  E-value=1.5e-23  Score=181.24  Aligned_cols=237  Identities=13%  Similarity=0.238  Sum_probs=189.8

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCce
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRA  264 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~  264 (454)
                      ..+.|+++.|+|...+|++++.||.++||.+++   ..++.+.-...+|.+.+|.|+|. .+++++....++.||+.+.+
T Consensus       212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak  291 (514)
T KOG2055|consen  212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK  291 (514)
T ss_pred             CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence            445899999999999999999999999999944   45666666788999999999998 89999999999999998876


Q ss_pred             eE--EEeeccC-CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEEEEeCCCCEEEE
Q psy17902        265 YV--ETLFGHQ-SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLW  340 (454)
Q Consensus       265 ~~--~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iw  340 (454)
                      ..  ....++. ..+..+..++++++|+..+..|.|.+....++..+....-.+.+..+. ++++..|++++.+|.|.+|
T Consensus       292 ~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~  371 (514)
T KOG2055|consen  292 VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVW  371 (514)
T ss_pred             cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEE
Confidence            43  2333443 356778889999999999999999999999988874444444554444 4567889999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC------ceeeEeccCCCceeeeEE
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK------RTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~------~~~~~~~~~~~~~~v~~l  414 (454)
                      |++...+++++....+.        .-++++.++++.|||+|+..|.|.|||..+.      +++..+..  ....|++|
T Consensus       372 nl~~~~~~~rf~D~G~v--------~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dN--Ltt~Itsl  441 (514)
T KOG2055|consen  372 NLRQNSCLHRFVDDGSV--------HGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDN--LTTAITSL  441 (514)
T ss_pred             ecCCcceEEEEeecCcc--------ceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhh--hheeeeee
Confidence            99999999988765432        1577888899999999999999999996542      45555544  56789999


Q ss_pred             EEcCCCCEEEEEec-CCCceee
Q psy17902        415 VFTSDHKHLVAGIG-TEHRFGR  435 (454)
Q Consensus       415 ~~s~d~~~l~~~~~-~d~~i~~  435 (454)
                      .|+||++.|+.++. ....+++
T Consensus       442 ~Fn~d~qiLAiaS~~~knalrL  463 (514)
T KOG2055|consen  442 QFNHDAQILAIASRVKKNALRL  463 (514)
T ss_pred             eeCcchhhhhhhhhccccceEE
Confidence            99999999987732 2444444

>KOG1063|consensus

Probab=99.93  E-value=6.5e-24  Score=192.11  Aligned_cols=308  Identities=15%  Similarity=0.190  Sum_probs=232.5

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCC---EEEEEeCCCeEEEEEcCCCceec-------------------------ccCC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSK---HVYSACKDGIIIKWLLETRSKVC-------------------------SSPF  182 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~~~~~-------------------------~~~~  182 (454)
                      .....+.|  |.+.|.+++|...+.   +||+++.|..|+||.+.-.....                         .+.+
T Consensus       182 ~~v~el~G--H~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~  259 (764)
T KOG1063|consen  182 ARVAELEG--HTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF  259 (764)
T ss_pred             eEEEEeec--cchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence            36778889  999999999987544   88999999999999765332100                         0111


Q ss_pred             cccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc---cE-----EeecccCCCeEEEEEcCCCCEEEEEeCCCc
Q psy17902        183 VKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE---HL-----HTFTGHKAPITGLAISFECDTLYSSSNDRS  254 (454)
Q Consensus       183 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~---~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  254 (454)
                      .....+|...|+++.|+|.+..|++++.|.++.+|.....   -+     -...+......+..|+|+++.+++-+..|.
T Consensus       260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg  339 (764)
T KOG1063|consen  260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGG  339 (764)
T ss_pred             hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCc
Confidence            1223589999999999999999999999999999997222   11     122344556889999999999999999999


Q ss_pred             EEEEeCCCc---eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEEecC-C
Q psy17902        255 IKVWNIEDR---AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTRRVN-D  325 (454)
Q Consensus       255 i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~~-~  325 (454)
                      .++|-....   .....+.||...|+.++|+|.|.+|++.+.|.+-|+|-.-..+..     .-+-|...+.|+.+.+ +
T Consensus       340 ~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~  419 (764)
T KOG1063|consen  340 FHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED  419 (764)
T ss_pred             EEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence            999983332   233455799999999999999999999999999999865422221     4456777889999888 6


Q ss_pred             CEEEEEeCCCCEEEEecCCC--------------------------------ccceeeecccCCC---------------
Q psy17902        326 QQFITCGEDGTLSLWSILKK--------------------------------VPTHTIPVAHGYD---------------  358 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~~~--------------------------------~~~~~~~~~~~~~---------------  358 (454)
                      -.|++|.....+|+|+....                                ++...-....+..               
T Consensus       420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~  499 (764)
T KOG1063|consen  420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE  499 (764)
T ss_pred             ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence            67888889999999986311                                0000000000000               


Q ss_pred             --------------------CCCCCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902        359 --------------------SSSSEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPKRTLEFLQDIPLSGVINS  413 (454)
Q Consensus       359 --------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~v~~  413 (454)
                                          ..-+|...|.+++.+|+|+++|+++...     -|++|+..+-.....+..  |.-.|+.
T Consensus       500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~--HsLTVT~  577 (764)
T KOG1063|consen  500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG--HSLTVTR  577 (764)
T ss_pred             ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc--cceEEEE
Confidence                                0026777899999999999999998653     489999988777777776  8899999


Q ss_pred             EEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        414 LVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       414 l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      |+|||||++|++. +.|..+.+|.......
T Consensus       578 l~FSpdg~~LLsv-sRDRt~sl~~~~~~~~  606 (764)
T KOG1063|consen  578 LAFSPDGRYLLSV-SRDRTVSLYEVQEDIK  606 (764)
T ss_pred             EEECCCCcEEEEe-ecCceEEeeeeecccc
Confidence            9999999999999 8999999998755433

>KOG0269|consensus

Probab=99.93  E-value=2.4e-25  Score=203.76  Aligned_cols=237  Identities=16%  Similarity=0.270  Sum_probs=187.8

Q ss_pred             eEEEEEcC-CCCEEEEEeCCCeEEEEEcCCC---ceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeC
Q psy17902        145 ITCIAVTS-DSKHVYSACKDGIIIKWLLETR---SKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSS  219 (454)
Q Consensus       145 V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~  219 (454)
                      +..+.|+. +.++|||++..|.|.+||+...   ..+..+.      .|...+.++.|++. ..+|++|+.||.|++||+
T Consensus        90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~------EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~Dl  163 (839)
T KOG0269|consen   90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFN------EHERSANKLDFHSTEPNILISGSQDGTVKCWDL  163 (839)
T ss_pred             hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhh------hhccceeeeeeccCCccEEEecCCCceEEEEee
Confidence            45567764 4789999999999999999872   2222333      68899999999984 578999999999999999


Q ss_pred             -CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        220 -SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       220 -~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                       ......++.+....|..+.|+| .+..|+++...|.+++||++.. ++...+.+|.++|.|+.|+|++.+||||+.|+.
T Consensus       164 R~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~  243 (839)
T KOG0269|consen  164 RSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKM  243 (839)
T ss_pred             ecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCcc
Confidence             6677778888889999999999 5688999999999999999875 445667899999999999999999999999999


Q ss_pred             EEEeeccCCeEE--EEccccCCeEEEEecCC--CEEEEEe--CCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEE
Q psy17902        297 VRVWKIQEESQL--VFNGHSRGIDMTRRVND--QQFITCG--EDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       297 i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~--~~l~~~~--~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      |+|||+.+....  .......++..+.|-+.  .+|++++  .|-.|+|||++..- |..++..         |...++.
T Consensus       244 vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~e---------H~~~vt~  314 (839)
T KOG0269|consen  244 VKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLE---------HTDSVTG  314 (839)
T ss_pred             EEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeec---------cCccccc
Confidence            999999865443  34445567778887754  4577666  68899999997653 3333332         4455889


Q ss_pred             EEEec-CCCEEEEecCCCcEEEEEcCCC
Q psy17902        370 VACLH-NSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       370 ~~~s~-~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ++|.. +...|.+++.||+|..-.+.+.
T Consensus       315 i~W~~~d~~~l~s~sKD~tv~qh~~kna  342 (839)
T KOG0269|consen  315 IAWDSGDRINLWSCSKDGTVLQHLFKNA  342 (839)
T ss_pred             eeccCCCceeeEeecCccHHHHhhhhcc
Confidence            99975 4458899999998877666554

>KOG2048|consensus

Probab=99.93  E-value=4.5e-23  Score=186.36  Aligned_cols=248  Identities=19%  Similarity=0.271  Sum_probs=203.7

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc--cEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSSLE--HLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~--~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      ..+|.++||+.+.+.||.+-.+|.|-+|++...  ....+.+ ....|.+++|+ ++..|++.+.+|.|.-||+.+++..
T Consensus        25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~  103 (691)
T KOG2048|consen   25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQK  103 (691)
T ss_pred             ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCcee
Confidence            348999999999999999999999999999332  3334444 35679999999 5668899999999999999999999


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCCC-EEEEEeCCCCEEEEec
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSI  342 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~  342 (454)
                      ..+....+.|++++.+|.+..++.||.||.+..++...+...   .+....+.+-++.|.+.. .+++|+.||.|++||.
T Consensus       104 ~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~  183 (691)
T KOG2048|consen  104 YNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDV  183 (691)
T ss_pred             EEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEc
Confidence            999889999999999999999999999998888888777665   333444667777777655 5999999999999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                      ..+..++........ .....+.-|+++.|-.++ .|++|..-|+|.+||...+.+++.+..  |.+.|.+|+..+++.+
T Consensus       184 ~~~~t~~~~~~~~d~-l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gTLiqS~~~--h~adVl~Lav~~~~d~  259 (691)
T KOG2048|consen  184 KSGQTLHIITMQLDR-LSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSIFGTLIQSHSC--HDADVLALAVADNEDR  259 (691)
T ss_pred             CCCceEEEeeecccc-cccCCceEEEEEEEeecC-cEEEecCCceEEEEcccCcchhhhhhh--hhcceeEEEEcCCCCe
Confidence            999887743322211 111245558899888665 789999999999999999999988887  8899999999999999


Q ss_pred             EEEEecCCCceeeeeeeCCCe
Q psy17902        423 LVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ++++ |-|+.|..+...+..+
T Consensus       260 vfsa-Gvd~~ii~~~~~~~~~  279 (691)
T KOG2048|consen  260 VFSA-GVDPKIIQYSLTTNKS  279 (691)
T ss_pred             EEEc-cCCCceEEEEecCCcc
Confidence            9999 8999999888766644

>KOG2445|consensus

Probab=99.93  E-value=4.7e-23  Score=169.38  Aligned_cols=243  Identities=14%  Similarity=0.230  Sum_probs=182.3

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-----CCccEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-----SLEHLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNI  260 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-----~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~  260 (454)
                      +|..-|.++.|.+.|+.+|+|+.|++|+|||.     +..+....+.|.+.|..+.|.+  -|+.+++++.|+++.||.-
T Consensus        11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE   90 (361)
T KOG2445|consen   11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE   90 (361)
T ss_pred             CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence            67788999999999999999999999999996     2345567789999999999965  4899999999999999975


Q ss_pred             CC---------ceeEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCeEE-------EE-------ccccC
Q psy17902        261 ED---------RAYVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEESQL-------VF-------NGHSR  315 (454)
Q Consensus       261 ~~---------~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~-------~~-------~~~~~  315 (454)
                      ..         .....++....+.|+.+.|.|.  |-.|++++.||.+|||+......+       .+       ..+..
T Consensus        91 ~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~  170 (361)
T KOG2445|consen   91 QEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQ  170 (361)
T ss_pred             cccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccC
Confidence            21         1233456667889999999986  568899999999999997654332       11       12344


Q ss_pred             CeEEEEecCC----CEEEEEeCC-----CCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEEEEecCC----CEEEE
Q psy17902        316 GIDMTRRVND----QQFITCGED-----GTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSVACLHNS----DLVAS  381 (454)
Q Consensus       316 ~i~~~~~~~~----~~l~~~~~d-----g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~  381 (454)
                      ...|+.|.++    .+|++|+.+     +.+.||...... ....+..      ...|..+|+.++|.|+-    .+||+
T Consensus       171 ~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~------L~d~~dpI~di~wAPn~Gr~y~~lAv  244 (361)
T KOG2445|consen  171 PCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAE------LPDHTDPIRDISWAPNIGRSYHLLAV  244 (361)
T ss_pred             cceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehh------cCCCCCcceeeeeccccCCceeeEEE
Confidence            5567777653    456666655     478899875543 2222111      11367779999999954    38999


Q ss_pred             ecCCCcEEEEEcCCCc-----------------eeeEec-cCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        382 GSYDGCVKLWKITPKR-----------------TLEFLQ-DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       382 ~~~dg~v~iwd~~~~~-----------------~~~~~~-~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ++.|| |+||++....                 .+..+. ...|.+.|..+.|+-.|..|+++ |+||.|++|..
T Consensus       245 A~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsSt-GdDG~VRLWka  317 (361)
T KOG2445|consen  245 ATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSST-GDDGCVRLWKA  317 (361)
T ss_pred             eecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeec-CCCceeeehhh
Confidence            99999 9999987311                 112222 12488999999999999888887 99999999974

>KOG1009|consensus

Probab=99.93  E-value=2.4e-23  Score=177.29  Aligned_cols=289  Identities=16%  Similarity=0.219  Sum_probs=210.1

Q ss_pred             CCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceec---ccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEE
Q psy17902        142 RASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVC---SSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLW  217 (454)
Q Consensus       142 ~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw  217 (454)
                      ..+|.++.|.++.. .|+||+.|..|+||-+.....-.   .+.+......|...|+++.|+|+|.+||+|+.+|.|.+|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lW   92 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLW   92 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEE
Confidence            35799999998765 99999999999999876543322   333444445789999999999999999999999999999


Q ss_pred             eCC--------C---------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        218 SSS--------L---------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       218 ~~~--------~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      ...        .         .....+.+|...|..++|+|++.++++++.|..+++||+..|.....+..|...|..++
T Consensus        93 k~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgva  172 (434)
T KOG1009|consen   93 KQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVA  172 (434)
T ss_pred             EecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceee
Confidence            763        2         12345678999999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEEEEcc---------c--cCCe--------------EEEEecCCCEEEEEe---
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNG---------H--SRGI--------------DMTRRVNDQQFITCG---  332 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~--~~~i--------------~~~~~~~~~~l~~~~---  332 (454)
                      |.|-++++++-+.|...+++++.........+         +  .+..              ...+.+++..+++..   
T Consensus       173 wDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~  252 (434)
T KOG1009|consen  173 WDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLF  252 (434)
T ss_pred             cchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEccccee
Confidence            99999999999999988888776544331111         0  0111              122234455555433   


Q ss_pred             -CCCCE-----EEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEec------------------CCCEEEEecCCCc
Q psy17902        333 -EDGTL-----SLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLH------------------NSDLVASGSYDGC  387 (454)
Q Consensus       333 -~dg~i-----~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~------------------~~~~l~~~~~dg~  387 (454)
                       ..+.+     ++|+-.. .++...++..         ..+...+.|+|                  -+-.+|+++.+ .
T Consensus       253 ~~g~~~~~n~tYvfsrk~l~rP~~~lp~~---------~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~-s  322 (434)
T KOG1009|consen  253 KVGGGVFRNTSYVFSRKDLKRPAARLPSP---------KKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKN-S  322 (434)
T ss_pred             eeCCceeeceeEeeccccccCceeecCCC---------CcceEEEEeeeeEEEeccccccccccccccceEEEEeecc-e
Confidence             12222     3333221 1222222211         11233333333                  33456667665 6


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |+|||..+..++..+..+ |-..|++++|++||..|+.+ +.||-..+..+.+..
T Consensus       323 vyvydtq~~~P~~~v~ni-hy~~iTDiaws~dg~~l~vS-S~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  323 VYVYDTQTLEPLAVVDNI-HYSAITDIAWSDDGSVLLVS-STDGFCSLVTFEPWE  375 (434)
T ss_pred             EEEeccccccceEEEeee-eeeeecceeecCCCcEEEEe-ccCCceEEEEEcchh
Confidence            999999988888887765 77899999999999999999 899988776665543

>KOG1408|consensus

Probab=99.92  E-value=8.7e-24  Score=191.95  Aligned_cols=239  Identities=20%  Similarity=0.329  Sum_probs=200.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC---CCcEEEEecCCCcEEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN---NNELVASGDNNSNIKLW  217 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~v~vw  217 (454)
                      ....|.|++.+|+|++||+|..-|.++||++........+.      .|...|.|+.|+.   ..++||+++.|..|+||
T Consensus       458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~e------AHesEilcLeyS~p~~~~kLLASasrdRlIHV~  531 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFME------AHESEILCLEYSFPVLTNKLLASASRDRLIHVY  531 (1080)
T ss_pred             cccceEEEEECCCcceecccCccCceEEEEehhhhhhhhee------cccceeEEEeecCchhhhHhhhhccCCceEEEE
Confidence            45669999999999999999999999999999887777666      6999999999986   35789999999999999


Q ss_pred             eC--CCccEEeecccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCC-ceeEEEeec-----cCCceeEEEeecCCCE
Q psy17902        218 SS--SLEHLHTFTGHKAPITGLAISFEC--DTLYSSSNDRSIKVWNIED-RAYVETLFG-----HQSAITSLDILAKNRV  287 (454)
Q Consensus       218 ~~--~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~  287 (454)
                      |+  +...+.++.+|...|+++.|.-+|  ..+++++.|..|.+ +... ......+..     ....++.++..|..++
T Consensus       532 Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimF-r~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~  610 (1080)
T KOG1408|consen  532 DVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF-RVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKL  610 (1080)
T ss_pred             ecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhe-ehhccccCceeccccccccccceEEEeeeCCCcce
Confidence            99  667788999999999999998776  67889999987754 4332 111112211     2356889999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-EEcc---c-cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-VFNG---H-SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-~~~~---~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      +++++.|..|+||++.++++. .|.+   | ...|....-|.+.++++.+.|.++.++|+.+++++.+...         
T Consensus       611 v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~G---------  681 (1080)
T KOG1408|consen  611 VVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTG---------  681 (1080)
T ss_pred             EEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcC---------
Confidence            999999999999999999988 4443   3 3346777778899999999999999999999999988764         


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      |...|+.+.|.+|-+.|++.+.||.|.||.+..
T Consensus       682 HsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~  714 (1080)
T KOG1408|consen  682 HSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL  714 (1080)
T ss_pred             cchheeeeeecccchhheeecCCceEEEEECch
Confidence            455599999999999999999999999999864

>KOG4283|consensus

Probab=99.92  E-value=1.2e-22  Score=165.93  Aligned_cols=209  Identities=18%  Similarity=0.277  Sum_probs=170.7

Q ss_pred             CCCCceEEEEEeC-CCcEEEEecCCCcEEEEeCCCcc-------E---------EeecccCCCeEEEEEcC-CCCEEEEE
Q psy17902        188 KSYPPILALAVAN-NNELVASGDNNSNIKLWSSSLEH-------L---------HTFTGHKAPITGLAISF-ECDTLYSS  249 (454)
Q Consensus       188 ~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~~~~-------~---------~~~~~~~~~v~~~~~~~-~~~~l~~~  249 (454)
                      .|.+.|+++.+.+ .|+|+++|+.||.|.+||+....       +         ..-.+|.-.|.++.|-| |...+.++
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss  120 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS  120 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence            4778899999987 68999999999999999982211       1         11246888999999988 66788999


Q ss_pred             eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCC
Q psy17902        250 SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND  325 (454)
Q Consensus       250 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~  325 (454)
                      +.|.++++||.++.+....|. -.+.|.+-+++|-   ..++++|..+-.|++.|+.++... .+.+|...|..+.|++.
T Consensus       121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~  199 (397)
T KOG4283|consen  121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS  199 (397)
T ss_pred             cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence            999999999999988777764 6678888888875   357888888999999999999887 89999999998888764


Q ss_pred             C--EEEEEeCCCCEEEEecCCC-ccceeeecccCC-----CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902        326 Q--QFITCGEDGTLSLWSILKK-VPTHTIPVAHGY-----DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       326 ~--~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                      .  .|++|+.||.|++||++.. .+...+..+.+.     .....|.+.+..++|+.++.++++.+.|..+++|+..+|+
T Consensus       200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence            3  5778999999999999876 455555444321     1234678889999999999999999999999999998873

>KOG0270|consensus

Probab=99.92  E-value=1.3e-23  Score=180.85  Aligned_cols=249  Identities=16%  Similarity=0.215  Sum_probs=189.9

Q ss_pred             eEEEEEcC-------CCCEEEEEeCCCeEEEEEcCCCceecc-cCC--------------cccCCCCCCceEEEEEeCC-
Q psy17902        145 ITCIAVTS-------DSKHVYSACKDGIIIKWLLETRSKVCS-SPF--------------VKTDRKSYPPILALAVANN-  201 (454)
Q Consensus       145 V~~~~~s~-------~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~--------------~~~~~~~~~~v~~~~~~~~-  201 (454)
                      ..|+.|..       -|+|+|.|+.|..|.|||+.-...+.. +.+              .....+|...|.+++|+.. 
T Consensus       176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~  255 (463)
T KOG0270|consen  176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF  255 (463)
T ss_pred             chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence            45667643       278999999999999999864322111 000              0111368888889999875 


Q ss_pred             CcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEE
Q psy17902        202 NELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSL  279 (454)
Q Consensus       202 ~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~  279 (454)
                      .+.||+|+.|.+|.+||+ ++++..++..|.+.|.++.|+|. ..+|++|+.|++|.+.|.+........-...+.|-.+
T Consensus       256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv  335 (463)
T KOG0270|consen  256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV  335 (463)
T ss_pred             ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence            568999999999999999 88889999999999999999984 6789999999999999998543332222356789999


Q ss_pred             EeecCC-CEEEEeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecc
Q psy17902        280 DILAKN-RVISSGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       280 ~~~~~~-~~l~~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                      +|.|.. ..++++..||+|+-+|+|.. +++ ....|..+|..+.+..  .+++++++.|+.|++|++....+.......
T Consensus       336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~  415 (463)
T KOG0270|consen  336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHS  415 (463)
T ss_pred             EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccccc
Confidence            999876 66788889999999999987 444 8889999999888764  578999999999999999765553322211


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceee
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                      .       .-+...|+++.|+-. ++|.|+..+.++|||+.+...+.
T Consensus       416 ~-------~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~  455 (463)
T KOG0270|consen  416 F-------KLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR  455 (463)
T ss_pred             c-------cccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence            1       111267778888665 67888888899999998875554

>KOG0302|consensus

Probab=99.92  E-value=2.6e-23  Score=175.29  Aligned_cols=241  Identities=22%  Similarity=0.361  Sum_probs=182.5

Q ss_pred             CCCCceEEEEEeCC--CcEEEEecCCCcEEEEeCC-----------------CccEEeecccCCCeEEEEEcCC-CCEEE
Q psy17902        188 KSYPPILALAVANN--NELVASGDNNSNIKLWSSS-----------------LEHLHTFTGHKAPITGLAISFE-CDTLY  247 (454)
Q Consensus       188 ~~~~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~~-----------------~~~~~~~~~~~~~v~~~~~~~~-~~~l~  247 (454)
                      .|.+.++.+..++-  ..+.++-+..|.|.||++.                 ..++.++.+|.+.=++|+|||- ...|+
T Consensus       149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~Ll  228 (440)
T KOG0302|consen  149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLL  228 (440)
T ss_pred             ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccc
Confidence            46667777766664  4566666778999999962                 3457888999999999999993 34588


Q ss_pred             EEeCCCcEEEEeCCCceeE---EEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCC---eEEEEccccCCeEEE
Q psy17902        248 SSSNDRSIKVWNIEDRAYV---ETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEE---SQLVFNGHSRGIDMT  320 (454)
Q Consensus       248 ~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~i~~~  320 (454)
                      +|..-+.|++|...++...   ..+.+|...|-.|+|+|.. ..|++|+.||+|+|||++.+   .++....|...|+.+
T Consensus       229 sGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVI  308 (440)
T KOG0302|consen  229 SGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVI  308 (440)
T ss_pred             cCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeE
Confidence            9988899999999887543   3456899999999999975 78999999999999999988   455778999999999


Q ss_pred             EecCC-CEEEEEeCCCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCC
Q psy17902        321 RRVND-QQFITCGEDGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       321 ~~~~~-~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~  395 (454)
                      .|... .+|++|+.||+++|||++..   +++..+..         |..+|+++.|+|.. ..|++++.|.+|.+||+..
T Consensus       309 SWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~---------Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsv  379 (440)
T KOG0302|consen  309 SWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKY---------HKAPITSIEWHPHEDSVIAASGEDNQITIWDLSV  379 (440)
T ss_pred             EccCCcceeeecCCCceEEEEEhhhccCCCcceeEEe---------ccCCeeEEEeccccCceEEeccCCCcEEEEEeec
Confidence            99854 46899999999999999874   45555554         56669999999954 4888999999999999864


Q ss_pred             Cce--------ee--------EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        396 KRT--------LE--------FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       396 ~~~--------~~--------~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ..-        ..        .+.-+.....|..+.|++.-.-++++++-||. .+|..
T Consensus       380 E~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGf-nVfkt  437 (440)
T KOG0302|consen  380 EADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGF-NVFKT  437 (440)
T ss_pred             cCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccce-eEEEe
Confidence            211        11        11111123347788999887666555466653 44543

>KOG1063|consensus

Probab=99.92  E-value=6.7e-23  Score=185.65  Aligned_cols=294  Identities=14%  Similarity=0.179  Sum_probs=223.3

Q ss_pred             eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      +.|  |.+.|+++.|+|.+..|++++.|.++.+|...+...+..-... ....+........-|+|+++.+++-+..|..
T Consensus       263 l~G--HeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~  340 (764)
T KOG1063|consen  263 LMG--HEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF  340 (764)
T ss_pred             hcC--cccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence            458  9999999999999999999999999999987765332211110 0111344568889999999999999999999


Q ss_pred             EEEeCCC----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce----eEEEeeccCCceeEEEeecCCC
Q psy17902        215 KLWSSSL----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA----YVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       215 ~vw~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      ++|....    .....+.+|.+.|..++|+|.|.+|++++.|.+-+++-.-..+    .+..-+-|...++|+++-+...
T Consensus       341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~  420 (764)
T KOG1063|consen  341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL  420 (764)
T ss_pred             EEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCc
Confidence            9999422    3344567999999999999999999999999999998765221    1222345888999999988677


Q ss_pred             EEEEeeCCCcEEEeeccC-------------------------------------------CeE----------------
Q psy17902        287 VISSGGTDKSVRVWKIQE-------------------------------------------ESQ----------------  307 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~-------------------------------------------~~~----------------  307 (454)
                      .+++|.....+|+|+...                                           +..                
T Consensus       421 ~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L  500 (764)
T KOG1063|consen  421 QFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCEL  500 (764)
T ss_pred             eeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhc
Confidence            788888889999997521                                           000                


Q ss_pred             ------------------EEEccccCCeEEEEec-CCCEEEEEeC-----CCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        308 ------------------LVFNGHSRGIDMTRRV-NDQQFITCGE-----DGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       308 ------------------~~~~~~~~~i~~~~~~-~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                                        ..+.+|...+.++..+ +++.+++++.     ...|++|+..+....+.+..         |
T Consensus       501 ~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~---------H  571 (764)
T KOG1063|consen  501 TEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG---------H  571 (764)
T ss_pred             cCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc---------c
Confidence                              0123456667666655 4667777764     34689999988887776654         4


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee-eEe-ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL-EFL-QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~-~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      .-.|+.|+|||||++|++.+.|.++.+|........ ..+ ....|..-|.++.|+|++.+++++ +.|..|.+|.....
T Consensus       572 sLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTa-SRDK~VkVW~~~~~  650 (764)
T KOG1063|consen  572 SLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATA-SRDKKVKVWEEPDL  650 (764)
T ss_pred             ceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEe-cCCceEEEEeccCc
Confidence            445999999999999999999999999998554211 111 123488999999999999999988 89999999987665

>KOG4227|consensus

Probab=99.92  E-value=4.9e-23  Score=174.59  Aligned_cols=304  Identities=14%  Similarity=0.197  Sum_probs=220.5

Q ss_pred             CceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc-cCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902        129 ATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS-SPFVKTDRKSYPPILALAVANNNELVAS  207 (454)
Q Consensus       129 ~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~  207 (454)
                      ..++.+.+.+  |.+.|+++.|+.++++|++|+.|-.+++|+++..-.-.. .++......|...|.|++|...+++|++
T Consensus        45 R~~~qKD~~~--H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~S  122 (609)
T KOG4227|consen   45 RPFCQKDVRE--HTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYS  122 (609)
T ss_pred             cchhhhhhhh--hccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEec
Confidence            3445566778  999999999999999999999999999999875322222 1222233457789999999999999999


Q ss_pred             ecCCCcEEEEeCCCccEEeecccC---CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-eE--EEeeccCCceeEEEe
Q psy17902        208 GDNNSNIKLWSSSLEHLHTFTGHK---APITGLAISFECDTLYSSSNDRSIKVWNIEDRA-YV--ETLFGHQSAITSLDI  281 (454)
Q Consensus       208 ~~~dg~v~vw~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~--~~~~~~~~~v~~~~~  281 (454)
                      |..+++|.+.|+..+.......|.   +.|+.+..+|..+.|++.+.++.|.+||.+... .+  ..+........++.|
T Consensus       123 G~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F  202 (609)
T KOG4227|consen  123 GERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF  202 (609)
T ss_pred             CCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence            999999999999554444444444   499999999999999999999999999998654 22  122344566788999


Q ss_pred             ecCC-CEEEEeeCCCcEEEeeccCCeEEE-----Ecccc----CCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902        282 LAKN-RVISSGGTDKSVRVWKIQEESQLV-----FNGHS----RGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       282 ~~~~-~~l~~~~~dg~i~i~d~~~~~~~~-----~~~~~----~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                      +|.. .+|++.+..+-+-+||.+......     +.+..    ......+.++++.|++.-....-.+||+.+..+. .+
T Consensus       203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~-V~  281 (609)
T KOG4227|consen  203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCF-VL  281 (609)
T ss_pred             cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccce-eE
Confidence            9976 678888899999999999765541     11211    2245667778888888777777778888764332 22


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-----------------------ceeeEeccCCCc
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-----------------------RTLEFLQDIPLS  408 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-----------------------~~~~~~~~~~~~  408 (454)
                      +..+...+. .....+.+++|.-+.. +++|+.+-.|++|.+...                       ..+..+.+  |.
T Consensus       282 k~D~N~~GY-~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrG--HR  357 (609)
T KOG4227|consen  282 KSDHNPNGY-CNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRG--HR  357 (609)
T ss_pred             eccCCCCcc-eeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEec--cc
Confidence            222111000 1223477788876554 899999999999988532                       12334444  78


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ..++.+.|+|...+|+++ |-...+++|....
T Consensus       358 Sv~NQVRF~~H~~~l~SS-GVE~~~KlWS~~r  388 (609)
T KOG4227|consen  358 SVPNQVRFSQHNNLLVSS-GVENSFKLWSDHR  388 (609)
T ss_pred             ccccceeecCCcceEecc-chhhheecccccc
Confidence            889999999988777666 8999999997543

>KOG4378|consensus

Probab=99.92  E-value=2.5e-23  Score=181.40  Aligned_cols=263  Identities=13%  Similarity=0.143  Sum_probs=199.6

Q ss_pred             eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCc---cEEeecccCCCeEE
Q psy17902        161 CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSSSLE---HLHTFTGHKAPITG  236 (454)
Q Consensus       161 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~---~~~~~~~~~~~v~~  236 (454)
                      +....+++||+........+....    ....+..+.|+.... .+++.+.|..|++|.-.++   ....-+.....-.|
T Consensus         9 S~gd~~kl~D~s~~~~~~~~~~~t----~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~C   84 (673)
T KOG4378|consen    9 STGDKTKLSDFSDLETKSEYVHQT----AEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFC   84 (673)
T ss_pred             ccCCceEEeecccccCccccccCC----CCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHH
Confidence            333579999988755444333211    223588999987664 2334455788999987444   11111222224455


Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcccc--
Q psy17902        237 LAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHS--  314 (454)
Q Consensus       237 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--  314 (454)
                      ++......++++|+..++|+|||++...+.+.+.+|...|+++.++....+|++++..|.|.|..+.++......++.  
T Consensus        85 v~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sg  164 (673)
T KOG4378|consen   85 VACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSG  164 (673)
T ss_pred             HhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCC
Confidence            665556689999999999999999977777888999999999999999999999999999999999988777433333  


Q ss_pred             CCeEEEEecCC--CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEE
Q psy17902        315 RGIDMTRRVND--QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLW  391 (454)
Q Consensus       315 ~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iw  391 (454)
                      ..+..+.++..  .+|.+++.+|.|.+||+....+++.+...        |..+...|+|+|... +|++.+.|..|.+|
T Consensus       165 qsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~--------HsAP~~gicfspsne~l~vsVG~Dkki~~y  236 (673)
T KOG4378|consen  165 QSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEA--------HSAPCRGICFSPSNEALLVSVGYDKKINIY  236 (673)
T ss_pred             CeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhh--------ccCCcCcceecCCccceEEEecccceEEEe
Confidence            33446666654  35668889999999999988888776544        455688999999665 88899999999999


Q ss_pred             EcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        392 KITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       392 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      |+...+....+.   ...+.++++|+++|.+|++| ...|.|+.||..
T Consensus       237 D~~s~~s~~~l~---y~~Plstvaf~~~G~~L~aG-~s~G~~i~YD~R  280 (673)
T KOG4378|consen  237 DIRSQASTDRLT---YSHPLSTVAFSECGTYLCAG-NSKGELIAYDMR  280 (673)
T ss_pred             ecccccccceee---ecCCcceeeecCCceEEEee-cCCceEEEEecc
Confidence            999877776665   56789999999999999999 789999999975

>KOG2919|consensus

Probab=99.91  E-value=2.4e-22  Score=166.29  Aligned_cols=275  Identities=16%  Similarity=0.277  Sum_probs=201.7

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc------cCCcc-cCCCCCCceEEEEEe-------CCCcEEEEecC
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS------SPFVK-TDRKSYPPILALAVA-------NNNELVASGDN  210 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~-~~~~~~~~v~~~~~~-------~~~~~l~~~~~  210 (454)
                      ...+.|+|||..|++-+.|..+.+|++...-.-..      +.... ........|+..+|-       |+..++++.+.
T Consensus        52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr  131 (406)
T KOG2919|consen   52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR  131 (406)
T ss_pred             hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence            45789999999999999999999999753211111      00000 001233467777775       67789999999


Q ss_pred             CCcEEEEeC-CCccEEeecc--cCC---CeEEEEEcCCCCEEEEEeCCCcEEEEeC-CCceeEEE--e-----eccCCce
Q psy17902        211 NSNIKLWSS-SLEHLHTFTG--HKA---PITGLAISFECDTLYSSSNDRSIKVWNI-EDRAYVET--L-----FGHQSAI  276 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~--~~~---~v~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~--~-----~~~~~~v  276 (454)
                      +.-|++||. +++....+..  |..   ...+++|+|||.+|++|. ..+|+++|+ +.|.....  .     .+..+-|
T Consensus       132 ~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~gii  210 (406)
T KOG2919|consen  132 DQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGII  210 (406)
T ss_pred             cCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhccccccccee
Confidence            999999999 6666555543  443   345899999999999875 578999999 55532211  1     2346788


Q ss_pred             eEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEe-CCCCEEEEecCCC-ccceee
Q psy17902        277 TSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCG-EDGTLSLWSILKK-VPTHTI  351 (454)
Q Consensus       277 ~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~  351 (454)
                      .+++|+|.. ..+++|+....+-||.-....++ .+.+|.+.|+.+.+. +++.|++|+ .+..|..||++.. .++..+
T Consensus       211 sc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L  290 (406)
T KOG2919|consen  211 SCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYAL  290 (406)
T ss_pred             eeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhh
Confidence            999999976 58999999999999887777766 677999999988876 578888888 6789999999864 455555


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ..+.+.      .+.-.-+...|.+++|++|+.||.|++||+.. +..+..+..  +...++.++++|--..+++++|
T Consensus       291 ~rhv~~------TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~--~sd~vNgvslnP~mpilatssG  360 (406)
T KOG2919|consen  291 ERHVGD------TNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN--YSDTVNGVSLNPIMPILATSSG  360 (406)
T ss_pred             hhhccC------ccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccc--ccccccceecCcccceeeeccC
Confidence            433321      11123355678999999999999999999987 554555543  7888999999999887877743

>KOG0302|consensus

Probab=99.91  E-value=5.7e-23  Score=173.32  Aligned_cols=246  Identities=22%  Similarity=0.314  Sum_probs=183.3

Q ss_pred             CCCCCCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCce----------ecccCCcccCCCCCCceEEEEEeCCC-cEE
Q psy17902        139 KPHRASITCIAVTSDS--KHVYSACKDGIIIKWLLETRSK----------VCSSPFVKTDRKSYPPILALAVANNN-ELV  205 (454)
Q Consensus       139 ~~h~~~V~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l  205 (454)
                      -+|.+.|+.+..++-+  .+.++-+..|.|.||++...-.          ........+..+|...=++|+|||-. ..|
T Consensus       148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L  227 (440)
T KOG0302|consen  148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL  227 (440)
T ss_pred             cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence            3488999998888755  4556667789999999854211          01112223345688888999999932 248


Q ss_pred             EEecCCCcEEEEeC-CCcc---EEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCc---eeEEEeeccCCcee
Q psy17902        206 ASGDNNSNIKLWSS-SLEH---LHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQSAIT  277 (454)
Q Consensus       206 ~~~~~dg~v~vw~~-~~~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~  277 (454)
                      ++|..-+.|++|.. ++.-   ...+.+|+..|-.++|+|. ...|++||.||+|+|||++.+   .++.+ +.|.+.|+
T Consensus       228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVN  306 (440)
T KOG0302|consen  228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVN  306 (440)
T ss_pred             ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCcee
Confidence            88888899999998 3221   2345679999999999995 468999999999999999988   34433 78999999


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCcc----
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVP----  347 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~----  347 (454)
                      -|+|+....+|++|+.||+++|||++..+.-    .+..|..+|+++.|.+  ...|++++.|.+|.|||+.....    
T Consensus       307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~  386 (440)
T KOG0302|consen  307 VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEI  386 (440)
T ss_pred             eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChhhh
Confidence            9999988889999999999999999975433    8999999999999985  56788999999999999854321    


Q ss_pred             -------cee----eecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEE
Q psy17902        348 -------THT----IPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWK  392 (454)
Q Consensus       348 -------~~~----~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd  392 (454)
                             +..    +...|.      -...+..+.|+++-. +|++.+.|| +.||.
T Consensus       387 ~~~a~~~L~dlPpQLLFVHq------GQke~KevhWH~QiPG~lvsTa~dG-fnVfk  436 (440)
T KOG0302|consen  387 DQEAAEGLQDLPPQLLFVHQ------GQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK  436 (440)
T ss_pred             ccccccchhcCCceeEEEec------chhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence                   000    111111      122367788888654 888888898 66664

>KOG4378|consensus

Probab=99.91  E-value=6.8e-23  Score=178.72  Aligned_cols=259  Identities=14%  Similarity=0.193  Sum_probs=202.9

Q ss_pred             eEEEEEcCCCCEEEEE--eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902        145 ITCIAVTSDSKHVYSA--CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE  222 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~  222 (454)
                      |.++.|+.... |+++  +.|..|++|.-...  ...++.....  ....-.|++......|+++|+..+.|+|||+..+
T Consensus        37 ~~s~~w~~~n~-lvvas~~gdk~~~~~~K~g~--~~~Vp~~~k~--~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~k  111 (673)
T KOG4378|consen   37 DFSFNWQRRNF-LVVASMAGDKVMRIKEKDGK--TPEVPRVRKL--TGDNAFCVACASQSLYEISGGQSGCVKIWDLRAK  111 (673)
T ss_pred             ceeeeccccce-EEEeecCCceeEEEecccCC--CCccceeecc--ccchHHHHhhhhcceeeeccCcCceeeehhhHHH
Confidence            89999987653 5444  45778899964432  2233322222  2224455555556689999999999999999544


Q ss_pred             -cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CCceeEEEeecCCC-EEEEeeCCCcEEE
Q psy17902        223 -HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QSAITSLDILAKNR-VISSGGTDKSVRV  299 (454)
Q Consensus       223 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~dg~i~i  299 (454)
                       +.+.++.|+..|+++.++-...+|++++..|.|.|..+.++.....|... ...|+-+.|+|..+ +|.+++.+|.|.+
T Consensus       112 l~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~Vtl  191 (673)
T KOG4378|consen  112 LIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTL  191 (673)
T ss_pred             HHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEE
Confidence             45667899999999999999999999999999999999998877777533 34566899999875 5678899999999


Q ss_pred             eeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        300 WKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       300 ~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      ||+....+.  ....|..+...++|++  ...|++.+.|..|.+||++.......+...+.          .+.++|+++
T Consensus       192 wDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~P----------lstvaf~~~  261 (673)
T KOG4378|consen  192 WDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHP----------LSTVAFSEC  261 (673)
T ss_pred             EeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCC----------cceeeecCC
Confidence            999887666  5567888887777765  45788999999999999998877777765443          889999999


Q ss_pred             CCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCC
Q psy17902        376 SDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      |.+|++|+..|.|..||++.. .++..+..  |...|++++|-|.-
T Consensus       262 G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sa--h~~sVt~vafq~s~  305 (673)
T KOG4378|consen  262 GTYLCAGNSKGELIAYDMRSTKAPVAVRSA--HDASVTRVAFQPSP  305 (673)
T ss_pred             ceEEEeecCCceEEEEecccCCCCceEeee--cccceeEEEeeecc
Confidence            999999999999999999876 56666665  77889999998764

>KOG1538|consensus

Probab=99.91  E-value=1.1e-22  Score=183.58  Aligned_cols=274  Identities=15%  Similarity=0.187  Sum_probs=215.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH  223 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~  223 (454)
                      .|..++|-|||..|+.+.. ..+.+||...+..+.++.      +|...|+|++|+.+|+.+|+|+.|..|.+|+...+-
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLK------gHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG   86 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLK------GHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG   86 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccc------cccceEEEEEEccCCceeccCCCceeEEEecccccc
Confidence            7999999999998887754 579999999999888877      799999999999999999999999999999985544


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      +..+ .|++.|.|+.|+|-.+.|++++.+ ..-+|........ .. .....|.+.+|..||.+|+.|-.+|+|.+-+-.
T Consensus        87 ~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~-K~-kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~  162 (1081)
T KOG1538|consen   87 ILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS-KH-KSSSRIICCSWTNDGQYLALGMFNGTISIRNKN  162 (1081)
T ss_pred             eeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH-hh-hhheeEEEeeecCCCcEEEEeccCceEEeecCC
Confidence            4444 499999999999999999998864 3678987754432 22 235678899999999999999999999998765


Q ss_pred             CCeEEEEc---cccCCeEEEEecC------CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        304 EESQLVFN---GHSRGIDMTRRVN------DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       304 ~~~~~~~~---~~~~~i~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      ........   +...+|..+.+.+      .+.+++.....++.+|.+.....-.....          .-...|+.+.+
T Consensus       163 gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~r~L----------~FdP~CisYf~  232 (1081)
T KOG1538|consen  163 GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKDRAL----------NFDPCCISYFT  232 (1081)
T ss_pred             CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeecccccC----------CCCchhheecc
Confidence            54444333   3556676666654      24566777777787777744322212111          11267899999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|.+++.|+.|+.+++|- +.|-.+.++..  ....|++++..|++++++.| ..||+|..++...++
T Consensus       233 NGEy~LiGGsdk~L~~fT-R~GvrLGTvg~--~D~WIWtV~~~PNsQ~v~~G-CqDGTiACyNl~fST  296 (1081)
T KOG1538|consen  233 NGEYILLGGSDKQLSLFT-RDGVRLGTVGE--QDSWIWTVQAKPNSQYVVVG-CQDGTIACYNLIFST  296 (1081)
T ss_pred             CCcEEEEccCCCceEEEe-ecCeEEeeccc--cceeEEEEEEccCCceEEEE-EccCeeehhhhHHhH
Confidence            999999999999999996 45667777765  67889999999999999999 799999988875543

>KOG0321|consensus

Probab=99.90  E-value=1.6e-22  Score=181.59  Aligned_cols=244  Identities=18%  Similarity=0.260  Sum_probs=182.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC-cEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN-ELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~  219 (454)
                      |.+.|..+.|-|....|++++.|.++++||+.+......-    ...+|...|.+++|.+.. ..+++|+.||.|.|||+
T Consensus        99 H~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~----~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~  174 (720)
T KOG0321|consen   99 HKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGR----LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDC  174 (720)
T ss_pred             ccceeEeeccCCCceeEEEccCCceeeeeeeccceeecce----eecccccccchhhhccCCCcceeeccCCCcEEEEEE
Confidence            9999999999997788999999999999999987766542    112799999999999954 57889999999999997


Q ss_pred             --CCc-------------------c-------EEeecccCCCeEE---EEEcCCCCEEEEEeC-CCcEEEEeCCCceeEE
Q psy17902        220 --SLE-------------------H-------LHTFTGHKAPITG---LAISFECDTLYSSSN-DRSIKVWNIEDRAYVE  267 (454)
Q Consensus       220 --~~~-------------------~-------~~~~~~~~~~v~~---~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~  267 (454)
                        ++.                   +       +.....+...|.+   +.+..|...|++++. |+.|+|||++......
T Consensus       175 R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~  254 (720)
T KOG0321|consen  175 RCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY  254 (720)
T ss_pred             eccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence              220                   0       1111234444555   555568889999887 9999999998754432


Q ss_pred             E--------eecc---CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccC---CeEEEEecCCCEEEE
Q psy17902        268 T--------LFGH---QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSR---GIDMTRRVNDQQFIT  330 (454)
Q Consensus       268 ~--------~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---~i~~~~~~~~~~l~~  330 (454)
                      .        +..|   .-.+.++.....|.+|++.+.|+.|++|++.+-...   .+.++..   .+.....+++.++++
T Consensus       255 r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~S  334 (720)
T KOG0321|consen  255 RQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLS  334 (720)
T ss_pred             ccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEec
Confidence            2        2223   345778888888999988889999999999875544   3333322   234555678899999


Q ss_pred             EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902        331 CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~  396 (454)
                      |+.|...++|.+.+...-..+...        |...|++++|.|... -+++++.|.+++||++..+
T Consensus       335 gSsd~~ayiw~vs~~e~~~~~l~G--------ht~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~  393 (720)
T KOG0321|consen  335 GSSDEQAYIWVVSSPEAPPALLLG--------HTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG  393 (720)
T ss_pred             cCCCcceeeeeecCccCChhhhhC--------cceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence            999999999999876554444333        344499999988443 4667799999999999765

>KOG0307|consensus

Probab=99.90  E-value=2.7e-23  Score=198.66  Aligned_cols=285  Identities=16%  Similarity=0.217  Sum_probs=212.0

Q ss_pred             EEEEEcCCCC-EEEEEe----------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcE----EEEecC
Q psy17902        146 TCIAVTSDSK-HVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNEL----VASGDN  210 (454)
Q Consensus       146 ~~~~~s~~~~-~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----l~~~~~  210 (454)
                      -.++|+|.+. ++++|.          .+.++-||.+........+..... .......+.++|.+.+..    ||.|..
T Consensus        10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s-~~s~~rF~kL~W~~~g~~~~GlIaGG~e   88 (1049)
T KOG0307|consen   10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGS-LQSSNRFNKLAWGSYGSHSHGLIAGGLE   88 (1049)
T ss_pred             ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccc-ccccccceeeeecccCCCccceeecccc
Confidence            3568899876 566553          345666665543222211111110 023457889999987665    888999


Q ss_pred             CCcEEEEeCCC-------ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEe--eccCCceeEEE
Q psy17902        211 NSNIKLWSSSL-------EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLD  280 (454)
Q Consensus       211 dg~v~vw~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~  280 (454)
                      ||.|.+||...       ..+.+...|.+.|..+.|++.. +.|++|+.||.|.|||++..+.-..+  ......|.+++
T Consensus        89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~ls  168 (1049)
T KOG0307|consen   89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLS  168 (1049)
T ss_pred             CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEec
Confidence            99999999722       3356678899999999999965 59999999999999999875544333  12457899999


Q ss_pred             eecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccccC--CeEEEEecCC--CEEEEEeCC---CCEEEEecCCC-cccee
Q psy17902        281 ILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGHSR--GIDMTRRVND--QQFITCGED---GTLSLWSILKK-VPTHT  350 (454)
Q Consensus       281 ~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~--~i~~~~~~~~--~~l~~~~~d---g~i~iwd~~~~-~~~~~  350 (454)
                      |+.. ..+|++++.+|.+.|||++..+.+ .+..+..  .+..+.|+++  ..+++++.|   -.|.+||++.. .+++.
T Consensus       169 WNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~  248 (1049)
T KOG0307|consen  169 WNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKI  248 (1049)
T ss_pred             cchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhh
Confidence            9865 478899999999999999998766 4444443  3566667654  367777654   36999999764 34444


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      +..         |...|.++.|++.+ ++|++++.|+.|.+|+.++++.+..+..  ....+..+.|+|...-++++.+-
T Consensus       249 ~~~---------H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~--~~nW~fdv~w~pr~P~~~A~asf  317 (1049)
T KOG0307|consen  249 LEG---------HQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA--QGNWCFDVQWCPRNPSVMAAASF  317 (1049)
T ss_pred             hcc---------cccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC--CCcceeeeeecCCCcchhhhhee
Confidence            432         55569999999976 7999999999999999999999998886  67889999999999977777699


Q ss_pred             CCceeeeeeeCCC
Q psy17902        430 EHRFGRWKTIKGV  442 (454)
Q Consensus       430 d~~i~~W~~~~~~  442 (454)
                      ||.|.|+......
T Consensus       318 dgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  318 DGKISIYSLQGTD  330 (1049)
T ss_pred             ccceeeeeeecCC
Confidence            9999999876654

>KOG1188|consensus

Probab=99.90  E-value=6.2e-22  Score=165.12  Aligned_cols=276  Identities=13%  Similarity=0.228  Sum_probs=198.5

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCCcEEEEeC-CC--ccEEeecc
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNSNIKLWSS-SL--EHLHTFTG  229 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~v~vw~~-~~--~~~~~~~~  229 (454)
                      ..+|++...|.|++||..+++.+..+.      ++...++.+.|..  ....+.+|+.||+|++||+ ..  .....+..
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk------~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~  114 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFK------GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ  114 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheec------CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC
Confidence            578999999999999999988887776      5777888888876  5678999999999999999 22  23334445


Q ss_pred             cC-CCeEEEEEcCCCCEEEEEe----CCCcEEEEeCCCcee-EEEe-eccCCceeEEEeecCC-CEEEEeeCCCcEEEee
Q psy17902        230 HK-APITGLAISFECDTLYSSS----NDRSIKVWNIEDRAY-VETL-FGHQSAITSLDILAKN-RVISSGGTDKSVRVWK  301 (454)
Q Consensus       230 ~~-~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~-~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d  301 (454)
                      +. .+..+++.+-.++.+++|+    .+-.|.+||++..+. +..+ ..|...|+++.|+|.. ++|++|+.||.|.+||
T Consensus       115 ~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD  194 (376)
T KOG1188|consen  115 QSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFD  194 (376)
T ss_pred             CCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeee
Confidence            55 4667777766777888875    367899999998776 4444 4799999999999976 8999999999999999


Q ss_pred             ccCCeEE----EEccccCCeEEEEecCCC--EEEEEeCCCCEEEEecCCCccceeeecccCCCCCC---CCCCcEEEEEE
Q psy17902        302 IQEESQL----VFNGHSRGIDMTRRVNDQ--QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS---SEPNWITSVAC  372 (454)
Q Consensus       302 ~~~~~~~----~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~  372 (454)
                      +.....-    ....+...|.++-|....  .+.+-+..++..+|++..+.+...+....-.....   ....++...-.
T Consensus       195 ~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~  274 (376)
T KOG1188|consen  195 TKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHS  274 (376)
T ss_pred             cCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeeccc
Confidence            9875332    445566778888888765  78999999999999999888666554331100000   00011211111


Q ss_pred             ecCCCEEEEecC-CCcEEEEEcC---CC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        373 LHNSDLVASGSY-DGCVKLWKIT---PK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       373 s~~~~~l~~~~~-dg~v~iwd~~---~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ..+...++.++. -|...++-+.   ++   ..+..+.+ .|...|.++.|...+.++++| |.||.+.+|..
T Consensus       275 ~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g-~~~eiVR~i~~~~~~~~l~TG-GEDG~l~~Wk~  345 (376)
T KOG1188|consen  275 PGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQG-GHEEIVRDILFDVKNDVLYTG-GEDGLLQAWKV  345 (376)
T ss_pred             CCCcceEEEeccccCceeEEEeeecccccccCccccccC-CcHHHHHHHhhhcccceeecc-CCCceEEEEec
Confidence            223345554444 5666666554   23   33333433 366678999999889999988 99999999985

>KOG0649|consensus

Probab=99.89  E-value=2.1e-20  Score=148.95  Aligned_cols=275  Identities=17%  Similarity=0.221  Sum_probs=194.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeccc----CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSS----PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      .|.+-+++|.+++|++|..+|.|-+..+.........    .......+|.++|+.++|..  .+|++|+ ||.|+-|..
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g-dG~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG-DGLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc-CceEEEeee
Confidence            3667789999999999999999999987642211111    11122357999999999983  4677776 499999986


Q ss_pred             C-C------ccEEe--ecccC-----CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC
Q psy17902        220 S-L------EHLHT--FTGHK-----APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       220 ~-~------~~~~~--~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  285 (454)
                      . .      +.+..  ...|.     ..|+++...|..+-++.++.|+.++.||+++|+..+.+++|+..|.++.--...
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~  168 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN  168 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence            1 1      11111  11222     368899999988888888899999999999999999999999999999986666


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEcccc----------CCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHS----------RGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      ..+++|+.||++++||+++.+.+...+..          +....+...+.+.++ |+....+.+|.++...+...++...
T Consensus       169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~edWlv-CGgGp~lslwhLrsse~t~vfpipa  247 (325)
T KOG0649|consen  169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNEDWLV-CGGGPKLSLWHLRSSESTCVFPIPA  247 (325)
T ss_pred             cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCceEE-ecCCCceeEEeccCCCceEEEeccc
Confidence            78889999999999999999887433221          111122223444444 4556679999999999999998643


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                                .+..+.|..+  .+++++..+.|.-|.+. |..-..+..  .....++..|+-.--.+++..|...++.+
T Consensus       248 ----------~v~~v~F~~d--~vl~~G~g~~v~~~~l~-Gvl~a~ip~--~s~~c~s~s~~~~p~k~~s~ag~s~~~~i  312 (325)
T KOG0649|consen  248 ----------RVHLVDFVDD--CVLIGGEGNHVQSYTLN-GVLQANIPV--ESTACYSASWQTSPIKFISIAGFSNKLHI  312 (325)
T ss_pred             ----------ceeEeeeecc--eEEEeccccceeeeeec-cEEEEeccC--CccceeeecccCCceEEEEecccceeeee
Confidence                      3778888554  78888878889999875 333333332  22335556665444455666588877766


Q ss_pred             ee
Q psy17902        436 WK  437 (454)
Q Consensus       436 W~  437 (454)
                      ..
T Consensus       313 ~~  314 (325)
T KOG0649|consen  313 LK  314 (325)
T ss_pred             ee
Confidence            64

>KOG0307|consensus

Probab=99.89  E-value=5.3e-23  Score=196.69  Aligned_cols=247  Identities=19%  Similarity=0.316  Sum_probs=196.2

Q ss_pred             CCCeEEEEEcCCCCE----EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC-cEEEEecCCCcEEE
Q psy17902        142 RASITCIAVTSDSKH----VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN-ELVASGDNNSNIKL  216 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~----l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~v  216 (454)
                      ...-+.++|.+.+..    ||.|..||.|.+||......-...........|.+.|..+.|++.. ++||+|+.+|.|.|
T Consensus        64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i  143 (1049)
T KOG0307|consen   64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI  143 (1049)
T ss_pred             cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence            345688999987765    8999999999999987642223333444555799999999999965 49999999999999


Q ss_pred             EeCCC-ccEEee--cccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCC--ceeEEEeecCC-CEEE
Q psy17902        217 WSSSL-EHLHTF--TGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS--AITSLDILAKN-RVIS  289 (454)
Q Consensus       217 w~~~~-~~~~~~--~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~-~~l~  289 (454)
                      ||+.. ..-.++  ......|.+++|+.. .+.|++++.+|.+.|||++..+.+..+..+.+  .+..+.|+|+. ..|+
T Consensus       144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~  223 (1049)
T KOG0307|consen  144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL  223 (1049)
T ss_pred             eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence            99933 222222  235678999999864 56788999999999999999888877765554  46789999997 5566


Q ss_pred             EeeCCC---cEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        290 SGGTDK---SVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       290 ~~~~dg---~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      +++.|.   .|.+||+|.....  .+.+|..+|.++.|..  ..++++++.|+.|.+|+..+++.+..++.         
T Consensus       224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~---------  294 (1049)
T KOG0307|consen  224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA---------  294 (1049)
T ss_pred             eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC---------
Confidence            666554   6899999865443  6789999998888774  36888999999999999999999988875         


Q ss_pred             CCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCc
Q psy17902        363 EPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~  397 (454)
                      ...|+..+.|+|... +|++++.||.|.||.+....
T Consensus       295 ~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~  330 (1049)
T KOG0307|consen  295 QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD  330 (1049)
T ss_pred             CCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence            356799999999766 89999999999999997663

>KOG0322|consensus

Probab=99.89  E-value=2.5e-22  Score=161.62  Aligned_cols=287  Identities=15%  Similarity=0.222  Sum_probs=198.1

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      ...|++  |.+.|+|+.|..++ +|++|..-|.|.+|++.+......+..     .+...|+.+..-|+ ..|.+-+.|+
T Consensus         7 ~fvLRp--~~~~v~s~~fqa~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~-----~g~~~it~lq~~p~-d~l~tqgRd~   77 (323)
T KOG0322|consen    7 FFVLRP--HSSSVTSVLFQANE-RLMSGLSVGIVKMWVLQTERDLPLIRL-----FGRLFITNLQSIPN-DSLDTQGRDP   77 (323)
T ss_pred             eeEecc--ccchheehhhccch-hhhcccccceEEEEEeecCccchhhhh-----hccceeeceeecCC-cchhhcCCCc
Confidence            445556  99999999998876 499999999999999999877766653     36668999988887 4688888999


Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCC-----CC----EEEEEeCCC-cEEEEeCCCceeEEEe----eccCCceeE
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFE-----CD----TLYSSSNDR-SIKVWNIEDRAYVETL----FGHQSAITS  278 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~-----~~----~l~~~~~dg-~i~iwd~~~~~~~~~~----~~~~~~v~~  278 (454)
                      .+.+|++........  |.-.++++.|++.     ++    .++.-+... .+.+-|......+...    .+..+.++|
T Consensus        78 ~L~lw~ia~s~~i~i--~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc  155 (323)
T KOG0322|consen   78 LLILWTIAYSAFISI--HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMC  155 (323)
T ss_pred             eEEEEEccCcceEEE--eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceee
Confidence            999999955332222  3345555655532     11    111111100 1222333222222222    134466777


Q ss_pred             EEeecC-C--CEEEEeeCCCcEEEeeccCCeEE-----------EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecC
Q psy17902        279 LDILAK-N--RVISSGGTDKSVRVWKIQEESQL-----------VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       279 ~~~~~~-~--~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~  343 (454)
                      ..+.-. +  -++++|.++|.+.+||+.++..+           ....|..++..+.+.+ -+.=++|+.+..+..|++.
T Consensus       156 ~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~  235 (323)
T KOG0322|consen  156 QDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLN  235 (323)
T ss_pred             eeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeec
Confidence            775432 2  35678889999999999986333           3344556665555432 2344677777888899886


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      .......+......     ....|..+.+-||++++|+++.|+.||||+..+.+++..+..  |.+.|++++|+|+...+
T Consensus       236 ~s~gslq~~~e~~l-----knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLky--Hsagvn~vAfspd~~lm  308 (323)
T KOG0322|consen  236 HSTGSLQIRKEITL-----KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKY--HSAGVNAVAFSPDCELM  308 (323)
T ss_pred             cccCcccccceEEe-----cCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhh--hhcceeEEEeCCCCchh
Confidence            54222221111111     122288899999999999999999999999999999999987  88999999999999999


Q ss_pred             EEEecCCCceeeeee
Q psy17902        424 VAGIGTEHRFGRWKT  438 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~  438 (454)
                      |++ +.|.+|.+|+.
T Consensus       309 Aaa-skD~rISLWkL  322 (323)
T KOG0322|consen  309 AAA-SKDARISLWKL  322 (323)
T ss_pred             hhc-cCCceEEeeec
Confidence            888 99999999985

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.89  E-value=1.4e-19  Score=171.85  Aligned_cols=291  Identities=28%  Similarity=0.476  Sum_probs=227.4

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEE-eCCCc-EEEEecC-
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAV-ANNNE-LVASGDN-  210 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~-~~~~~-~l~~~~~-  210 (454)
                      .+.+  |...|.++.|.+.+..++.++.|+.+.+|+..... ....+..     .+...+..+.+ ++++. +++..+. 
T Consensus        60 ~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (466)
T COG2319          60 LLRG--HEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEG-----LHDSSVSKLALSSPDGNSILLASSSL  132 (466)
T ss_pred             eeee--ccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEec-----cCCCceeeEEEECCCcceEEeccCCC
Confidence            3455  99999999999999999999999999999998876 3333331     11135666766 77777 5555444 


Q ss_pred             CCcEEEEeCC--CccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC-
Q psy17902        211 NSNIKLWSSS--LEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR-  286 (454)
Q Consensus       211 dg~v~vw~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-  286 (454)
                      ++.+.+|+..  ......+..|...|..++|+|++..+++++. ++.+++|++..+..+..+.+|...|.+++|+|++. 
T Consensus       133 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  212 (466)
T COG2319         133 DGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGL  212 (466)
T ss_pred             CccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcce
Confidence            8999999995  5888889999999999999999998888886 99999999999888888888999999999999997 


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEE--EccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCcc-ceeeecccCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLV--FNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVP-THTIPVAHGYDSSSS  362 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~  362 (454)
                      ++++++.|+.|++||...+....  +..|.... ...+ +.+..+++++.|+.+++|++..... +..+ .        .
T Consensus       213 ~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~--------~  282 (466)
T COG2319         213 LIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL-S--------G  282 (466)
T ss_pred             EEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE-e--------c
Confidence            55555999999999988666664  66676664 3344 4456888999999999999987765 3333 1        1


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |...+.++.|+|++..+++++.|+.+.+|++.............|...+..+.|.+++..++.+...|+.+.+|+.....
T Consensus       283 ~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  362 (466)
T COG2319         283 HSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK  362 (466)
T ss_pred             CCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence            34559999999988888889999999999988876665554223666799999943435666664677889888876654

>KOG0644|consensus

Probab=99.89  E-value=5.1e-23  Score=190.01  Aligned_cols=279  Identities=18%  Similarity=0.289  Sum_probs=221.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      .++.|.|  |.+.|+|+.|...|.++++|+.|..++||..++..+.....      +|.+.|+.++.+.++.++++++.|
T Consensus       182 ~ikrLlg--H~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~r------Ghs~ditdlavs~~n~~iaaaS~D  253 (1113)
T KOG0644|consen  182 NIKRLLG--HRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCR------GHSGDITDLAVSSNNTMIAAASND  253 (1113)
T ss_pred             HHHHHHh--hhhheeeeeeccccceEeecCccceeeeeeccchhhhccCC------CCccccchhccchhhhhhhhcccC
Confidence            4556778  99999999999999999999999999999999988877776      899999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-----eccCCceeEEEeecCC
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-----FGHQSAITSLDILAKN  285 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~  285 (454)
                      ..|++|.+ .+.++..+.+|++.|++|+|+|-.    +.+.||++++||.+ ...+...     ......+.++.|..++
T Consensus       254 ~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~  328 (1113)
T KOG0644|consen  254 KVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNG  328 (1113)
T ss_pred             ceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEecccc-ccccccCCCCCCcccccceeeeeccccc
Confidence            99999999 888999999999999999999854    77889999999987 1111111     1123556778888888


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      ..++|++.|+.-..|.+....     .+...+..+...  .+.+.+++-.+-.+++|++.++...+.+..         |
T Consensus       329 ~~f~Tgs~d~ea~n~e~~~l~-----~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~g---------h  394 (1113)
T KOG0644|consen  329 DRFLTGSRDGEARNHEFEQLA-----WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMG---------H  394 (1113)
T ss_pred             cccccccCCcccccchhhHhh-----hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcc---------c
Confidence            899999999998888765321     111111111111  124566677788899999999988887764         4


Q ss_pred             CCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        364 PNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       364 ~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ...+..+.++|-.. ...+++.||...|||+-.|.+++....  ..+.+....||+||..++.. .+-|.+++.....
T Consensus       395 sd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~--gh~kl~d~kFSqdgts~~ls-d~hgql~i~g~gq  469 (1113)
T KOG0644|consen  395 SDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFI--GHGKLVDGKFSQDGTSIALS-DDHGQLYILGTGQ  469 (1113)
T ss_pred             ccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeec--ccceeeccccCCCCceEecC-CCCCceEEeccCC
Confidence            45588999999554 666889999999999999988877663  35677888999999999988 7788888876544

>KOG2096|consensus

Probab=99.88  E-value=2.2e-20  Score=154.48  Aligned_cols=244  Identities=19%  Similarity=0.256  Sum_probs=182.2

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCce-ecccCCc-----ccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902        143 ASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSK-VCSSPFV-----KTDRKSYPPILALAVANNNELVASGDNNSNIK  215 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~-~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~  215 (454)
                      +..+.++|+||-+-++... ...++++|.+...+. -..++..     .....|...|..+-...++.+|++++.|..|.
T Consensus       133 dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~  212 (420)
T KOG2096|consen  133 DHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKIC  212 (420)
T ss_pred             CCceEEEECCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEE
Confidence            3568899999976655554 446899997653221 0011111     11235666788888888999999999999999


Q ss_pred             EEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---Cc-----eeEEEeeccCCceeEEEeecCCCE
Q psy17902        216 LWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DR-----AYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       216 vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~-----~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      +|++.++.+..+......-+..+.+|+|+++++++..-.|++|.+-   .|     ..+..+.+|.+.|..++|+++...
T Consensus       213 lw~lkGq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r  292 (420)
T KOG2096|consen  213 LWDLKGQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTR  292 (420)
T ss_pred             EEecCCceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcce
Confidence            9999999999988877788889999999999999999999999862   22     234567899999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeE-------E------EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecc
Q psy17902        288 ISSGGTDKSVRVWKIQEESQ-------L------VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~-------~------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                      +++.+.||+++|||..-.-.       +      .......++.....|+++ +++.+....+.+|..++++....+...
T Consensus       293 ~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~-~lA~s~gs~l~~~~se~g~~~~~~e~~  371 (420)
T KOG2096|consen  293 AVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD-SLAVSFGSDLKVFASEDGKDYPELEDI  371 (420)
T ss_pred             eEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc-EEEeecCCceEEEEcccCccchhHHHh
Confidence            99999999999999753211       1      111122345444455555 445566778999999988877766654


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      +        ...|++++|+++|+++++++ |..++++.-..+
T Consensus       372 h--------~~~Is~is~~~~g~~~atcG-dr~vrv~~ntpg  404 (420)
T KOG2096|consen  372 H--------STTISSISYSSDGKYIATCG-DRYVRVIRNTPG  404 (420)
T ss_pred             h--------cCceeeEEecCCCcEEeeec-ceeeeeecCCCc
Confidence            4        44599999999999999987 678888864443

>KOG1517|consensus

Probab=99.88  E-value=2.6e-20  Score=176.53  Aligned_cols=291  Identities=16%  Similarity=0.260  Sum_probs=209.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~v~vw~  218 (454)
                      ...+-..+.|+|-...++++...-.|+|||.+.+.....+....   .....|+.+.+-.  |..++++|+.||.|+||+
T Consensus      1063 n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~---~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk 1139 (1387)
T KOG1517|consen 1063 NNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGA---FPDTRVSDLELINEQDDALLLTASSDGVIRIWK 1139 (1387)
T ss_pred             CCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCC---CCCCccceeeeecccchhheeeeccCceEEEec
Confidence            44466778899988899999888899999999988876665422   2445788888865  456899999999999998


Q ss_pred             C--CC-c---cEEeec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEee-c
Q psy17902        219 S--SL-E---HLHTFT-------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDIL-A  283 (454)
Q Consensus       219 ~--~~-~---~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~-~  283 (454)
                      -  .. +   .+..+.       +..+.-.-+.|.....+|+++|.-..|+|||.....++..+. +....|+++.-+ +
T Consensus      1140 ~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~ 1219 (1387)
T KOG1517|consen 1140 DYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLV 1219 (1387)
T ss_pred             ccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeeccccc
Confidence            6  22 1   122111       111222456788877778877778899999999887776653 455667777665 3


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE----EEccccCC--eEEEEecC-C-CEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL----VFNGHSRG--IDMTRRVN-D-QQFITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~--i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      .|+.|++|..||.|++||.+....-    .+..|...  |..+.+.. + ..|++|+.+|.|++||++.......+....
T Consensus      1220 ~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~ 1299 (1387)
T KOG1517|consen 1220 HGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVA 1299 (1387)
T ss_pred             CCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeee
Confidence            4699999999999999999875442    66667665  65555554 2 359999999999999999853222222211


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-----CCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-----PLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      ...    -....+++..+++..++|+|+. +.|+||++.. +.+..+...     ...+.+.+++|+|..-.||+| ..|
T Consensus      1300 ~~~----yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG-~~D 1372 (1387)
T KOG1517|consen 1300 HWE----YGSALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAG-SAD 1372 (1387)
T ss_pred             ccc----cCccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeeecchhHhhhhc-cCC
Confidence            000    0113899999999999999998 8999999864 333333221     234668999999998888888 899


Q ss_pred             CceeeeeeeCC
Q psy17902        431 HRFGRWKTIKG  441 (454)
Q Consensus       431 ~~i~~W~~~~~  441 (454)
                      ..|.+|...++
T Consensus      1373 s~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1373 STVSIYSCEKP 1383 (1387)
T ss_pred             ceEEEeecCCc
Confidence            99999987654

>KOG1445|consensus

Probab=99.88  E-value=4.8e-21  Score=172.12  Aligned_cols=171  Identities=12%  Similarity=0.137  Sum_probs=128.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .+..+.+  |.+.|+.+.|+| ...+||+|+.|..|+||.+..+.............+..-.|-++.|+|...-|+..+.
T Consensus        71 ~i~~l~~--H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a  148 (1012)
T KOG1445|consen   71 DIGILAA--HGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGA  148 (1012)
T ss_pred             ccceeec--ccceeeccCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEecc
Confidence            4556777  999999999999 4568999999999999999844332221111112234557889999997655555556


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-ceeEEEeeccCCc-eeEEEeecCCCE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-RAYVETLFGHQSA-ITSLDILAKNRV  287 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~-v~~~~~~~~~~~  287 (454)
                      .|.++|||+ +.+.+..+.+|...|.++.|+.||.+|++++.|..|+|||.+. ++.++...+|.+. =..+.|.-+-..
T Consensus       149 ~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~llatscKdkqirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~r  228 (1012)
T KOG1445|consen  149 HGSVYITDISTQKTAVELSGHTDKVQSADWSEDGKLLATSCKDKQIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWER  228 (1012)
T ss_pred             CceEEEEEcccCceeecccCCchhhhccccccCCceEeeecCCcceEEeCCccCCCccccccccccchhheeeeccchhh
Confidence            799999999 7788889999999999999999999999999999999999875 4667777777653 134666544445


Q ss_pred             EEEeeCC----CcEEEeeccC
Q psy17902        288 ISSGGTD----KSVRVWKIQE  304 (454)
Q Consensus       288 l~~~~~d----g~i~i~d~~~  304 (454)
                      |++.+.+    ..|++||.+.
T Consensus       229 lisTGF~~~R~reV~~~Dtr~  249 (1012)
T KOG1445|consen  229 LISTGFTTKRIREVRAYDTRK  249 (1012)
T ss_pred             hhhcccchhhheeeeeeeccc
Confidence            6555544    4678888763

>KOG1034|consensus

Probab=99.88  E-value=3.2e-21  Score=160.04  Aligned_cols=274  Identities=16%  Similarity=0.250  Sum_probs=201.4

Q ss_pred             hhhhhhhcCcEeeeehhhhccCc-eeEeEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCC
Q psy17902        108 ETVVLEQEGKLRVNIADRLANAT-VVCTKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPF  182 (454)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  182 (454)
                      +..+.+..|.-...+.+...... ..++.+....|...-+.++|+-+    ..+||+|+.-|.|+|.|+.+++....+. 
T Consensus        54 e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~-  132 (385)
T KOG1034|consen   54 EPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYR-  132 (385)
T ss_pred             CCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhcccee-
Confidence            34455555665555554443332 24555555558888899999754    4589999999999999999888776665 


Q ss_pred             cccCCCCCCceEEEEEeCCC-cEEEEecCCCcEEEEeC-CCccEEee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy17902        183 VKTDRKSYPPILALAVANNN-ELVASGDNNSNIKLWSS-SLEHLHTF---TGHKAPITGLAISFECDTLYSSSNDRSIKV  257 (454)
Q Consensus       183 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~-~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  257 (454)
                           +|...|+.+.+.|+. ++|++++.|..|++|++ +..++..+   .+|.+.|.++.|++++.+|++++.|.+|++
T Consensus       133 -----ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~  207 (385)
T KOG1034|consen  133 -----GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKL  207 (385)
T ss_pred             -----ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEE
Confidence                 799999999999964 78999999999999999 66666665   579999999999999999999999999999


Q ss_pred             EeCCCcee-------------------------EE---EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc-CCeE-
Q psy17902        258 WNIEDRAY-------------------------VE---TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-EESQ-  307 (454)
Q Consensus       258 wd~~~~~~-------------------------~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~-  307 (454)
                      |++...+.                         ..   +-.-|...|-|+.|.  |+++++-+-++.|..|..- -... 
T Consensus       208 W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~  285 (385)
T KOG1034|consen  208 WRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESI  285 (385)
T ss_pred             EecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhh
Confidence            99973211                         00   112477777888885  6899998999999999872 1111 


Q ss_pred             ---------E----EEccccCCeEEEEec---CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        308 ---------L----VFNGHSRGIDMTRRV---NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       308 ---------~----~~~~~~~~i~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                               .    .+.-....+..+.+.   -...|+.|...|.|.+||+....+...-...+..     ....|...+
T Consensus       286 ~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~-----~~~tVRQ~s  360 (385)
T KOG1034|consen  286 HNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSK-----SGSTVRQTS  360 (385)
T ss_pred             hccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEecc-----ccceeeeee
Confidence                     0    122222223233322   3567889999999999999988775332222222     244599999


Q ss_pred             EecCCCEEEEecCCCcEEEEEcC
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      |+.+|.+|+....|++|.-||..
T Consensus       361 fS~dgs~lv~vcdd~~Vwrwdrv  383 (385)
T KOG1034|consen  361 FSRDGSILVLVCDDGTVWRWDRV  383 (385)
T ss_pred             ecccCcEEEEEeCCCcEEEEEee
Confidence            99999999999999999999864

>KOG0303|consensus

Probab=99.88  E-value=2.3e-20  Score=158.59  Aligned_cols=226  Identities=16%  Similarity=0.252  Sum_probs=174.1

Q ss_pred             CCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC-C-------CccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEE
Q psy17902        187 RKSYPPILALAVAN-NNELVASGDNNSNIKLWSS-S-------LEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIK  256 (454)
Q Consensus       187 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~-~-------~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~  256 (454)
                      .+|.++|..++|+| +...||+|+.|.+|.||.+ .       ..++..+.+|...|--++|+|. .+.|++++.|.+|.
T Consensus        78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~  157 (472)
T KOG0303|consen   78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS  157 (472)
T ss_pred             cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence            48999999999999 5678999999999999998 2       2456788999999999999995 47899999999999


Q ss_pred             EEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE-EccccC--CeEEEEecCCCEEEEEe-
Q psy17902        257 VWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV-FNGHSR--GIDMTRRVNDQQFITCG-  332 (454)
Q Consensus       257 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~--~i~~~~~~~~~~l~~~~-  332 (454)
                      +||+.+++.+.++. |...|.+++|+.+|.+|++++.|..|+|||.++++.+. -.+|.+  ....++..++..+-+|- 
T Consensus       158 iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfs  236 (472)
T KOG0303|consen  158 IWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFS  236 (472)
T ss_pred             EEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccc
Confidence            99999999888886 99999999999999999999999999999999999883 345554  34566666777444443 


Q ss_pred             --CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE-EecCCCcEEEEEcCCCce-eeEeccCCCc
Q psy17902        333 --EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA-SGSYDGCVKLWKITPKRT-LEFLQDIPLS  408 (454)
Q Consensus       333 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~v~iwd~~~~~~-~~~~~~~~~~  408 (454)
                        ++..+-+||..+......+....       ..+.|.---|.++..+|+ +|-.|+.|+.|.+....+ +..+......
T Consensus       237 r~seRq~aLwdp~nl~eP~~~~elD-------tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~  309 (472)
T KOG0303|consen  237 RMSERQIALWDPNNLEEPIALQELD-------TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSK  309 (472)
T ss_pred             cccccceeccCcccccCcceeEEec-------cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccC
Confidence              57889999976543221111111       122266667788888654 556799999999987643 4445544455


Q ss_pred             eeeeEEEEcCCC
Q psy17902        409 GVINSLVFTSDH  420 (454)
Q Consensus       409 ~~v~~l~~s~d~  420 (454)
                      .+-..+.|-|..
T Consensus       310 epQRG~g~mPKR  321 (472)
T KOG0303|consen  310 EPQRGMGFMPKR  321 (472)
T ss_pred             Cccccccccccc
Confidence            666778888754

>KOG4328|consensus

Probab=99.88  E-value=5.6e-21  Score=165.30  Aligned_cols=249  Identities=14%  Similarity=0.127  Sum_probs=186.7

Q ss_pred             EeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ...|..  |.++|.+|.|+|. ...+++.+.||+|++-|+++......+..    ......+..+.|+.+...+++|..-
T Consensus       227 v~~f~~--hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~----~~d~~~fs~~d~~~e~~~vl~~~~~  300 (498)
T KOG4328|consen  227 VYLFTP--HSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSL----DTDNIWFSSLDFSAESRSVLFGDNV  300 (498)
T ss_pred             eEEecc--CCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhc----CccceeeeeccccCCCccEEEeecc
Confidence            334445  9999999999994 57899999999999999987544332221    1234467788898888888888888


Q ss_pred             CcEEEEeC--CCccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCcee----EEEeeccCCceeEEEeecC
Q psy17902        212 SNIKLWSS--SLEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAY----VETLFGHQSAITSLDILAK  284 (454)
Q Consensus       212 g~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~  284 (454)
                      |.+.+||+  .+.....+..|...|++++++|- ..+|++++.|++++|||++....    +.....|...|.+..|+|.
T Consensus       301 G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs  380 (498)
T KOG4328|consen  301 GNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPS  380 (498)
T ss_pred             cceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCC
Confidence            89999998  55557777889999999999995 46889999999999999975422    2334479999999999999


Q ss_pred             CCEEEEeeCCCcEEEeecc----CCeEEEEcc-------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        285 NRVISSGGTDKSVRVWKIQ----EESQLVFNG-------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~----~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      +..|++.+.|..|+|||..    .........       +-..+...+-++.+++++|-.-..|-|||-..++.+..+..
T Consensus       381 ~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~  460 (498)
T KOG4328|consen  381 GGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHD  460 (498)
T ss_pred             CCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccC
Confidence            8789999999999999984    222222222       23345677777888999999989999999988887776543


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcC
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKIT  394 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~  394 (454)
                      ....       .-..-..|+|-+. +++.++..|.|+||--.
T Consensus       461 P~~~-------tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k  495 (498)
T KOG4328|consen  461 PESS-------TIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK  495 (498)
T ss_pred             cccc-------ccccceeecccccceeccCCccceEEEEecC
Confidence            3211       1123357999888 55555567888888643

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.87  E-value=6.2e-19  Score=160.80  Aligned_cols=275  Identities=12%  Similarity=0.163  Sum_probs=178.3

Q ss_pred             EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCC-CccEEee--cccCCC
Q psy17902        158 YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSS-LEHLHTF--TGHKAP  233 (454)
Q Consensus       158 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~-~~~~~~~--~~~~~~  233 (454)
                      ++...++.|.+|++.+...+..+...    ........++++|++++|++++ .++.|.+|+++ ...+...  ....+.
T Consensus         6 ~~~~~~~~I~~~~~~~~g~l~~~~~~----~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~   81 (330)
T PRK11028          6 IASPESQQIHVWNLNHEGALTLLQVV----DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGS   81 (330)
T ss_pred             EEcCCCCCEEEEEECCCCceeeeeEE----ecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCC
Confidence            33467899999999643221111111    1234567889999999887764 47899999984 2222211  123345


Q ss_pred             eEEEEEcCCCCEEEEEeC-CCcEEEEeCCC-c---eeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEeeccCCeE
Q psy17902        234 ITGLAISFECDTLYSSSN-DRSIKVWNIED-R---AYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQ  307 (454)
Q Consensus       234 v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~  307 (454)
                      ...++|+|++++|++++. ++.|.+|++.+ +   ..+..+. +.....+++++|+++++++++ .++.|.+||+.+...
T Consensus        82 p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~  160 (330)
T PRK11028         82 PTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGH  160 (330)
T ss_pred             ceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCc
Confidence            678999999999888764 88999999964 2   2222222 334467788999998886554 568999999976332


Q ss_pred             E--------EEccccCCeEEEEecCCCEEEEEeC-CCCEEEEecCC--Cc--cceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        308 L--------VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSILK--KV--PTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       308 ~--------~~~~~~~~i~~~~~~~~~~l~~~~~-dg~i~iwd~~~--~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      +        .......+-.+.+.+++.+++++.. ++.|.+|++..  +.  .+..+....   .......+...+.++|
T Consensus       161 l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~i~~~p  237 (330)
T PRK11028        161 LVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMP---ADFSDTRWAADIHITP  237 (330)
T ss_pred             ccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCC---CcCCCCccceeEEECC
Confidence            2        1112223334555667777777765 89999999974  22  222222110   0001233456799999


Q ss_pred             CCCEEEEecC-CCcEEEEEcCCCc-eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        375 NSDLVASGSY-DGCVKLWKITPKR-TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       375 ~~~~l~~~~~-dg~v~iwd~~~~~-~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ++++|+++.. ++.|.+|++.... .+..+...........+.|+|||++|+++...++.|.+|....
T Consensus       238 dg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~  305 (330)
T PRK11028        238 DGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDG  305 (330)
T ss_pred             CCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcC
Confidence            9999888854 7899999996542 2222222112234568999999999999966799999998753

>KOG0642|consensus

Probab=99.87  E-value=1.9e-21  Score=172.48  Aligned_cols=249  Identities=20%  Similarity=0.304  Sum_probs=188.0

Q ss_pred             cCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---------CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy17902        185 TDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---------SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI  255 (454)
Q Consensus       185 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  255 (454)
                      +...|...|..++|.+....|++++.||.+.+|++         ...++.+|.+|.++|.|+++.+++.++++|+.||+|
T Consensus       289 tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I  368 (577)
T KOG0642|consen  289 TLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTI  368 (577)
T ss_pred             eeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCcee
Confidence            33467888999999999999999999999999998         235678999999999999999999999999999999


Q ss_pred             EEEeCCCc----------eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc---cCCeEEEEe
Q psy17902        256 KVWNIEDR----------AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH---SRGIDMTRR  322 (454)
Q Consensus       256 ~iwd~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~i~~~~~  322 (454)
                      +.|++...          .....+.||...|+.+++++....|++++.||+++.|+........+...   ..+.. +.+
T Consensus       369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~~~f~~~~e~g~Pls-vd~  447 (577)
T KOG0642|consen  369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESPCTFGEPKEHGYPLS-VDR  447 (577)
T ss_pred             eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCccccCCccccCCcce-Eee
Confidence            99966421          22346679999999999999999999999999999999887666433222   22222 222


Q ss_pred             cCC--CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee
Q psy17902        323 VND--QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       323 ~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                      ...  ...++...-+.-.++++.....+..+.....  ........+..+.++|.+.+.+++..|+.|+++|..++.++.
T Consensus       448 ~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~--~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~  525 (577)
T KOG0642|consen  448 TSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSAS--PGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILH  525 (577)
T ss_pred             ccchhHhhhhhcccccccchhhhhhhheeeccccCC--CcccccCccceEEecCCCCeeEecccCCceecccccccccch
Confidence            211  1222222333333344433333333322111  111123448889999999999999999999999999998887


Q ss_pred             EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ....  |...++++++.|+|.+|+++ +.|+.+++|+..
T Consensus       526 s~~a--~~~svtslai~~ng~~l~s~-s~d~sv~l~kld  561 (577)
T KOG0642|consen  526 SMVA--HKDSVTSLAIDPNGPYLMSG-SHDGSVRLWKLD  561 (577)
T ss_pred             heee--ccceecceeecCCCceEEee-cCCceeehhhcc
Confidence            7765  88899999999999999999 899999999873

>KOG0642|consensus

Probab=99.87  E-value=1.4e-21  Score=173.45  Aligned_cols=255  Identities=21%  Similarity=0.247  Sum_probs=187.6

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      ++..  |.+.|..++|+|....|++++.||.|.+|+++...  ....+....+..+|.++|.|+++.+++..+++|+-||
T Consensus       289 tl~s--~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg  366 (577)
T KOG0642|consen  289 TLRS--HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDG  366 (577)
T ss_pred             eeec--chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCc
Confidence            5566  99999999999999999999999999999994311  1122223344568999999999999999999999999


Q ss_pred             cEEEEeCC--C---------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec--cCCceeEE
Q psy17902        213 NIKLWSSS--L---------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG--HQSAITSL  279 (454)
Q Consensus       213 ~v~vw~~~--~---------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~  279 (454)
                      +|+.|++.  .         .....+.+|.+.|+.+++++....|++++.||+++.|+...... .++..  -.+...++
T Consensus       367 ~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsv  445 (577)
T KOG0642|consen  367 TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSV  445 (577)
T ss_pred             eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceE
Confidence            99999761  1         22346789999999999999999999999999999999876655 33322  12233556


Q ss_pred             EeecCC-CEEEEeeCCCcEEEeeccCCeEEEEccc---------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        280 DILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGH---------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       280 ~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      .+.... .+.++...-+.-.++++.....+.+...         ......+..+...+.+++..|+.|+++|..++.+++
T Consensus       446 d~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~  525 (577)
T KOG0642|consen  446 DRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILH  525 (577)
T ss_pred             eeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccch
Confidence            654333 2333333333334444444443322211         112234555567888999999999999999999998


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      ....         |...++++++.|+|.+|++|+.||.|++|.+....++..
T Consensus       526 s~~a---------~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~e  568 (577)
T KOG0642|consen  526 SMVA---------HKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLE  568 (577)
T ss_pred             heee---------ccceecceeecCCCceEEeecCCceeehhhccchheeec
Confidence            8765         444599999999999999999999999999876544433

>KOG1587|consensus

Probab=99.87  E-value=1.3e-19  Score=168.84  Aligned_cols=258  Identities=19%  Similarity=0.269  Sum_probs=185.7

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeCCCccE-------EeecccCCCeE
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSSSLEHL-------HTFTGHKAPIT  235 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~~~~~-------~~~~~~~~~v~  235 (454)
                      +.+.||++......... +     .....|.|+.|+| +..+||.|+.+|.|.+||+.....       .....|..+++
T Consensus       222 ~~~~vW~~~~p~~Pe~~-~-----~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~  295 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELV-L-----ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVT  295 (555)
T ss_pred             ceEEEEecCCCCCceEE-E-----ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeE
Confidence            57999999876222211 1     2556899999999 567888889999999999932221       12346899999


Q ss_pred             EEEEcCCCC--EEEEEeCCCcEEEEeCCCceeE------EEee------ccCCceeEEEeecCC-CEEEEeeCCCcEEEe
Q psy17902        236 GLAISFECD--TLYSSSNDRSIKVWNIEDRAYV------ETLF------GHQSAITSLDILAKN-RVISSGGTDKSVRVW  300 (454)
Q Consensus       236 ~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~------~~~~------~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~  300 (454)
                      .+.|..+..  -|++++.||.|..|+++.-...      ....      .....++++.|.+.. +.+++|+..|.|..-
T Consensus       296 ~vvW~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~  375 (555)
T KOG1587|consen  296 AVVWLQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKG  375 (555)
T ss_pred             EEEEeccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEE
Confidence            999976544  4999999999999988754321      0111      123457899998765 678889999988773


Q ss_pred             e---ccCCe------EEEEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEE
Q psy17902        301 K---IQEES------QLVFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       301 d---~~~~~------~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +   .+...      ...+..|.+++.++.+++  ...|++++ |.+++||... ...++..+..         +...++
T Consensus       376 ~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~---------~~~~v~  445 (555)
T KOG1587|consen  376 CRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDS---------SPDYVT  445 (555)
T ss_pred             eccCCcccccccccccccccccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhh---------ccceee
Confidence            3   23222      125566778888887765  33455555 9999999987 6666666554         234499


Q ss_pred             EEEEecCCC-EEEEecCCCcEEEEEcCCC--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        369 SVACLHNSD-LVASGSYDGCVKLWKITPK--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       369 ~~~~s~~~~-~l~~~~~dg~v~iwd~~~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +++|||... +|+++..||.|.+||+...  .++.....  .....+.+.|+++|+.|++| +..|.+.+|++..
T Consensus       446 ~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~--~~~~l~~~~~s~~g~~lavG-d~~G~~~~~~l~~  517 (555)
T KOG1587|consen  446 DVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLSQKV--CSPALTRVRWSPNGKLLAVG-DANGTTHILKLSE  517 (555)
T ss_pred             eeEEcCcCceEEEEEcCCCceehhhhhccccCCcccccc--cccccceeecCCCCcEEEEe-cCCCcEEEEEcCc
Confidence            999999775 8888999999999999765  33333332  45567788899999999999 8999999999853

>KOG0650|consensus

Probab=99.87  E-value=2.8e-20  Score=166.09  Aligned_cols=238  Identities=15%  Similarity=0.229  Sum_probs=184.9

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCc-
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDR-  263 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~-  263 (454)
                      .+|.+.|.+|...|.|.+|++|+.||+|+||.+ ++.++.++. ..+.|.|++|+|.+.. ++++.....+.|.+..-| 
T Consensus       397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~  475 (733)
T KOG0650|consen  397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGD  475 (733)
T ss_pred             eccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEEeCccccc
Confidence            579999999999999999999999999999999 888888776 4568999999997642 333333333444443211 


Q ss_pred             ------------------------------------eeEEEeeccCCceeEEEeecCCCEEEEeeCC---CcEEEeeccC
Q psy17902        264 ------------------------------------AYVETLFGHQSAITSLDILAKNRVISSGGTD---KSVRVWKIQE  304 (454)
Q Consensus       264 ------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~  304 (454)
                                                          .-+.....|...|+.+.|+..|.||++...+   ..|.|+++..
T Consensus       476 ~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK  555 (733)
T KOG0650|consen  476 RLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK  555 (733)
T ss_pred             hhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccc
Confidence                                                0122334588899999999999999987654   4789999987


Q ss_pred             CeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        305 ESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       305 ~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      .... .|....+.+.++.|++..-.+..+....|+|||+.....+..+...         ..||..++.+|.|.-|+.|+
T Consensus       556 ~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~tg---------~kwiS~msihp~GDnli~gs  626 (733)
T KOG0650|consen  556 RKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLTG---------SKWISSMSIHPNGDNLILGS  626 (733)
T ss_pred             ccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhcC---------CeeeeeeeecCCCCeEEEec
Confidence            6555 5556666777777776654444455678999999887777666532         34599999999999999999


Q ss_pred             CCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        384 YDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       384 ~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .|+.+..||+.-. ++.+.+..  |...+++++|++.-.+++++ ++||.+.++-
T Consensus       627 ~d~k~~WfDldlsskPyk~lr~--H~~avr~Va~H~ryPLfas~-sdDgtv~Vfh  678 (733)
T KOG0650|consen  627 YDKKMCWFDLDLSSKPYKTLRL--HEKAVRSVAFHKRYPLFASG-SDDGTVIVFH  678 (733)
T ss_pred             CCCeeEEEEcccCcchhHHhhh--hhhhhhhhhhccccceeeee-cCCCcEEEEe
Confidence            9999999999765 67777775  88999999999998888888 8899998874

>KOG2919|consensus

Probab=99.86  E-value=3.6e-20  Score=153.58  Aligned_cols=233  Identities=17%  Similarity=0.202  Sum_probs=179.3

Q ss_pred             CCCeEEEEEc-------CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        142 RASITCIAVT-------SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       142 ~~~V~~~~~s-------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      ...|+..+|-       |+.+++|+.+.+.-|.+||.-+++....+...... .......+++|+|||.+|++|. ...|
T Consensus       104 g~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~-de~taAhsL~Fs~DGeqlfaGy-krci  181 (406)
T KOG2919|consen  104 GETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQ-DEYTAAHSLQFSPDGEQLFAGY-KRCI  181 (406)
T ss_pred             CCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhH-HhhhhheeEEecCCCCeEeecc-cceE
Confidence            3567777774       67889999999999999999998877665432211 1123567899999999999887 5789


Q ss_pred             EEEeC--CCcc--EEee-----cccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        215 KLWSS--SLEH--LHTF-----TGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       215 ~vw~~--~~~~--~~~~-----~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      ++||+  .+..  +...     .+..+.|.+++|+|. .+.++.|+....+-||.-..+.++..+.+|.+.|+.+.|.++
T Consensus       182 rvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~ed  261 (406)
T KOG2919|consen  182 RVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCED  261 (406)
T ss_pred             EEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccC
Confidence            99998  2222  2222     234678999999995 458999999999999998889999999999999999999999


Q ss_pred             CCEEEEeeC-CCcEEEeeccCCeEE--EEccccC----CeEEEEecCCCEEEEEeCCCCEEEEecCC-CccceeeecccC
Q psy17902        285 NRVISSGGT-DKSVRVWKIQEESQL--VFNGHSR----GIDMTRRVNDQQFITCGEDGTLSLWSILK-KVPTHTIPVAHG  356 (454)
Q Consensus       285 ~~~l~~~~~-dg~i~i~d~~~~~~~--~~~~~~~----~i~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~  356 (454)
                      |+.|++|.. +-.|..||++.....  .+..|..    .|..-.-+.++.|++|+.||.|++||+.. +..+..+..   
T Consensus       262 Gn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~---  338 (406)
T KOG2919|consen  262 GNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGN---  338 (406)
T ss_pred             cCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccccc---
Confidence            999999875 678999999986655  3444443    33344445788999999999999999987 554554443   


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                            +...++.++++|--.++|+++..
T Consensus       339 ------~sd~vNgvslnP~mpilatssGq  361 (406)
T KOG2919|consen  339 ------YSDTVNGVSLNPIMPILATSSGQ  361 (406)
T ss_pred             ------ccccccceecCcccceeeeccCc
Confidence                  34448999999998888888755

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.86  E-value=9.1e-18  Score=159.41  Aligned_cols=287  Identities=28%  Similarity=0.499  Sum_probs=222.9

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEe
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASG  208 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~  208 (454)
                      .....+.+  |...|.+++|+|++.++++++. ++.+++|++........+.      .|...|.+++|+|++. +++++
T Consensus       146 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~  217 (466)
T COG2319         146 KLIRTLEG--HSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLA------GHTDPVSSLAFSPDGGLLIASG  217 (466)
T ss_pred             eEEEEEec--CcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeec------cCCCceEEEEEcCCcceEEEEe
Confidence            45566777  9999999999999999998885 9999999999865555554      4888999999999998 55555


Q ss_pred             cCCCcEEEEeCC-CccEE-eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-EEEeeccCCceeEEEeecCC
Q psy17902        209 DNNSNIKLWSSS-LEHLH-TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-VETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       209 ~~dg~v~vw~~~-~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~  285 (454)
                      +.|+.|++|+.. +..+. .+..|.... ...|++++.++++++.|+.+++|++..... +..+.+|...|.++.|.|++
T Consensus       218 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  296 (466)
T COG2319         218 SSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDG  296 (466)
T ss_pred             cCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCC
Confidence            899999999984 55555 588888875 448999998999999999999999987664 44446789999999999988


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE-EEc--cccCCeEEEEecCC-CEEEEE-eCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL-VFN--GHSRGIDMTRRVND-QQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~--~~~~~i~~~~~~~~-~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      ..+++++.|+.+.+|++.+.... ...  .|...+..+.+.++ ..++.+ ..|+.+.+|++...........       
T Consensus       297 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-------  369 (466)
T COG2319         297 KLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEG-------  369 (466)
T ss_pred             CEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEecC-------
Confidence            88888999999999999887766 222  56665666655322 455555 6889999999988762222211       


Q ss_pred             CCCCCcEEEEEEecCCCEEEE-ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        361 SSEPNWITSVACLHNSDLVAS-GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                         ...+..+.+++ ...++. +..++.+.+|+.............  ...+..+.+++++..++.+ +.++.+.+|+..
T Consensus       370 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  442 (466)
T COG2319         370 ---HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGH--TSRVTSLDFSPDGKSLASG-SSDNTIRLWDLK  442 (466)
T ss_pred             ---CceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCC--CCcEEEEEECCCCcEEEEe-cCCCcEEEEecc
Confidence               11178888888 543444 688999999999887666655532  1789999999999999986 899999999987


Q ss_pred             C
Q psy17902        440 K  440 (454)
Q Consensus       440 ~  440 (454)
                      .
T Consensus       443 ~  443 (466)
T COG2319         443 T  443 (466)
T ss_pred             C
Confidence            6

>KOG1310|consensus

Probab=99.86  E-value=3.9e-20  Score=163.69  Aligned_cols=165  Identities=20%  Similarity=0.324  Sum_probs=136.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  209 (454)
                      ..+.|.|  |++.|+|+.|+.+|.+|++|+.|-.+.|||.-..+..+.+..     +|...|.++.|-|  +.+++++|.
T Consensus        42 lE~eL~G--H~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~T-----gHtaNIFsvKFvP~tnnriv~sgA  114 (758)
T KOG1310|consen   42 LEAELTG--HTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIST-----GHTANIFSVKFVPYTNNRIVLSGA  114 (758)
T ss_pred             hhhhhcc--ccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeec-----ccccceeEEeeeccCCCeEEEecc
Confidence            3456788  999999999999999999999999999999988887777765     8999999999998  567899999


Q ss_pred             CCCcEEEEeCCC-----------ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeE----------E
Q psy17902        210 NNSNIKLWSSSL-----------EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYV----------E  267 (454)
Q Consensus       210 ~dg~v~vw~~~~-----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~----------~  267 (454)
                      .|..|+++|++.           .....+..|...|..|+..|++ +.+.+++.||+|+-+|++.....          .
T Consensus       115 gDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~  194 (758)
T KOG1310|consen  115 GDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILV  194 (758)
T ss_pred             CcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHH
Confidence            999999999842           2344567899999999999988 88999999999999999863211          1


Q ss_pred             EeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeecc
Q psy17902        268 TLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       268 ~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~  303 (454)
                      .+...--...|+.++|.. .+|++|+.|-..++||.+
T Consensus       195 ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~R  231 (758)
T KOG1310|consen  195 NYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR  231 (758)
T ss_pred             HhchhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence            111222346789999876 689999999999999954

>KOG0649|consensus

Probab=99.86  E-value=2.4e-19  Score=142.98  Aligned_cols=235  Identities=17%  Similarity=0.259  Sum_probs=180.7

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCC-----------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSS-----------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI  260 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~  260 (454)
                      .|.+-+++|.+++|++|+.+|.|.++.++           ...+..+++|.++|+.++|.  ..+|++|+ ||.|+-|..
T Consensus        12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W   88 (325)
T KOG0649|consen   12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW   88 (325)
T ss_pred             HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence            46677899999999999999999999872           12345668999999999998  34677765 499999987


Q ss_pred             CCcee------EEEe--e-----ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEe-cCC
Q psy17902        261 EDRAY------VETL--F-----GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRR-VND  325 (454)
Q Consensus       261 ~~~~~------~~~~--~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~-~~~  325 (454)
                      +....      +...  .     ..-..|+++...|..+-++.++.|+.++.||+.+++.. .+.+|...+.++.. ...
T Consensus        89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~  168 (325)
T KOG0649|consen   89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNAN  168 (325)
T ss_pred             hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccC
Confidence            54321      1011  1     12245889999998877777889999999999999987 89999999998887 456


Q ss_pred             CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC-CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        326 QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS-EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      ..+++|+.||++++||.++++.+..+..........+ -..||.+++.+.  .+|++|+.- .+.+|++.+..+...+. 
T Consensus       169 ~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~e--dWlvCGgGp-~lslwhLrsse~t~vfp-  244 (325)
T KOG0649|consen  169 GQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNE--DWLVCGGGP-KLSLWHLRSSESTCVFP-  244 (325)
T ss_pred             cceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccC--ceEEecCCC-ceeEEeccCCCceEEEe-
Confidence            7899999999999999999999988876544333332 345788887754  489888764 69999999988888776 


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                        ..+++..+.|-.|  .++++ |..+.|.-|..
T Consensus       245 --ipa~v~~v~F~~d--~vl~~-G~g~~v~~~~l  273 (325)
T KOG0649|consen  245 --IPARVHLVDFVDD--CVLIG-GEGNHVQSYTL  273 (325)
T ss_pred             --cccceeEeeeecc--eEEEe-ccccceeeeee
Confidence              5677888899744  55555 66767777754

>KOG1538|consensus

Probab=99.86  E-value=2.8e-20  Score=168.20  Aligned_cols=241  Identities=18%  Similarity=0.241  Sum_probs=185.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..++++|  |.+.|+|++|+.||..+|+|+.|..|.+|+..-...   +..     .|...|.||.|+|-.+.|++++. 
T Consensus        45 llqtLKg--HKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~---LkY-----SH~D~IQCMsFNP~~h~LasCsL-  113 (1081)
T KOG1538|consen   45 LLQPLKG--HKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGI---LKY-----SHNDAIQCMSFNPITHQLASCSL-  113 (1081)
T ss_pred             ccccccc--ccceEEEEEEccCCceeccCCCceeEEEecccccce---eee-----ccCCeeeEeecCchHHHhhhcch-
Confidence            5678889  999999999999999999999999999997553222   222     58899999999999999999886 


Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE--EeeccCCceeEEEeecCC----
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE--TLFGHQSAITSLDILAKN----  285 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~----  285 (454)
                      ...-+|....+.+...+ ....|.+++|..||++|+.|-.+|+|.+-+-.....+.  .--+..++|.+++|+|..    
T Consensus       114 sdFglWS~~qK~V~K~k-ss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~  192 (1081)
T KOG1538|consen  114 SDFGLWSPEQKSVSKHK-SSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGR  192 (1081)
T ss_pred             hhccccChhhhhHHhhh-hheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCc
Confidence            35778987555554443 34678899999999999999999999998755333332  223577899999999863    


Q ss_pred             -CEEEEeeCCCcEEEeeccCCeEEEE-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        286 -RVISSGGTDKSVRVWKIQEESQLVF-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       286 -~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                       ..+++.....++.+|.+.....-.- .-.-.+.....++++.+++.|+.|+.+.+|.- .+-.+.++..         .
T Consensus       193 ~di~aV~DW~qTLSFy~LsG~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR-~GvrLGTvg~---------~  262 (1081)
T KOG1538|consen  193 NDILAVADWGQTLSFYQLSGKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR-DGVRLGTVGE---------Q  262 (1081)
T ss_pred             cceEEEEeccceeEEEEecceeecccccCCCCchhheeccCCcEEEEccCCCceEEEee-cCeEEeeccc---------c
Confidence             4777788888888888765332211 11223344556789999999999999999963 4444433321         4


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      ..||+.++..|++++++.|+.||+|-.|++-
T Consensus       263 D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~  293 (1081)
T KOG1538|consen  263 DSWIWTVQAKPNSQYVVVGCQDGTIACYNLI  293 (1081)
T ss_pred             ceeEEEEEEccCCceEEEEEccCeeehhhhH
Confidence            6789999999999999999999999999874

>KOG1524|consensus

Probab=99.85  E-value=7.7e-20  Score=161.35  Aligned_cols=265  Identities=16%  Similarity=0.201  Sum_probs=186.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE--eCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV--ANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |...|.|+.|+.+...+.+++ |..+.+|.-.+.........+........-+....-  -.....++.++.||.+.|.+
T Consensus        13 ~~e~vc~v~w~~~eei~~~~d-Dh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~   91 (737)
T KOG1524|consen   13 NSEKVCCVDWSSNEEIYFVSD-DHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN   91 (737)
T ss_pred             cceeEEeecccccceEEEecc-CceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence            788888999998776666655 555555543332222222211111000000000000  01234688888999999999


Q ss_pred             CCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        219 SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       219 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                      -.+.....+..|.+.+.+-.|+|+|.-|++++.||.|++|.- +|....++.....+|+|++|.|+.+-++-+ ..+.+.
T Consensus        92 k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c-~g~h~~  169 (737)
T KOG1524|consen   92 KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFC-QGGHIS  169 (737)
T ss_pred             ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEe-cCCeEE
Confidence            888888899999999999999999999999999999999984 454444555577899999999998655433 456777


Q ss_pred             EeeccCC-eEEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        299 VWKIQEE-SQLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       299 i~d~~~~-~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      |=.+... +.+....|.+.|-++.|.+ .+.+++|+.|-..+|||.. +.++.+..         .|..+|++++|.|+ 
T Consensus       170 IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~---------~~ey~ITSva~npd-  238 (737)
T KOG1524|consen  170 IKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSA---------AEEYAITSVAFNPE-  238 (737)
T ss_pred             EeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCC---------hhccceeeeeeccc-
Confidence            7777654 4458999999998887765 6788999999999999974 33443322         35667999999999 


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF  433 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i  433 (454)
                      ..++.++.+ +++            +.. +..+.|..++||+||..+++|++....+
T Consensus       239 ~~~~v~S~n-t~R------------~~~-p~~GSifnlsWS~DGTQ~a~gt~~G~v~  281 (737)
T KOG1524|consen  239 KDYLLWSYN-TAR------------FSS-PRVGSIFNLSWSADGTQATCGTSTGQLI  281 (737)
T ss_pred             cceeeeeee-eee------------ecC-CCccceEEEEEcCCCceeeccccCceEE
Confidence            677777754 454            222 3678899999999999999996544433

>KOG1007|consensus

Probab=99.85  E-value=1.4e-19  Score=147.75  Aligned_cols=285  Identities=18%  Similarity=0.244  Sum_probs=197.9

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCC-CEEEEEeCC-------CeEEEEEcCCCceecc---cCCccc-CCCCCCceEEEEE
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDS-KHVYSACKD-------GIIIKWLLETRSKVCS---SPFVKT-DRKSYPPILALAV  198 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~d-------g~i~iwd~~~~~~~~~---~~~~~~-~~~~~~~v~~~~~  198 (454)
                      +....|..  |.+.|..++-+|-. ++|+|+..+       -.+-||.+........   +..... ...+-+.|.|+.|
T Consensus        54 l~skvf~h--~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew  131 (370)
T KOG1007|consen   54 LLSKVFFH--HAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEW  131 (370)
T ss_pred             hhhhhhhc--CCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEE
Confidence            34556666  89999999999965 455555432       2567998865432211   111111 1134458999999


Q ss_pred             eCCCcEEEEecCCCcEEEEeC-CCcc-EEee-----cccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        199 ANNNELVASGDNNSNIKLWSS-SLEH-LHTF-----TGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       199 ~~~~~~l~~~~~dg~v~vw~~-~~~~-~~~~-----~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      .|++..|++-. +..|.+|++ .... +..+     ..|....++-+|+|  +++.+++. .|+++..||+++..+...+
T Consensus       132 ~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~sI  209 (370)
T KOG1007|consen  132 EPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNSI  209 (370)
T ss_pred             cCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcch
Confidence            99999888877 789999999 3333 2222     23667788899998  67777765 5799999999998877666


Q ss_pred             e-ccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecC
Q psy17902        270 F-GHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       270 ~-~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~  343 (454)
                      . .|...|..+.|+|+. .+|++|+.||.|+|||.+..+..  .+.+|..-+-++.+.+  ++++++++.|..|.+|...
T Consensus       210 ~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~  289 (370)
T KOG1007|consen  210 EDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS  289 (370)
T ss_pred             hhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence            4 688999999999986 57899999999999999986654  7788999998888875  6789999999999999875


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      .-.....+........             .++.     .+ .-.++  -+.. ..+.++..  |...|.+++||.-..++
T Consensus       290 svSSE~qi~~~~dese-------------~e~~-----ds-eer~k--pL~d-g~l~tyde--hEDSVY~~aWSsadPWi  345 (370)
T KOG1007|consen  290 SVSSEQQIEFEDDESE-------------SEDE-----DS-EERVK--PLQD-GQLETYDE--HEDSVYALAWSSADPWI  345 (370)
T ss_pred             cccccccccccccccc-------------Ccch-----hh-HHhcc--cccc-cccccccc--cccceEEEeeccCCCee
Confidence            5333222221111000             0000     00 01111  1222 23444554  88999999999999999


Q ss_pred             EEEecCCCceeeeeeeCCCe
Q psy17902        424 VAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +++.+.||++.|=.+.+..+
T Consensus       346 FASLSYDGRviIs~V~r~~k  365 (370)
T KOG1007|consen  346 FASLSYDGRVIISSVPRFLK  365 (370)
T ss_pred             EEEeccCceEEeecCChhhh
Confidence            99999999998877655444

>KOG0303|consensus

Probab=99.85  E-value=5.3e-19  Score=150.44  Aligned_cols=210  Identities=16%  Similarity=0.222  Sum_probs=168.4

Q ss_pred             EeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEeecCC-CEEEEeeCCC
Q psy17902        225 HTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDILAKN-RVISSGGTDK  295 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg  295 (454)
                      -.+.+|+++|..++|+| +...|++||.|.+|.||++..+       +.+..+.+|...|..+.|+|.- +.|++++.|.
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn  154 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN  154 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence            34578999999999999 5678999999999999998654       3466788999999999999975 8899999999


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      +|.+|++.++..+....|...|..+.|. ++.+|++.+.|..|+|||.+++..+..-..+.+..        -..+.|-.
T Consensus       155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k--------~~Raifl~  226 (472)
T KOG0303|consen  155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAK--------PARAIFLA  226 (472)
T ss_pred             eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCC--------cceeEEec
Confidence            9999999999988666699888877776 68899999999999999999999998875544433        45566778


Q ss_pred             CCCEEEEec---CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        375 NSDLVASGS---YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       375 ~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|.++.||-   ++..+-+||..+-..--.+........|.---|.||...|+.++-.|+.|+-+.+....
T Consensus       227 ~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~  297 (472)
T KOG0303|consen  227 SGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP  297 (472)
T ss_pred             cCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence            888555553   46789999977653333344334555666667899999998886789999998876554

>KOG1963|consensus

Probab=99.85  E-value=1.9e-18  Score=161.51  Aligned_cols=291  Identities=18%  Similarity=0.238  Sum_probs=202.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |.-.++|.++||+++++|+|..||.|.+|.--. .....+.   ...+-|...|.+++|+++|.+|++|+..|.+.+|.+
T Consensus       204 Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~---t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~  280 (792)
T KOG1963|consen  204 HTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETC---TLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQL  280 (792)
T ss_pred             hcccceeEEeccccceEEEeccCCcEEEEeccccccccccc---eEEEecccccceeEEecCCceEeecccceEEEEEee
Confidence            777899999999999999999999999996432 1111111   111247789999999999999999999999999999


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-----------cCCceeEEEeecCCCEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-----------HQSAITSLDILAKNRVI  288 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l  288 (454)
                      .....+-+..-.++|..+.++||+.+.+....|+.|.+....+.....++.+           ..+-.+.++++|.-+.+
T Consensus       281 ~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~  360 (792)
T KOG1963|consen  281 ETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSL  360 (792)
T ss_pred             cCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCce
Confidence            5555666677889999999999999999999999999998866554443332           23446788899977777


Q ss_pred             EEeeCCCcEEEeeccCCeEE-E-----EccccCC------eEEE-EecCCCEEEEEe--------CCC--CEEEEecCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-V-----FNGHSRG------IDMT-RRVNDQQFITCG--------EDG--TLSLWSILKK  345 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-~-----~~~~~~~------i~~~-~~~~~~~l~~~~--------~dg--~i~iwd~~~~  345 (454)
                      +-.+..|.|.+||+.+...+ .     ...+.+.      ++.+ ....+.+++|.-        .||  .+++|-....
T Consensus       361 vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~  440 (792)
T KOG1963|consen  361 VLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPN  440 (792)
T ss_pred             eecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCC
Confidence            77889999999999887655 1     1111111      2222 223455666543        232  4677876554


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEe-cCCC-EEEEecCCCcEEEEEcCCCcee--------eEeccCCCceeeeEEE
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACL-HNSD-LVASGSYDGCVKLWKITPKRTL--------EFLQDIPLSGVINSLV  415 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~-~l~~~~~dg~v~iwd~~~~~~~--------~~~~~~~~~~~v~~l~  415 (454)
                      .....+.....    .+|...+...++. +... ..++++.||.++||-+...+.+        ...-+..|..++++++
T Consensus       441 ~kt~~L~T~I~----~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~  516 (792)
T KOG1963|consen  441 SKTFILNTKIN----NPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALC  516 (792)
T ss_pred             cceeEEEEEEe----cCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchh
Confidence            43333221110    1233334444443 3333 8999999999999998432111        1111223788999999


Q ss_pred             EcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        416 FTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       416 ~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |+.||..|+++  .++.|.+|+..+
T Consensus       517 fs~dGslla~s--~~~~Itiwd~~~  539 (792)
T KOG1963|consen  517 FSQDGSLLAVS--FDDTITIWDYDT  539 (792)
T ss_pred             hcCCCcEEEEe--cCCEEEEecCCC
Confidence            99999887776  799999999876

>KOG1587|consensus

Probab=99.84  E-value=7e-19  Score=163.99  Aligned_cols=246  Identities=17%  Similarity=0.250  Sum_probs=180.9

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc--EEEEecCCCcEEEE
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE--LVASGDNNSNIKLW  217 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~v~vw  217 (454)
                      -...|+|+.|+| +.++||.|+.+|.|.+||+..+..............|..+++.+.|..+..  -+++++.||.|..|
T Consensus       241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W  320 (555)
T KOG1587|consen  241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW  320 (555)
T ss_pred             cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence            356799999999 567888999999999999998766433333334457889999999976544  49999999999999


Q ss_pred             eCCCcc--E-----Eeec------ccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCc---e-----eEEEeeccCCc
Q psy17902        218 SSSLEH--L-----HTFT------GHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDR---A-----YVETLFGHQSA  275 (454)
Q Consensus       218 ~~~~~~--~-----~~~~------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~-----~~~~~~~~~~~  275 (454)
                      ++..-.  .     ....      .....++++.|.+ +...+++|+..|.|..-+....   .     ....+..|.++
T Consensus       321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~  400 (555)
T KOG1587|consen  321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP  400 (555)
T ss_pred             eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence            872211  1     1111      2234688999987 4568999999999887443222   1     12345578999


Q ss_pred             eeEEEeecCCCEEEEeeCCCcEEEeecc-CCeEE-EEccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCc--cce
Q psy17902        276 ITSLDILAKNRVISSGGTDKSVRVWKIQ-EESQL-VFNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKV--PTH  349 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~~-~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~--~~~  349 (454)
                      |+++.++|-+..++..+.|.+|+||... ...++ .+..+...+..+.|++.  ..|+++..+|.|.+||+....  ++.
T Consensus       401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~  480 (555)
T KOG1587|consen  401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVL  480 (555)
T ss_pred             eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCcc
Confidence            9999999988555444559999999987 44444 55556666888888764  478888999999999996643  444


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      +....         ....+.+.|+++|++|++|...|++.+|++..
T Consensus       481 s~~~~---------~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~  517 (555)
T KOG1587|consen  481 SQKVC---------SPALTRVRWSPNGKLLAVGDANGTTHILKLSE  517 (555)
T ss_pred             ccccc---------ccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence            44332         23378889999999999999999999999964

>KOG1445|consensus

Probab=99.84  E-value=1.4e-19  Score=162.84  Aligned_cols=262  Identities=19%  Similarity=0.257  Sum_probs=184.5

Q ss_pred             EcCCCCEEEE--EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeCC------
Q psy17902        150 VTSDSKHVYS--ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSSS------  220 (454)
Q Consensus       150 ~s~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~------  220 (454)
                      |+.+..++|+  ++..|.|-||++.....+..-.+...  -....|+.+.|.| |...||+++.||.|++|.+.      
T Consensus       587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l--~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e  664 (1012)
T KOG1445|consen  587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGL--FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE  664 (1012)
T ss_pred             eeeccceEEEEecCCCceEEEEEcCCCCCCCccccccc--ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc
Confidence            3444455554  45569999999986544332221111  2345799999999 67889999999999999982      


Q ss_pred             --CccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        221 --LEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       221 --~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                        ..+-..+..|...|+++.|+| -.+.|++++.|.+|++||+.+++....+.+|.+.|.+++|+|+|+.+++.+.||+|
T Consensus       665 ~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~  744 (1012)
T KOG1445|consen  665 NEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTL  744 (1012)
T ss_pred             ccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceE
Confidence              234566788999999999999 45789999999999999999999989999999999999999999999999999999


Q ss_pred             EEeeccCCeEEEEcccc----CCeEEEEecCCCEEEEEeCC----CCEEEEecCCC--ccceeeecccCCCCCCCCCCcE
Q psy17902        298 RVWKIQEESQLVFNGHS----RGIDMTRRVNDQQFITCGED----GTLSLWSILKK--VPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       298 ~i~d~~~~~~~~~~~~~----~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      ++|..+++....+.+..    .....++..++.++++.+.|    ..|.+||..+-  .++.+........        +
T Consensus       745 rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps--------~  816 (1012)
T KOG1445|consen  745 RVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPS--------P  816 (1012)
T ss_pred             EEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCc--------c
Confidence            99999987776544432    34466777788888877644    46888887553  3343332211110        1


Q ss_pred             EEEEEecCCC-EEEEecCCCcEEEEEcCCCcee-eEeccCCCceeeeEEEEcCCCC
Q psy17902        368 TSVACLHNSD-LVASGSYDGCVKLWKITPKRTL-EFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       368 ~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      .--.+.+|.+ +|++|-.|..|.+|.+....+. ..+..+.....-..++|.+...
T Consensus       817 LvP~YD~Ds~~lfltGKGD~~v~~yEv~~esPy~lpl~~f~sp~~hqGl~fl~K~~  872 (1012)
T KOG1445|consen  817 LVPHYDYDSNVLFLTGKGDRFVNMYEVIYESPYLLPLAPFMSPVGHQGLAFLQKLK  872 (1012)
T ss_pred             ccccccCCCceEEEecCCCceEEEEEecCCCceeeecccccCCCcccceeeecccc
Confidence            1122344544 7788889999999998765332 2222211122233466665543

>KOG1334|consensus

Probab=99.84  E-value=4.8e-20  Score=160.84  Aligned_cols=297  Identities=14%  Similarity=0.225  Sum_probs=222.8

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC--CcEEEEecC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN--NELVASGDN  210 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~  210 (454)
                      ...|.+  |.+.|..+.|+..|..|++|+.|..|.+||.........+..     +|...|....|-|.  ..-+++++.
T Consensus       135 ~~kL~~--H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~S-----GH~~NvfQaKFiP~s~d~ti~~~s~  207 (559)
T KOG1334|consen  135 QKKLNK--HKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFES-----GHCNNVFQAKFIPFSGDRTIVTSSR  207 (559)
T ss_pred             hhcccC--CCCccceeeecccCceeeccCccceEEeehhhccCccccccc-----ccccchhhhhccCCCCCcCceeccc
Confidence            445666  999999999999999999999999999999998877766654     78888888888774  457899999


Q ss_pred             CCcEEEEeC--CCcc--EEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEe---eccCC---ceeEE
Q psy17902        211 NSNIKLWSS--SLEH--LHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETL---FGHQS---AITSL  279 (454)
Q Consensus       211 dg~v~vw~~--~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~---~v~~~  279 (454)
                      ||.|++=.+  ++..  ...+..|.++|.-++.-|+. .-|++++.|+.+.-+|++.......+   ..+..   ....|
T Consensus       208 dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~I  287 (559)
T KOG1334|consen  208 DGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTI  287 (559)
T ss_pred             cCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeE
Confidence            999999887  3322  34567899999999999865 57889999999999999877543333   23333   56788


Q ss_pred             EeecCC-CEEEEeeCCCcEEEeeccCCeEE-------EE------ccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCC
Q psy17902        280 DILAKN-RVISSGGTDKSVRVWKIQEESQL-------VF------NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       280 ~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-------~~------~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      +.+|.. +.+++++.|..+++||.+.-..-       .+      ......|+++.+. .+.-+++...|-.|+++.-..
T Consensus       288 a~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~  367 (559)
T KOG1334|consen  288 AVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSM  367 (559)
T ss_pred             ecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEecccc
Confidence            888877 48999999999999998753221       11      1233457788877 677788888899999995433


Q ss_pred             Ccc---ceee---ecccC-CCCCCCCCCcEEEEEE-ecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        345 KVP---THTI---PVAHG-YDSSSSEPNWITSVAC-LHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       345 ~~~---~~~~---~~~~~-~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      +.-   ...-   +.... +.++. ....|..+-| -|...|+++|+.-|.|.||+-.+++.+..+.+-  ...|+||.=
T Consensus       368 ~~G~~p~~~s~~~~~~k~vYKGHr-N~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegD--r~VVNCLEp  444 (559)
T KOG1334|consen  368 GDGSEPDPSSPREQYVKRVYKGHR-NSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGD--RHVVNCLEP  444 (559)
T ss_pred             ccCCCCCCCcchhhccchhhcccc-cccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcc--cceEeccCC
Confidence            221   0000   00000 11111 1223666665 477889999999999999999999999988874  348999999


Q ss_pred             cCCCCEEEEEecCCCceeeeeeeC
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +|--..||++ |-|.-|+||-...
T Consensus       445 HP~~PvLAsS-Gid~DVKIWTP~~  467 (559)
T KOG1334|consen  445 HPHLPVLASS-GIDHDVKIWTPLT  467 (559)
T ss_pred             CCCCchhhcc-CCccceeeecCCc
Confidence            9999999888 9999999998643

>KOG0771|consensus

Probab=99.84  E-value=2e-18  Score=148.57  Aligned_cols=199  Identities=18%  Similarity=0.309  Sum_probs=150.4

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcc--
Q psy17902        235 TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNG--  312 (454)
Q Consensus       235 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--  312 (454)
                      .+++|+++|..|++|+.||+++||+..+...+.....|...|.++.|+||+++|++.+.| ..+||+..++..+....  
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            678999999999999999999999988888777788899999999999999999999999 89999999986652222  


Q ss_pred             -ccCCeEEEEecCCC-----EEEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        313 -HSRGIDMTRRVNDQ-----QFITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       313 -~~~~i~~~~~~~~~-----~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                       .......+.|..++     ++++.- .-+.|+.|++....--..++.....    .....|++++.+++|+++|.|+.|
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~----~~~~siSsl~VS~dGkf~AlGT~d  302 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKI----KRFKSISSLAVSDDGKFLALGTMD  302 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhh----hccCcceeEEEcCCCcEEEEeccC
Confidence             12223334444333     233222 4566777776443221111111000    112239999999999999999999


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |.|-|++..+.+.+..++. .|.+.|+.+.|+||.++++.. +.+....+.....
T Consensus       303 GsVai~~~~~lq~~~~vk~-aH~~~VT~ltF~Pdsr~~~sv-Ss~~~~~v~~l~v  355 (398)
T KOG0771|consen  303 GSVAIYDAKSLQRLQYVKE-AHLGFVTGLTFSPDSRYLASV-SSDNEAAVTKLAV  355 (398)
T ss_pred             CcEEEEEeceeeeeEeehh-hheeeeeeEEEcCCcCccccc-ccCCceeEEEEee
Confidence            9999999998888877765 488999999999999999986 7788887777654

>KOG1009|consensus

Probab=99.83  E-value=4.3e-19  Score=151.55  Aligned_cols=257  Identities=14%  Similarity=0.165  Sum_probs=182.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce----------ecccCCcccCCCCCCceEEEEEeCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK----------VCSSPFVKTDRKSYPPILALAVANN  201 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~~~  201 (454)
                      ....|..  |...|+++.|+|+|.+||+|+.+|.|.+|....-..          ...........+|...|+.++|+|+
T Consensus        57 y~s~Ls~--H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d  134 (434)
T KOG1009|consen   57 YLSSLSR--HTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPD  134 (434)
T ss_pred             EeecccC--CcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCC
Confidence            5677888  999999999999999999999999999997652100          0001112223468889999999999


Q ss_pred             CcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--------c-
Q psy17902        202 NELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--------G-  271 (454)
Q Consensus       202 ~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------~-  271 (454)
                      +.++++++.|..+++||+ .+..+..+..|...+..++|.|-++++++-+.|...+.+.+.....+....        . 
T Consensus       135 ~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~  214 (434)
T KOG1009|consen  135 SNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFN  214 (434)
T ss_pred             CceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccC
Confidence            999999999999999999 888888999999999999999999999999999877777765433222111        0 


Q ss_pred             ----------cC----CceeEEEeecCCCEEEEeeC----CC-----cEEEeeccCCeEE--EEccccCCeEE-------
Q psy17902        272 ----------HQ----SAITSLDILAKNRVISSGGT----DK-----SVRVWKIQEESQL--VFNGHSRGIDM-------  319 (454)
Q Consensus       272 ----------~~----~~v~~~~~~~~~~~l~~~~~----dg-----~i~i~d~~~~~~~--~~~~~~~~i~~-------  319 (454)
                                |.    .-...++|+|+|.+|++...    .+     ..++|+-..-+..  .+.....+...       
T Consensus       215 ~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy  294 (434)
T KOG1009|consen  215 EREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVY  294 (434)
T ss_pred             CCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeE
Confidence                      11    22356789999998887532    22     2344443211111  11111111111       


Q ss_pred             -----------EEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        320 -----------TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       320 -----------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                                 +...+-..+++......|.+||..+..++......|        -..|+.++|+++|.+|+..|.||..
T Consensus       295 ~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~P~~~v~nih--------y~~iTDiaws~dg~~l~vSS~DGyC  366 (434)
T KOG1009|consen  295 YELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLEPLAVVDNIH--------YSAITDIAWSDDGSVLLVSSTDGFC  366 (434)
T ss_pred             EEeccccccccccccccceEEEEeecceEEEeccccccceEEEeeee--------eeeecceeecCCCcEEEEeccCCce
Confidence                       111123334444456679999999988888776544        3449999999999999999999998


Q ss_pred             EEEEcCCCce
Q psy17902        389 KLWKITPKRT  398 (454)
Q Consensus       389 ~iwd~~~~~~  398 (454)
                      .+.-+...++
T Consensus       367 S~vtfe~~el  376 (434)
T KOG1009|consen  367 SLVTFEPWEL  376 (434)
T ss_pred             EEEEEcchhc
Confidence            8888776543

>KOG1240|consensus

Probab=99.83  E-value=2.2e-18  Score=166.05  Aligned_cols=307  Identities=13%  Similarity=0.151  Sum_probs=205.0

Q ss_pred             CceeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCCCcEEE
Q psy17902        129 ATVVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANNNELVA  206 (454)
Q Consensus       129 ~~~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  206 (454)
                      .-..+.+|..  |+..|..++.++. +.++++|+.||+|++|++...... .......+.......+.++...+.+..+|
T Consensus      1037 ~G~lVAhL~E--hs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~A 1114 (1431)
T KOG1240|consen 1037 RGILVAHLHE--HSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFA 1114 (1431)
T ss_pred             cceEeehhhh--ccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEE
Confidence            3447788888  9999999998875 499999999999999998753322 11111111122456899999999999999


Q ss_pred             EecCCCcEEEEeCCCcc--------EEeeccc-CCCe-EEEEEcC-CC-CEEEEEeCCCcEEEEeCCCceeEEEee--cc
Q psy17902        207 SGDNNSNIKLWSSSLEH--------LHTFTGH-KAPI-TGLAISF-EC-DTLYSSSNDRSIKVWNIEDRAYVETLF--GH  272 (454)
Q Consensus       207 ~~~~dg~v~vw~~~~~~--------~~~~~~~-~~~v-~~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~  272 (454)
                      +++.||.|++.+++...        ......+ .+.+ ..-+|.. .. ..|+.+...+.|..||+++......++  ..
T Consensus      1115 v~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~ 1194 (1431)
T KOG1240|consen 1115 VSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLR 1194 (1431)
T ss_pred             EEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcc
Confidence            99999999999983311        1111222 2223 3333332 23 378888889999999998876655443  34


Q ss_pred             CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc--cCCeEEEEec---C-CCEEEE-Ee-CCCCEEEEecCC
Q psy17902        273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH--SRGIDMTRRV---N-DQQFIT-CG-EDGTLSLWSILK  344 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~i~~~~~~---~-~~~l~~-~~-~dg~i~iwd~~~  344 (454)
                      .+.|++++.+|.++++++|+..|.+.+||++-+..+....|  ..++..++..   + ....++ ++ ..+.|.+|++.+
T Consensus      1195 hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~ 1274 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMET 1274 (1431)
T ss_pred             ccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeeccc
Confidence            57899999999999999999999999999998877732222  2344333322   2 234444 44 578999999999


Q ss_pred             CccceeeecccCCCCC----------CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee--e------------
Q psy17902        345 KVPTHTIPVAHGYDSS----------SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL--E------------  400 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~----------~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~--~------------  400 (454)
                      +.+...+....+....          ..+.-......+...+.++.+|+.|..|+.||.......  .            
T Consensus      1275 g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~ 1354 (1431)
T KOG1240|consen 1275 GLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNS 1354 (1431)
T ss_pred             CcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccc
Confidence            8777666544111100          011112223333334558999999999999997643111  0            


Q ss_pred             ----------------------------------Ee------ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        401 ----------------------------------FL------QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       401 ----------------------------------~~------~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                                                        .+      ....|..+|++|++......|+++++.||.|.+|.
T Consensus      1355 ~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1355 ESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             hhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence                                              00      00035677999988777666666669999999995

>KOG0290|consensus

Probab=99.82  E-value=7.8e-18  Score=137.83  Aligned_cols=269  Identities=15%  Similarity=0.238  Sum_probs=189.6

Q ss_pred             CCeEEEEEcC--C-CCEEEEEeC----CCeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCC-----cEEEEe
Q psy17902        143 ASITCIAVTS--D-SKHVYSACK----DGIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNN-----ELVASG  208 (454)
Q Consensus       143 ~~V~~~~~s~--~-~~~l~~~~~----dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~  208 (454)
                      -+++++.|+.  + +.+||.|+.    .+.|.|..+.  +++......+     .|.-+++.+.|.|+.     .+||++
T Consensus        45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~f-----d~~YP~tK~~wiPd~~g~~pdlLATs  119 (364)
T KOG0290|consen   45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANF-----DHPYPVTKLMWIPDSKGVYPDLLATS  119 (364)
T ss_pred             CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCC-----CCCCCccceEecCCccccCcchhhcc
Confidence            4588999983  2 457888874    3667666554  3443333332     577899999999975     356665


Q ss_pred             cCCCcEEEEeCCC--ccEE--------eecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCce---eEEEeeccCC
Q psy17902        209 DNNSNIKLWSSSL--EHLH--------TFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRA---YVETLFGHQS  274 (454)
Q Consensus       209 ~~dg~v~vw~~~~--~~~~--------~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~  274 (454)
                      +  -.+++|.+..  ..+.        +-..+..+++++.|+. +.++|.+++-|-+..|||++++.   ....+..|..
T Consensus       120 ~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDK  197 (364)
T KOG0290|consen  120 S--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDK  197 (364)
T ss_pred             c--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCc
Confidence            5  5799999832  1111        1234678999999986 56789999999999999999863   3456678999


Q ss_pred             ceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE--EEcccc--CCeEEEEec--CCCEEEEEe-CCCCEEEEecCCC-
Q psy17902        275 AITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL--VFNGHS--RGIDMTRRV--NDQQFITCG-EDGTLSLWSILKK-  345 (454)
Q Consensus       275 ~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~--~~i~~~~~~--~~~~l~~~~-~dg~i~iwd~~~~-  345 (454)
                      .|..|+|...+ +.|++.+.||.||+||++.....  .+....  .+..-+.+.  +.+++++-. ....|.|.|++.. 
T Consensus       198 EV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~  277 (364)
T KOG0290|consen  198 EVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPC  277 (364)
T ss_pred             ceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCC
Confidence            99999999765 78999999999999999986554  333332  233333343  235666555 4457999999764 


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCce---eeEeccCCCceeeeEEEEcC-CC
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRT---LEFLQDIPLSGVINSLVFTS-DH  420 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~-d~  420 (454)
                      .++.++..         |...|+.++|.|... .|++++.|..+.+||+...-.   ...+......+.|+.+.|+| .+
T Consensus       278 tpva~L~~---------H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~  348 (364)
T KOG0290|consen  278 TPVARLRN---------HQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQP  348 (364)
T ss_pred             cceehhhc---------CcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCC
Confidence            34444443         566699999999654 899999999999999976421   22222233677899999995 46


Q ss_pred             CEEEEEe
Q psy17902        421 KHLVAGI  427 (454)
Q Consensus       421 ~~l~~~~  427 (454)
                      .+|+++.
T Consensus       349 Dwiai~~  355 (364)
T KOG0290|consen  349 DWIAICF  355 (364)
T ss_pred             CEEEEEe
Confidence            6787774

>KOG1188|consensus

Probab=99.82  E-value=6e-19  Score=147.46  Aligned_cols=252  Identities=16%  Similarity=0.316  Sum_probs=177.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTS--DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      .+..|++  |...++.+.|..  ....+.+|+.||+|++||+........+....   ....+..+++.+.+++.+++|+
T Consensus        62 ~l~~fk~--~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~---~~~~~f~~ld~nck~~ii~~Gt  136 (376)
T KOG1188|consen   62 LLEEFKG--PPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQ---QSGTPFICLDLNCKKNIIACGT  136 (376)
T ss_pred             hhheecC--CCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccC---CCCCcceEeeccCcCCeEEecc
Confidence            4556777  999999999976  46789999999999999999877665554422   1234677888887888898886


Q ss_pred             C----CCcEEEEeC-CCcc-EEe-ecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCce---eEEEeeccCCceeE
Q psy17902        210 N----NSNIKLWSS-SLEH-LHT-FTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRA---YVETLFGHQSAITS  278 (454)
Q Consensus       210 ~----dg~v~vw~~-~~~~-~~~-~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~  278 (454)
                      .    +-.|.+||+ ..+. +.. ...|...|++++|+|. .++|++||.||.|.+||+....   .+.....|...|.+
T Consensus       137 E~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~  216 (376)
T KOG1188|consen  137 ELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHL  216 (376)
T ss_pred             ccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeee
Confidence            4    568999999 3332 443 4679999999999995 5799999999999999997542   22233468888999


Q ss_pred             EEeecCC-CEEEEeeCCCcEEEeeccCCeEEEEcccc--------------CCeEEEEecCCCEEEEEeC-CCCEEEEec
Q psy17902        279 LDILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGHS--------------RGIDMTRRVNDQQFITCGE-DGTLSLWSI  342 (454)
Q Consensus       279 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~~~l~~~~~-dg~i~iwd~  342 (454)
                      +.|..++ +.|.+-+...+..+|++..+........+              ..|.+........+++++. -+...++-+
T Consensus       217 igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~  296 (376)
T KOG1188|consen  217 IGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPL  296 (376)
T ss_pred             eeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEe
Confidence            9999777 56888889999999999877654211111              1112222223445555444 566666554


Q ss_pred             CC---CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        343 LK---KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       343 ~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ..   +.........++     +|...|.++.|...+.++.+|+.||.+.+|..
T Consensus       297 ~~~~s~~~~~~~a~l~g-----~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~  345 (376)
T KOG1188|consen  297 VDTSSGSLLTEPAILQG-----GHEEIVRDILFDVKNDVLYTGGEDGLLQAWKV  345 (376)
T ss_pred             eecccccccCccccccC-----CcHHHHHHHhhhcccceeeccCCCceEEEEec
Confidence            32   222222211111     24556888999988999999999999999986

>KOG0644|consensus

Probab=99.82  E-value=3.1e-20  Score=171.91  Aligned_cols=251  Identities=20%  Similarity=0.302  Sum_probs=197.3

Q ss_pred             ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy17902        177 VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI  255 (454)
Q Consensus       177 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  255 (454)
                      +..+.......+|.+.|+|+.|...|.++++|+.|..|+||.+ +..++....+|.+.|+.++.+.+..++++++.|..|
T Consensus       177 vqkmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vI  256 (1113)
T KOG0644|consen  177 VQKMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVI  256 (1113)
T ss_pred             HHHHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceE
Confidence            3333444445689999999999999999999999999999999 788899999999999999999999999999999999


Q ss_pred             EEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE------EEccccCCeEEEEecCCCEEE
Q psy17902        256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL------VFNGHSRGIDMTRRVNDQQFI  329 (454)
Q Consensus       256 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~------~~~~~~~~i~~~~~~~~~~l~  329 (454)
                      ++|-+.++.++..+.+|++.|++|+|+|-.    +.+.||++++||.+-....      .+.+.........-.++..++
T Consensus       257 rvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~  332 (1113)
T KOG0644|consen  257 RVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFL  332 (1113)
T ss_pred             EEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccc
Confidence            999999999999999999999999999965    6789999999999822111      222222222333344677899


Q ss_pred             EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCc
Q psy17902        330 TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLS  408 (454)
Q Consensus       330 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~  408 (454)
                      +++.|+.-..|.+.....-...               +.-+.++.+. .+.+++-.+-.+.+|++.+|..+..+.+  |.
T Consensus       333 Tgs~d~ea~n~e~~~l~~~~~~---------------lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~g--hs  395 (1113)
T KOG0644|consen  333 TGSRDGEARNHEFEQLAWRSNL---------------LIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMG--HS  395 (1113)
T ss_pred             cccCCcccccchhhHhhhhccc---------------eEEEeccccccccceeeeeeeEeeeeecccchhhhhhcc--cc
Confidence            9999998888876332111100               1112222222 3666777788899999999988888877  88


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEE
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAI  448 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~  448 (454)
                      ..+..|.++|-+..++-..|.||...+|+.-.+..-..+.
T Consensus       396 d~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~  435 (1113)
T KOG0644|consen  396 DEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF  435 (1113)
T ss_pred             cceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee
Confidence            8899999999999998888999999999998887665554

>KOG1963|consensus

Probab=99.80  E-value=1.7e-17  Score=155.20  Aligned_cols=308  Identities=20%  Similarity=0.322  Sum_probs=213.8

Q ss_pred             hcCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce
Q psy17902        114 QEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI  193 (454)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v  193 (454)
                      .+|++..|..-........++.|..  |...|++++|+++|.+|++|+..|.+.+|.+.+++... ++      .-.++|
T Consensus       225 ~dGrI~vw~d~~~~~~~~t~t~lHW--H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqf-LP------RLgs~I  295 (792)
T KOG1963|consen  225 SDGRILVWRDFGSSDDSETCTLLHW--HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQF-LP------RLGSPI  295 (792)
T ss_pred             cCCcEEEEeccccccccccceEEEe--cccccceeEEecCCceEeecccceEEEEEeecCCCccc-cc------ccCCee
Confidence            3577777766555677778999999  99999999999999999999999999999999987332 22      356699


Q ss_pred             EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecc-----------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        194 LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTG-----------HKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      ..+.++||+.+.+....|..|.+... +.....++.+           ..+-.+.++++|..+.++-.+..|.|.+||+-
T Consensus       296 ~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~  375 (792)
T KOG1963|consen  296 LHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLY  375 (792)
T ss_pred             EEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecc
Confidence            99999999999999999999999987 3333222221           23456788999977788888899999999998


Q ss_pred             CceeEEEee-----------ccCCceeEEEeecCCCEEEEee--------CC--CcEEEeeccCCeEE------EEcccc
Q psy17902        262 DRAYVETLF-----------GHQSAITSLDILAKNRVISSGG--------TD--KSVRVWKIQEESQL------VFNGHS  314 (454)
Q Consensus       262 ~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~~~--------~d--g~i~i~d~~~~~~~------~~~~~~  314 (454)
                      +...+..+.           .+.-.++.++.+..|++++|+-        .|  -.+++|-.......      ....|.
T Consensus       376 td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~  455 (792)
T KOG1963|consen  376 TDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHG  455 (792)
T ss_pred             ccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCC
Confidence            876665442           1233467777777788888863        23  35788876543322      344555


Q ss_pred             CCeEEEEe--cC-CCEEEEEeCCCCEEEEecCCCccc------eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        315 RGIDMTRR--VN-DQQFITCGEDGTLSLWSILKKVPT------HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       315 ~~i~~~~~--~~-~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .......+  +. ...+++++.||.++||-+.....+      ......+.     .|..++++++|+.||.+|+++ .+
T Consensus       456 ~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~s-----y~k~~i~a~~fs~dGslla~s-~~  529 (792)
T KOG1963|consen  456 NAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGS-----YHKTPITALCFSQDGSLLAVS-FD  529 (792)
T ss_pred             ceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeec-----cccCcccchhhcCCCcEEEEe-cC
Confidence            54433333  22 338999999999999998443322      22221111     256669999999999766655 56


Q ss_pred             CcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcC----CCCEEEEEecCCCceeeeeeeCC
Q psy17902        386 GCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTS----DHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       386 g~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~----d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++|.+||..+. ........  ...++..++|..    ++....   .....+.+|++...
T Consensus       530 ~~Itiwd~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~WNll~~  585 (792)
T KOG1963|consen  530 DTITIWDYDTKNELLCTEGS--RNWPIAELLFTAQTQNDGALVH---ATQQRLSVWNLLSM  585 (792)
T ss_pred             CEEEEecCCChhhhhccccc--cccchHhHhhhcccccccceee---ccCceEehHhhhhh
Confidence            79999999883 33333332  334444454443    332222   35788889987543

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.80  E-value=1.5e-16  Score=145.15  Aligned_cols=265  Identities=8%  Similarity=0.124  Sum_probs=166.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~  218 (454)
                      +.+....++++|++++|++++ .++.|.+|++.....+......    ........++|+|++++|++++. ++.|.+|+
T Consensus        33 ~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~----~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~  108 (330)
T PRK11028         33 VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES----PLPGSPTHISTDHQGRFLFSASYNANCVSVSP  108 (330)
T ss_pred             cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee----cCCCCceEEEECCCCCEEEEEEcCCCeEEEEE
Confidence            345577899999999988765 4789999998732111111100    12224678999999998888764 78999999


Q ss_pred             CC--C---ccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEE-----ee-ccCCceeEEEeecCCC
Q psy17902        219 SS--L---EHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVET-----LF-GHQSAITSLDILAKNR  286 (454)
Q Consensus       219 ~~--~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~-----~~-~~~~~v~~~~~~~~~~  286 (454)
                      +.  +   ..+..+. +.....+++++|+++++++++ .++.|.+||+.+...+..     .. ........+.|+|+++
T Consensus       109 ~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~  187 (330)
T PRK11028        109 LDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQ  187 (330)
T ss_pred             ECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCC
Confidence            83  2   1222222 334567789999999887655 468999999976332211     11 1233467899999999


Q ss_pred             EEEEeeC-CCcEEEeeccC--CeE--E-EEcccc-------CCeEEEEecCCCEEEEEe-CCCCEEEEecCCCccceeee
Q psy17902        287 VISSGGT-DKSVRVWKIQE--ESQ--L-VFNGHS-------RGIDMTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       287 ~l~~~~~-dg~i~i~d~~~--~~~--~-~~~~~~-------~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~  352 (454)
                      +++++.. ++.|.+|++..  +..  . .+....       ....+...+++.+++++. .++.|.+|++........+.
T Consensus       188 ~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~  267 (330)
T PRK11028        188 YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFE  267 (330)
T ss_pred             EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEe
Confidence            9988776 89999999973  222  1 111111       111234456677777775 57899999996543221111


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEcCCC-ceeeEeccCCCceeeeEEEE
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKITPK-RTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~  416 (454)
                      .....      ......+.++|+|++|+++.. +++|.+|++... ..+..+..........+++|
T Consensus       268 ~~~~~------~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~  327 (330)
T PRK11028        268 GHQPT------ETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAVGQGPMWVSV  327 (330)
T ss_pred             EEEec------cccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence            11100      012457899999998888775 889999988532 22333333223344555555

>KOG4497|consensus

Probab=99.80  E-value=2.6e-17  Score=137.15  Aligned_cols=280  Identities=13%  Similarity=0.111  Sum_probs=191.4

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeC-CCccE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSS-SLEHL  224 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~-~~~~~  224 (454)
                      -++|||+|+++|+.+.- .+.|-|..+.+..+.+..       -..|..+.|..+..+++++ ..++.|.+|++ ..+-.
T Consensus        13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-------ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~   84 (447)
T KOG4497|consen   13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-------LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWY   84 (447)
T ss_pred             ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-------HHHhhheeeeccceeeeeeeeccceEEEEEeecceeE
Confidence            46899999999998865 888889888776655442       3467888999888766554 56889999999 66666


Q ss_pred             EeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC---------
Q psy17902        225 HTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD---------  294 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------  294 (454)
                      ..+......+.+++|+|+|+. |.+...+-.|.+|.+.+.+.... .-....+..++|+|+|++.+.++.-         
T Consensus        85 ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~  163 (447)
T KOG4497|consen   85 CKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS  163 (447)
T ss_pred             EEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHH
Confidence            777888899999999999955 55666789999999998765433 2234456788889988877665431         


Q ss_pred             ---------------------------CcEEEeeccCCeEEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCc
Q psy17902        295 ---------------------------KSVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       295 ---------------------------g~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                                                 ..+.+||.--.-.+......-++..+.+++ ++++++|+.|+.++|.+--+.+
T Consensus       164 ~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk  243 (447)
T KOG4497|consen  164 SCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWK  243 (447)
T ss_pred             hhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeee
Confidence                                       123344432221211222234555555555 7888999999999986643332


Q ss_pred             cceeeec------------------------------------------------------ccCCC---CCCCCCCcEEE
Q psy17902        347 PTHTIPV------------------------------------------------------AHGYD---SSSSEPNWITS  369 (454)
Q Consensus       347 ~~~~~~~------------------------------------------------------~~~~~---~~~~~~~~i~~  369 (454)
                      +...+-.                                                      .+...   ........+..
T Consensus       244 ~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~  323 (447)
T KOG4497|consen  244 PFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGK  323 (447)
T ss_pred             ehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccce
Confidence            2211110                                                      00000   00112334778


Q ss_pred             EEEecCCCEEEEecC--CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        370 VACLHNSDLVASGSY--DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++|++|..+++|-..  -+.+-+||+...+....+.   ...+|....|.|....|++++ ...++++|-..
T Consensus       324 lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi---Qk~piraf~WdP~~prL~vct-g~srLY~W~ps  391 (447)
T KOG4497|consen  324 LAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI---QKHPIRAFEWDPGRPRLVVCT-GKSRLYFWAPS  391 (447)
T ss_pred             eeecCCceEEeeecCCCCceEEEEechhhhhhhhhh---hccceeEEEeCCCCceEEEEc-CCceEEEEcCC
Confidence            999999999988754  3579999998766655554   567899999999999998884 45668888653

>KOG1272|consensus

Probab=99.80  E-value=2.1e-19  Score=155.93  Aligned_cols=262  Identities=15%  Similarity=0.197  Sum_probs=214.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH  223 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~  223 (454)
                      .-+.+.|+.+|++|+.|+..|.|-.+|..+......+.       -...|.++.|-.+.+++|++- ...++|||-.+..
T Consensus       131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~-------v~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~GtE  202 (545)
T KOG1272|consen  131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN-------VMETVRDVTFLHNEQFFAVAQ-KKYVYVYDNNGTE  202 (545)
T ss_pred             CCeeeeecCCccEEEecCCccceeeeecccceeeeeee-------hhhhhhhhhhhcchHHHHhhh-hceEEEecCCCcE
Confidence            35789999999999999999999999999998887765       344788899998888888876 5789999999999


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      ++.++.| ..|..+.|.|..-+|++++..|.++.-|+.+|+.+..+..-.+.+..++-+|-+..+-+|...|+|.+|...
T Consensus       203 lHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~  281 (545)
T KOG1272|consen  203 LHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPN  281 (545)
T ss_pred             Eeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCC
Confidence            9999876 578899999998889999999999999999999999998888899999999999999999999999999999


Q ss_pred             CCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        304 EESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       304 ~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                      +..++ .+..|.+++..+... .+.+++|.+.|..++|||+++...++++...+.          ...+++|..| +||.
T Consensus       282 skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~----------a~~ls~Sqkg-lLA~  350 (545)
T KOG1272|consen  282 SKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHP----------ASNLSLSQKG-LLAL  350 (545)
T ss_pred             CcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCC----------cccccccccc-ceee
Confidence            88777 788899999888776 577899999999999999999887777765332          6778888665 5555


Q ss_pred             ecCCCcEEEEE-cCCC--ceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        382 GSYDGCVKLWK-ITPK--RTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       382 ~~~dg~v~iwd-~~~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      +-.+ .|.||. ...+  ..-..+-.+...++|..+.|.|-...|-+|
T Consensus       351 ~~G~-~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIG  397 (545)
T KOG1272|consen  351 SYGD-HVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIG  397 (545)
T ss_pred             ecCC-eeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeecc
Confidence            5444 699995 3221  222222222356789999999976666555

>KOG2110|consensus

Probab=99.79  E-value=1.9e-16  Score=134.04  Aligned_cols=236  Identities=17%  Similarity=0.257  Sum_probs=174.0

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYV  266 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~  266 (454)
                      ...+..+.|+.+...|..|+.+| .++|.. ..............|.-+-|+  ..+++..+.+.  .++++++..+..+
T Consensus         5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~I   81 (391)
T KOG2110|consen    5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTI   81 (391)
T ss_pred             CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceE
Confidence            34677788999999999999988 567776 222222222233445556665  45666666544  4999999888777


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-E---EccccCCeEEEEecC-CCEEEEEe--CCCCEEE
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-V---FNGHSRGIDMTRRVN-DQQFITCG--EDGTLSL  339 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~---~~~~~~~i~~~~~~~-~~~l~~~~--~dg~i~i  339 (454)
                      ..+. ...+|.++.++  .+.|+++-. ..|+|||++..+.+ .   ...+..++..+...+ +.+++.-+  ..|.|.+
T Consensus        82 Ce~~-fpt~IL~VrmN--r~RLvV~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l  157 (391)
T KOG2110|consen   82 CEIF-FPTSILAVRMN--RKRLVVCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVL  157 (391)
T ss_pred             EEEe-cCCceEEEEEc--cceEEEEEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEE
Confidence            7664 56778888885  445555544 45999999998887 2   223444444443333 33665433  6799999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc-EEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC-VKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      ||+.+-+++..+..         |.+.+.+++|+++|.+|||+|..|+ ||||.+.+|..+..++.......|.+++|+|
T Consensus       158 ~d~~nl~~v~~I~a---------H~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~  228 (391)
T KOG2110|consen  158 FDTINLQPVNTINA---------HKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSP  228 (391)
T ss_pred             EEcccceeeeEEEe---------cCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECC
Confidence            99999999998875         4555999999999999999999997 7999999999998887655567799999999


Q ss_pred             CCCEEEEEecCCCceeeeeeeCCC
Q psy17902        419 DHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |+++|+++ |..++|.+++.....
T Consensus       229 ds~~L~~s-S~TeTVHiFKL~~~~  251 (391)
T KOG2110|consen  229 DSQFLAAS-SNTETVHIFKLEKVS  251 (391)
T ss_pred             CCCeEEEe-cCCCeEEEEEecccc
Confidence            99999888 899999999876543

>KOG4227|consensus

Probab=99.79  E-value=1.7e-17  Score=141.23  Aligned_cols=249  Identities=15%  Similarity=0.202  Sum_probs=182.5

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-------CccEEee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSS-------LEHLHTF-TGHKAPITGLAISFECDTLYSSSNDRSIKVW  258 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-------~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  258 (454)
                      .+|.+.|.++.|+.++++|++|+.|..+++|++.       .+++... ..|...|.|++|...+..|++|..+++|...
T Consensus        53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H  132 (609)
T KOG4227|consen   53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH  132 (609)
T ss_pred             hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence            4789999999999999999999999999999972       2334333 3466899999999999999999999999999


Q ss_pred             eCCCceeEEEeec--cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE-E---EEccccCCeEEEEecC--CCEEEE
Q psy17902        259 NIEDRAYVETLFG--HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ-L---VFNGHSRGIDMTRRVN--DQQFIT  330 (454)
Q Consensus       259 d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~---~~~~~~~~i~~~~~~~--~~~l~~  330 (454)
                      |+++.+.+..+..  ..+.|+.+..+|..+.|++.+.++.|.+||.+.... .   ...........+.|.+  ..+|++
T Consensus       133 DiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~  212 (609)
T KOG4227|consen  133 DIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILV  212 (609)
T ss_pred             ecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEe
Confidence            9999988776632  235899999999999999999999999999987552 2   2223333444444543  457888


Q ss_pred             EeCCCCEEEEecCCCc-cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC---
Q psy17902        331 CGEDGTLSLWSILKKV-PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP---  406 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~---  406 (454)
                      .+..+-+.+||++... ++.......+.   ......-.++.|+|+|+.|++--....-.+||+.+.++...-..+.   
T Consensus       213 ~~~~~G~~~~D~R~~~~~~~~~~~~~~L---~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~G  289 (609)
T KOG4227|consen  213 NSETGGPNVFDRRMQARPVYQRSMFKGL---PQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNG  289 (609)
T ss_pred             ccccCCCCceeeccccchHHhhhccccC---cccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCc
Confidence            8899999999997653 33333222221   1112224678899999988887777777889988754432222111   


Q ss_pred             --CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        407 --LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       407 --~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                        ....+.+++|.-|-. +++| +++-.|.+|....
T Consensus       290 Y~N~~T~KS~~F~~D~~-v~tG-SD~~~i~~WklP~  323 (609)
T KOG4227|consen  290 YCNIKTIKSMTFIDDYT-VATG-SDHWGIHIWKLPR  323 (609)
T ss_pred             ceeeeeeeeeeeeccee-eecc-CcccceEEEecCC
Confidence              123477888886543 6666 8999999998754

>KOG2110|consensus

Probab=99.79  E-value=2.5e-15  Score=127.44  Aligned_cols=235  Identities=17%  Similarity=0.204  Sum_probs=176.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC--CcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN--SNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~v~vw~  218 (454)
                      ....|..+.|+.+...|..|+.|| .++|+.+.........      .....|.-+-|+..  ++|..+.+  ..+++++
T Consensus         4 ~~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~------~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~   74 (391)
T KOG2110|consen    4 KKPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKD------TEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVH   74 (391)
T ss_pred             CCcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhccc------CCCeEEEEeecccc--eeEEEecCCCceEEEEE
Confidence            445688888999999999999988 6778777654422111      23335666667654  55555543  4588888


Q ss_pred             CC-CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec---cCCceeEEEeecCCCEEEEee--
Q psy17902        219 SS-LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG---HQSAITSLDILAKNRVISSGG--  292 (454)
Q Consensus       219 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~--  292 (454)
                      +. ...+..+. ...+|.++.++.  +.|+++-.+. |+|||+++.+.+.++..   +...+.++++++.+.+++.-+  
T Consensus        75 ~Kk~~~ICe~~-fpt~IL~VrmNr--~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~  150 (391)
T KOG2110|consen   75 FKKKTTICEIF-FPTSILAVRMNR--KRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGST  150 (391)
T ss_pred             cccCceEEEEe-cCCceEEEEEcc--ceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCC
Confidence            83 33343333 456888898874  4677766544 99999999999887753   455576777777777887532  


Q ss_pred             CCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCC-EEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGT-LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      ..|.|.+||+.+-+.. .+..|.+.+.++.++ +|.+|++++..|+ ||||.+.+++.+..+.....       ...|.+
T Consensus       151 t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~-------~~~IyS  223 (391)
T KOG2110|consen  151 TSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY-------PVSIYS  223 (391)
T ss_pred             CCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCce-------eeEEEE
Confidence            4689999999988877 788999999998887 5678889998886 69999999999998876543       334999


Q ss_pred             EEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        370 VACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      ++|+|++.+|++.+..++|++|.+..
T Consensus       224 L~Fs~ds~~L~~sS~TeTVHiFKL~~  249 (391)
T KOG2110|consen  224 LSFSPDSQFLAASSNTETVHIFKLEK  249 (391)
T ss_pred             EEECCCCCeEEEecCCCeEEEEEecc
Confidence            99999999999999999999999864

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.79  E-value=1.4e-17  Score=156.56  Aligned_cols=233  Identities=11%  Similarity=0.038  Sum_probs=158.8

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEE
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAI  239 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~  239 (454)
                      +..|.+||.+.... ..+.      .+...+...+|+|+|+.|+.++.+   ..|++||+.+.....+....+....++|
T Consensus       183 ~~~i~i~d~dg~~~-~~lt------~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~w  255 (429)
T PRK01742        183 PYEVRVADYDGFNQ-FIVN------RSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAF  255 (429)
T ss_pred             eEEEEEECCCCCCc-eEec------cCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeE
Confidence            46899999876543 2222      355679999999999999887653   4699999954333223323333456899


Q ss_pred             cCCCCEEEEEe-CCCcEEE--EeCCCceeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEeeccC--CeEEEEccc
Q psy17902        240 SFECDTLYSSS-NDRSIKV--WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWKIQE--ESQLVFNGH  313 (454)
Q Consensus       240 ~~~~~~l~~~~-~dg~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~--~~~~~~~~~  313 (454)
                      +|||+.|+.++ .+|.+.|  ||+.++.. ..+..+...+.+..|+|+|+.|+.++ .+|...||++..  +..... .+
T Consensus       256 SPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~  333 (429)
T PRK01742        256 SPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GG  333 (429)
T ss_pred             CCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cC
Confidence            99999888765 6776555  56666553 45556777788999999998766544 578888887753  222222 33


Q ss_pred             cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        314 SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       314 ~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      .. ....+.+++..++..+.++ +.+||+.++........ .          ....+.|+|+|++|+.++.+|.+.+|.+
T Consensus       334 ~~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-~----------~~~~~~~sPdG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        334 RG-YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST-F----------LDESPSISPNGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             CC-CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC-C----------CCCCceECCCCCEEEEEEcCCCceEEEE
Confidence            22 2334456777887777654 66699988764322111 1          0345789999999999999998888876


Q ss_pred             C--CCceeeEeccCCCceeeeEEEEcCC
Q psy17902        394 T--PKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       394 ~--~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      .  ++.....+..  +.+.+...+|||-
T Consensus       401 ~~~~G~~~~~l~~--~~g~~~~p~wsp~  426 (429)
T PRK01742        401 VSADGRFKARLPG--SDGQVKFPAWSPY  426 (429)
T ss_pred             EECCCCceEEccC--CCCCCCCcccCCC
Confidence            3  4677777765  6677889999985

>KOG1523|consensus

Probab=99.78  E-value=5.2e-17  Score=134.90  Aligned_cols=233  Identities=17%  Similarity=0.232  Sum_probs=174.3

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCC----CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC-CCc-
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSS----LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI-EDR-  263 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~-~~~-  263 (454)
                      ..+|+|.+|++++..+|++..+..|.||...    .+..+++..|...|+++.|+|..+.|++++.|..-++|.. ..+ 
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~   89 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT   89 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence            3589999999999999999999999999983    3457889999999999999999999999999999999998 333 


Q ss_pred             -eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEEecC-CCEEEEEeCCCC
Q psy17902        264 -AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTRRVN-DQQFITCGEDGT  336 (454)
Q Consensus       264 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~~-~~~l~~~~~dg~  336 (454)
                       ++...+..+....+++.|+|.++.|++|+.-..|.||-+....--     .-..+...|.++.|++ +-+|++|+.|+.
T Consensus        90 WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k  169 (361)
T KOG1523|consen   90 WKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGK  169 (361)
T ss_pred             eccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcc
Confidence             334455678899999999999999999999999999988765443     2233445566666665 456778889999


Q ss_pred             EEEEecCCC----ccc-----eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc-eeeEeccCC
Q psy17902        337 LSLWSILKK----VPT-----HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR-TLEFLQDIP  406 (454)
Q Consensus       337 i~iwd~~~~----~~~-----~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~  406 (454)
                      ++||..--.    ++.     ..++...-........+++..+.|+|+|..|+-.+.|++|.+-|..... .+..+..  
T Consensus       170 ~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~--  247 (361)
T KOG1523|consen  170 CRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVAT--  247 (361)
T ss_pred             eeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhh--
Confidence            999975211    000     0001000000111457889999999999999999999999999987663 3444433  


Q ss_pred             CceeeeEEEEcCCCCEEE
Q psy17902        407 LSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       407 ~~~~v~~l~~s~d~~~l~  424 (454)
                      ..-+..++.|-.+...++
T Consensus       248 ~~lP~ls~~~ise~~vv~  265 (361)
T KOG1523|consen  248 AQLPLLSVSWISENSVVA  265 (361)
T ss_pred             ccCCceeeEeecCCceee
Confidence            236677888876544333

>KOG0290|consensus

Probab=99.77  E-value=4.8e-17  Score=133.24  Aligned_cols=237  Identities=11%  Similarity=0.195  Sum_probs=174.8

Q ss_pred             CCCCeEEEEEcCCC-----CEEEEEeCCCeEEEEEcCCCc--eecccC-CcccCCCCCCceEEEEEeC-CCcEEEEecCC
Q psy17902        141 HRASITCIAVTSDS-----KHVYSACKDGIIIKWLLETRS--KVCSSP-FVKTDRKSYPPILALAVAN-NNELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~-----~~l~~~~~dg~i~iwd~~~~~--~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  211 (454)
                      |.-+++.+.|.|+.     .+|||++  ..+++|.+....  ...... .......+..++++..|+. +.++|.+++-|
T Consensus        95 ~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD  172 (364)
T KOG0290|consen   95 HPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID  172 (364)
T ss_pred             CCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc
Confidence            89999999999975     3566654  489999987422  111111 1112335677999999987 67789999999


Q ss_pred             CcEEEEeCCCc----cEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeec---cCCceeEEEeec
Q psy17902        212 SNIKLWSSSLE----HLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFG---HQSAITSLDILA  283 (454)
Q Consensus       212 g~v~vw~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~  283 (454)
                      .+..|||+...    ....+..|...|..++|...+ +.|++++.||.|++||++.......+..   ...+...++|++
T Consensus       173 TTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnk  252 (364)
T KOG0290|consen  173 TTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNK  252 (364)
T ss_pred             CeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCc
Confidence            99999999332    355678899999999999854 6889999999999999998765444432   245678899987


Q ss_pred             CC-CEEEEeeCC-CcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCcc------ceee
Q psy17902        284 KN-RVISSGGTD-KSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVP------THTI  351 (454)
Q Consensus       284 ~~-~~l~~~~~d-g~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~------~~~~  351 (454)
                      .. +++++-..| ..|.|.|++.....  .+.+|...|+.+.|.+  ...+++++.|..+.+||+...-.      +..+
T Consensus       253 qDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay  332 (364)
T KOG0290|consen  253 QDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAY  332 (364)
T ss_pred             CCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhh
Confidence            65 677765554 57999999987655  7899999999988875  56899999999999999965322      1111


Q ss_pred             ecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEE
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKL  390 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~i  390 (454)
                      .          ....|+.+.|++ .+++|+.+... ++.+
T Consensus       333 ~----------a~~EVNqi~Ws~~~~Dwiai~~~k-klei  361 (364)
T KOG0290|consen  333 T----------AGGEVNQIQWSSSQPDWIAICFGK-KLEI  361 (364)
T ss_pred             h----------ccceeeeeeecccCCCEEEEEecC-eeeE
Confidence            1          233499999996 55688877654 4444

>KOG1524|consensus

Probab=99.77  E-value=2.3e-17  Score=145.94  Aligned_cols=210  Identities=13%  Similarity=0.149  Sum_probs=171.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAP  233 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~  233 (454)
                      ...|+.++.||.+.|.+-. +.....+.      .|.+.|.+-.|+|+|.-|++++.||.|++|.-++-...++.....+
T Consensus        75 ~d~~~i~s~DGkf~il~k~-~rVE~sv~------AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGMLRStl~Q~~~~  147 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNKS-ARVERSIS------AHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGMLRSTVVQNEES  147 (737)
T ss_pred             cceEEEEcCCceEEEeccc-chhhhhhh------hhhhhhhhcccCCCCceeeeecCCceEEEEeccchHHHHHhhcCce
Confidence            3578888899999988644 34444444      6999999999999999999999999999999888777777778889


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc
Q psy17902        234 ITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH  313 (454)
Q Consensus       234 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~  313 (454)
                      |.|++|.|+.+.++.+- .+.+.|=.+.....+..++.|.+-|.++.|++..+++++|+.|-..+|||...........|
T Consensus       148 v~c~~W~p~S~~vl~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~~Lf~S~~~  226 (737)
T KOG1524|consen  148 IRCARWAPNSNSIVFCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGANLFTSAAE  226 (737)
T ss_pred             eEEEEECCCCCceEEec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccCcccccCChh
Confidence            99999999887666553 35677777777777778899999999999999999999999999999999988777788889


Q ss_pred             cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        314 SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       314 ~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      ..+|+.+.|.++..++.++.+ +++            +..        +..+.|..++||+||..+++|+..|.|.+=.
T Consensus       227 ey~ITSva~npd~~~~v~S~n-t~R------------~~~--------p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~  284 (737)
T KOG1524|consen  227 EYAITSVAFNPEKDYLLWSYN-TAR------------FSS--------PRVGSIFNLSWSADGTQATCGTSTGQLIVAY  284 (737)
T ss_pred             ccceeeeeeccccceeeeeee-eee------------ecC--------CCccceEEEEEcCCCceeeccccCceEEEee
Confidence            999999999988777766632 233            111        1233499999999999999999999876543

>KOG2321|consensus

Probab=99.77  E-value=2e-16  Score=141.25  Aligned_cols=275  Identities=11%  Similarity=0.150  Sum_probs=198.3

Q ss_pred             CCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |...-+.|..+|||+|+ |+|..--.|++||+.+......-.+      ....|.-.-++.|-..++.-..|.+|.+...
T Consensus        50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhl------Dae~V~feiLsDD~SK~v~L~~DR~IefHak  123 (703)
T KOG2321|consen   50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHL------DAEVVDFEILSDDYSKSVFLQNDRTIEFHAK  123 (703)
T ss_pred             CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecc------cccceeEEEeccchhhheEeecCceeeehhh
Confidence            78888999999999976 5667778999999987654433221      2234444445555555555566777766544


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      -+.... +. -...-..++++.-..-|++++....|+-++++.|..+..+....+.++++..++-..+|++|+.+|.|..
T Consensus       124 ~G~hy~-~R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEf  201 (703)
T KOG2321|consen  124 YGRHYR-TR-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEF  201 (703)
T ss_pred             cCeeee-ee-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEE
Confidence            222211 11 1123345666544444666666677999999999999999888899999999999999999999999999


Q ss_pred             eeccCCeEE-------EEccccC-----CeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        300 WKIQEESQL-------VFNGHSR-----GIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       300 ~d~~~~~~~-------~~~~~~~-----~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      ||.+.....       ....|..     .++.+.|.+ +-.+++|+.+|.+.|||++..+++.......        .-+
T Consensus       202 wDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~--------e~p  273 (703)
T KOG2321|consen  202 WDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGY--------ELP  273 (703)
T ss_pred             ecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCC--------ccc
Confidence            999976554       1112222     378888887 5678899999999999999999887765333        233


Q ss_pred             EEEEEEecC--CCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        367 ITSVACLHN--SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       367 i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      |..+.|.+.  ++.|++.. ...++|||-.+|+....+.   ....++.+|+-|++.+++++ -.++.+..+
T Consensus       274 i~~l~~~~~~~q~~v~S~D-k~~~kiWd~~~Gk~~asiE---pt~~lND~C~~p~sGm~f~A-ne~~~m~~y  340 (703)
T KOG2321|consen  274 IKKLDWQDTDQQNKVVSMD-KRILKIWDECTGKPMASIE---PTSDLNDFCFVPGSGMFFTA-NESSKMHTY  340 (703)
T ss_pred             eeeecccccCCCceEEecc-hHHhhhcccccCCceeecc---ccCCcCceeeecCCceEEEe-cCCCcceeE
Confidence            899999876  34555554 4579999999999888876   45569999999999999988 555555443

>KOG1523|consensus

Probab=99.76  E-value=4.7e-16  Score=129.26  Aligned_cols=203  Identities=16%  Similarity=0.114  Sum_probs=160.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      -..+|+|.+|++|...+|++.....|.||.........   ...+...|...|++++|+|..+.|++|+.|..-+||.. 
T Consensus         9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~---~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~   85 (361)
T KOG1523|consen    9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWE---PAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQP   85 (361)
T ss_pred             ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCce---eceehhhhCcceeEEeecCCCCceeEccCCCCccccccC
Confidence            55789999999999999999999999999877654221   12222368899999999999999999999999999998 


Q ss_pred             C---CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE----EEeeccCCceeEEEeecCCCEEEEee
Q psy17902        220 S---LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV----ETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       220 ~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      .   .++...+..++...+++.|+|.++.|++|+.-..|.||-++...-.    +.-+.+.+.|++++|+|++-+|++|+
T Consensus        86 ~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs  165 (361)
T KOG1523|consen   86 SGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGS  165 (361)
T ss_pred             CCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecccc
Confidence            3   3455667779999999999999999999999999999988765432    12235778899999999999999999


Q ss_pred             CCCcEEEeeccC------------C------eEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCc
Q psy17902        293 TDKSVRVWKIQE------------E------SQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       293 ~dg~i~i~d~~~------------~------~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      .|+..+||..--            +      ..+ .+....+.+..+.|+ .++.|+-.+.|+.+.+-|.....
T Consensus       166 ~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~  239 (361)
T KOG1523|consen  166 TDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS  239 (361)
T ss_pred             cCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence            999999997521            0      111 222334455555554 68899999999999999886654

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.76  E-value=2.3e-15  Score=136.87  Aligned_cols=289  Identities=12%  Similarity=0.058  Sum_probs=184.7

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d  211 (454)
                      ...+..  ....-..+.|+|||+++++++.||.|.++|+.+.+.+..+..       .....+++++++|+++++++ ..
T Consensus        29 ~~~i~~--~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~-------G~~~~~i~~s~DG~~~~v~n~~~   99 (369)
T PF02239_consen   29 VARIPT--GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV-------GGNPRGIAVSPDGKYVYVANYEP   99 (369)
T ss_dssp             EEEEE---STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--------SSEEEEEEE--TTTEEEEEEEET
T ss_pred             EEEEcC--CCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec-------CCCcceEEEcCCCCEEEEEecCC
Confidence            344443  333334578999999999999999999999999998887763       33678899999999998876 47


Q ss_pred             CcEEEEeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEE-EeeccCCceeEEEe
Q psy17902        212 SNIKLWSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVE-TLFGHQSAITSLDI  281 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~  281 (454)
                      +.+.++|. +.+.+..+...       ...+.++..+|....++..-. .+.|.+.|......+. .............|
T Consensus       100 ~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~  179 (369)
T PF02239_consen  100 GTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGF  179 (369)
T ss_dssp             TEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE
T ss_pred             CceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeeccccccccccc
Confidence            99999998 66777766432       346788888888886665555 4888888877654332 23334556778999


Q ss_pred             ecCCCEEEE-eeCCCcEEEeeccCCeEEEEc-----cccCCeEEEEec----------CCCEEEEEeCCCCEEEEecCCC
Q psy17902        282 LAKNRVISS-GGTDKSVRVWKIQEESQLVFN-----GHSRGIDMTRRV----------NDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       282 ~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~-----~~~~~i~~~~~~----------~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                      +|+++++++ ...+..|-++|..+++.....     .|......+..+          .+...++.-....+.+||....
T Consensus       180 dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w  259 (369)
T PF02239_consen  180 DPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW  259 (369)
T ss_dssp             -TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT
T ss_pred             CcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcC
Confidence            999988765 456778999999988776321     233333222222          2222333334446667899999


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe----cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG----SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      +.+.+++...+          -.-+..+|+++++.+.    ...++|.++|..+.+....+... ....+..+.|++||+
T Consensus       260 kvv~~I~~~G~----------glFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~-~~~~~~h~ef~~dG~  328 (369)
T PF02239_consen  260 KVVKTIPTQGG----------GLFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPG-PGKRVVHMEFNPDGK  328 (369)
T ss_dssp             SEEEEEE-SSS----------S--EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHH-HT--EEEEEE-TTSS
T ss_pred             eEEEEEECCCC----------cceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEecc-CCCcEeccEECCCCC
Confidence            99998886432          2557789999999988    44578999999988777666531 123488999999999


Q ss_pred             EEEEEecCCC-ceeeeeeeCC
Q psy17902        422 HLVAGIGTEH-RFGRWKTIKG  441 (454)
Q Consensus       422 ~l~~~~~~d~-~i~~W~~~~~  441 (454)
                      ++.++.-+.+ .|.++|..+.
T Consensus       329 ~v~vS~~~~~~~i~v~D~~Tl  349 (369)
T PF02239_consen  329 EVWVSVWDGNGAIVVYDAKTL  349 (369)
T ss_dssp             EEEEEEE--TTEEEEEETTTT
T ss_pred             EEEEEEecCCCEEEEEECCCc
Confidence            9887755544 7999987654

...

>KOG1007|consensus

Probab=99.76  E-value=7.1e-17  Score=132.16  Aligned_cols=219  Identities=18%  Similarity=0.275  Sum_probs=158.7

Q ss_pred             CCcEEEEeC--CCcc--EEeecccCCCeEEEEEcCCC-CEEEEEeCC-------CcEEEEeCCCc---------eeEEEe
Q psy17902        211 NSNIKLWSS--SLEH--LHTFTGHKAPITGLAISFEC-DTLYSSSND-------RSIKVWNIEDR---------AYVETL  269 (454)
Q Consensus       211 dg~v~vw~~--~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d-------g~i~iwd~~~~---------~~~~~~  269 (454)
                      ++.|.+..+  .+..  ...|..|.+.|..++-+|-. ..|+++..+       ..+.||.+...         +++..+
T Consensus        39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L  118 (370)
T KOG1007|consen   39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL  118 (370)
T ss_pred             cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence            577887776  2222  24567788999999999955 455555431       24779988542         223333


Q ss_pred             e-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EE-----ccccCCeEEEEecC--CCEEEEEeCCCCEEE
Q psy17902        270 F-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VF-----NGHSRGIDMTRRVN--DQQFITCGEDGTLSL  339 (454)
Q Consensus       270 ~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~-----~~~~~~i~~~~~~~--~~~l~~~~~dg~i~i  339 (454)
                      . .+-+.|.|+.|.|++..+++-. |..|.+|++.....+  .+     ..+....+...|++  +...+....|+++..
T Consensus       119 dteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~  197 (370)
T KOG1007|consen  119 DTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQF  197 (370)
T ss_pred             CHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEE
Confidence            3 3556899999999998888664 889999999877653  11     11222233333332  334445567999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEc
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      ||+++......+...|+..        +..+.|.|+.+ +|++|+.||.|+|||.+.. .++..+..  |...|.++.|+
T Consensus       198 ~D~RT~~~~~sI~dAHgq~--------vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~--HsHWvW~VRfn  267 (370)
T KOG1007|consen  198 WDLRTMKKNNSIEDAHGQR--------VRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPG--HSHWVWAVRFN  267 (370)
T ss_pred             EEccchhhhcchhhhhcce--------eeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCC--CceEEEEEEec
Confidence            9999998888887766543        99999999887 7899999999999999865 56666665  88999999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |--..|+.++|.|..|.+|....
T Consensus       268 ~~hdqLiLs~~SDs~V~Lsca~s  290 (370)
T KOG1007|consen  268 PEHDQLILSGGSDSAVNLSCASS  290 (370)
T ss_pred             CccceEEEecCCCceeEEEeccc
Confidence            98777777769999999998644

>KOG2139|consensus

Probab=99.76  E-value=9.4e-16  Score=129.52  Aligned_cols=286  Identities=13%  Similarity=0.100  Sum_probs=180.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC-cEEEEecCCCcEEEEeCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN-ELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~~  220 (454)
                      .-.+..++|++.-..+|++..|-.|++|+-.. .....+..     .....|+|++|-|.+ ..|++|+. +-|.+|..+
T Consensus        98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks-----~sQrnvtclawRPlsaselavgCr-~gIciW~~s  170 (445)
T KOG2139|consen   98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKS-----VSQRNVTCLAWRPLSASELAVGCR-AGICIWSDS  170 (445)
T ss_pred             hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecc-----hhhcceeEEEeccCCcceeeeeec-ceeEEEEcC
Confidence            34477889999878889999999999998765 22222221     344579999999964 56777776 558999862


Q ss_pred             C-----c----------cEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        221 L-----E----------HLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       221 ~-----~----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      .     .          .+....+| .+|++|.|++||..+++++. |..|.|||+.++..+....-..+.++-+.|+|+
T Consensus       171 ~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPd  249 (445)
T KOG2139|consen  171 RTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPD  249 (445)
T ss_pred             cccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCC
Confidence            1     1          12223445 68999999999999999876 568999999999877655445677889999999


Q ss_pred             CCEEEEeeCCCcEEEeecc-CCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccce---------eee-
Q psy17902        285 NRVISSGGTDKSVRVWKIQ-EESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTH---------TIP-  352 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~---------~~~-  352 (454)
                      +.+|+++.-|+..++|+.. +..........+.+...+|. .+.+|+..+ .|.-++|.+.....-.         ... 
T Consensus       250 gd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~-sgsp~lysl~f~~~~~~~~~~~~~k~~ll  328 (445)
T KOG2139|consen  250 GDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFAC-SGSPRLYSLTFDGEDSVFLRPQSIKRVLL  328 (445)
T ss_pred             CCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEE-cCCceEEEEeecCCCccccCcccceeeee
Confidence            9999999999999999554 33333333344466555555 455444333 3344455442211000         000 


Q ss_pred             -----cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--------cEEEEEcCCCceeeEec-cCCCceeeeEEEEcC
Q psy17902        353 -----VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--------CVKLWKITPKRTLEFLQ-DIPLSGVINSLVFTS  418 (454)
Q Consensus       353 -----~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------~v~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~  418 (454)
                           ......+..--.+.+.+++|.|.|.+||+.-..+        .|.+||....-.+.... ++........++|+|
T Consensus       329 iaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~p  408 (445)
T KOG2139|consen  329 IADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGP  408 (445)
T ss_pred             eccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeee
Confidence                 0000000111234588999999999999875543        36777776543333221 211222245566765


Q ss_pred             ---CCCEEEEEecCCCceeeee
Q psy17902        419 ---DHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       419 ---d~~~l~~~~~~d~~i~~W~  437 (454)
                         +|++|.++ =..|.+..+.
T Consensus       409 l~n~g~lLsia-WsTGriq~yp  429 (445)
T KOG2139|consen  409 LKNEGRLLSIA-WSTGRIQRYP  429 (445)
T ss_pred             cccCCcEEEEE-eccCceEeee
Confidence               45566655 3455555444

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.76  E-value=1.2e-16  Score=150.23  Aligned_cols=220  Identities=12%  Similarity=0.051  Sum_probs=152.1

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-  209 (454)
                      +.+..  |...|.+.+|||+|+.|+.++.+   ..|++||+.++.......       .......++|+|||+.|+++. 
T Consensus       197 ~~lt~--~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~-------~~g~~~~~~wSPDG~~La~~~~  267 (429)
T PRK01742        197 FIVNR--SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVAS-------FRGHNGAPAFSPDGSRLAFASS  267 (429)
T ss_pred             eEecc--CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEec-------CCCccCceeECCCCCEEEEEEe
Confidence            44556  88889999999999999987654   479999998765432211       111234689999999888764 


Q ss_pred             CCCcEEEE--eCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCC
Q psy17902        210 NNSNIKLW--SSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       210 ~dg~v~vw--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~  285 (454)
                      .+|.+.||  |+.+..+..+..+...+.+..|+|+|+.|+.++ .+|...||++... .....+ .+..  .+..|+|+|
T Consensus       268 ~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG  344 (429)
T PRK01742        268 KDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADG  344 (429)
T ss_pred             cCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCC
Confidence            57766655  555666677777777888999999999777655 5788888876432 222222 3443  467899999


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC--CCccceeeecccCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL--KKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~  363 (454)
                      ++|+.++.++ +.+||+.++....+......-...+.+++.+++.++.++.+.+|.+.  ++.....+...         
T Consensus       345 ~~ia~~~~~~-i~~~Dl~~g~~~~lt~~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~---------  414 (429)
T PRK01742        345 KTLVMINGDN-VVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGS---------  414 (429)
T ss_pred             CEEEEEcCCC-EEEEECCCCCeEEecCCCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCC---------
Confidence            9998877755 66699988766543322222234466778899999999988888763  46666666432         


Q ss_pred             CCcEEEEEEecC
Q psy17902        364 PNWITSVACLHN  375 (454)
Q Consensus       364 ~~~i~~~~~s~~  375 (454)
                      ...+...+|+|-
T Consensus       415 ~g~~~~p~wsp~  426 (429)
T PRK01742        415 DGQVKFPAWSPY  426 (429)
T ss_pred             CCCCCCcccCCC
Confidence            233677888874

>KOG2111|consensus

Probab=99.75  E-value=1.4e-14  Score=120.56  Aligned_cols=236  Identities=12%  Similarity=0.200  Sum_probs=165.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCC------CcEE
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNN------SNIK  215 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d------g~v~  215 (454)
                      ....+++|+.|...+++|..+| .+||+++..+........    ...-.+.-|-|-  .++|| +|+.+      ..|.
T Consensus         6 ~~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~----~~G~~~veMLfR--~N~laLVGGg~~pky~pNkvi   78 (346)
T KOG2111|consen    6 PKTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFI----DGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVI   78 (346)
T ss_pred             CceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccc----cCchhhhhHhhh--hceEEEecCCCCCCCCCceEE
Confidence            3456699999999999998776 899998874432222210    011123333332  23443 33332      4799


Q ss_pred             EEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeEEEeec--cCCceeEEEeecCCCEEEE-
Q psy17902        216 LWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYVETLFG--HQSAITSLDILAKNRVISS-  290 (454)
Q Consensus       216 vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~-  290 (454)
                      |||- ...++..+. ...+|.++.+.++  .|++.- .+.|+||... +.+.++.+..  ....+.+++-+.+..+|+. 
T Consensus        79 IWDD~k~~~i~el~-f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafP  154 (346)
T KOG2111|consen   79 IWDDLKERCIIELS-FNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFP  154 (346)
T ss_pred             EEecccCcEEEEEE-eccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcC
Confidence            9996 555555554 6789999999865  566654 5789999987 4455555532  2333444443333445544 


Q ss_pred             eeCCCcEEEeeccCCeE---EEEccccCCeEEEEec-CCCEEEEEeCCCC-EEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        291 GGTDKSVRVWKIQEESQ---LVFNGHSRGIDMTRRV-NDQQFITCGEDGT-LSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~---~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      |-.-|.|.|-|+.....   .....|...|.|+... +|..++++|..|+ |||||..++..+..+.....       ..
T Consensus       155 g~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d-------~A  227 (346)
T KOG2111|consen  155 GFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVD-------RA  227 (346)
T ss_pred             CCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCc-------hh
Confidence            34568999999987665   6889999999999877 5778889998887 79999999999999876542       34


Q ss_pred             cEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        366 WITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      .|.+|+|||++.+||++|..|+|+||.+...
T Consensus       228 ~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~  258 (346)
T KOG2111|consen  228 DIYCIAFSPNSSWLAVSSDKGTLHIFSLRDT  258 (346)
T ss_pred             eEEEEEeCCCccEEEEEcCCCeEEEEEeecC
Confidence            4999999999999999999999999998753

>KOG1517|consensus

Probab=99.74  E-value=2.6e-16  Score=149.82  Aligned_cols=252  Identities=14%  Similarity=0.209  Sum_probs=170.4

Q ss_pred             CCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC-----ceecccCCcc-cCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        141 HRASITCIAVTS--DSKHVYSACKDGIIIKWLLETR-----SKVCSSPFVK-TDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      -...|+.+.+-.  |..++++|+.||.|+||+--..     +.+..+.... ...+..+.-.-++|.....+|++++.-.
T Consensus      1108 ~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r 1187 (1387)
T KOG1517|consen 1108 PDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVR 1187 (1387)
T ss_pred             CCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCee
Confidence            345688888865  4568999999999999963321     1111111000 0011111224567777666666666678


Q ss_pred             cEEEEeCCCcc-EEee-cccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCce---eEEEeeccCCc--eeEEEeecC
Q psy17902        213 NIKLWSSSLEH-LHTF-TGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRA---YVETLFGHQSA--ITSLDILAK  284 (454)
Q Consensus       213 ~v~vw~~~~~~-~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~--v~~~~~~~~  284 (454)
                      .|+|||...+. +..+ .+....|+++.-+. .|+.+++|..||.|++||.+...   .+...+.|+..  |..+.+.+.
T Consensus      1188 ~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~ 1267 (1387)
T KOG1517|consen 1188 SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQ 1267 (1387)
T ss_pred             EEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecC
Confidence            99999994433 3333 34455677766543 47999999999999999987643   45667788877  999999987


Q ss_pred             CC-EEEEeeCCCcEEEeeccCCeEE---EEcccc--C-CeEEEEecCCC-EEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        285 NR-VISSGGTDKSVRVWKIQEESQL---VFNGHS--R-GIDMTRRVNDQ-QFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       285 ~~-~l~~~~~dg~i~i~d~~~~~~~---~~~~~~--~-~i~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      |- .|++|+.+|.|++||++.....   ....|-  + .++++..+... .+++|+. +.|.||++.. ..+..+....+
T Consensus      1268 G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~ 1345 (1387)
T KOG1517|consen 1268 GLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPG 1345 (1387)
T ss_pred             CCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcc
Confidence            74 5999999999999999985322   222222  2 47777777654 5555555 9999999854 33433333322


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      +-.  .....+.|++|+|..-+||+|+.|.+|.||.....
T Consensus      1346 F~~--q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1346 FMG--QRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred             ccc--CcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence            221  23445899999999999999999999999987654

>KOG1272|consensus

Probab=99.74  E-value=7.4e-18  Score=146.49  Aligned_cols=229  Identities=14%  Similarity=0.182  Sum_probs=183.5

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG  271 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  271 (454)
                      ..+.+.++.+|++|+.|+.-|.|..+|+....+..-..-...|..+.|..+.++++++ ....++|||-. |..++.+..
T Consensus       131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~-GtElHClk~  208 (545)
T KOG1272|consen  131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVA-QKKYVYVYDNN-GTELHCLKR  208 (545)
T ss_pred             CCeeeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhh-hhceEEEecCC-CcEEeehhh
Confidence            4667999999999999999999999999544444333456688999999888777776 56789999954 777777765


Q ss_pred             cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCC-CEEEEEeCCCCEEEEecCCCccce
Q psy17902        272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       272 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      | ..|..+.|.|..-+|++++..|.+..-|+.+++.+ .+....+.+..+...+- ..+-+|...|+|.+|......++.
T Consensus       209 ~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv  287 (545)
T KOG1272|consen  209 H-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV  287 (545)
T ss_pred             c-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH
Confidence            5 56899999999999999999999999999999988 56666666666665554 455678899999999999998888


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      .+..         |.++|.+|++.++|+|+||++.|..|+|||++....+.++..   ..+...++||..| .||+  |.
T Consensus       288 KiLc---------H~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t---p~~a~~ls~Sqkg-lLA~--~~  352 (545)
T KOG1272|consen  288 KILC---------HRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT---PHPASNLSLSQKG-LLAL--SY  352 (545)
T ss_pred             HHHh---------cCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec---CCCcccccccccc-ceee--ec
Confidence            7765         455599999999999999999999999999998876666654   3456788998655 4444  46


Q ss_pred             CCceeeeee
Q psy17902        430 EHRFGRWKT  438 (454)
Q Consensus       430 d~~i~~W~~  438 (454)
                      ...|.+|.-
T Consensus       353 G~~v~iw~d  361 (545)
T KOG1272|consen  353 GDHVQIWKD  361 (545)
T ss_pred             CCeeeeehh
Confidence            778889964

>KOG0771|consensus

Probab=99.74  E-value=6.2e-17  Score=139.45  Aligned_cols=193  Identities=19%  Similarity=0.206  Sum_probs=151.1

Q ss_pred             EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-
Q psy17902        194 LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-  271 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  271 (454)
                      .+++|+.+|..|++|+.||.++||++ +...+.....|...|.++.|+|||++|++.+.| ..+||+++++..+..... 
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~  226 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF  226 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence            78999999999999999999999996 778888888999999999999999999999999 899999999977655432 


Q ss_pred             -cCCceeEEEeecCC---C--EEEEeeCCCcEEEeeccCCeE---E---EEccccCCeEEEEe-cCCCEEEEEeCCCCEE
Q psy17902        272 -HQSAITSLDILAKN---R--VISSGGTDKSVRVWKIQEESQ---L---VFNGHSRGIDMTRR-VNDQQFITCGEDGTLS  338 (454)
Q Consensus       272 -~~~~v~~~~~~~~~---~--~l~~~~~dg~i~i~d~~~~~~---~---~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~  338 (454)
                       .......+.|+.++   .  +++....-+.|+.|++.....   .   ........++++.. .++.+++.|+.||.|.
T Consensus       227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa  306 (398)
T KOG0771|consen  227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA  306 (398)
T ss_pred             ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence             23345567777665   2  333344456777777653222   1   22222334555554 4678889999999999


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      |++..+.+.++.++..|.        ..|+.+.|+|+.+++++.+.+....+..+.-
T Consensus       307 i~~~~~lq~~~~vk~aH~--------~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  307 IYDAKSLQRLQYVKEAHL--------GFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             EEEeceeeeeEeehhhhe--------eeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            999999888888876554        3499999999999999999999999988764

>KOG4497|consensus

Probab=99.73  E-value=6e-15  Score=123.23  Aligned_cols=270  Identities=15%  Similarity=0.175  Sum_probs=187.6

Q ss_pred             CCeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeCC
Q psy17902        143 ASITCIAVTSDSKHVYS-ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSSS  220 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~  220 (454)
                      +.|..+-|..+.-+++. ...++.|.+|++...+-...+.      ....++.++.|||+|+ .|.+...+-.|.||.+.
T Consensus        49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckId------eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~  122 (447)
T KOG4497|consen   49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKID------EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLN  122 (447)
T ss_pred             HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEec------cCCCcceeeeECCCcceEeeeecceeEEEEEEec
Confidence            45778888888776665 4677899999999887777666      3667899999999995 55566668899999997


Q ss_pred             CccEEeecccCCCeEEEEEcCCCCEEEEEeCC------------------------------------CcEEEEeCCCce
Q psy17902        221 LEHLHTFTGHKAPITGLAISFECDTLYSSSND------------------------------------RSIKVWNIEDRA  264 (454)
Q Consensus       221 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------------------------------g~i~iwd~~~~~  264 (454)
                      ++....++.....+..++|+|+|++.+.++.-                                    ..+.+||---.-
T Consensus       123 t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Ley  202 (447)
T KOG4497|consen  123 TQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEY  202 (447)
T ss_pred             cceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhh
Confidence            77666666556677899999999987776542                                    223344422111


Q ss_pred             eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--------------------------------EE--
Q psy17902        265 YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--------------------------------VF--  310 (454)
Q Consensus       265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------------------------~~--  310 (454)
                      .+.. ....-.+..+.|+|.+++|++|+.|+.+||.+--+-+..                                .+  
T Consensus       203 kv~a-Ye~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p  281 (447)
T KOG4497|consen  203 KVYA-YERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTP  281 (447)
T ss_pred             eeee-eeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCC
Confidence            1111 123457889999999999999999999988653111100                                00  


Q ss_pred             ---------------------------------ccccCCeEEEEecCCCEEEEEeCC---CCEEEEecCCCccceeeecc
Q psy17902        311 ---------------------------------NGHSRGIDMTRRVNDQQFITCGED---GTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       311 ---------------------------------~~~~~~i~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~  354 (454)
                                                       .....++..+.|+.+.++++.-.|   ..+-+||++..+....+.. 
T Consensus       282 ~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQ-  360 (447)
T KOG4497|consen  282 TDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQ-  360 (447)
T ss_pred             CccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhh-
Confidence                                             001123455666666666655544   4688999987765544432 


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF  433 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i  433 (454)
                               ..+|....|+|....|+.+.....+++|.......+..-.   .+-.|..++|.-+|..|+.. |.|.-.
T Consensus       361 ---------k~piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~---~GF~i~~l~W~~~g~~i~l~-~kDafc  426 (447)
T KOG4497|consen  361 ---------KHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPK---KGFNIQKLQWLQPGEFIVLC-GKDAFC  426 (447)
T ss_pred             ---------ccceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCC---CCceeeeEEecCCCcEEEEE-cCCceE
Confidence                     2239999999999888888777889999876544443322   44679999999999999988 666543

>KOG2111|consensus

Probab=99.72  E-value=6.7e-15  Score=122.46  Aligned_cols=234  Identities=12%  Similarity=0.176  Sum_probs=161.8

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCC-ccEEeecccCCCeEEEEEcCCCCEEEE-EeCC------CcEEEEeCCCc
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSL-EHLHTFTGHKAPITGLAISFECDTLYS-SSND------RSIKVWNIEDR  263 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d------g~i~iwd~~~~  263 (454)
                      ....++|+.|..-+++|..+| .+||+.+. +.......+.+.+.-+...--.++|+. |+.+      ..|.|||=...
T Consensus         7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~   85 (346)
T KOG2111|consen    7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE   85 (346)
T ss_pred             ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence            456699999998888888665 89998832 221122222222222222222345443 3332      47999997667


Q ss_pred             eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCC-eEE---EEccccCCeEEEEecCCC-EEEE-EeCCCCE
Q psy17902        264 AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEE-SQL---VFNGHSRGIDMTRRVNDQ-QFIT-CGEDGTL  337 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~---~~~~~~~~i~~~~~~~~~-~l~~-~~~dg~i  337 (454)
                      .++.++. ...+|.++.+.++  .|++. ..+.|+||..... +.+   .....+.++.++....+. .|+. |-.-|.|
T Consensus        86 ~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gqv  161 (346)
T KOG2111|consen   86 RCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQV  161 (346)
T ss_pred             cEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceE
Confidence            7777764 6789999999754  45444 5678999998843 333   223333444333333333 3333 3366999


Q ss_pred             EEEecCCCccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc-EEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902        338 SLWSILKKVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC-VKLWKITPKRTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       338 ~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~~~~~~~v~~l  414 (454)
                      .|-|+.....-  ..+.         .|...|.|++.+-+|.+|||+|..|+ |||||..+|..+..+........|.+|
T Consensus       162 Qi~dL~~~~~~~p~~I~---------AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~i  232 (346)
T KOG2111|consen  162 QIVDLASTKPNAPSIIN---------AHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCI  232 (346)
T ss_pred             EEEEhhhcCcCCceEEE---------cccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEE
Confidence            99999776552  3333         25666999999999999999999997 899999999999998876667789999


Q ss_pred             EEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        415 VFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       415 ~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +|||+..+|+++ ++-|+|.++....
T Consensus       233 aFSp~~s~Lavs-SdKgTlHiF~l~~  257 (346)
T KOG2111|consen  233 AFSPNSSWLAVS-SDKGTLHIFSLRD  257 (346)
T ss_pred             EeCCCccEEEEE-cCCCeEEEEEeec
Confidence            999999999999 8999999997654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=8.5e-15  Score=137.38  Aligned_cols=232  Identities=9%  Similarity=0.031  Sum_probs=153.6

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEEEeCCCccEEeecccCCCeEEEEEcC
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKLWSSSLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      .|.+||.+....... .      .+...+...+|+|||+.|+..+.   +..|.+|++.+.....+....+.+....|+|
T Consensus       180 ~l~~~d~dg~~~~~l-t------~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SP  252 (429)
T PRK03629        180 ELRVSDYDGYNQFVV-H------RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP  252 (429)
T ss_pred             eEEEEcCCCCCCEEe-e------cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECC
Confidence            788888876543222 1      24457899999999999887542   3578999995544444444444556789999


Q ss_pred             CCCEEEEE-eCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC-C--cEEEeeccCCeEEEEccccC
Q psy17902        242 ECDTLYSS-SNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD-K--SVRVWKIQEESQLVFNGHSR  315 (454)
Q Consensus       242 ~~~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~  315 (454)
                      ||+.|+.. +.+|  .|++||+.++.... +..+...+....|+|+|+.|+..+.+ +  .|+++|+.++....+.....
T Consensus       253 DG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~  331 (429)
T PRK03629        253 DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS  331 (429)
T ss_pred             CCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC
Confidence            99988865 4444  59999998876544 33445567889999999988766653 4  45555666665544433333


Q ss_pred             CeE-EEEecCCCEEEEEeCC---CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc---E
Q psy17902        316 GID-MTRRVNDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC---V  388 (454)
Q Consensus       316 ~i~-~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~---v  388 (454)
                      ... ..+.+++..++..+.+   ..|.+||+.++... .+....          ......|+|||++|+.++.++.   +
T Consensus       332 ~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~----------~~~~p~~SpDG~~i~~~s~~~~~~~l  400 (429)
T PRK03629        332 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTF----------LDETPSIAPNGTMVIYSSSQGMGSVL  400 (429)
T ss_pred             CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCC----------CCCCceECCCCCEEEEEEcCCCceEE
Confidence            332 3445667777765533   35888998777532 222110          1345789999999998887764   6


Q ss_pred             EEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        389 KLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      .++++. +.....+..  +.+.+...+|+|
T Consensus       401 ~~~~~~-G~~~~~l~~--~~~~~~~p~Wsp  427 (429)
T PRK03629        401 NLVSTD-GRFKARLPA--TDGQVKFPAWSP  427 (429)
T ss_pred             EEEECC-CCCeEECcc--CCCCcCCcccCC
Confidence            777774 555566654  667788899987

>KOG3881|consensus

Probab=99.72  E-value=1.6e-15  Score=129.49  Aligned_cols=265  Identities=14%  Similarity=0.170  Sum_probs=187.9

Q ss_pred             CCCCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDS--KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      -...|+.++|.-++  ..|...+.+-.+..+.+..........-.........+|..++.. ++ .|++|..+|.+.+|.
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~  131 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSGNLQVRH  131 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CC-EEEEEecCCcEEEEe
Confidence            45568888887654  345554466677777766554443321111222345567666664 33 677788899999999


Q ss_pred             CC-----CccEEeecccCCCeEEEEEcCCCC-EEEEEeCC--CcEEEEeCCCceeEEEeecc---------CCceeEEEe
Q psy17902        219 SS-----LEHLHTFTGHKAPITGLAISFECD-TLYSSSND--RSIKVWNIEDRAYVETLFGH---------QSAITSLDI  281 (454)
Q Consensus       219 ~~-----~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d--g~i~iwd~~~~~~~~~~~~~---------~~~v~~~~~  281 (454)
                      ..     ...+..+..+ ..+..+.-++... .+++|+..  ..+.+||+++.+.+..-+..         .-.++++.|
T Consensus       132 ~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~F  210 (412)
T KOG3881|consen  132 DKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRF  210 (412)
T ss_pred             ccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeecccee
Confidence            84     4445555544 4566666666544 55568888  88999999988665543321         234678889


Q ss_pred             ecC--CCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCcccee-eeccc
Q psy17902        282 LAK--NRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHT-IPVAH  355 (454)
Q Consensus       282 ~~~--~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~  355 (454)
                      .+.  ...|++++.-+.|++||.+.+...  .+.....+++++. .+.++++++|..-|.+..||++.++.... +... 
T Consensus       211 l~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~-  289 (412)
T KOG3881|consen  211 LEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGI-  289 (412)
T ss_pred             cCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCc-
Confidence            887  788999999999999999976654  5555566676655 45678899999999999999999877665 4332 


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                              .+.|+++..+|.+++||+++-|..|||+|+.+.+++..+.   ....++++.+.++-
T Consensus       290 --------tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY---vKs~lt~il~~~~~  343 (412)
T KOG3881|consen  290 --------TGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY---VKSRLTFILLRDDV  343 (412)
T ss_pred             --------cCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh---hhccccEEEecCCc
Confidence                    3339999999999999999999999999999877766555   45667888886653

>KOG1310|consensus

Probab=99.71  E-value=2.3e-16  Score=140.09  Aligned_cols=215  Identities=16%  Similarity=0.204  Sum_probs=154.8

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee-cccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCC
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF-TGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~  262 (454)
                      .+|.+.|+|++|+.+|.+|++|+.|-.+.|||. ..+.++.+ .+|...|.++.|-|  +...+++|..|..|+++|+..
T Consensus        47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~  126 (758)
T KOG1310|consen   47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDS  126 (758)
T ss_pred             ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEeccc
Confidence            489999999999999999999999999999999 66666555 68999999999998  457899999999999999984


Q ss_pred             ----------ceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-----------EEccccCCeEEE
Q psy17902        263 ----------RAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-----------VFNGHSRGIDMT  320 (454)
Q Consensus       263 ----------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-----------~~~~~~~~i~~~  320 (454)
                                ......+..|...|..|+-.|++ +.+.+++.||+|+-+|++.....           .+...--...++
T Consensus       127 ~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~l  206 (758)
T KOG1310|consen  127 SKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCL  206 (758)
T ss_pred             ccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeee
Confidence                      23344556799999999999998 88999999999999999874322           111111223444


Q ss_pred             Eec--CCCEEEEEeCCCCEEEEecCCCc------------------cceeeecccCCCCCCC-C---CCcEEEEEEecCC
Q psy17902        321 RRV--NDQQFITCGEDGTLSLWSILKKV------------------PTHTIPVAHGYDSSSS-E---PNWITSVACLHNS  376 (454)
Q Consensus       321 ~~~--~~~~l~~~~~dg~i~iwd~~~~~------------------~~~~~~~~~~~~~~~~-~---~~~i~~~~~s~~~  376 (454)
                      ..+  ...+|++|+.|-..++||.+...                  ++..+...+. ..... .   ...++-++|+|+|
T Consensus       207 tisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hl-kn~~gn~~~~~~~~t~vtfnpNG  285 (758)
T KOG1310|consen  207 TISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHL-KNSQGNLDRYITCCTYVTFNPNG  285 (758)
T ss_pred             eecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccc-cCcccccccceeeeEEEEECCCC
Confidence            444  35689999999999999953211                  1112211111 01111 1   1125667899999


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~  402 (454)
                      .-|++.-..-.|++||+..++....+
T Consensus       286 tElLvs~~gEhVYlfdvn~~~~~~~y  311 (758)
T KOG1310|consen  286 TELLVSWGGEHVYLFDVNEDKSPTPY  311 (758)
T ss_pred             cEEEEeeCCeEEEEEeecCCCCceee
Confidence            85554444447999999887554433

>KOG0322|consensus

Probab=99.69  E-value=7.9e-16  Score=124.54  Aligned_cols=234  Identities=15%  Similarity=0.218  Sum_probs=159.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-----C----cEEEEecCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-----N----ELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~----~~l~~~~~d  211 (454)
                      |...|+.+..-|+ ..|.+-+.|+.+.+|++.....+..         |.-.++++-|.+.     +    ..++.-+..
T Consensus        55 g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i---------~Si~~nslgFCrfSl~~~~k~~eqll~yp~rg  124 (323)
T KOG0322|consen   55 GRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISI---------HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRG  124 (323)
T ss_pred             ccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEE---------eeeeccccccccceeccCCCcchhheecCCcc
Confidence            7888999999887 6788889999999999986443322         2223344444331     1    112221111


Q ss_pred             C-cEEEEeC-CCccEEee----cccCCCeEEEEEcC-CC--CEEEEEeCCCcEEEEeCCCcee----------EEEeecc
Q psy17902        212 S-NIKLWSS-SLEHLHTF----TGHKAPITGLAISF-EC--DTLYSSSNDRSIKVWNIEDRAY----------VETLFGH  272 (454)
Q Consensus       212 g-~v~vw~~-~~~~~~~~----~~~~~~v~~~~~~~-~~--~~l~~~~~dg~i~iwd~~~~~~----------~~~~~~~  272 (454)
                      . .+++-|. ....+...    .+..+.+.|..+.. .+  -+|++|..+|.|.+||+.++..          +.....|
T Consensus       125 sde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash  204 (323)
T KOG0322|consen  125 SDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASH  204 (323)
T ss_pred             cchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhc
Confidence            1 1222332 11112211    23456677777543 23  2566788899999999998733          3334569


Q ss_pred             CCceeEEEeecCCCEEEEeeCCCcEEEeeccCC--eEE---EEccccCCeE-EEEecCCCEEEEEeCCCCEEEEecCCCc
Q psy17902        273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEE--SQL---VFNGHSRGID-MTRRVNDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~---~~~~~~~~i~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      ..+|.++.|.+.-..=++|+.+..+..|++...  ...   .......++. .-.-+++..+++++.|+.||||..++..
T Consensus       205 ~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~  284 (323)
T KOG0322|consen  205 KQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN  284 (323)
T ss_pred             cCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCC
Confidence            999999999877666678888889999998753  221   2222223333 3344577789999999999999999999


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ++..+..+         ...|++++|+|+..++|+++.|++|.+|++
T Consensus       285 pLAVLkyH---------sagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  285 PLAVLKYH---------SAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             chhhhhhh---------hcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            99988764         445999999999999999999999999986

>KOG1240|consensus

Probab=99.69  E-value=9e-15  Score=141.68  Aligned_cols=248  Identities=16%  Similarity=0.209  Sum_probs=168.4

Q ss_pred             CCCCceEEEEEeCCC-cEEEEecCCCcEEEEeC---CCc-----cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy17902        188 KSYPPILALAVANNN-ELVASGDNNSNIKLWSS---SLE-----HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW  258 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~---~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw  258 (454)
                      .|...+..++.++.. .++++|+.||+|++|+.   .+.     ...++......+.++.+.+.++.+|+++.||.|.+.
T Consensus      1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~ 1125 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVL 1125 (1431)
T ss_pred             hccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEE
Confidence            477778888887755 99999999999999997   121     223344457789999999999999999999999999


Q ss_pred             eCCCc--e-----eEEEeeccC-Cce-eEEEeec-CCC-EEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEe-c
Q psy17902        259 NIEDR--A-----YVETLFGHQ-SAI-TSLDILA-KNR-VISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRR-V  323 (454)
Q Consensus       259 d~~~~--~-----~~~~~~~~~-~~v-~~~~~~~-~~~-~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~-~  323 (454)
                      +++..  .     +.+....+. +.+ ..-++.. .+. .|+.+...+.|..||+++....   ......+.++.++. +
T Consensus      1126 ~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp 1205 (1431)
T KOG1240|consen 1126 RIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDP 1205 (1431)
T ss_pred             EccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecC
Confidence            98752  1     112222222 223 3333332 233 7778888899999999986654   34444455555554 4


Q ss_pred             CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC---CEE-EEec-CCCcEEEEEcCCCce
Q psy17902        324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS---DLV-ASGS-YDGCVKLWKITPKRT  398 (454)
Q Consensus       324 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l-~~~~-~dg~v~iwd~~~~~~  398 (454)
                      .++.+++|+..|.+.+||++-+.++.....++        ..+|+.+..+|-.   ... .+|+ ..+-|.+|++.+|..
T Consensus      1206 ~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~--------~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~ 1277 (1431)
T KOG1240|consen 1206 WCNWLVIGTSRGQLVLWDLRFRVPILSWEHPA--------RAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR 1277 (1431)
T ss_pred             CceEEEEecCCceEEEEEeecCceeecccCcc--------cCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc
Confidence            57799999999999999999998888776544        2447777777633   344 4444 577899999998854


Q ss_pred             eeEeccC-----------------CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        399 LEFLQDI-----------------PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       399 ~~~~~~~-----------------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      ...+...                 ++.-....+++..-+.++++| |.|..|+.||.......
T Consensus      1278 ~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltg-gsd~kIR~wD~~~p~~s 1339 (1431)
T KOG1240|consen 1278 QTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTG-GSDMKIRKWDPTRPEIS 1339 (1431)
T ss_pred             eEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeec-CCccceeeccCCCcccc
Confidence            4443321                 111122233444445566666 89999999998665444

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.68  E-value=3.3e-14  Score=133.41  Aligned_cols=216  Identities=12%  Similarity=0.029  Sum_probs=145.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCC--cE
Q psy17902        141 HRASITCIAVTSDSKHVYSACK---DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNS--NI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg--~v  214 (454)
                      +...+.+.+|||||+.|+..+.   +..|.+|++.++.......       ....+...+|+|||+.|+.. +.+|  .|
T Consensus       197 ~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~-------~~~~~~~~~~SPDG~~La~~~~~~g~~~I  269 (429)
T PRK03629        197 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-------FPRHNGAPAFSPDGSKLAFALSKTGSLNL  269 (429)
T ss_pred             CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccC-------CCCCcCCeEECCCCCEEEEEEcCCCCcEE
Confidence            6678999999999999987643   3579999998775433221       11234468999999988865 4344  58


Q ss_pred             EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND-R--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      ++||+.+..+..+..+...+....|+|+|+.|+.++.+ +  .|+++|+.++... .+..+.....+..|+|+|++|+..
T Consensus       270 ~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~SpDG~~Ia~~  348 (429)
T PRK03629        270 YVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMV  348 (429)
T ss_pred             EEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEE
Confidence            88999666666666566678889999999988877654 3  4555577766543 333344456678999999988776


Q ss_pred             eCC---CcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCC---EEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        292 GTD---KSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGT---LSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       292 ~~d---g~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      +.+   ..|.+||+.++....+..........+.+++..++.++.++.   +.++++ ++.....+..         +..
T Consensus       349 ~~~~g~~~I~~~dl~~g~~~~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~-~G~~~~~l~~---------~~~  418 (429)
T PRK03629        349 SSNGGQQHIAKQDLATGGVQVLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST-DGRFKARLPA---------TDG  418 (429)
T ss_pred             EccCCCceEEEEECCCCCeEEeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCCeEECcc---------CCC
Confidence            543   358889998877654443222233456677888888887764   566666 3444444432         222


Q ss_pred             cEEEEEEec
Q psy17902        366 WITSVACLH  374 (454)
Q Consensus       366 ~i~~~~~s~  374 (454)
                      .+...+|+|
T Consensus       419 ~~~~p~Wsp  427 (429)
T PRK03629        419 QVKFPAWSP  427 (429)
T ss_pred             CcCCcccCC
Confidence            366677776

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.67  E-value=6.3e-13  Score=121.32  Aligned_cols=276  Identities=12%  Similarity=0.137  Sum_probs=174.4

Q ss_pred             EEEEeCC----CeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----CCcEEEEeCCC--cc-
Q psy17902        157 VYSACKD----GIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----NSNIKLWSSSL--EH-  223 (454)
Q Consensus       157 l~~~~~d----g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~v~vw~~~~--~~-  223 (454)
                      +++|+..    +.|.+|.++  ++........     ........++++|++++|+++..    .|.|..|.+..  .. 
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~-----~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L   76 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTV-----AEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTL   76 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEE-----EESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeee-----cCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCccee
Confidence            4556655    688888873  3322211111     12335667899999999998876    47899999832  22 


Q ss_pred             --EEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCC-ceeEEE---ee----------ccCCceeEEEeecCCC
Q psy17902        224 --LHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIED-RAYVET---LF----------GHQSAITSLDILAKNR  286 (454)
Q Consensus       224 --~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~-~~~~~~---~~----------~~~~~v~~~~~~~~~~  286 (454)
                        +............++++|++++|+++.. +|.|.++++.. +.....   +.          .......++.++|+++
T Consensus        77 ~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~  156 (345)
T PF10282_consen   77 TLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGR  156 (345)
T ss_dssp             EEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSS
T ss_pred             EEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCC
Confidence              2333334456678999999999998874 89999999986 333222   11          1224467899999999


Q ss_pred             EEEEeeC-CCcEEEeeccCCe--EE-----EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecC--CCc--cceeeec
Q psy17902        287 VISSGGT-DKSVRVWKIQEES--QL-----VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSIL--KKV--PTHTIPV  353 (454)
Q Consensus       287 ~l~~~~~-dg~i~i~d~~~~~--~~-----~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~--~~~--~~~~~~~  353 (454)
                      ++++... ...|++|++....  ..     ......++-...+.+++.++++.. .++.|.+|++.  .+.  .+..+..
T Consensus       157 ~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~  236 (345)
T PF10282_consen  157 FVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTIST  236 (345)
T ss_dssp             EEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES
T ss_pred             EEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeee
Confidence            8877543 3479999997655  21     222333344555566667665554 67889999988  332  2222222


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcCC-CceeeEeccCCC-ceeeeEEEEcCCCCEEEEEecCC
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKITP-KRTLEFLQDIPL-SGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~-~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      ...   ..........|.++|+|++|+++. ..++|.+|++.. ...+..+...+. ......++++|+|++|+++...+
T Consensus       237 ~~~---~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s  313 (345)
T PF10282_consen  237 LPE---GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDS  313 (345)
T ss_dssp             CET---TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTT
T ss_pred             ccc---cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCC
Confidence            111   111123588999999999877765 467899999942 223333333222 33478999999999999998889


Q ss_pred             CceeeeeeeC
Q psy17902        431 HRFGRWKTIK  440 (454)
Q Consensus       431 ~~i~~W~~~~  440 (454)
                      +.|.+|+...
T Consensus       314 ~~v~vf~~d~  323 (345)
T PF10282_consen  314 NTVSVFDIDP  323 (345)
T ss_dssp             TEEEEEEEET
T ss_pred             CeEEEEEEeC
Confidence            9999998753

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.67  E-value=1.6e-14  Score=119.44  Aligned_cols=151  Identities=16%  Similarity=0.256  Sum_probs=113.0

Q ss_pred             EEEEEcCCCCEEEEEeC----------CCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEe--cCCC
Q psy17902        146 TCIAVTSDSKHVYSACK----------DGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASG--DNNS  212 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg  212 (454)
                      ..+.|+|+|++|++-..          -|...+|-+... .....+.+     ...++|.+++|+|+|+.+|+.  ..++
T Consensus         9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l-----~~~~~I~~~~WsP~g~~favi~g~~~~   83 (194)
T PF08662_consen    9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIEL-----KKEGPIHDVAWSPNGNEFAVIYGSMPA   83 (194)
T ss_pred             EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeec-----cCCCceEEEEECcCCCEEEEEEccCCc
Confidence            56789999988876543          134566655332 22222221     234579999999999986554  4567


Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND---RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      .|.+||+.+..+..+.  ...++.+.|+|+|++|++|+.+   |.|.+||+++.+.+.... |. .++.++|+|+|++|+
T Consensus        84 ~v~lyd~~~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~  159 (194)
T PF08662_consen   84 KVTLYDVKGKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLA  159 (194)
T ss_pred             ccEEEcCcccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEE
Confidence            9999999877777764  5678899999999999998754   679999999888887763 43 478999999999999


Q ss_pred             EeeC------CCcEEEeeccCC
Q psy17902        290 SGGT------DKSVRVWKIQEE  305 (454)
Q Consensus       290 ~~~~------dg~i~i~d~~~~  305 (454)
                      ++..      |+.++||+....
T Consensus       160 ta~t~~r~~~dng~~Iw~~~G~  181 (194)
T PF08662_consen  160 TATTSPRLRVDNGFKIWSFQGR  181 (194)
T ss_pred             EEEeccceeccccEEEEEecCe
Confidence            8864      678899998643

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=2.2e-14  Score=135.26  Aligned_cols=233  Identities=13%  Similarity=0.051  Sum_probs=153.0

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEc
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAIS  240 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~  240 (454)
                      ..|.+||........ +.      .+...+.+.+|+|+|+.|+.++..   ..|.+|++.+.....+..+.+...+..|+
T Consensus       184 ~~l~i~D~~g~~~~~-lt------~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~S  256 (433)
T PRK04922        184 YALQVADSDGYNPQT-IL------RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFS  256 (433)
T ss_pred             EEEEEECCCCCCceE-ee------cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceEC
Confidence            368889886543322 22      245578899999999999887643   46999999555555555555566688999


Q ss_pred             CCCCEEE-EEeCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CCc--EEEeeccCCeEEEEcccc
Q psy17902        241 FECDTLY-SSSNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DKS--VRVWKIQEESQLVFNGHS  314 (454)
Q Consensus       241 ~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~  314 (454)
                      |+|+.|+ +.+.+|  .|++||+.++... .+..+.......+|+|+|+.|+.++. +|.  |+++++.++....+....
T Consensus       257 pDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g  335 (433)
T PRK04922        257 PDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQG  335 (433)
T ss_pred             CCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCC
Confidence            9998775 445555  5999999887643 45455555678899999998876653 444  677777666554332222


Q ss_pred             CCe-EEEEecCCCEEEEEeCCC---CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---Cc
Q psy17902        315 RGI-DMTRRVNDQQFITCGEDG---TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GC  387 (454)
Q Consensus       315 ~~i-~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~  387 (454)
                      ... ...+.++++.++..+.++   .|.+||+.++... .+.  ..        .......|+|+|++|+..+.+   +.
T Consensus       336 ~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt--~~--------~~~~~p~~spdG~~i~~~s~~~g~~~  404 (433)
T PRK04922        336 NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT--PG--------SLDESPSFAPNGSMVLYATREGGRGV  404 (433)
T ss_pred             CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC--CC--------CCCCCceECCCCCEEEEEEecCCceE
Confidence            222 345556777777665433   5899999776543 221  11        113456899999987766553   35


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      |.++++.. .....+..  +.+.+...+|+|
T Consensus       405 L~~~~~~g-~~~~~l~~--~~g~~~~p~wsp  432 (433)
T PRK04922        405 LAAVSTDG-RVRQRLVS--ADGEVREPAWSP  432 (433)
T ss_pred             EEEEECCC-CceEEccc--CCCCCCCCccCC
Confidence            77888754 44455543  446677888887

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.67  E-value=7.4e-14  Score=131.89  Aligned_cols=233  Identities=7%  Similarity=-0.057  Sum_probs=154.7

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEEEeCCCccEEeecccCCCeEEEEEc
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKLWSSSLEHLHTFTGHKAPITGLAIS  240 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~  240 (454)
                      ..|.+||.+..... .+.      .+...+.+.+|+|||+.|+..+.   +..|.+|++.+.....+..+.+.+.+.+|+
T Consensus       182 ~~l~~~d~dg~~~~-~lt------~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~S  254 (435)
T PRK05137        182 KRLAIMDQDGANVR-YLT------DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFS  254 (435)
T ss_pred             eEEEEECCCCCCcE-EEe------cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEEC
Confidence            37888887654332 222      35668999999999999888753   468999999655556666677788899999


Q ss_pred             CCCCEEE-EEeCCCc--EEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEcccc
Q psy17902        241 FECDTLY-SSSNDRS--IKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHS  314 (454)
Q Consensus       241 ~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~  314 (454)
                      |+|+.|+ +.+.++.  |++||+.++.. ..+..+........|+|+|+.|+..+. +|  .|++||+.++....+....
T Consensus       255 PDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~  333 (435)
T PRK05137        255 PDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGG  333 (435)
T ss_pred             CCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCC
Confidence            9998776 4555554  88889987765 345556666778999999998876653 33  6888888776555443333


Q ss_pred             CCeE-EEEecCCCEEEEEeCC---CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----
Q psy17902        315 RGID-MTRRVNDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----  385 (454)
Q Consensus       315 ~~i~-~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----  385 (454)
                      ..+. ..+.+++..++..+.+   ..|.+||+..+. ...+..  .        ..+..+.|+|+|+.|+..+.+     
T Consensus       334 ~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~--~--------~~~~~p~~spDG~~i~~~~~~~~~~~  402 (435)
T PRK05137        334 GRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTS--G--------FLVEGPTWAPNGRVIMFFRQTPGSGG  402 (435)
T ss_pred             CcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccC--C--------CCCCCCeECCCCCEEEEEEccCCCCC
Confidence            3333 3455677787766543   357888875443 222221  1        115678999999987665442     


Q ss_pred             -CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        386 -GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       386 -g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                       ..|.++++..+.. ..+.   ..+.+...+|+|-
T Consensus       403 ~~~L~~~dl~g~~~-~~l~---~~~~~~~p~Wsp~  433 (435)
T PRK05137        403 APKLYTVDLTGRNE-REVP---TPGDASDPAWSPL  433 (435)
T ss_pred             cceEEEEECCCCce-EEcc---CCCCccCcccCCC
Confidence             2577888765543 3443   2344667788763

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.66  E-value=3.8e-14  Score=133.13  Aligned_cols=234  Identities=12%  Similarity=0.034  Sum_probs=147.2

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEc
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAIS  240 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~  240 (454)
                      ..|.++|....... .+.      .+...+.+.+|+|+|+.|+..+..   ..|.+||+.+.....+....+.+.+..|+
T Consensus       176 ~~L~~~D~dG~~~~-~l~------~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~S  248 (427)
T PRK02889        176 YQLQISDADGQNAQ-SAL------SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWS  248 (427)
T ss_pred             cEEEEECCCCCCce-Eec------cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEEC
Confidence            35667776543222 221      245578899999999998877643   45999999555444454455667789999


Q ss_pred             CCCCEEE-EEeCCCcEEEE--eCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CCcEEEeec--cCCeEEEEcccc
Q psy17902        241 FECDTLY-SSSNDRSIKVW--NIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DKSVRVWKI--QEESQLVFNGHS  314 (454)
Q Consensus       241 ~~~~~l~-~~~~dg~i~iw--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~--~~~~~~~~~~~~  314 (454)
                      |||+.|+ +.+.+|...||  |+.++. ...+..+........|+|+|+.|+..+. +|...+|.+  .++.........
T Consensus       249 PDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g  327 (427)
T PRK02889        249 PDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTG  327 (427)
T ss_pred             CCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCC
Confidence            9998886 45677775555  455444 4445555555677899999998776554 456666654  444433222111


Q ss_pred             C-CeEEEEecCCCEEEEEeCCC---CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC---c
Q psy17902        315 R-GIDMTRRVNDQQFITCGEDG---TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG---C  387 (454)
Q Consensus       315 ~-~i~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~  387 (454)
                      . .....+.+++++++..+.++   .|.+||+.++.... +.  ..        .......|+|+|+.|+.++.++   .
T Consensus       328 ~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt--~~--------~~~~~p~~spdg~~l~~~~~~~g~~~  396 (427)
T PRK02889        328 SYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LT--DT--------TRDESPSFAPNGRYILYATQQGGRSV  396 (427)
T ss_pred             CCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-cc--CC--------CCccCceECCCCCEEEEEEecCCCEE
Confidence            1 22345566788887766554   59999998775432 21  11        1135678999999887776543   3


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +.+.++ ++.....+..  +.+.+...+|+|-
T Consensus       397 l~~~~~-~g~~~~~l~~--~~g~~~~p~wsp~  425 (427)
T PRK02889        397 LAAVSS-DGRIKQRLSV--QGGDVREPSWGPF  425 (427)
T ss_pred             EEEEEC-CCCceEEeec--CCCCCCCCccCCC
Confidence            555565 3455555543  4566778888874

>KOG2394|consensus

Probab=99.66  E-value=5.5e-15  Score=131.17  Aligned_cols=171  Identities=12%  Similarity=0.123  Sum_probs=131.0

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC-cEEEEecCCCcEEEEeCC----------
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN-ELVASGDNNSNIKLWSSS----------  220 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vw~~~----------  220 (454)
                      |.+--|+.|-.-|.|.+.|.........+..  ...-....|+|+.|-|.+ ..++++-.+|.+++||..          
T Consensus       183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne--~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~  260 (636)
T KOG2394|consen  183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNE--ERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSY  260 (636)
T ss_pred             CCCcceEEeeccCceEEecchhhHHHHhhhh--cccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcc
Confidence            4566778888889999988765322221111  111234689999999854 455666678999999741          


Q ss_pred             -----C--------------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902        221 -----L--------------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       221 -----~--------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  281 (454)
                           +              .++..+.--.+.|+.++|+|||++||+.+.||.++|+|..+.+.+..++..-+...|++|
T Consensus       261 ~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcW  340 (636)
T KOG2394|consen  261 QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCW  340 (636)
T ss_pred             cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEE
Confidence                 0              011112223457889999999999999999999999999998888777777788999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN  324 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~  324 (454)
                      +|||++|++|+.|.-|.||.+...+.+ .-.+|...|+.+.|.+
T Consensus       341 SPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  341 SPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             cCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence            999999999999999999999998888 6788999999888875

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.64  E-value=6e-14  Score=132.29  Aligned_cols=201  Identities=13%  Similarity=0.009  Sum_probs=137.1

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ec
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GD  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~  209 (454)
                      +.+..  |...+.+.+|+|+|+.|+.++..   ..|.+|++.++.......       ......+.+|+|+|+.|+. .+
T Consensus       197 ~~lt~--~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~-------~~g~~~~~~~SpDG~~l~~~~s  267 (433)
T PRK04922        197 QTILR--SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVAS-------FRGINGAPSFSPDGRRLALTLS  267 (433)
T ss_pred             eEeec--CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEecc-------CCCCccCceECCCCCEEEEEEe
Confidence            34555  77789999999999999987743   479999998776533221       2223457899999987764 44


Q ss_pred             CCC--cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        210 NNS--NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRS--IKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       210 ~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      .+|  .|++|++.+..+..+..+.......+|+|+|+.|+.++. +|.  |+++++.++.... +..+......++|+|+
T Consensus       268 ~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~~SpD  346 (433)
T PRK04922        268 RDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARASVSPD  346 (433)
T ss_pred             CCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEEECCC
Confidence            454  599999966666667666666678899999998887764 444  7777877665432 2223344557899999


Q ss_pred             CCEEEEeeCCC---cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC---CCEEEEecCC
Q psy17902        285 NRVISSGGTDK---SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED---GTLSLWSILK  344 (454)
Q Consensus       285 ~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d---g~i~iwd~~~  344 (454)
                      |++|+..+.++   .|.+||+.++....+..........+.+++..++..+.+   +.|.++++..
T Consensus       347 G~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g  412 (433)
T PRK04922        347 GKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG  412 (433)
T ss_pred             CCEEEEEECCCCceeEEEEECCCCCeEECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence            99887765433   699999988776644332222334556677777766542   3577777743

>KOG0280|consensus

Probab=99.64  E-value=1.6e-13  Score=113.14  Aligned_cols=264  Identities=15%  Similarity=0.127  Sum_probs=181.6

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC---CCc-EEEEecCCCcEEEEeCC-CccEEeecc------cC
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN---NNE-LVASGDNNSNIKLWSSS-LEHLHTFTG------HK  231 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~-~l~~~~~dg~v~vw~~~-~~~~~~~~~------~~  231 (454)
                      .|.+.+|++...+....-..   .......+..+.|..   +|. .++-+...|.|.++... ......+.+      ..
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~---q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~  121 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTL---QCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISV  121 (339)
T ss_pred             ccceEEEeecccccCcccee---eeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhh
Confidence            47888998887655441111   112334567777753   444 56666778999999872 222222222      11


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee--EEEeeccCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--VETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      ....++.|++.+..++++..+|.+.+-+......  ++.++.|.-++....|+.. .+++++|+.|+.+..||++.+...
T Consensus       122 ~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~  201 (339)
T KOG0280|consen  122 VEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF  201 (339)
T ss_pred             eeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce
Confidence            1345778899899999999999999766555543  3477899999999999754 478999999999999999954433


Q ss_pred             ---EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEEEEEEecCC--CEEE
Q psy17902        309 ---VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS--DLVA  380 (454)
Q Consensus       309 ---~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~  380 (454)
                         ....|..+|.++..++  +.++++|+.|-.|++||.+ .++++..-+..          +.|+.+.++|.-  .+|+
T Consensus       202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~----------GGVWRi~~~p~~~~~lL~  271 (339)
T KOG0280|consen  202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVG----------GGVWRIKHHPEIFHRLLA  271 (339)
T ss_pred             eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccc----------cceEEEEecchhhhHHHH
Confidence               2456777777777654  4689999999999999998 46777766543          339999999943  3566


Q ss_pred             EecCCCcEEEEEcCCCcee-----eEeccCCCceeeeEEEEcCCCCEEEEEecCCCcee-eeeeeCCC
Q psy17902        381 SGSYDGCVKLWKITPKRTL-----EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFG-RWKTIKGV  442 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~-~W~~~~~~  442 (454)
                      ++-.+| .+|-+++.+..-     ....  .|.+-+..-.|.....+|++++..|..++ +|-..++.
T Consensus       272 ~CMh~G-~ki~~~~~~~~e~~~~~~s~~--~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~  336 (339)
T KOG0280|consen  272 ACMHNG-AKILDSSDKVLEFQIVLPSDK--IHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGE  336 (339)
T ss_pred             HHHhcC-ceEEEecccccchheeeeccc--cccceeeccccccccceeeeeeccccceeeeeeeccCC
Confidence            666666 888887765221     1222  25555666667555567888878899866 88776654

>KOG2394|consensus

Probab=99.64  E-value=5e-15  Score=131.40  Aligned_cols=143  Identities=17%  Similarity=0.204  Sum_probs=111.8

Q ss_pred             CCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceec--ccC--------------------CcccCCCCCCceEEEE
Q psy17902        141 HRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVC--SSP--------------------FVKTDRKSYPPILALA  197 (454)
Q Consensus       141 h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~--~~~--------------------~~~~~~~~~~~v~~~~  197 (454)
                      .+..|+|+.|-|.+ ..++++-.+|.+++||........  ...                    ......-....|..++
T Consensus       218 ~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~  297 (636)
T KOG2394|consen  218 NKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFA  297 (636)
T ss_pred             cccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccccee
Confidence            34779999999853 466667788999999763211000  000                    0000011234788999


Q ss_pred             EeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce
Q psy17902        198 VANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI  276 (454)
Q Consensus       198 ~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v  276 (454)
                      |+|||++||+.+.||.++|||. ....+..++..-+...|++|+|||++|++|+.|--|.||.+..++.+..-.+|.+.|
T Consensus       298 FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWV  377 (636)
T KOG2394|consen  298 FSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWV  377 (636)
T ss_pred             EcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccce
Confidence            9999999999999999999999 444555666677889999999999999999999999999999999999889999999


Q ss_pred             eEEEeec
Q psy17902        277 TSLDILA  283 (454)
Q Consensus       277 ~~~~~~~  283 (454)
                      ..++|.|
T Consensus       378 s~VaFDp  384 (636)
T KOG2394|consen  378 SVVAFDP  384 (636)
T ss_pred             eeEeecc
Confidence            9999987

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=6.4e-14  Score=131.65  Aligned_cols=202  Identities=13%  Similarity=0.056  Sum_probs=133.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecCCCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDNNSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~v~v  216 (454)
                      +...+.+.+|+|||+.|+..+.+   ..|.+||+.++.......       ....+.+.+|+|||+.|+. .+.+|...|
T Consensus       194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~-------~~g~~~~~~~SPDG~~la~~~~~~g~~~I  266 (427)
T PRK02889        194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVAN-------FKGSNSAPAWSPDGRTLAVALSRDGNSQI  266 (427)
T ss_pred             CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeec-------CCCCccceEECCCCCEEEEEEccCCCceE
Confidence            77889999999999999887643   469999998876543221       2234568899999988764 567777666


Q ss_pred             EeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEe--CCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        217 WSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWN--IEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       217 w~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      |.+  .+.....+..+........|+|||+.|+..+. +|...+|.  +.++... .+..+........|+|+|++|+..
T Consensus       267 y~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~  345 (427)
T PRK02889        267 YTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVTFTGSYNTSPRISPDGKLLAYI  345 (427)
T ss_pred             EEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEecCCCCcCceEECCCCCEEEEE
Confidence            654  55556666666666778899999998886654 45555654  4444432 222223334568899999998877


Q ss_pred             eCCC---cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCC-C--EEEEecCCCccceee
Q psy17902        292 GTDK---SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDG-T--LSLWSILKKVPTHTI  351 (454)
Q Consensus       292 ~~dg---~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg-~--i~iwd~~~~~~~~~~  351 (454)
                      +.++   .|.+||+.++....+..........+.+++..|+.++.++ .  +.+.++ .+.....+
T Consensus       346 s~~~g~~~I~v~d~~~g~~~~lt~~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l  410 (427)
T PRK02889        346 SRVGGAFKLYVQDLATGQVTALTDTTRDESPSFAPNGRYILYATQQGGRSVLAAVSS-DGRIKQRL  410 (427)
T ss_pred             EccCCcEEEEEEECCCCCeEEccCCCCccCceECCCCCEEEEEEecCCCEEEEEEEC-CCCceEEe
Confidence            6554   6999999887765443332223345566777777666433 3  444455 34333333

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.63  E-value=2.4e-13  Score=128.40  Aligned_cols=214  Identities=8%  Similarity=0.019  Sum_probs=147.4

Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      ..|.++|..+.....+..|...+.+.+|+|||+.|+..+.   +..|++||+.++... .+..+.+.+.+..|+|+|+.|
T Consensus       182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~l  260 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKV  260 (435)
T ss_pred             eEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEE
Confidence            4788899888877888888889999999999998888764   468999999888653 444566677889999999876


Q ss_pred             E-EeeCCCc--EEEeeccCCeEEEEccccCCeE-EEEecCCCEEEEEeC-CC--CEEEEecCCCccceeeecccCCCCCC
Q psy17902        289 S-SGGTDKS--VRVWKIQEESQLVFNGHSRGID-MTRRVNDQQFITCGE-DG--TLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       289 ~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      + +.+.++.  |++||+.++....+..+..... ..+.+++..++..+. +|  .|++||+..+.. ..+...       
T Consensus       261 a~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~-------  332 (435)
T PRK05137        261 VMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFG-------  332 (435)
T ss_pred             EEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecC-------
Confidence            5 5555554  7788988877665555544333 445556777776663 33  577888765543 233211       


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC-----ce
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH-----RF  433 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~-----~i  433 (454)
                        ...+....|+|+|+.|+..+.+   ..|.+|++..+. ...+..   ...+..+.|+|||++|+..+...+     .|
T Consensus       333 --~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~---~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L  406 (435)
T PRK05137        333 --GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTS---GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKL  406 (435)
T ss_pred             --CCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccC---CCCCCCCeECCCCCEEEEEEccCCCCCcceE
Confidence              1225668899999988876543   358888876543 333432   234678899999999987744333     35


Q ss_pred             eeeeeeC
Q psy17902        434 GRWKTIK  440 (454)
Q Consensus       434 ~~W~~~~  440 (454)
                      .+.+...
T Consensus       407 ~~~dl~g  413 (435)
T PRK05137        407 YTVDLTG  413 (435)
T ss_pred             EEEECCC
Confidence            5555433

>KOG2041|consensus

Probab=99.63  E-value=6.5e-14  Score=128.58  Aligned_cols=283  Identities=11%  Similarity=0.133  Sum_probs=200.2

Q ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee---------cccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        140 PHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV---------CSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       140 ~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      |.+....|+.|+....++|+|+.||.+++..+.+...-         ..+....+..+|...|..+.|+.+.+.|-+...
T Consensus        12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt   91 (1189)
T KOG2041|consen   12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT   91 (1189)
T ss_pred             CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence            46677899999999999999999999999987653321         122223344689999999999999999999999


Q ss_pred             CCcEEEEeC-CCccEEe--ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE-EeeccCCceeEEEeecCCC
Q psy17902        211 NSNIKLWSS-SLEHLHT--FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE-TLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~  286 (454)
                      +|.|.||-+ .+.-...  -....+.|.+++|+.+|..++....||.|.+=.+...+... .++  ......+.|++|..
T Consensus        92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLk--g~~l~hv~ws~D~~  169 (1189)
T KOG2041|consen   92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELK--GQLLAHVLWSEDLE  169 (1189)
T ss_pred             CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcc--hheccceeecccHH
Confidence            999999998 4433322  23355678999999999999999999999888776443221 122  22345788999998


Q ss_pred             EEEEeeCCCcEEEeeccCCeE--------E----EEccccCCeEEEEec---------CCCEEEEEeCCCCEEEEecCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQ--------L----VFNGHSRGIDMTRRV---------NDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~--------~----~~~~~~~~i~~~~~~---------~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                      .++.+-.+|.+.+||....-.        +    .+...+..+..+.|.         +...|+++-.+|.+.|..-.+.
T Consensus       170 ~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND  249 (1189)
T KOG2041|consen  170 QALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEND  249 (1189)
T ss_pred             HHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCC
Confidence            888888999999999764321        1    111112223333332         3357888889998888654443


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---------CcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---------GCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      .....+...          -.+..+.|+++|.+||+++.+         +.|.+|.. -|..+.+++.  ....|++++|
T Consensus       250 ~~Pvv~dtg----------m~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkv--pg~~It~lsW  316 (1189)
T KOG2041|consen  250 PEPVVVDTG----------MKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKV--PGSCITGLSW  316 (1189)
T ss_pred             CCCeEEecc----------cEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEec--CCceeeeeEE
Confidence            332223221          228899999999999999865         25666654 3677777776  6678999999


Q ss_pred             cCCCCEEEEEecCCCceeeeeee
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      -..|-.++.+  -|+.|++=+..
T Consensus       317 Eg~gLriA~A--vdsfiyfanIR  337 (1189)
T KOG2041|consen  317 EGTGLRIAIA--VDSFIYFANIR  337 (1189)
T ss_pred             cCCceEEEEE--ecceEEEEeec
Confidence            9888777776  46666554433

>KOG1409|consensus

Probab=99.63  E-value=4.2e-14  Score=118.92  Aligned_cols=206  Identities=20%  Similarity=0.379  Sum_probs=159.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE-cCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWL-LETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ..+.+.|  |.+.|+....-|-..-+++.+.|.+++||- .+.++.-..+..     ....+++++.+.+....|++|-.
T Consensus        16 ll~~~eG--~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~-----~mP~~~~~~~y~~e~~~L~vg~~   88 (404)
T KOG1409|consen   16 LLSKIEG--SQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYH-----YMPSPCSAMEYVSESRRLYVGQD   88 (404)
T ss_pred             hhhhhcC--chhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhh-----hCCCCceEeeeeccceEEEEEEe
Confidence            5677888  999999999989888899999999999994 344443333321     24458899999999999999999


Q ss_pred             CCcEEEEeC-----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC-------------------------
Q psy17902        211 NSNIKLWSS-----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI-------------------------  260 (454)
Q Consensus       211 dg~v~vw~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~-------------------------  260 (454)
                      +|++.-+.+     ....++....|...+..+-|+-....+++.+.|..+.---.                         
T Consensus        89 ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~  168 (404)
T KOG1409|consen   89 NGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYA  168 (404)
T ss_pred             cceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEE
Confidence            999998887     23445566778899998888877777777776654431111                         


Q ss_pred             ----------------CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEe
Q psy17902        261 ----------------EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRR  322 (454)
Q Consensus       261 ----------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~  322 (454)
                                      ..-..+.++.+|.+.+++++|.+...+|++|..|..+.+||+-..+-.  ...+|...+..+..
T Consensus       169 fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~  248 (404)
T KOG1409|consen  169 FVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSY  248 (404)
T ss_pred             EecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhh
Confidence                            112345667789999999999999999999999999999999765444  77788888776665


Q ss_pred             cC-CCEEEEEeCCCCEEEEecCC
Q psy17902        323 VN-DQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       323 ~~-~~~l~~~~~dg~i~iwd~~~  344 (454)
                      .+ -..+++++.||.|.+|++..
T Consensus       249 ~~~t~~l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  249 AQHTRQLISCGEDGGIVVWNMNV  271 (404)
T ss_pred             hhhheeeeeccCCCeEEEEeccc
Confidence            43 56789999999999999854

>KOG2139|consensus

Probab=99.62  E-value=3.1e-14  Score=120.53  Aligned_cols=192  Identities=13%  Similarity=0.214  Sum_probs=140.1

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeE
Q psy17902        230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                      ....+..++|++.-..++++..|-.|++|+-.. ++...++ .....|+|++|-|.+ .-|++|+..| |.+|.......
T Consensus        97 s~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln  174 (445)
T KOG2139|consen   97 SEIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLN  174 (445)
T ss_pred             hhcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccc
Confidence            345678899999777788999999999999876 4444443 345779999999976 6677777655 88998653211


Q ss_pred             ---------------EEEccccCCeEEEEec-CCCEEEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        308 ---------------LVFNGHSRGIDMTRRV-NDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       308 ---------------~~~~~~~~~i~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                                     ....+| ..|+.+.+. ++..+++++ .+..|.|||..++..+.......         +.++-+
T Consensus       175 ~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~gl---------gg~slL  244 (445)
T KOG2139|consen  175 ANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGL---------GGFSLL  244 (445)
T ss_pred             cccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCC---------CceeeE
Confidence                           133344 456666666 456777777 67889999999887766553322         228899


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      .|||+|.+|++++.|+..++|+.... ...+...   ..+.|...+|+|+|++|+.+++..-.|+-.
T Consensus       245 kwSPdgd~lfaAt~davfrlw~e~q~wt~erw~l---gsgrvqtacWspcGsfLLf~~sgsp~lysl  308 (445)
T KOG2139|consen  245 KWSPDGDVLFAATCDAVFRLWQENQSWTKERWIL---GSGRVQTACWSPCGSFLLFACSGSPRLYSL  308 (445)
T ss_pred             EEcCCCCEEEEecccceeeeehhcccceecceec---cCCceeeeeecCCCCEEEEEEcCCceEEEE
Confidence            99999999999999999999976544 2333333   456899999999999998886666665543

>KOG1354|consensus

Probab=99.61  E-value=5.8e-14  Score=118.08  Aligned_cols=255  Identities=18%  Similarity=0.263  Sum_probs=172.8

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCC--Cc----cEEeecccC------------CCeEEEEEcCCC--CEEEE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSS--LE----HLHTFTGHK------------APITGLAISFEC--DTLYS  248 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--~~----~~~~~~~~~------------~~v~~~~~~~~~--~~l~~  248 (454)
                      ...-|.++.|...|.+||+|..+|.|.++.-+  .+    ....++.|.            ..|..+.|.+++  ..++.
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl  103 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL  103 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence            34468999999999999999999999999762  11    223344443            357889998865  46777


Q ss_pred             EeCCCcEEEEeCCCce-----------------------------------eEEEe-eccCCceeEEEeecCCCEEEEee
Q psy17902        249 SSNDRSIKVWNIEDRA-----------------------------------YVETL-FGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       249 ~~~dg~i~iwd~~~~~-----------------------------------~~~~~-~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      .+.|.+|++|-+....                                   +.+.+ .+|..-|++|+++.|+..++++ 
T Consensus       104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA-  182 (433)
T KOG1354|consen  104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA-  182 (433)
T ss_pred             ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence            8899999999875311                                   01111 2578889999999999888875 


Q ss_pred             CCCcEEEeeccCCeEE----EEc-----cccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccce------eeeccc
Q psy17902        293 TDKSVRVWKIQEESQL----VFN-----GHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTH------TIPVAH  355 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~----~~~-----~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~------~~~~~~  355 (454)
                      .|-.|.+|++.-....    -..     .....|+...|++  .+.|+-.++.|+|++-|++.....-      ..+...
T Consensus       183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp  262 (433)
T KOG1354|consen  183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP  262 (433)
T ss_pred             cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence            6778999998743221    111     1223456666664  5788889999999999998532211      111000


Q ss_pred             -CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-CceeeEeccCC----------Ccee---eeEEEEcCCC
Q psy17902        356 -GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQDIP----------LSGV---INSLVFTSDH  420 (454)
Q Consensus       356 -~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~----------~~~~---v~~l~~s~d~  420 (454)
                       .......-...|..+.|+++|+||++-+.- +|++||++. .+++.+++.+.          ....   -..++|+-++
T Consensus       263 ~~rsffseiIsSISDvKFs~sGryilsRDyl-tvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~  341 (433)
T KOG1354|consen  263 SSRSFFSEIISSISDVKFSHSGRYILSRDYL-TVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND  341 (433)
T ss_pred             cchhhHHHHhhhhhceEEccCCcEEEEeccc-eeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence             000001112348899999999999988765 799999954 35665554321          1122   3457999999


Q ss_pred             CEEEEEecCCCceeeeeeeCCCeeEE
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKGVKNTV  446 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~~~~~~  446 (454)
                      .++++| +..+.+++++...+.+..+
T Consensus       342 ~~v~TG-sy~n~frvf~~~~gsk~d~  366 (433)
T KOG1354|consen  342 SYVMTG-SYNNVFRVFNLARGSKEDF  366 (433)
T ss_pred             ceEecc-cccceEEEecCCCCcceee
Confidence            999999 8999999999766665443

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.60  E-value=1.2e-12  Score=119.25  Aligned_cols=272  Identities=10%  Similarity=0.019  Sum_probs=167.5

Q ss_pred             CEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        155 KHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       155 ~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      ++++ +-..+|.|.+.|..+.+.+..+..      ....-..+.|+|||+++++++.||.|.++|+ +.+.+.++.... 
T Consensus         6 ~l~~V~~~~~~~v~viD~~t~~~~~~i~~------~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-   78 (369)
T PF02239_consen    6 NLFYVVERGSGSVAVIDGATNKVVARIPT------GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-   78 (369)
T ss_dssp             GEEEEEEGGGTEEEEEETTT-SEEEEEE-------STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-
T ss_pred             cEEEEEecCCCEEEEEECCCCeEEEEEcC------CCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-
Confidence            4554 455679999999999888887763      2223445789999999999999999999999 777777776544 


Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeecc-------CCceeEEEeecCCCEEE-EeeCCCcEEEeecc
Q psy17902        233 PITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGH-------QSAITSLDILAKNRVIS-SGGTDKSVRVWKIQ  303 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~  303 (454)
                      ...+++++++|++++++. ..+.+.++|..+.+.+..+...       ...+.+|..+|....++ +.-..+.|.+.|..
T Consensus        79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~  158 (369)
T PF02239_consen   79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS  158 (369)
T ss_dssp             EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred             CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence            467899999999998775 5899999999999988877532       34577888888887444 44445788888877


Q ss_pred             CCeEE--EEccccC-CeEEEEecCCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE-------E
Q psy17902        304 EESQL--VFNGHSR-GIDMTRRVNDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA-------C  372 (454)
Q Consensus       304 ~~~~~--~~~~~~~-~i~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-------~  372 (454)
                      ....+  ....... .-...+.+++.+|+++ .....|-++|..+++.+..+......     |+..+..+-       |
T Consensus       159 d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p-----~~~~~~~~php~~g~vw  233 (369)
T PF02239_consen  159 DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKP-----HPGPGANFPHPGFGPVW  233 (369)
T ss_dssp             TSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSB-----EETTEEEEEETTTEEEE
T ss_pred             cccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccc-----cccccccccCCCcceEE
Confidence            65433  2222222 2334445566777665 46778999999988777665543221     222222221       2


Q ss_pred             e--cCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE---ecCCCceeeeeeeCC
Q psy17902        373 L--HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG---IGTEHRFGRWKTIKG  441 (454)
Q Consensus       373 s--~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~---~~~d~~i~~W~~~~~  441 (454)
                      .  ..+...++.-....+.+|+..+.+.+..+..  ..++ .-+..+|++++|.+.   ......|.++|..+.
T Consensus       234 ~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~--~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl  304 (369)
T PF02239_consen  234 ATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPT--QGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTL  304 (369)
T ss_dssp             EEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE---SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGT
T ss_pred             eeccccceecccccCCccccchhhcCeEEEEEEC--CCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCc
Confidence            1  1222222222233567788888888888885  3344 678889999999988   455678888887654

...

>KOG0974|consensus

Probab=99.60  E-value=7.2e-13  Score=126.93  Aligned_cols=199  Identities=23%  Similarity=0.304  Sum_probs=152.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -.+.|....+.-....++.++.+..+.+||.........+....  ........-+-++++.-++++|+.-+.|.+|+..
T Consensus        86 ~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~e--r~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~  163 (967)
T KOG0974|consen   86 FSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDE--RCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPH  163 (967)
T ss_pred             ccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCc--eEEEEeEEEEeccCcEEEEEeccccccEEEEecc
Confidence            44556666666677889999999999999998877665544210  0111122233456777899999999999999993


Q ss_pred             -CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE-EeeccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        221 -LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE-TLFGHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       221 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                       ......+.+|.+.|.++.|+.+|.++++.|.|.++++|++.+.+... ...+|+..|..++|+|+  .+++++.|.+.+
T Consensus       164 ~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcr  241 (967)
T KOG0974|consen  164 EDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCR  241 (967)
T ss_pred             ccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEE
Confidence             22233688999999999999999999999999999999999988776 66789999999999987  899999999999


Q ss_pred             EeeccCCeEEEEccccCC-eEEEEec-CCCEEEEEeCCCCEEEEecC
Q psy17902        299 VWKIQEESQLVFNGHSRG-IDMTRRV-NDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       299 i~d~~~~~~~~~~~~~~~-i~~~~~~-~~~~l~~~~~dg~i~iwd~~  343 (454)
                      +|+........+..|... +..+..+ ..-..+|++.||.+++|++.
T Consensus       242 vW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~  288 (967)
T KOG0974|consen  242 VWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN  288 (967)
T ss_pred             EEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence            997766555567666643 4444444 44567788899999999873

>KOG1354|consensus

Probab=99.59  E-value=8.8e-14  Score=117.01  Aligned_cols=254  Identities=17%  Similarity=0.260  Sum_probs=167.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC------------CCceEEEEEeCCCc--EEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS------------YPPILALAVANNNE--LVA  206 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~--~l~  206 (454)
                      ..+-|.++.|...|.+||||..+|.|.++.-..... ..+.+......|            ...|..+.|.++++  .++
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~-~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL  102 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYK-GEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL  102 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccc-cceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence            445689999999999999999999999996443221 111111111112            23688899988654  456


Q ss_pred             EecCCCcEEEEeCCCc---c------------------E---------------Ee-ecccCCCeEEEEEcCCCCEEEEE
Q psy17902        207 SGDNNSNIKLWSSSLE---H------------------L---------------HT-FTGHKAPITGLAISFECDTLYSS  249 (454)
Q Consensus       207 ~~~~dg~v~vw~~~~~---~------------------~---------------~~-~~~~~~~v~~~~~~~~~~~l~~~  249 (454)
                      ..+.|.+|++|.+..+   .                  +               +. -..|+..|++|.++.|...++++
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA  182 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA  182 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence            6677899999987211   0                  0               00 13588889999999999988887


Q ss_pred             eCCCcEEEEeCCCcee---EEEeecc-----CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-----EE-----
Q psy17902        250 SNDRSIKVWNIEDRAY---VETLFGH-----QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-----VF-----  310 (454)
Q Consensus       250 ~~dg~i~iwd~~~~~~---~~~~~~~-----~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-----~~-----  310 (454)
                      . |=.|.+|++.--..   +.-++.+     ..-|++..|+|.. ++++-.+..|+|++-|++....-     .+     
T Consensus       183 D-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped  261 (433)
T KOG1354|consen  183 D-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED  261 (433)
T ss_pred             c-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence            4 67799999864322   2222332     3458899999975 77888889999999999853221     11     


Q ss_pred             -------ccccCCeEEEEecCCCEEEEEeCCCCEEEEec-CCCccceeeecccCCCCC------CCCCCcEEEEEEecCC
Q psy17902        311 -------NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI-LKKVPTHTIPVAHGYDSS------SSEPNWITSVACLHNS  376 (454)
Q Consensus       311 -------~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~~  376 (454)
                             ..-...|..+.|+..+.++..-.--+|++||+ ...+++.+++.+......      ......-..++|+-++
T Consensus       262 p~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~  341 (433)
T KOG1354|consen  262 PSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND  341 (433)
T ss_pred             CcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence                   11223445566665544444444578999999 556777777754321100      0001113457888888


Q ss_pred             CEEEEecCCCcEEEEEcCCC
Q psy17902        377 DLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~  396 (454)
                      .+++||+....+++|++..|
T Consensus       342 ~~v~TGsy~n~frvf~~~~g  361 (433)
T KOG1354|consen  342 SYVMTGSYNNVFRVFNLARG  361 (433)
T ss_pred             ceEecccccceEEEecCCCC
Confidence            89999999999999996554

>KOG3881|consensus

Probab=99.59  E-value=2e-13  Score=116.88  Aligned_cols=220  Identities=13%  Similarity=0.183  Sum_probs=161.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCC--CcEEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNN--SNIKLW  217 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d--g~v~vw  217 (454)
                      .+++|..++...  ..|++|..+|.+.+|....+..........   ....++..+.-++... ++++|+..  ..+.||
T Consensus       104 ~~~~I~gl~~~d--g~Litc~~sG~l~~~~~k~~d~hss~l~~l---a~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiw  178 (412)
T KOG3881|consen  104 GTKSIKGLKLAD--GTLITCVSSGNLQVRHDKSGDLHSSKLIKL---ATGPGLYDVRQTDTDPYIVATGGKENINELKIW  178 (412)
T ss_pred             ccccccchhhcC--CEEEEEecCCcEEEEeccCCccccccceee---ecCCceeeeccCCCCCceEecCchhcccceeee
Confidence            556666666543  478888999999999988544221111000   1224566666666444 56668887  789999


Q ss_pred             eC-CCccEEeeccc---------CCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecC
Q psy17902        218 SS-SLEHLHTFTGH---------KAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       218 ~~-~~~~~~~~~~~---------~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      |+ ..+++..-+.-         .-.++++.|.+.  ...|++++.-+.|++||.+.+ +++..+.--..+|+++...|.
T Consensus       179 dle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~  258 (412)
T KOG3881|consen  179 DLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPS  258 (412)
T ss_pred             ecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCC
Confidence            99 33333332211         123568889887  789999999999999999865 456777767889999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCC-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      +++|++|..-|.+..||++.+...  .+.+..+.+..+..++. .++++++-|..|||+|+.+.+.++.......     
T Consensus       259 gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~-----  333 (412)
T KOG3881|consen  259 GNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSR-----  333 (412)
T ss_pred             CcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhcc-----
Confidence            999999999999999999999888  47888888887776655 7899999999999999999777776554322     


Q ss_pred             CCCCcEEEEEEecC
Q psy17902        362 SEPNWITSVACLHN  375 (454)
Q Consensus       362 ~~~~~i~~~~~s~~  375 (454)
                           ++++.+.++
T Consensus       334 -----lt~il~~~~  342 (412)
T KOG3881|consen  334 -----LTFILLRDD  342 (412)
T ss_pred             -----ccEEEecCC
Confidence                 666666554

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.59  E-value=3.1e-11  Score=103.18  Aligned_cols=276  Identities=9%  Similarity=0.118  Sum_probs=184.3

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCC--ccEEee---cccCCCe
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSL--EHLHTF---TGHKAPI  234 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~--~~~~~~---~~~~~~v  234 (454)
                      +.-|++|++.+..........   -.....++-|+|+|+++.|.++..+   |.|..|.++.  ..+..+   .....+.
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~---v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p   91 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQL---VAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPP   91 (346)
T ss_pred             CCceEEEEEeCcccccchhhh---ccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCC
Confidence            467999998854322221111   1355678899999999999888654   7788887732  233222   2223344


Q ss_pred             EEEEEcCCCCEEEEEeC-CCcEEEEeCCC-ceeEE--EeeccCCc----------eeEEEeecCCCEEEEeeC-CCcEEE
Q psy17902        235 TGLAISFECDTLYSSSN-DRSIKVWNIED-RAYVE--TLFGHQSA----------ITSLDILAKNRVISSGGT-DKSVRV  299 (454)
Q Consensus       235 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~-~~~~~--~~~~~~~~----------v~~~~~~~~~~~l~~~~~-dg~i~i  299 (454)
                      +.+++++++++|+++.. .|.|.++-++. |....  .+..|.+.          +.+..+.|++++|++... -..|.+
T Consensus        92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~  171 (346)
T COG2706          92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFL  171 (346)
T ss_pred             eEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEE
Confidence            88999999999998864 57899998865 43221  12235544          788999999999987653 236999


Q ss_pred             eeccCCeEE-----EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        300 WKIQEESQL-----VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       300 ~d~~~~~~~-----~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      |++..+...     .+....++-..++.+++.+..+.+ -+++|.+|..... ..+..++........-....+...|..
T Consensus       172 y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi  251 (346)
T COG2706         172 YDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI  251 (346)
T ss_pred             EEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence            999876654     233333444555566666655544 6899999998774 334444433333323345667889999


Q ss_pred             ecCCCEEEEecC-CCcEEEEEcCCC-ceeeEeccCC-CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        373 LHNSDLVASGSY-DGCVKLWKITPK-RTLEFLQDIP-LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       373 s~~~~~l~~~~~-dg~v~iwd~~~~-~~~~~~~~~~-~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +|+|++|.++.. ...|.+|.+... ..+..+...+ +........|+|+|++|+++.-++..|.++...+.
T Consensus       252 s~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~  323 (346)
T COG2706         252 SPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE  323 (346)
T ss_pred             CCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence            999999988754 347899988654 3344443333 33447899999999999999777788888877553

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.58  E-value=1.7e-11  Score=108.99  Aligned_cols=261  Identities=11%  Similarity=0.042  Sum_probs=166.5

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----------CCcEEEEeC-CCccEEeeccc--
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----------NSNIKLWSS-SLEHLHTFTGH--  230 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~v~vw~~-~~~~~~~~~~~--  230 (454)
                      +.|.+.|..+.+.+..+..     +....  .+ ++|+++.|+++..          +..|.+||. +.+.+..+..-  
T Consensus        27 ~~v~ViD~~~~~v~g~i~~-----G~~P~--~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~   98 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDG-----GFLPN--PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEG   98 (352)
T ss_pred             ceEEEEECCCCEEEEEEEc-----cCCCc--ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCC
Confidence            8999999999988877764     22222  24 9999998887765          689999999 67777666532  


Q ss_pred             -----CCCeEEEEEcCCCCEEEEEe-C-CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        231 -----KAPITGLAISFECDTLYSSS-N-DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       231 -----~~~v~~~~~~~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                           ......++++|+|++|++.. . +..|.+.|+.+++.+..+.-. ....-...+++..+  +-+.||......+.
T Consensus        99 p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp-~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d  175 (352)
T TIGR02658        99 PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP-DCYHIFPTANDTFF--MHCRDGSLAKVGYG  175 (352)
T ss_pred             chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC-CCcEEEEecCCccE--EEeecCceEEEEec
Confidence                 22334789999999999876 3 689999999999988877542 22222222222222  22345555443333


Q ss_pred             CCeEE------EEccccCCe--EEEEec-CCCEEEEEeCCCCEEEEecCCCccc-----eeeecccCCCCCCCCCCcEEE
Q psy17902        304 EESQL------VFNGHSRGI--DMTRRV-NDQQFITCGEDGTLSLWSILKKVPT-----HTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       304 ~~~~~------~~~~~~~~i--~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      .....      .+......+  .-..++ ++.++++... |.|.+.|+......     ..+.....  .....+..+.-
T Consensus       176 ~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~--~~~wrP~g~q~  252 (352)
T TIGR02658       176 TKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEK--ADGWRPGGWQQ  252 (352)
T ss_pred             CCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeecccccc--ccccCCCccee
Confidence            21111      111100000  002234 4555555444 99999996543322     22211110  00123444556


Q ss_pred             EEEecCCCEEEEec----------CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCCceeeeee
Q psy17902        370 VACLHNSDLVASGS----------YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       370 ~~~s~~~~~l~~~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~~i~~W~~  438 (454)
                      ++++|+++.+++..          ..+.|.++|..+++.+..+.   ....+..++|+||++ +|+++.+.++.|.+.|.
T Consensus       253 ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~---vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~  329 (352)
T TIGR02658       253 VAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE---LGHEIDSINVSQDAKPLLYALSTGDKTLYIFDA  329 (352)
T ss_pred             EEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe---CCCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence            99999999777742          22579999999999888887   456789999999999 88888667888999997


Q ss_pred             eCC
Q psy17902        439 IKG  441 (454)
Q Consensus       439 ~~~  441 (454)
                      .++
T Consensus       330 ~t~  332 (352)
T TIGR02658       330 ETG  332 (352)
T ss_pred             cCC
Confidence            665

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1064|consensus

Probab=99.58  E-value=2e-14  Score=144.00  Aligned_cols=198  Identities=15%  Similarity=0.289  Sum_probs=165.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |-..|.+|.-+|...+.+||+.||.|++|....+..+..+..     .....|+.+.|+.+|+.+..+..||.+.+|.+.
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt-----~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~ 2281 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRT-----AGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS 2281 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeec-----cCcchhhhhhhcccCCceeeeccCCceeecccC
Confidence            445678888889999999999999999999888877765543     334789999999999999999999999999999


Q ss_pred             CccEEeecccCCCeEEEEEcCCCCEEEEEe---CCCcEEEEeCCCc---eeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902        221 LEHLHTFTGHKAPITGLAISFECDTLYSSS---NDRSIKVWNIEDR---AYVETLFGHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       221 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                      .++....+.|......+.|-.  ..+++++   .++.+.+||..-.   .++.  ..|.+.++++++.|...+|++|+.+
T Consensus      2282 pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2282 PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred             CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEecCCc
Confidence            888889999999999999975  5677765   4789999996422   2333  6799999999999999999999999


Q ss_pred             CcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        295 KSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       295 g~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      |.|++||++..+.. .+..         .....+|++|+..|.|+||++.....+++++..+.
T Consensus      2358 G~v~l~D~rqrql~h~~~~---------~~~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e~a 2411 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA---------LDTREYFVTGSSEGNIKIWRLSEFGLLHTFPSEHA 2411 (2439)
T ss_pred             CcEEEeehHHHHHHHHhhh---------hhhhheeeccCcccceEEEEccccchhhcCchhhc
Confidence            99999999987665 2222         22567899999999999999999888888876663

>KOG1334|consensus

Probab=99.58  E-value=5.6e-14  Score=123.43  Aligned_cols=250  Identities=17%  Similarity=0.225  Sum_probs=180.6

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee-cccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCc
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF-TGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~-~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~  263 (454)
                      .|.+.|..+.|+..|..|++|+.|..|.+||+ .......+ .+|...|....|-|.  ...+++++.||.|++=.+...
T Consensus       140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t  219 (559)
T KOG1334|consen  140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILET  219 (559)
T ss_pred             CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccc
Confidence            68899999999999999999999999999999 55555554 579999998889884  468999999999998876443


Q ss_pred             ee---EEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE---EEcc-ccC---CeEEEEec--CCCEEEE
Q psy17902        264 AY---VETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL---VFNG-HSR---GIDMTRRV--NDQQFIT  330 (454)
Q Consensus       264 ~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~---~~~~-~~~---~i~~~~~~--~~~~l~~  330 (454)
                      ..   ...+..|.++|.-++.-|+. .-|.+++.|+.+.-+|++.....   .... +..   ....+...  +.+.|++
T Consensus       220 ~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~faV  299 (559)
T KOG1334|consen  220 GYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEFAV  299 (559)
T ss_pred             cceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcccccc
Confidence            32   23456799999999999886 56889999999999999876554   2122 222   22333333  3458999


Q ss_pred             EeCCCCEEEEecCCCcc------ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc-------
Q psy17902        331 CGEDGTLSLWSILKKVP------THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR-------  397 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-------  397 (454)
                      ++.|..+++||.+.-..      +..+...+-..   ..+..|++++|+.++.-|.+.-.|-.|++|.-..+.       
T Consensus       300 gG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~---d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~  376 (559)
T KOG1334|consen  300 GGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVE---DDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPS  376 (559)
T ss_pred             CChhhhhhhhcccchhhccccchhhhcCCccccc---cCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCC
Confidence            99999999999865322      23332222211   234459999999877766667777789999543321       


Q ss_pred             -----eee-EeccCCCceeeeEEEE-cCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        398 -----TLE-FLQDIPLSGVINSLVF-TSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       398 -----~~~-~~~~~~~~~~v~~l~~-s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                           .+. .++++.....|..+-| -|...|+++| ++-|.|.+|+...+
T Consensus       377 s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSG-SDCGhIFiW~K~t~  426 (559)
T KOG1334|consen  377 SPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSG-SDCGHIFIWDKKTG  426 (559)
T ss_pred             cchhhccchhhcccccccccceeeeccCccceEEec-CccceEEEEecchh
Confidence                 111 1444444455777765 5777888888 89999999997654

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.57  E-value=5.5e-13  Score=110.29  Aligned_cols=156  Identities=12%  Similarity=0.186  Sum_probs=114.5

Q ss_pred             eEEEEEeCCCcEEEEecC----------CCcEEEEeC--CCccEEeecc-cCCCeEEEEEcCCCCEEEEE--eCCCcEEE
Q psy17902        193 ILALAVANNNELVASGDN----------NSNIKLWSS--SLEHLHTFTG-HKAPITGLAISFECDTLYSS--SNDRSIKV  257 (454)
Q Consensus       193 v~~~~~~~~~~~l~~~~~----------dg~v~vw~~--~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~--~~dg~i~i  257 (454)
                      -..+.|+++|.+|++-..          -|...+|.+  ....+..+.- ..++|.+++|+|+++.|++.  ..++.|.+
T Consensus         8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~l   87 (194)
T PF08662_consen    8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTL   87 (194)
T ss_pred             eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEE
Confidence            346789999987765433          133455554  4444554443 34579999999999987654  45779999


Q ss_pred             EeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC---CcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC-
Q psy17902        258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD---KSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE-  333 (454)
Q Consensus       258 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~-  333 (454)
                      ||++ ++.+..+  +...++.|.|+|+|++|++++.+   |.|.+||+++.+.+....|.....+.+.|++.+|++++. 
T Consensus        88 yd~~-~~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~~t~~~WsPdGr~~~ta~t~  164 (194)
T PF08662_consen   88 YDVK-GKKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSDATDVEWSPDGRYLATATTS  164 (194)
T ss_pred             EcCc-ccEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCcEEEEEEcCCCCEEEEEEec
Confidence            9997 6666665  35678899999999999998754   669999999888887667777677777788899988774 


Q ss_pred             -----CCCEEEEecCCCccceeee
Q psy17902        334 -----DGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       334 -----dg~i~iwd~~~~~~~~~~~  352 (454)
                           |..++||+.. |+.+....
T Consensus       165 ~r~~~dng~~Iw~~~-G~~l~~~~  187 (194)
T PF08662_consen  165 PRLRVDNGFKIWSFQ-GRLLYKKP  187 (194)
T ss_pred             cceeccccEEEEEec-CeEeEecc
Confidence                 7888999984 55555443

>KOG2315|consensus

Probab=99.57  E-value=2.9e-12  Score=114.89  Aligned_cols=270  Identities=10%  Similarity=0.120  Sum_probs=170.9

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-----cC-----CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-----DN-----NS  212 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~-----dg  212 (454)
                      .++...+++++|+++|.+. +..+.|++..+...+.+..       .. .++++.|+|-+.+|.+=     ..     .-
T Consensus        35 ~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~-------~~-~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~p  105 (566)
T KOG2315|consen   35 RPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVE-------LK-KTYDLLFSPKGNYLLTWEPWAIYGPKNASNP  105 (566)
T ss_pred             CcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEec-------cc-eeeeeeecccccccccccccccccCCCCCCC
Confidence            3467888999998888765 5789999988875443332       12 78999999999988762     11     24


Q ss_pred             cEEEEeCCCccE-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC--CEEE
Q psy17902        213 NIKLWSSSLEHL-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN--RVIS  289 (454)
Q Consensus       213 ~v~vw~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~  289 (454)
                      .+.+|++..... ..+......-++..|+.|..+.+- -..+.+++|++.+.+.+.. .-|...|+.+.++|.+  ..++
T Consensus       106 n~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~~-kl~~~~i~~f~lSpgp~~~~vA  183 (566)
T KOG2315|consen  106 NVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQH-KLSVSGITMLSLSPGPEPPFVA  183 (566)
T ss_pred             ceeeeeeccceehhheehhhhcCcccccccchhhhhh-hhcceEEEEecCCccceee-eeeccceeeEEecCCCCCceEE
Confidence            578999844332 222222222268888887654332 2346789998876443322 2255667777777652  2333


Q ss_pred             E-----eeCCCcEEEeecc---------------------------------------------------------CCeE
Q psy17902        290 S-----GGTDKSVRVWKIQ---------------------------------------------------------EESQ  307 (454)
Q Consensus       290 ~-----~~~dg~i~i~d~~---------------------------------------------------------~~~~  307 (454)
                      +     .+.-+.|+||.+.                                                         ....
T Consensus       184 vyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~  263 (566)
T KOG2315|consen  184 VYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESV  263 (566)
T ss_pred             EEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceE
Confidence            2     2334456666543                                                         1111


Q ss_pred             EEEccccCCeEEEEecCCC-EEE--EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        308 LVFNGHSRGIDMTRRVNDQ-QFI--TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~~-~l~--~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      ..-....++|.++.|.+.. .|+  .|-.-..+.|||++ +.++..+.           .++-+++-|+|.|++|+.++.
T Consensus       264 ~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~-----------egpRN~~~fnp~g~ii~lAGF  331 (566)
T KOG2315|consen  264 SVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP-----------EGPRNTAFFNPHGNIILLAGF  331 (566)
T ss_pred             EEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC-----------CCCccceEECCCCCEEEEeec
Confidence            1111224556666665433 333  23355677777764 34444443           233678999999998888775


Q ss_pred             ---CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC-----CCceeeeeee
Q psy17902        385 ---DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT-----EHRFGRWKTI  439 (454)
Q Consensus       385 ---dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~-----d~~i~~W~~~  439 (454)
                         -|.|.|||+.+.+.+..+..    ..-+-+.|+|||+++++++..     |+.+.||++.
T Consensus       332 GNL~G~mEvwDv~n~K~i~~~~a----~~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  332 GNLPGDMEVWDVPNRKLIAKFKA----ANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT  390 (566)
T ss_pred             CCCCCceEEEeccchhhcccccc----CCceEEEEcCCCcEEEEEeccccEEecCCeEEEEec
Confidence               47899999999888777764    234567999999999998665     8888999874

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.56  E-value=3e-12  Score=121.13  Aligned_cols=231  Identities=11%  Similarity=0.026  Sum_probs=146.1

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEc
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAIS  240 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~  240 (454)
                      ..|.++|........ +.      .+...+...+|+|+|++|+.+...   ..|++|++.......+..+.+.+.+++|+
T Consensus       170 ~~l~~~d~~g~~~~~-l~------~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~s  242 (417)
T TIGR02800       170 YELQVADYDGANPQT-IT------RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFS  242 (417)
T ss_pred             ceEEEEcCCCCCCEE-ee------cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEEC
Confidence            367778776433222 21      244468889999999999887653   47999999555445555566677789999


Q ss_pred             CCCCEEEE-EeCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEcccc
Q psy17902        241 FECDTLYS-SSNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHS  314 (454)
Q Consensus       241 ~~~~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~  314 (454)
                      |+++.|+. .+.++  .|++||+.++... .+..+........|+|+++.|+.++. .+  .|+++++.++....+..+.
T Consensus       243 pDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~  321 (417)
T TIGR02800       243 PDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRG  321 (417)
T ss_pred             CCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCC
Confidence            99987764 44444  5999999877543 34445555567889999988776554 33  5888888877655444333


Q ss_pred             CCe-EEEEecCCCEEEEEeCCC---CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC---c
Q psy17902        315 RGI-DMTRRVNDQQFITCGEDG---TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG---C  387 (454)
Q Consensus       315 ~~i-~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~  387 (454)
                      ... ...+.+++.+++.++.++   .|.+||+.++.. ..+.. ..         ......|+|+|++|+..+.++   .
T Consensus       322 ~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~-~~---------~~~~p~~spdg~~l~~~~~~~~~~~  390 (417)
T TIGR02800       322 GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTD-TG---------LDESPSFAPNGRMILYATTRGGRGV  390 (417)
T ss_pred             CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccC-CC---------CCCCceECCCCCEEEEEEeCCCcEE
Confidence            333 334455677888777665   788888876432 22211 10         133467999999887776654   3


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      +.+.+.. +.....+..  ..+.+..++|
T Consensus       391 l~~~~~~-g~~~~~~~~--~~g~~~~~~w  416 (417)
T TIGR02800       391 LGLVSTD-GRFRARLPL--GNGDVREPAW  416 (417)
T ss_pred             EEEEECC-CceeeECCC--CCCCcCCCCC
Confidence            5555543 444444433  2344555555

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.55  E-value=5e-12  Score=119.71  Aligned_cols=233  Identities=12%  Similarity=0.051  Sum_probs=146.7

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEcC
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      .|.++|.+...... +.      .+...+....|+|+|+.|+..+.+   ..|.+|++.+.....+....+.+....|+|
T Consensus       180 ~l~~~d~~g~~~~~-l~------~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~Sp  252 (430)
T PRK00178        180 TLQRSDYDGARAVT-LL------QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSP  252 (430)
T ss_pred             EEEEECCCCCCceE-Ee------cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECC
Confidence            47777776544322 21      245578899999999998876543   368899996555555554555566789999


Q ss_pred             CCCEEEE-EeCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEccccC
Q psy17902        242 ECDTLYS-SSNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHSR  315 (454)
Q Consensus       242 ~~~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~  315 (454)
                      +|+.|+. .+.+|  .|++||+.++... .+..+........|+|+++.|+..+. +|  .|+++++.++....+.....
T Consensus       253 DG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~  331 (430)
T PRK00178        253 DGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGN  331 (430)
T ss_pred             CCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC
Confidence            9998874 44454  6888899887644 44455556677899999987765543 33  57777887766543322111


Q ss_pred             -CeEEEEecCCCEEEEEeC-CC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-C--cE
Q psy17902        316 -GIDMTRRVNDQQFITCGE-DG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-G--CV  388 (454)
Q Consensus       316 -~i~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~v  388 (454)
                       .....+.++++.++..+. ++  .|.+||+.++... .+... ..         .....|+|+|++|+..+.+ |  .|
T Consensus       332 ~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~~-~~---------~~~p~~spdg~~i~~~~~~~g~~~l  400 (430)
T PRK00178        332 YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTDT-SL---------DESPSVAPNGTMLIYATRQQGRGVL  400 (430)
T ss_pred             CccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE-EccCC-CC---------CCCceECCCCCEEEEEEecCCceEE
Confidence             223345567777776654 33  4788898776532 22111 00         2245799999987766543 3  46


Q ss_pred             EEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        389 KLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      .++++.. .....+..  ..+.+...+|+|-
T Consensus       401 ~~~~~~g-~~~~~l~~--~~g~~~~p~ws~~  428 (430)
T PRK00178        401 MLVSING-RVRLPLPT--AQGEVREPSWSPY  428 (430)
T ss_pred             EEEECCC-CceEECcC--CCCCcCCCccCCC
Confidence            6777643 33334443  4456777788873

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.54  E-value=2.8e-12  Score=121.29  Aligned_cols=192  Identities=13%  Similarity=0.018  Sum_probs=134.0

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ec
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GD  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~  209 (454)
                      +.+..  +...+.+.+|+|+|++|+.++..   ..|++|++.++.......       +...+.+++|+|+|+.|+. .+
T Consensus       183 ~~l~~--~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~-------~~~~~~~~~~spDg~~l~~~~~  253 (417)
T TIGR02800       183 QTITR--SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS-------FPGMNGAPAFSPDGSKLAVSLS  253 (417)
T ss_pred             EEeec--CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec-------CCCCccceEECCCCCEEEEEEC
Confidence            34444  66778999999999999987654   489999998875433221       3335667899999987764 44


Q ss_pred             CCC--cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        210 NNS--NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND-R--SIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       210 ~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      .++  .|++|++.+.....+..+........|+|+++.|+.++.. +  .|+++|+.+++.. .+..+...+..+.|+|+
T Consensus       254 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~~spd  332 (417)
T TIGR02800       254 KDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPSWSPD  332 (417)
T ss_pred             CCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeEECCC
Confidence            444  5888898666666666666666678999999988776543 3  6888888876643 34445566778899999


Q ss_pred             CCEEEEeeCCC---cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCC
Q psy17902        285 NRVISSGGTDK---SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDG  335 (454)
Q Consensus       285 ~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg  335 (454)
                      +++|+.++.++   .|.+||+.++....+..........+.+++..|+..+.++
T Consensus       333 g~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~p~~spdg~~l~~~~~~~  386 (417)
T TIGR02800       333 GDLIAFVHREGGGFNIAVMDLDGGGERVLTDTGLDESPSFAPNGRMILYATTRG  386 (417)
T ss_pred             CCEEEEEEccCCceEEEEEeCCCCCeEEccCCCCCCCceECCCCCEEEEEEeCC
Confidence            99998887776   7899999876554443332222334556777777766543

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=6.4e-12  Score=118.53  Aligned_cols=232  Identities=12%  Similarity=0.055  Sum_probs=142.8

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEcC
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      .|.++|.+..... .+.      .....+.+..|+|||+.|+..+..   ..|.+||+.+.....+....+......|+|
T Consensus       199 ~l~i~d~dG~~~~-~l~------~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSP  271 (448)
T PRK04792        199 QLMIADYDGYNEQ-MLL------RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSP  271 (448)
T ss_pred             EEEEEeCCCCCce-Eee------cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECC
Confidence            5666777654322 111      244578889999999988876542   358888985444444433334455789999


Q ss_pred             CCCEEEE-EeCCCc--EEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEcccc-
Q psy17902        242 ECDTLYS-SSNDRS--IKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHS-  314 (454)
Q Consensus       242 ~~~~l~~-~~~dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~-  314 (454)
                      +|+.|+. .+.+|.  |++||+.+++.. .+..+.......+|+|+++.|+..+. ++  .|+++|+.+++...+.... 
T Consensus       272 DG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~  350 (448)
T PRK04792        272 DGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGE  350 (448)
T ss_pred             CCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCC
Confidence            9997765 455664  888898877643 44445556678899999987765543 33  4677777776655332111 


Q ss_pred             CCeEEEEecCCCEEEEEeC-CC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CC--cE
Q psy17902        315 RGIDMTRRVNDQQFITCGE-DG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DG--CV  388 (454)
Q Consensus       315 ~~i~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~v  388 (454)
                      ......+.+++++++..+. ++  .|.++|+.++... .+... ..         .....|+|+|+.|+..+. +|  .+
T Consensus       351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~---------d~~ps~spdG~~I~~~~~~~g~~~l  419 (448)
T PRK04792        351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RL---------DESPSVAPNGTMVIYSTTYQGKQVL  419 (448)
T ss_pred             CCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE-EccCC-CC---------CCCceECCCCCEEEEEEecCCceEE
Confidence            1223455667777766553 44  3555677666432 22111 00         123479999997766554 33  36


Q ss_pred             EEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        389 KLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      .+++. ++.....+..  ..+.+...+|+|
T Consensus       420 ~~~~~-~G~~~~~l~~--~~g~~~~p~Wsp  446 (448)
T PRK04792        420 AAVSI-DGRFKARLPA--GQGEVKSPAWSP  446 (448)
T ss_pred             EEEEC-CCCceEECcC--CCCCcCCCccCC
Confidence            77776 4555555553  445677888887

>KOG4547|consensus

Probab=99.52  E-value=5.3e-12  Score=114.02  Aligned_cols=188  Identities=11%  Similarity=0.186  Sum_probs=148.5

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE------eC--------------CCcEEEEecCC
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV------AN--------------NNELVASGDNN  211 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~------~~--------------~~~~l~~~~~d  211 (454)
                      |-..++|....||.+++|+...++....+......   .+.-++..|      +|              +...++-|...
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~   79 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQ   79 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCC
Confidence            45679999999999999999988876665433221   222333333      22              33467888889


Q ss_pred             CcEEEEeC-CCccEEeec--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        212 SNIKLWSS-SLEHLHTFT--GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      |.|.+|+. .++....+.  .|.+.|.++.++.+-..|.+++.|+.+..|+......++.+......+.+++++||+..+
T Consensus        80 g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l  159 (541)
T KOG4547|consen   80 GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKIL  159 (541)
T ss_pred             ccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEE
Confidence            99999999 555555553  699999999999999999999999999999999999999999989999999999999999


Q ss_pred             EEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC------CCEEEEEe-CCCCEEEEecCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN------DQQFITCG-EDGTLSLWSILK  344 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~------~~~l~~~~-~dg~i~iwd~~~  344 (454)
                      ++++  +.|.+||+.+.+.+ .|.+|.+++.++.|..      +.+++++. .+..|.+|-+..
T Consensus       160 ~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~  221 (541)
T KOG4547|consen  160 LTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK  221 (541)
T ss_pred             Eecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence            9876  68999999999888 8999999998888763      35555443 556677776644

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.52  E-value=7.9e-12  Score=118.37  Aligned_cols=195  Identities=17%  Similarity=0.046  Sum_probs=130.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecCCC--cE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDNNS--NI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg--~v  214 (454)
                      |...+...+|+|+|+.|+..+.+   ..|.+|++.++.......       ....+....|+|+|+.|+. .+.+|  .|
T Consensus       197 ~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~-------~~g~~~~~~~SpDG~~la~~~~~~g~~~I  269 (430)
T PRK00178        197 SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN-------FEGLNGAPAWSPDGSKLAFVLSKDGNPEI  269 (430)
T ss_pred             CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC-------CCCCcCCeEECCCCCEEEEEEccCCCceE
Confidence            77789999999999999876644   468999998876543221       2223456899999998874 44444  58


Q ss_pred             EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      .+||+.+.....+..+........|+|+++.|+..+. +|  .|+++++.+++..... ..........|+|+++.|+..
T Consensus       270 y~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~~~~~~Spdg~~i~~~  348 (430)
T PRK00178        270 YVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYNARPRLSADGKTLVMV  348 (430)
T ss_pred             EEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCccceEECCCCCEEEEE
Confidence            8889866666666666666777899999998876654 33  5888888777643322 122233457899999988776


Q ss_pred             eCC-C--cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC-C--CEEEEecC
Q psy17902        292 GTD-K--SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED-G--TLSLWSIL  343 (454)
Q Consensus       292 ~~d-g--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-g--~i~iwd~~  343 (454)
                      +.. +  .|.+||+.++....+..........+.+++..++..+.+ |  .|.++++.
T Consensus       349 ~~~~~~~~l~~~dl~tg~~~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~  406 (430)
T PRK00178        349 HRQDGNFHVAAQDLQRGSVRILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN  406 (430)
T ss_pred             EccCCceEEEEEECCCCCEEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence            643 2  588899988766543332222334556677777665533 3  45666663

>KOG4190|consensus

Probab=99.52  E-value=7.4e-14  Score=124.69  Aligned_cols=294  Identities=13%  Similarity=0.191  Sum_probs=198.7

Q ss_pred             hccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcE
Q psy17902        126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNEL  204 (454)
Q Consensus       126 ~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  204 (454)
                      +.-..+....|.|  |+..|..++--.+.+-+++++.|.+|++|.+... ....+.....+...|..+|..+.|-.+.++
T Consensus       721 ln~~~irL~nf~G--H~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~  798 (1034)
T KOG4190|consen  721 LNFDHIRLCNFTG--HQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRS  798 (1034)
T ss_pred             cccceeeeecccC--cHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccce
Confidence            3334456778889  9999999988888899999999999999998642 222222233344579999999999999888


Q ss_pred             EEEecCCCcEEEEeC-CCccEEeec--ccCCCeEEEEEcC--CCCEEEEE-eCCCcEEEEeCCCceeEEEee-----ccC
Q psy17902        205 VASGDNNSNIKLWSS-SLEHLHTFT--GHKAPITGLAISF--ECDTLYSS-SNDRSIKVWNIEDRAYVETLF-----GHQ  273 (454)
Q Consensus       205 l~~~~~dg~v~vw~~-~~~~~~~~~--~~~~~v~~~~~~~--~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~-----~~~  273 (454)
                      ++++  ||.|++||. -+..+....  ...+.+..+...+  +...+++| +...+|+++|.+.......++     +..
T Consensus       799 i~Sc--D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pn  876 (1034)
T KOG4190|consen  799 IASC--DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPN  876 (1034)
T ss_pred             eeec--cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCc
Confidence            8876  689999998 555544321  1223333344333  34444444 678899999999887766554     344


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEE-EecCCCccceee
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSL-WSILKKVPTHTI  351 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i-wd~~~~~~~~~~  351 (454)
                      ..+++++..+.|+.++.+-.+|.|.+.|.++++.+ .+..-......+..+.++.++....|.++.+ |-...+......
T Consensus       877 a~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldgimh~q~  956 (1034)
T KOG4190|consen  877 ALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDGIMHLQD  956 (1034)
T ss_pred             hheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCCeeeecc
Confidence            66899999999999999999999999999999877 4444444444455666777777778888888 876655443333


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC----CceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP----KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      ......         ..  -...-|.-|+++.....+.+|--..    ...+..+......+..++++.-|-+..+++| 
T Consensus       957 kpppep---------ah--flqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaG- 1024 (1034)
T KOG4190|consen  957 KPPPEP---------AH--FLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAG- 1024 (1034)
T ss_pred             CCCCcc---------hh--hhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhcc-
Confidence            211110         00  0111344566666666677774221    1233344444467788999999988777777 


Q ss_pred             cCCCceee
Q psy17902        428 GTEHRFGR  435 (454)
Q Consensus       428 ~~d~~i~~  435 (454)
                      ...|.|.+
T Consensus      1025 ne~G~IaL 1032 (1034)
T KOG4190|consen 1025 NEHGAIAL 1032 (1034)
T ss_pred             CCCCceee
Confidence            66777654

>KOG2314|consensus

Probab=99.51  E-value=2.1e-11  Score=109.23  Aligned_cols=287  Identities=12%  Similarity=0.144  Sum_probs=182.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-----------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-----------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      |.+ |.-+.|||+.+||+|-+.           ...++|||+.+|.....++......   ..-.-+.||.|++|+|.-.
T Consensus       249 Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~---~~WP~frWS~DdKy~Arm~  324 (698)
T KOG2314|consen  249 HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPY---LKWPIFRWSHDDKYFARMT  324 (698)
T ss_pred             CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCc---cccceEEeccCCceeEEec
Confidence            443 788999999999998753           2589999999999888776542211   1223467999999999877


Q ss_pred             CCCcEEEEeCCC-ccEEeecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        210 NNSNIKLWSSSL-EHLHTFTGHKAPITGLAISFECDTLYSSSN-----DRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       210 ~dg~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      . ..|.||+... ..+-.-.-.-..|....|+|.++.||--+.     -..+.+..+.+++.+++-.-|.-.=..+.|-.
T Consensus       325 ~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk  403 (698)
T KOG2314|consen  325 G-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQK  403 (698)
T ss_pred             c-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEecc
Confidence            6 5688998733 222211223456888999999888876543     23567777777777766554443334567777


Q ss_pred             CCCEEEEe----------eCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEEEEEe---CCCCEEEEecCCC---
Q psy17902        284 KNRVISSG----------GTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQFITCG---EDGTLSLWSILKK---  345 (454)
Q Consensus       284 ~~~~l~~~----------~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~---~dg~i~iwd~~~~---  345 (454)
                      +|.+|+.-          +.-..+-|+.++.....  ...-....+...+-|.++.|++-+   ...++.+|-+.+.   
T Consensus       404 ~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~  483 (698)
T KOG2314|consen  404 SGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKK  483 (698)
T ss_pred             CCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCc
Confidence            78887642          11223556666554433  233333444555667788777655   3467888887631   


Q ss_pred             -ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe---cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        346 -VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG---SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       346 -~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~---~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                       ..+..+..           ...+.+.|+|.|++++++   |..|.+.++|+....... .....| ...+.+.|.|.|+
T Consensus       484 ~~lVk~~dk-----------~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~-~~~~eh-~~at~veWDPtGR  550 (698)
T KOG2314|consen  484 PSLVKELDK-----------KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKD-TASPEH-FAATEVEWDPTGR  550 (698)
T ss_pred             hhhhhhhcc-----------cccceEEEcCCCcEEEEEEecccccceEEEecchhhhhh-ccCccc-cccccceECCCCC
Confidence             12222222           227889999999988775   457889999987422221 222123 3467899999999


Q ss_pred             EEEEEecCCCceeeeeeeCCCeeEEEEEEeec
Q psy17902        422 HLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQL  453 (454)
Q Consensus       422 ~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~~~  453 (454)
                      |++++++      .|.  ....++..++.++.
T Consensus       551 YvvT~ss------~wr--hk~d~GYri~tfqG  574 (698)
T KOG2314|consen  551 YVVTSSS------SWR--HKVDNGYRIFTFQG  574 (698)
T ss_pred             EEEEeee------hhh--hccccceEEEEeec
Confidence            9999843      342  23445555665553

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.51  E-value=7.1e-12  Score=118.22  Aligned_cols=203  Identities=13%  Similarity=0.025  Sum_probs=129.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecCCCc--E
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDNNSN--I  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~--v  214 (454)
                      +...+.+..|+|||+.|+..+.+   ..|.+||+.++.......       ........+|+|+|+.|+. .+.+|.  |
T Consensus       216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~-------~~g~~~~~~wSPDG~~La~~~~~~g~~~I  288 (448)
T PRK04792        216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS-------FPGINGAPRFSPDGKKLALVLSKDGQPEI  288 (448)
T ss_pred             CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC-------CCCCcCCeeECCCCCEEEEEEeCCCCeEE
Confidence            55677899999999998876543   368888988765432211       1123346799999998775 455564  7


Q ss_pred             EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      .++|+.+.....+..+.......+|+|+++.|+..+. ++  .|+++|+.+++... +..........+|+|+|++|+..
T Consensus       289 y~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~  367 (448)
T PRK04792        289 YVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIMV  367 (448)
T ss_pred             EEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEEE
Confidence            7778866666666666666778899999998876654 33  57777887776433 22222233457899999888766


Q ss_pred             eC-CC--cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEe-CCCC--EEEEecCCCccceeee
Q psy17902        292 GT-DK--SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCG-EDGT--LSLWSILKKVPTHTIP  352 (454)
Q Consensus       292 ~~-dg--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~dg~--i~iwd~~~~~~~~~~~  352 (454)
                      +. ++  .|.++|+.++....+..........+.+++..++..+ .+|.  +.+++. ++.....+.
T Consensus       368 ~~~~g~~~I~~~dl~~g~~~~lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~  433 (448)
T PRK04792        368 NRTNGKFNIARQDLETGAMQVLTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARLP  433 (448)
T ss_pred             EecCCceEEEEEECCCCCeEEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEECc
Confidence            54 33  4566788777654333222222334566777766555 3343  666675 444444443

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.51  E-value=2e-10  Score=104.89  Aligned_cols=264  Identities=9%  Similarity=0.110  Sum_probs=161.3

Q ss_pred             CCeEEEEEcCCCCEEEEEeC----CCeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEE
Q psy17902        143 ASITCIAVTSDSKHVYSACK----DGIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKL  216 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~v  216 (454)
                      .....++++|++++|+++..    .|.|..|.+... ..+..+....   ........++++|++++|+++.. +|.|.+
T Consensus        37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~---~~g~~p~~i~~~~~g~~l~vany~~g~v~v  113 (345)
T PF10282_consen   37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVP---SGGSSPCHIAVDPDGRFLYVANYGGGSVSV  113 (345)
T ss_dssp             SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEE---ESSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred             CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeec---cCCCCcEEEEEecCCCEEEEEEccCCeEEE
Confidence            34577889999999999877    479999988764 2222111111   13345678999999999998875 799999


Q ss_pred             EeCC--CccEEe--ec-----------ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCce--eE--EEee-ccCCc
Q psy17902        217 WSSS--LEHLHT--FT-----------GHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRA--YV--ETLF-GHQSA  275 (454)
Q Consensus       217 w~~~--~~~~~~--~~-----------~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~--~~--~~~~-~~~~~  275 (454)
                      +++.  +.....  ..           .......++.|+|+++++++... ...|.+|++....  ..  ..+. .....
T Consensus       114 ~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~G  193 (345)
T PF10282_consen  114 FPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSG  193 (345)
T ss_dssp             EEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSS
T ss_pred             EEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCC
Confidence            9993  222221  11           12345788999999998888754 3479999987654  21  2222 34556


Q ss_pred             eeEEEeecCCCEEEEee-CCCcEEEeecc--CCeEE---EEccc-------cCCeEEEEecCCCEEEEEe-CCCCEEEEe
Q psy17902        276 ITSLDILAKNRVISSGG-TDKSVRVWKIQ--EESQL---VFNGH-------SRGIDMTRRVNDQQFITCG-EDGTLSLWS  341 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~-~dg~i~i~d~~--~~~~~---~~~~~-------~~~i~~~~~~~~~~l~~~~-~dg~i~iwd  341 (454)
                      .+.+.|+|+++++++.. .++.|.+|++.  .+...   .....       ...-.....+++++|+++. ..+.|.+|+
T Consensus       194 PRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~  273 (345)
T PF10282_consen  194 PRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFD  273 (345)
T ss_dssp             EEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEE
T ss_pred             CcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEE
Confidence            78999999998876554 57789999998  44322   11111       1222344455677666554 678899999


Q ss_pred             cCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC--CCceeeEeccCCCceeeeEEEE
Q psy17902        342 ILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT--PKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       342 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      +... ..+..+.....      .......++++|+|++|+++. .++.|.+|++.  +|.+...-... .-....||.|
T Consensus       274 ~d~~~g~l~~~~~~~~------~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~-~~~~p~ci~f  345 (345)
T PF10282_consen  274 LDPATGTLTLVQTVPT------GGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSV-PIPSPVCIVF  345 (345)
T ss_dssp             ECTTTTTEEEEEEEEE------SSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-ESSSEEEEEE
T ss_pred             EecCCCceEEEEEEeC------CCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccc-cCCCCEEEeC
Confidence            9432 22222221111      122278999999999888776 56789999874  44433322211 2233455555

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG0974|consensus

Probab=99.51  E-value=1.1e-12  Score=125.78  Aligned_cols=186  Identities=23%  Similarity=0.247  Sum_probs=142.9

Q ss_pred             CCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeE-----EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC
Q psy17902        200 NNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPIT-----GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS  274 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~-----~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  274 (454)
                      .....++.++.+..+.+||.....+..-..+.....     -+.++++.-++++|+.-+.|.+|+....+....+.+|.+
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG  176 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLKGHEG  176 (967)
T ss_pred             hhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceecccCC
Confidence            345678888888899999985544443333333221     233456677899999999999999874443345789999


Q ss_pred             ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        275 AITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       275 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .|.++.|+.+|.++++.+.|.++++|++.+.+..  ...+|+..+..+.+.+. .+++++.|.+.++|+.... .+..+.
T Consensus       177 ~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~~~~-~l~~y~  254 (967)
T KOG0974|consen  177 SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIITVGEDCTCRVWGVNGT-QLEVYD  254 (967)
T ss_pred             ceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEEeccceEEEEEecccc-eehhhh
Confidence            9999999999999999999999999999998776  56778887766666555 9999999999999965433 333333


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      .+.        ...|..++..++...++|++.||.+++|++..
T Consensus       255 ~h~--------g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  255 EHS--------GKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             hhh--------hcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            322        22399999999999999999999999999864

>KOG2321|consensus

Probab=99.50  E-value=2.4e-12  Score=115.57  Aligned_cols=233  Identities=14%  Similarity=0.165  Sum_probs=166.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~  222 (454)
                      .|.-.-++.|-..++.-..|.+|-+..--.......++         ..-..|+++.-..-|++++....|+-+++ .+.
T Consensus        96 ~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~RIP---------~~GRDm~y~~~scDly~~gsg~evYRlNLEqGr  166 (703)
T KOG2321|consen   96 VVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRTRIP---------KFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGR  166 (703)
T ss_pred             ceeEEEeccchhhheEeecCceeeehhhcCeeeeeecC---------cCCccccccCCCccEEEeecCcceEEEEccccc
Confidence            34444455554445555566666654332211111111         12234555543333444544567888888 788


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee------ccCC-----ceeEEEeecCCCEEEEe
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF------GHQS-----AITSLDILAKNRVISSG  291 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~-----~v~~~~~~~~~~~l~~~  291 (454)
                      .+..+....+.++++..++-..+|++|+.+|.|-.||.++...+.++.      .|.+     .|+++.|+.+|-.+++|
T Consensus       167 fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVG  246 (703)
T KOG2321|consen  167 FLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVG  246 (703)
T ss_pred             cccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEee
Confidence            888888888999999999999999999999999999999877665553      2333     39999999889999999


Q ss_pred             eCCCcEEEeeccCCeEEEEccccCC--eEEEEecCC--CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        292 GTDKSVRVWKIQEESQLVFNGHSRG--IDMTRRVND--QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      ..+|.|.|||+++.+++....|...  |..+.|.+.  .--+.......++|||-.++++...+.....          +
T Consensus       247 ts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~----------l  316 (703)
T KOG2321|consen  247 TSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSD----------L  316 (703)
T ss_pred             ccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCC----------c
Confidence            9999999999999999877777654  455555432  3334444567899999999999888765443          8


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      ..+++-|++.+++++-.++.+..|=+..
T Consensus       317 ND~C~~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  317 NDFCFVPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             CceeeecCCceEEEecCCCcceeEEccc
Confidence            8899999999999999998887776654

>KOG4547|consensus

Probab=99.49  E-value=4.9e-12  Score=114.23  Aligned_cols=192  Identities=14%  Similarity=0.152  Sum_probs=154.3

Q ss_pred             CCCCEEEEEeCCCcEEEEeCCCceeEEEeec---cCCceeEEEee------c--------------CCCEEEEeeCCCcE
Q psy17902        241 FECDTLYSSSNDRSIKVWNIEDRAYVETLFG---HQSAITSLDIL------A--------------KNRVISSGGTDKSV  297 (454)
Q Consensus       241 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~------~--------------~~~~l~~~~~dg~i  297 (454)
                      |...+++....||.+++|+...++....|..   -++..++..|.      |              +...++-|...|.|
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v   82 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV   82 (541)
T ss_pred             chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence            4567899999999999999998877666532   22333444442      2              33577888899999


Q ss_pred             EEeeccCCeEE---EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        298 RVWKIQEESQL---VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       298 ~i~d~~~~~~~---~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      .+|++..++..   ....|.+.+.++.+.. -..|.+++.|+.+..|+......+.........         +.+++.+
T Consensus        83 ~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~---------~~sl~is  153 (541)
T KOG4547|consen   83 LLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPL---------VSSLCIS  153 (541)
T ss_pred             EEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCc---------cceEEEc
Confidence            99999998877   3356888888888654 567889999999999999998888877654433         8999999


Q ss_pred             cCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC-----CCEEEEEecCCCceeeeeeeCCCeeE
Q psy17902        374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD-----HKHLVAGIGTEHRFGRWKTIKGVKNT  445 (454)
Q Consensus       374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d-----~~~l~~~~~~d~~i~~W~~~~~~~~~  445 (454)
                      |||..|++++  +.|++||+.+++.+..+.+  |.++|.+++|.-+     |.+++++...+..+.+|......+..
T Consensus       154 ~D~~~l~~as--~~ik~~~~~~kevv~~ftg--h~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~~~kkk  226 (541)
T KOG4547|consen  154 PDGKILLTAS--RQIKVLDIETKEVVITFTG--HGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEKEDKKK  226 (541)
T ss_pred             CCCCEEEecc--ceEEEEEccCceEEEEecC--CCcceEEEEEEEeccccccceeeeccccccceeEEEEEcccccc
Confidence            9999999998  5799999999999999998  9999999999887     88998887788888999887655443

>KOG2314|consensus

Probab=99.48  E-value=3.8e-11  Score=107.66  Aligned_cols=273  Identities=10%  Similarity=0.111  Sum_probs=178.7

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-----------CCcE
Q psy17902        146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-----------NSNI  214 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------dg~v  214 (454)
                      +-+.|||-|.||+|-..-| |.+|--.+...++.+.       |. .|.-+.|||+.+||++-+.           ...+
T Consensus       214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-------Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l  284 (698)
T KOG2314|consen  214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-------HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQL  284 (698)
T ss_pred             eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-------CC-CceeeecCCccceEEEecCCccccCcccCCCceE
Confidence            5788999999999988766 8899766665555543       33 6889999999999998653           2579


Q ss_pred             EEEeC-CCccEEeecc--cCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        215 KLWSS-SLEHLHTFTG--HKAPI-TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       215 ~vw~~-~~~~~~~~~~--~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +|||+ ++.....|..  ....+ .-+.||.|++++|.-.. ..|.||+..+..++..-.-.-..|....|+|.+++||-
T Consensus       285 ~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAY  363 (698)
T KOG2314|consen  285 IIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAY  363 (698)
T ss_pred             EEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEE
Confidence            99999 7777666654  22222 34689999999998776 45999998875544332234567899999999888875


Q ss_pred             eeC-----CCcEEEeeccCCeEEEEc--cccCCeEEEEecCCCEEEEEe----------CCCCEEEEecCCCc-cceeee
Q psy17902        291 GGT-----DKSVRVWKIQEESQLVFN--GHSRGIDMTRRVNDQQFITCG----------EDGTLSLWSILKKV-PTHTIP  352 (454)
Q Consensus       291 ~~~-----dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~-~~~~~~  352 (454)
                      -..     -..+.+..+.+.+.+...  .+...+...+-.++.+|+.--          .-..+.|+.++... ++..+.
T Consensus       364 wtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ve  443 (698)
T KOG2314|consen  364 WTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVE  443 (698)
T ss_pred             EcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeee
Confidence            332     234566666666555222  122333334444566665322          11234455554432 333333


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecC---CCcEEEEEcCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEe-
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSY---DGCVKLWKITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI-  427 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~-  427 (454)
                      .          ...|..++|-|.|+.+++-+.   ..++.+|.+.+ ......+..+ .....+.+.|+|.|+++++++ 
T Consensus       444 l----------ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~-dk~~~N~vfwsPkG~fvvva~l  512 (698)
T KOG2314|consen  444 L----------KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKEL-DKKFANTVFWSPKGRFVVVAAL  512 (698)
T ss_pred             c----------chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhh-cccccceEEEcCCCcEEEEEEe
Confidence            2          233889999999997766543   35799999883 3333333322 225578899999999998773 


Q ss_pred             -cCCCceeeeeee
Q psy17902        428 -GTEHRFGRWKTI  439 (454)
Q Consensus       428 -~~d~~i~~W~~~  439 (454)
                       |..|.+.++|..
T Consensus       513 ~s~~g~l~F~D~~  525 (698)
T KOG2314|consen  513 VSRRGDLEFYDTD  525 (698)
T ss_pred             cccccceEEEecc
Confidence             346777777654

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.44  E-value=1.5e-09  Score=93.11  Aligned_cols=266  Identities=9%  Similarity=0.107  Sum_probs=166.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC---CeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD---GIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v  214 (454)
                      +.+.++-|+|+|++++|+++-.+   |.|--|.++.  +.....-..  .  ....+.+.++++++|++|+++.. .|.|
T Consensus        38 ~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~--~--~~g~~p~yvsvd~~g~~vf~AnY~~g~v  113 (346)
T COG2706          38 ELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQ--T--LPGSPPCYVSVDEDGRFVFVANYHSGSV  113 (346)
T ss_pred             ccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeecc--c--cCCCCCeEEEECCCCCEEEEEEccCceE
Confidence            67778999999999999998655   7788887775  332211111  1  12234488999999999999876 4789


Q ss_pred             EEEeC--CCcc--EEeecccCCC----------eEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEEe---eccCCce
Q psy17902        215 KLWSS--SLEH--LHTFTGHKAP----------ITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVETL---FGHQSAI  276 (454)
Q Consensus       215 ~vw~~--~~~~--~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~---~~~~~~v  276 (454)
                      .++-+  .+..  ......|.+.          +.+..+.|++++|++.+. --.|.+|++..+.....-   .......
T Consensus       114 ~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GP  193 (346)
T COG2706         114 SVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGP  193 (346)
T ss_pred             EEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCc
Confidence            99988  2222  2223345555          888999999999998864 235999999977543211   1344566


Q ss_pred             eEEEeecCCCEEEEee-CCCcEEEeeccCC--eEEEE----------ccccCCeEEEEe-cCCCEEEEEe-CCCCEEEEe
Q psy17902        277 TSLDILAKNRVISSGG-TDKSVRVWKIQEE--SQLVF----------NGHSRGIDMTRR-VNDQQFITCG-EDGTLSLWS  341 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~--~~~~~----------~~~~~~i~~~~~-~~~~~l~~~~-~dg~i~iwd  341 (454)
                      +.|.|+|++++..+.+ .+++|.+|.....  +...+          .+.. ....+.. +++++|.++. ....|.+|.
T Consensus       194 RHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~-~~aaIhis~dGrFLYasNRg~dsI~~f~  272 (346)
T COG2706         194 RHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTN-WAAAIHISPDGRFLYASNRGHDSIAVFS  272 (346)
T ss_pred             ceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCC-ceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence            8999999999876655 5889999998873  22211          1222 2233333 4555555443 334788887


Q ss_pred             cCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-CcEEEEEcCCC-ceeeEeccCCCceeeeEEEEc
Q psy17902        342 ILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-GCVKLWKITPK-RTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       342 ~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      +....- +........      +......+.|+|.|++|+++..+ ..|.+|.+... -.+..+..........|+.|.
T Consensus       273 V~~~~g~L~~~~~~~t------eg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~  345 (346)
T COG2706         273 VDPDGGKLELVGITPT------EGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL  345 (346)
T ss_pred             EcCCCCEEEEEEEecc------CCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence            755422 222221111      22336789999999998888765 46888877543 122222221233345566654

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.43  E-value=8.2e-10  Score=113.89  Aligned_cols=251  Identities=11%  Similarity=0.122  Sum_probs=161.8

Q ss_pred             EEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCccc--------CCCCCCceEEEEEeCCCcEEEEec-CCCcEE
Q psy17902        146 TCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKT--------DRKSYPPILALAVANNNELVASGD-NNSNIK  215 (454)
Q Consensus       146 ~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~  215 (454)
                      ..+++++. ++++++-+.++.|++||.... ....+.....        ..........+++.++++.|+++. .++.|+
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir  649 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR  649 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence            46788875 566677777889999998643 3222211000        011233568899999887666654 457899


Q ss_pred             EEeCCCccEEeeccc-----------------CCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeecc-----
Q psy17902        216 LWSSSLEHLHTFTGH-----------------KAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-----  272 (454)
Q Consensus       216 vw~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-----  272 (454)
                      ++|..+..+.++.+-                 -.....++|+| ++..+++.+.++.|++||..++... .+.+.     
T Consensus       650 ~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~  728 (1057)
T PLN02919        650 EIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERN  728 (1057)
T ss_pred             EEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCcccc
Confidence            999866666555321                 11346799999 5566667677899999999876542 22111     


Q ss_pred             ----------CCceeEEEeecCCC-EEEEeeCCCcEEEeeccCCeEEEEcc-----------------------ccCCeE
Q psy17902        273 ----------QSAITSLDILAKNR-VISSGGTDKSVRVWKIQEESQLVFNG-----------------------HSRGID  318 (454)
Q Consensus       273 ----------~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-----------------------~~~~i~  318 (454)
                                -.....|+++|+++ ++++-+.++.|++||+.++......+                       ...+..
T Consensus       729 ~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~G  808 (1057)
T PLN02919        729 LNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLG  808 (1057)
T ss_pred             CCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCce
Confidence                      12346799999987 45555667899999998765331110                       011223


Q ss_pred             EEEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc-CCC---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        319 MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH-GYD---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       319 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      ....+++..+++-+.++.|++||..++.......... +..   .....-.....++++++|+++++-+.++.|++||+.
T Consensus       809 vavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~  888 (1057)
T PLN02919        809 VLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN  888 (1057)
T ss_pred             eeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence            3444567778888899999999998775543332110 000   011122347889999999999998999999999998


Q ss_pred             CCce
Q psy17902        395 PKRT  398 (454)
Q Consensus       395 ~~~~  398 (454)
                      ++..
T Consensus       889 ~~~~  892 (1057)
T PLN02919        889 KGEA  892 (1057)
T ss_pred             CCcc
Confidence            8754

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.42  E-value=2.6e-10  Score=106.85  Aligned_cols=237  Identities=10%  Similarity=-0.024  Sum_probs=139.5

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcE---EEEecCCC--cEEEEeCCCccEEeecccCCCeEEEE
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNEL---VASGDNNS--NIKLWSSSLEHLHTFTGHKAPITGLA  238 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~~~~~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~  238 (454)
                      +.|.+.|.+...... +.      .....+..-.|+|||+.   +++...+|  .|.+.++.+.....+....+.....+
T Consensus       165 ~~l~~~d~dG~~~~~-lt------~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~  237 (428)
T PRK01029        165 GELWSVDYDGQNLRP-LT------QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPT  237 (428)
T ss_pred             ceEEEEcCCCCCceE-cc------cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceE
Confidence            366777776544322 21      12334566799999974   22444444  57777775555455544555666789


Q ss_pred             EcCCCCEEEEEeC-CC----cEEEEeCCCc---eeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEe--eccC--C
Q psy17902        239 ISFECDTLYSSSN-DR----SIKVWNIEDR---AYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVW--KIQE--E  305 (454)
Q Consensus       239 ~~~~~~~l~~~~~-dg----~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~--d~~~--~  305 (454)
                      |+|||+.|+..+. +|    .+.+|++..+   ........+.......+|+|+|+.|+..+ .+|...+|  ++..  +
T Consensus       238 wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~  317 (428)
T PRK01029        238 FSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQ  317 (428)
T ss_pred             ECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccccc
Confidence            9999998887653 22    3444776642   32222222333456789999998776654 46655555  4432  2


Q ss_pred             eEEEEccccCCe-EEEEecCCCEEEEEeCC---CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        306 SQLVFNGHSRGI-DMTRRVNDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       306 ~~~~~~~~~~~i-~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                      ....+......+ ...+.++++.|+..+.+   ..|.+||+.++....... .         ...+....|+|+|+.|+.
T Consensus       318 ~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~-~---------~~~~~~p~wSpDG~~L~f  387 (428)
T PRK01029        318 SPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT-S---------PENKESPSWAIDSLHLVY  387 (428)
T ss_pred             ceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC-C---------CCCccceEECCCCCEEEE
Confidence            222333333333 34556677777766533   468999998776532221 1         112567899999997764


Q ss_pred             ecC---CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        382 GSY---DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       382 ~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      .+.   ...|.+|++..++......   ..+.+...+|+|-.
T Consensus       388 ~~~~~g~~~L~~vdl~~g~~~~Lt~---~~g~~~~p~Ws~~~  426 (428)
T PRK01029        388 SAGNSNESELYLISLITKKTRKIVI---GSGEKRFPSWGAFP  426 (428)
T ss_pred             EECCCCCceEEEEECCCCCEEEeec---CCCcccCceecCCC
Confidence            432   3568888988775443332   34556778888753

>KOG0280|consensus

Probab=99.42  E-value=5.4e-11  Score=98.45  Aligned_cols=251  Identities=16%  Similarity=0.192  Sum_probs=157.4

Q ss_pred             CCCCeEEEEEcC---CCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        141 HRASITCIAVTS---DSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~---~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      -++.++.|.|.-   +|. .|+-+...|.|.++..........+.......-......++.|++.+..++++..+|.+.+
T Consensus        68 dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~  147 (339)
T KOG0280|consen   68 DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG  147 (339)
T ss_pred             cccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE
Confidence            345577777763   445 5666777899999987654444333322211111113567889999999999999999986


Q ss_pred             EeC---CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CceeEEE-eeccCCceeEEEeecC-CCEEE
Q psy17902        217 WSS---SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIE-DRAYVET-LFGHQSAITSLDILAK-NRVIS  289 (454)
Q Consensus       217 w~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~  289 (454)
                      -+.   ..+.++..+.|.-.++...|+. +.+.+++|+.|+.+..||++ .++.+.. .+-|...|.+|.-+|. +.+|+
T Consensus       148 v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~  227 (339)
T KOG0280|consen  148 VYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIA  227 (339)
T ss_pred             EecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEE
Confidence            555   3344457889999999999975 45789999999999999998 3444433 4568899999988864 68999


Q ss_pred             EeeCCCcEEEeeccCC-eEEEEccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        290 SGGTDKSVRVWKIQEE-SQLVFNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      +|+.|-.|++||.++. +++.-....++|.-+...+.  ..+++++.-.-.+|-+...+.........    ....|..-
T Consensus       228 TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~~~~~~~e~~~~~~----s~~~hdSl  303 (339)
T KOG0280|consen  228 TGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILDSSDKVLEFQIVLP----SDKIHDSL  303 (339)
T ss_pred             EeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEEecccccchheeee----ccccccce
Confidence            9999999999999954 44433333455655554432  23444444444666666554332111100    01112222


Q ss_pred             EEEEEEecCCCEEEEec-CCCcEE-EEEcCC
Q psy17902        367 ITSVACLHNSDLVASGS-YDGCVK-LWKITP  395 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~-~dg~v~-iwd~~~  395 (454)
                      +..-.|.....+|||++ .|..++ +|-.-+
T Consensus       304 ~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t  334 (339)
T KOG0280|consen  304 CYGGDWDSKDSFLATCSFYDKKIRQLWLHIT  334 (339)
T ss_pred             eeccccccccceeeeeeccccceeeeeeecc
Confidence            44444533334677765 355544 664433

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.41  E-value=8.9e-10  Score=113.63  Aligned_cols=247  Identities=15%  Similarity=0.150  Sum_probs=159.5

Q ss_pred             EEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecc--------------cCCCeEEEEEcCCCCEEEEEeC-CCcEEE
Q psy17902        194 LALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTG--------------HKAPITGLAISFECDTLYSSSN-DRSIKV  257 (454)
Q Consensus       194 ~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~--------------~~~~v~~~~~~~~~~~l~~~~~-dg~i~i  257 (454)
                      ..+++++. +.++++-+.++.|++||..+..+..+..              +-.....++++++++.|+++.. ++.|++
T Consensus       571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~  650 (1057)
T PLN02919        571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE  650 (1057)
T ss_pred             ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence            46788874 5666776778899999997766554432              1123578999998887666654 578999


Q ss_pred             EeCCCceeEEEeecc-----------------CCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeEEEEccc------
Q psy17902        258 WNIEDRAYVETLFGH-----------------QSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFNGH------  313 (454)
Q Consensus       258 wd~~~~~~~~~~~~~-----------------~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------  313 (454)
                      +|+.++. +.++.+.                 -.....++++| ++.++++.+.++.|++||..++....+.+.      
T Consensus       651 id~~~~~-V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~  729 (1057)
T PLN02919        651 IDFVNET-VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNL  729 (1057)
T ss_pred             EecCCCE-EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccC
Confidence            9987764 3333210                 11235799999 456667777889999999987765433221      


Q ss_pred             ----------cCCeEEEEecCCC-EEEEEeCCCCEEEEecCCCccceeeecc---------cCCC-C--CCCCCCcEEEE
Q psy17902        314 ----------SRGIDMTRRVNDQ-QFITCGEDGTLSLWSILKKVPTHTIPVA---------HGYD-S--SSSEPNWITSV  370 (454)
Q Consensus       314 ----------~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------~~~~-~--~~~~~~~i~~~  370 (454)
                                ..+......++++ .+++-+.++.|++||+.++.........         .+.. .  ....-.....+
T Consensus       730 ~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gv  809 (1057)
T PLN02919        730 NGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGV  809 (1057)
T ss_pred             CCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCcee
Confidence                      1112233445556 4556667899999999876432111000         0000 0  00011124689


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-----------CCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-----------PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      +++++|+++++-+.+++|++||..++.........           ..-.....++++++|+.+++- +.+++|++|+..
T Consensus       810 avd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaD-t~Nn~Irvid~~  888 (1057)
T PLN02919        810 LCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVAD-TNNSLIRYLDLN  888 (1057)
T ss_pred             eEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEE-CCCCEEEEEECC
Confidence            99999999888899999999999876544332210           011247789999999866655 789999999987


Q ss_pred             CCC
Q psy17902        440 KGV  442 (454)
Q Consensus       440 ~~~  442 (454)
                      ++.
T Consensus       889 ~~~  891 (1057)
T PLN02919        889 KGE  891 (1057)
T ss_pred             CCc
Confidence            654

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.41  E-value=2.7e-09  Score=95.10  Aligned_cols=240  Identities=9%  Similarity=-0.001  Sum_probs=150.4

Q ss_pred             EcCCCCEEEEEeC----------CCeEEEEEcCCCceecccCCcccCC-CCCCceEEEEEeCCCcEEEEecC--CCcEEE
Q psy17902        150 VTSDSKHVYSACK----------DGIIIKWLLETRSKVCSSPFVKTDR-KSYPPILALAVANNNELVASGDN--NSNIKL  216 (454)
Q Consensus       150 ~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~v~v  216 (454)
                      +|||++.|+++..          +..|.+||..+.+....+....... ........++++|+|++|++...  +..|.+
T Consensus        53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V  132 (352)
T TIGR02658        53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV  132 (352)
T ss_pred             ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence            8999999888766          6899999999999988877532211 11223457899999999998763  689999


Q ss_pred             EeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-cee-EE---EeeccCCceeE-EEeec-CCCEE
Q psy17902        217 WSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-RAY-VE---TLFGHQSAITS-LDILA-KNRVI  288 (454)
Q Consensus       217 w~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~-~~---~~~~~~~~v~~-~~~~~-~~~~l  288 (454)
                      .|+ ..+.+..+.- .+...-...+.+..+  +-+.||......+.+ ++. ..   .+.....++.. -.|.+ ++.++
T Consensus       133 vD~~~~kvv~ei~v-p~~~~vy~t~e~~~~--~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~  209 (352)
T TIGR02658       133 VDLEGKAFVRMMDV-PDCYHIFPTANDTFF--MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLV  209 (352)
T ss_pred             EECCCCcEEEEEeC-CCCcEEEEecCCccE--EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEE
Confidence            999 5555555543 222222223222222  223345444433322 111 11   11110001000 03455 78888


Q ss_pred             EEeeCCCcEEEeeccCCeEE-----EEcc--------ccCCeEEEEe-cCCCEEEEEe----------CCCCEEEEecCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-----VFNG--------HSRGIDMTRR-VNDQQFITCG----------EDGTLSLWSILK  344 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-----~~~~--------~~~~i~~~~~-~~~~~l~~~~----------~dg~i~iwd~~~  344 (454)
                      ++... |.|.+.|+......     ....        ....+..+.+ ++++++++..          ..+.|.++|..+
T Consensus       210 ~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t  288 (352)
T TIGR02658       210 WPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKT  288 (352)
T ss_pred             EEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCC
Confidence            77665 99999996543222     1110        1222233444 4566666532          225799999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEec
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~  403 (454)
                      .+.+..+.....          +..++++|+++ +|++.. .++.|.++|..+++.+..+.
T Consensus       289 ~kvi~~i~vG~~----------~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~  339 (352)
T TIGR02658       289 GKRLRKIELGHE----------IDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN  339 (352)
T ss_pred             CeEEEEEeCCCc----------eeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence            999999886443          89999999999 777666 57889999999999888874

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>KOG1832|consensus

Probab=99.38  E-value=5.2e-13  Score=125.60  Aligned_cols=259  Identities=12%  Similarity=0.156  Sum_probs=191.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.|+.  |+..-+|++|+-+.++|++|+..|.|+++++.++.......      .|..+|+.+.-+.+|..+++.+..
T Consensus      1093 ~w~~frd--~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~n------cH~SavT~vePs~dgs~~Ltsss~ 1164 (1516)
T KOG1832|consen 1093 SWRSFRD--ETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVN------CHQSAVTLVEPSVDGSTQLTSSSS 1164 (1516)
T ss_pred             cchhhhc--cccceeeEEeecCCceEEeeeccceEEEEEccCcccccccc------ccccccccccccCCcceeeeeccc
Confidence            5567778  99999999999999999999999999999999998887777      699999999999999887776554


Q ss_pred             C--cEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee----ccCCceeEEEeec
Q psy17902        212 S--NIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF----GHQSAITSLDILA  283 (454)
Q Consensus       212 g--~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~  283 (454)
                      .  ...+|++  .+...++|..    -.++.|+.....-+.|+.-....+||+.++..+.++.    +.+..-++..|+|
T Consensus      1165 S~PlsaLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP 1240 (1516)
T KOG1832|consen 1165 SSPLSALWDASSTGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP 1240 (1516)
T ss_pred             cCchHHHhccccccCccccccc----cceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC
Confidence            3  4679998  5566666653    3467888765555666666778999999998776632    1222337788999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      ...+++   .||  .+||++....+ .|......+...+.|++..++..+.     |||+++.+.++.++...       
T Consensus      1241 ~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP~Ld------- 1303 (1516)
T KOG1832|consen 1241 CDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVPSLD------- 1303 (1516)
T ss_pred             CcceEe---eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhHHHHHHhcCcccc-------
Confidence            998887   466  47999987655 4444444455566777888887664     89999999998887544       


Q ss_pred             CCCcEEEEEEecCCCEEEEecC------C-----------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEE
Q psy17902        363 EPNWITSVACLHNSDLVASGSY------D-----------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVA  425 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~------d-----------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~  425 (454)
                          -..+.|+..|++++..-.      |           ...+-|+......+.++.   ...+|..+|-+|...+|.+
T Consensus      1304 ----qc~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~---v~R~~~Dlct~~~D~~l~v 1376 (1516)
T KOG1832|consen 1304 ----QCAVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIP---VDRCLLDLCTEPTDSFLGV 1376 (1516)
T ss_pred             ----ceEEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeee---cccchhhhhcCCccceEEE
Confidence                466888888886655430      0           123444544445555554   5667888898998888877


Q ss_pred             E
Q psy17902        426 G  426 (454)
Q Consensus       426 ~  426 (454)
                      -
T Consensus      1377 I 1377 (1516)
T KOG1832|consen 1377 I 1377 (1516)
T ss_pred             E
Confidence            5

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.38  E-value=6.4e-10  Score=103.57  Aligned_cols=260  Identities=13%  Similarity=0.079  Sum_probs=166.4

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      +..+++++.+|.|..+|..+++..........      .......  ++..+++++.+|.+..+|. +++.+...... .
T Consensus        65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~------~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~  135 (377)
T TIGR03300        65 GGKVYAADADGTVVALDAETGKRLWRVDLDER------LSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-S  135 (377)
T ss_pred             CCEEEEECCCCeEEEEEccCCcEeeeecCCCC------cccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-c
Confidence            57888999999999999999988776554221      1111222  4567888888999999999 67776655432 2


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----eEEEeecCCCEEEEeeCCCcEEEeeccCCeE
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI-----TSLDILAKNRVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                      .+.+.-.. .+..++.++.+|.|+.||..+++.+..+......+     .+....  +..++.+..++.+..+|+.+++.
T Consensus       136 ~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~  212 (377)
T TIGR03300       136 EVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQP  212 (377)
T ss_pred             eeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCE
Confidence            22211111 24577788889999999999998877664322211     111122  34677788889999999998876


Q ss_pred             E-EEccc-cC---------CeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        308 L-VFNGH-SR---------GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       308 ~-~~~~~-~~---------~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      . ..... ..         .+.......++.+++++.+|.++.||..+++.+.......           .....  ..+
T Consensus       213 ~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-----------~~~p~--~~~  279 (377)
T TIGR03300       213 LWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-----------YQGPA--VDD  279 (377)
T ss_pred             eeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-----------ccCce--EeC
Confidence            5 21110 00         0111111235678888899999999999998776654211           11122  245


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ..|++++.+|.|..+|..+++.+-...... .....+...  .+..|+++ +.+|.|++|+..++.
T Consensus       280 ~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~-~~~~ssp~i--~g~~l~~~-~~~G~l~~~d~~tG~  341 (377)
T TIGR03300       280 NRLYVTDADGVVVALDRRSGSELWKNDELK-YRQLTAPAV--VGGYLVVG-DFEGYLHWLSREDGS  341 (377)
T ss_pred             CEEEEECCCCeEEEEECCCCcEEEcccccc-CCccccCEE--ECCEEEEE-eCCCEEEEEECCCCC
Confidence            678888899999999999987665442211 112222222  35677777 788999998876553

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.38  E-value=4.8e-10  Score=99.77  Aligned_cols=278  Identities=11%  Similarity=0.101  Sum_probs=182.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCC---------------eEEEEEcCCCceecccCCcccCCCCCCceE-EEEEeCCCcEEE
Q psy17902        143 ASITCIAVTSDSKHVYSACKDG---------------IIIKWLLETRSKVCSSPFVKTDRKSYPPIL-ALAVANNNELVA  206 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~  206 (454)
                      ..|..+.|+|.++||.+-+..+               .+.+||+.++..+..+......    .... -+.|+.+..++|
T Consensus        72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~----~~~Wp~~k~s~~D~y~A  147 (561)
T COG5354          72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQP----YLGWPVLKFSIDDKYVA  147 (561)
T ss_pred             CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCc----ccccceeeeeecchhhh
Confidence            3489999999999999976543               4999999999988877643211    1123 577888887766


Q ss_pred             EecCCCcEEEEeCCCcc-EEeecc-cCCCeEEEEEcCCC--CEEEE-----EeCCCcEEEEeCCCceeEEEeeccCCcee
Q psy17902        207 SGDNNSNIKLWSSSLEH-LHTFTG-HKAPITGLAISFEC--DTLYS-----SSNDRSIKVWNIEDRAYVETLFGHQSAIT  277 (454)
Q Consensus       207 ~~~~dg~v~vw~~~~~~-~~~~~~-~~~~v~~~~~~~~~--~~l~~-----~~~dg~i~iwd~~~~~~~~~~~~~~~~v~  277 (454)
                      -. ....++|++++... ..-+.. ....|....|+|.+  ..|+.     .+..+.+++|.+..+..+.+-.-....=.
T Consensus       148 Rv-v~~sl~i~e~t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~  226 (561)
T COG5354         148 RV-VGSSLYIHEITDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGV  226 (561)
T ss_pred             hh-ccCeEEEEecCCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeeccc
Confidence            55 34579999972211 111111 13568888899864  34443     35678999999987665544322223335


Q ss_pred             EEEeecCCCEEEEee-----------CCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEE--EeCCCCEEEEecC
Q psy17902        278 SLDILAKNRVISSGG-----------TDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFIT--CGEDGTLSLWSIL  343 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~-----------~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~--~~~dg~i~iwd~~  343 (454)
                      .+.|.+.|++|++--           ....++++++....+.......++|....|. .++.|++  |-....+.++|++
T Consensus       227 qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr  306 (561)
T COG5354         227 QLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR  306 (561)
T ss_pred             EEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccc
Confidence            688888888765421           1246788888855544443556777766664 4555544  4478899999998


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceee-EeccCCCceeeeEEEEcCC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLE-FLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~-~~~~~~~~~~v~~l~~s~d  419 (454)
                      .. ..+.++...           -..+.|+|.+++++.++-|   |.|.+||....-... .+.+    ...+-+.|+||
T Consensus       307 ~N-l~~~~Pe~~-----------rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~----~n~s~~~wspd  370 (561)
T COG5354         307 GN-LRFYFPEQK-----------RNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG----LNTSYCDWSPD  370 (561)
T ss_pred             cc-eEEecCCcc-----------cccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec----CCceEeeccCC
Confidence            76 444433221           4568899999999887765   679999987553322 3332    22445689999


Q ss_pred             CCEEEEEec-----CCCceeeeeeeCC
Q psy17902        420 HKHLVAGIG-----TEHRFGRWKTIKG  441 (454)
Q Consensus       420 ~~~l~~~~~-----~d~~i~~W~~~~~  441 (454)
                      ++++.+...     .|..+.+|++...
T Consensus       371 ~qF~~~~~ts~k~~~Dn~i~l~~v~g~  397 (561)
T COG5354         371 GQFYDTDTTSEKLRVDNSIKLWDVYGA  397 (561)
T ss_pred             ceEEEecCCCcccccCcceEEEEecCc
Confidence            999887743     3778889987543

>KOG1064|consensus

Probab=99.36  E-value=7.5e-12  Score=126.11  Aligned_cols=194  Identities=14%  Similarity=0.333  Sum_probs=155.7

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +-..|.++.-+|...+.++|+.||.|++|.. .+..+..+. .-+..|+.+.|+.+|+.+..+..||.+.+|.+. .+..
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~ 2285 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPY 2285 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccce
Confidence            3456788888898899999999999999999 666666554 234789999999999999999999999999988 5556


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEee---CCCcEEEeeccCCe--EEEEccccCCeEEEEecC-CCEEEEEeCCCCEEEE
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGG---TDKSVRVWKIQEES--QLVFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLW  340 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~--~~~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iw  340 (454)
                      ...+.|......+.|-.  ..+++++   .++.+.+||.....  ......|..+.+++.+.+ ...|++|+.+|.|++|
T Consensus      2286 ~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~ 2363 (2439)
T KOG1064|consen 2286 TSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLF 2363 (2439)
T ss_pred             eccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEe
Confidence            67778998888888875  5666654   46899999975433  234578888888877654 6788999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      |++..+..++++.                  ++ ...+|++|+..|.++||++.....+..+..
T Consensus      2364 D~rqrql~h~~~~------------------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~ 2408 (2439)
T KOG1064|consen 2364 DIRQRQLRHTFQA------------------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFPS 2408 (2439)
T ss_pred             ehHHHHHHHHhhh------------------hh-hhheeeccCcccceEEEEccccchhhcCch
Confidence            9999888887763                  22 455899999999999999988766666554

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=99.36  E-value=1.1e-09  Score=102.03  Aligned_cols=255  Identities=12%  Similarity=0.100  Sum_probs=161.0

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      ++..+++++.+|.+..+|..+++........       ..+.+.-.. .+..++.++.+|.|..||. +++.+..+....
T Consensus       104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-------~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~  175 (377)
T TIGR03300       104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLS-------SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVT  175 (377)
T ss_pred             cCCEEEEEcCCCEEEEEECCCCcEeeeeccC-------ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCC
Confidence            4578888899999999999999887665431       122211111 2346777778999999999 677666654332


Q ss_pred             CCeE-----EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CC---c------e-eEEEeecCCCEEEEeeCCC
Q psy17902        232 APIT-----GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QS---A------I-TSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       232 ~~v~-----~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~---~------v-~~~~~~~~~~~l~~~~~dg  295 (454)
                      ..+.     +....  +..++.++.+|.+..+|+.+++.+...... ..   .      + .+..+  .+..+++++.+|
T Consensus       176 ~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g  251 (377)
T TIGR03300       176 PALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQG  251 (377)
T ss_pred             CceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCC
Confidence            2111     11111  346788888899999999999876543211 00   0      0 11111  245777788899


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      .++.||..+++..-....... .. ....++.+++++.+|.|..+|..+++.+.........        ...+...  .
T Consensus       252 ~l~a~d~~tG~~~W~~~~~~~-~~-p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~--------~~ssp~i--~  319 (377)
T TIGR03300       252 RVAALDLRSGRVLWKRDASSY-QG-PAVDDNRLYVTDADGVVVALDRRSGSELWKNDELKYR--------QLTAPAV--V  319 (377)
T ss_pred             EEEEEECCCCcEEEeeccCCc-cC-ceEeCCEEEEECCCCeEEEEECCCCcEEEccccccCC--------ccccCEE--E
Confidence            999999999877622211111 11 1124678888889999999999998877655221110        0122222  3


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeEeccCCCceee-eEEEEcCCCCEEEEEecCCCceeee
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI-NSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      +..|++++.+|.|+++|..+++.+..+..  +...+ .+.++. ++ .|+++ +.||.|+.+
T Consensus       320 g~~l~~~~~~G~l~~~d~~tG~~~~~~~~--~~~~~~~sp~~~-~~-~l~v~-~~dG~l~~~  376 (377)
T TIGR03300       320 GGYLVVGDFEGYLHWLSREDGSFVARLKT--DGSGIASPPVVV-GD-GLLVQ-TRDGDLYAF  376 (377)
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEEEc--CCCccccCCEEE-CC-EEEEE-eCCceEEEe
Confidence            56889999999999999999988877764  23222 233333 33 46666 678888765

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.36  E-value=4.5e-09  Score=92.93  Aligned_cols=147  Identities=10%  Similarity=0.071  Sum_probs=123.4

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC-cEEEEeCCCccEEeecccC
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS-NIKLWSSSLEHLHTFTGHK  231 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~v~vw~~~~~~~~~~~~~~  231 (454)
                      +|++++..+. |...|.+...+-.+..        ++...|.-..+..+++-++.|..|| .+-|+|..+..+..+...-
T Consensus       331 ~Gd~ia~VSR-GkaFi~~~~~~~~iqv--------~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~l  401 (668)
T COG4946         331 NGDYIALVSR-GKAFIMRPWDGYSIQV--------GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDL  401 (668)
T ss_pred             CCcEEEEEec-CcEEEECCCCCeeEEc--------CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCc
Confidence            5888888876 6777766554443322        4666788888888888999999999 8999999888888888888


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC----cEEEeeccCCeE
Q psy17902        232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK----SVRVWKIQEESQ  307 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~  307 (454)
                      +.|.++..+++|+.++++.....|.+.|+.++.....-+...+-|+.+.|+|++++||-+--+|    .|+++|+.+++.
T Consensus       402 g~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Ki  481 (668)
T COG4946         402 GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKI  481 (668)
T ss_pred             cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeE
Confidence            9999999999999999999999999999999987655556678899999999999999876655    689999999887


Q ss_pred             E
Q psy17902        308 L  308 (454)
Q Consensus       308 ~  308 (454)
                      .
T Consensus       482 y  482 (668)
T COG4946         482 Y  482 (668)
T ss_pred             E
Confidence            6

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.36  E-value=1.4e-09  Score=110.11  Aligned_cols=269  Identities=10%  Similarity=0.106  Sum_probs=169.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCC----------------------c--------------c
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPF----------------------V--------------K  184 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------------------~--------------~  184 (454)
                      -...|.|++||||+..|+..+.+|++.+.+-. ...+...++                      .              .
T Consensus       119 vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~  197 (928)
T PF04762_consen  119 VDSGILAASWSPDEELLALVTGEGNLLLMTRD-FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPT  197 (928)
T ss_pred             EcCcEEEEEECCCcCEEEEEeCCCEEEEEecc-ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCC
Confidence            44579999999999999999999988877421 111100000                      0              0


Q ss_pred             ---cCCC---CCCceEEEEEeCCCcEEEEecC---C---CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-
Q psy17902        185 ---TDRK---SYPPILALAVANNNELVASGDN---N---SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-  251 (454)
Q Consensus       185 ---~~~~---~~~~v~~~~~~~~~~~l~~~~~---d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  251 (454)
                         ...+   ....-..|+|-.||.|+|+.+.   .   ..++||+-++....+...-.+--.+++|.|.|++|++.-. 
T Consensus       198 ~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~  277 (928)
T PF04762_consen  198 VPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSWRPSGNLIASSQRL  277 (928)
T ss_pred             CCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccCCCCCCEEEEEEEc
Confidence               0000   2234567899999999998875   2   4789999877655555444444567899999999998764 


Q ss_pred             --CCcEEEEeCCC---ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEE
Q psy17902        252 --DRSIKVWNIED---RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTR  321 (454)
Q Consensus       252 --dg~i~iwd~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~  321 (454)
                        ...|.+|.-+.   ++....+......|..+.|++++..|+....|. |.+|-..+-.-.     .+... ..+..+.
T Consensus       278 ~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~-~~~~~~~  355 (928)
T PF04762_consen  278 PDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSS-ESVNFVK  355 (928)
T ss_pred             CCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCC-CCCCceE
Confidence              34577776442   222222224567899999999999999877655 999988775432     22222 2233355


Q ss_pred             ecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-----CCCEEEEecCCCcEEEEEcC
Q psy17902        322 RVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-----NSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       322 ~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~dg~v~iwd~~  394 (454)
                      |.+  ...|...+.+|.+..+++                        ...+..++     |...+++... .++.+-.+.
T Consensus       356 Wdpe~p~~L~v~t~~g~~~~~~~------------------------~~~v~~s~~~~~~D~g~vaVIDG-~~lllTpf~  410 (928)
T PF04762_consen  356 WDPEKPLRLHVLTSNGQYEIYDF------------------------AWDVSRSPGSSPNDNGTVAVIDG-NKLLLTPFR  410 (928)
T ss_pred             ECCCCCCEEEEEecCCcEEEEEE------------------------EEEEEecCCCCccCceEEEEEeC-CeEEEeccc
Confidence            554  456777777788877765                        22222222     1113333332 357776666


Q ss_pred             CCceeeE--eccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        395 PKRTLEF--LQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       395 ~~~~~~~--~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .......  ........+|.+++|++++..+++- ..||.|.+|..
T Consensus       411 ~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl-~~d~~l~~~~~  455 (928)
T PF04762_consen  411 RAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVL-TSDGSLSIYEW  455 (928)
T ss_pred             ccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEE-ECCCCEEEEEe
Confidence            5422111  1222356789999999999877766 67898888874

>KOG2041|consensus

Probab=99.35  E-value=2.1e-11  Score=112.51  Aligned_cols=232  Identities=13%  Similarity=0.107  Sum_probs=165.8

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc----------------cEEeecccCCCeEEEEEcCCCCEEEEEeCC
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLE----------------HLHTFTGHKAPITGLAISFECDTLYSSSND  252 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  252 (454)
                      ......|++|+....++|+|+.||.++|..+...                .-+++.+|...|..+.|+.+.+.|-+...+
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~   92 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS   92 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence            4457889999999999999999999999987211                124567999999999999999999999999


Q ss_pred             CcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEE
Q psy17902        253 RSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQF  328 (454)
Q Consensus       253 g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l  328 (454)
                      |.|.+|-+-.+.....+.  ...+.|.+++|+.+|..|+....||.|.|=.+..+...  .+.+.. ...+.+..+...+
T Consensus        93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~-l~hv~ws~D~~~~  171 (1189)
T KOG2041|consen   93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQL-LAHVLWSEDLEQA  171 (1189)
T ss_pred             ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchhe-ccceeecccHHHH
Confidence            999999998876554432  34577999999999999999999999998888766554  111111 1134445555667


Q ss_pred             EEEeCCCCEEEEecCCCccc-----eeeecccCCCCCCCCCCcEEEEEEe--------cCCCEEEEecCCCcEEEEEcCC
Q psy17902        329 ITCGEDGTLSLWSILKKVPT-----HTIPVAHGYDSSSSEPNWITSVACL--------HNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       329 ~~~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~s--------~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      +.+-.+|.+.+||....-..     ..+....   ..+..+..|..+.|.        |+...|+++-.+|.+.|..-.+
T Consensus       172 Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg---~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eN  248 (1189)
T KOG2041|consen  172 LFKKANGETHLYDNQGNFERKLEKDCEVNGTG---IFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEN  248 (1189)
T ss_pred             HhhhcCCcEEEecccccHHHhhhhceEEeeee---eecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcC
Confidence            77778899999997543211     1111111   111122235556553        4777999999999999876555


Q ss_pred             CceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        396 KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       396 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      ......+.   ..-.+..+.|+++|..|++++
T Consensus       249 D~~Pvv~d---tgm~~vgakWnh~G~vLAvcG  277 (1189)
T KOG2041|consen  249 DPEPVVVD---TGMKIVGAKWNHNGAVLAVCG  277 (1189)
T ss_pred             CCCCeEEe---cccEeecceecCCCcEEEEcc
Confidence            43333333   335688999999999999983

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=1.3e-09  Score=102.08  Aligned_cols=220  Identities=11%  Similarity=0.041  Sum_probs=133.6

Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEE---EEEeCC--CcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTL---YSSSND--RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      +.|.+.|..+.....+......+.+-.|+|||+.+   ++...+  ..|++.++.+++... +....+......|+|||+
T Consensus       165 ~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~-lt~~~g~~~~p~wSPDG~  243 (428)
T PRK01029        165 GELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKK-ILALQGNQLMPTFSPRKK  243 (428)
T ss_pred             ceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceE-eecCCCCccceEECCCCC
Confidence            46777777777666666666677788999999752   244333  368888998776433 333444556789999998


Q ss_pred             EEEEeeC-CC----cEEEeeccCC---eEEEEc-cccCC-eEEEEecCCCEEEEEe-CCCCEEEEe--cCC-Cccceeee
Q psy17902        287 VISSGGT-DK----SVRVWKIQEE---SQLVFN-GHSRG-IDMTRRVNDQQFITCG-EDGTLSLWS--ILK-KVPTHTIP  352 (454)
Q Consensus       287 ~l~~~~~-dg----~i~i~d~~~~---~~~~~~-~~~~~-i~~~~~~~~~~l~~~~-~dg~i~iwd--~~~-~~~~~~~~  352 (454)
                      .|+..+. +|    .+.+|++..+   ....+. ..... ....+.+++..|+..+ .+|...+|.  +.. +.....+.
T Consensus       244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt  323 (428)
T PRK01029        244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT  323 (428)
T ss_pred             EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec
Confidence            8776542 22    3444676642   222222 22122 2345566777777655 466555554  332 12222221


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      .         ....+....|||+|+.|+..+.+   ..|.+||+.++.... +..  ....+....|+|||++|+.....
T Consensus       324 ~---------~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~--~~~~~~~p~wSpDG~~L~f~~~~  391 (428)
T PRK01029        324 K---------KYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTT--SPENKESPSWAIDSLHLVYSAGN  391 (428)
T ss_pred             c---------CCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccC--CCCCccceEECCCCCEEEEEECC
Confidence            1         11236778999999988766543   369999998876543 332  23356779999999998866443


Q ss_pred             --CCceeeeeeeCCCee
Q psy17902        430 --EHRFGRWKTIKGVKN  444 (454)
Q Consensus       430 --d~~i~~W~~~~~~~~  444 (454)
                        ...|.+|+...+...
T Consensus       392 ~g~~~L~~vdl~~g~~~  408 (428)
T PRK01029        392 SNESELYLISLITKKTR  408 (428)
T ss_pred             CCCceEEEEECCCCCEE
Confidence              345667776555433

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.32  E-value=6.4e-11  Score=98.79  Aligned_cols=249  Identities=18%  Similarity=0.309  Sum_probs=163.7

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC------ccEEeecccC------------CCeEEEEEcCCC--CEEEE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSL------EHLHTFTGHK------------APITGLAISFEC--DTLYS  248 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~------~~~~~~~~~~------------~~v~~~~~~~~~--~~l~~  248 (454)
                      ....|+++.|...|.||++|...|.|.+|.-..      +....+++|.            ..|..+.|..++  ..++.
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl  104 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL  104 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence            345799999999999999999999999998621      2223345554            357788887654  46777


Q ss_pred             EeCCCcEEEEeCCCce-------------------------------------eE-----EEe-eccCCceeEEEeecCC
Q psy17902        249 SSNDRSIKVWNIEDRA-------------------------------------YV-----ETL-FGHQSAITSLDILAKN  285 (454)
Q Consensus       249 ~~~dg~i~iwd~~~~~-------------------------------------~~-----~~~-~~~~~~v~~~~~~~~~  285 (454)
                      .+.|.+|++|.+....                                     .+     +.+ ..|..-|++++++.+.
T Consensus       105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~  184 (460)
T COG5170         105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK  184 (460)
T ss_pred             ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence            7899999999874320                                     00     011 3577778999999888


Q ss_pred             CEEEEeeCCCcEEEeeccCCeE----EEEccc-----cCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccc------
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQ----LVFNGH-----SRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPT------  348 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~----~~~~~~-----~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~------  348 (454)
                      ..++++ .|-.|.+|++.-...    +-...|     ...|+...+++  .+.|.-.+..|.|++-|++.....      
T Consensus       185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~kl  263 (460)
T COG5170         185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKL  263 (460)
T ss_pred             heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhh
Confidence            888765 677899999874322    122222     22345555654  467788889999999999843211      


Q ss_pred             eeeec-ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC-ceeeEeccC----------CCceee---eE
Q psy17902        349 HTIPV-AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK-RTLEFLQDI----------PLSGVI---NS  413 (454)
Q Consensus       349 ~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~----------~~~~~v---~~  413 (454)
                      ..... .........-...|..+.|+++|++|++-+.- +|+|||++.. .++.++..+          .....|   ..
T Consensus       264 fe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe  342 (460)
T COG5170         264 FELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE  342 (460)
T ss_pred             hhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence            11100 00000011122348899999999999988875 7999999865 555555321          011223   34


Q ss_pred             EEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        414 LVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       414 l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +.||-|.+.+++| +..+...++-+.+
T Consensus       343 isfSgd~~~v~sg-sy~NNfgiyp~~s  368 (460)
T COG5170         343 ISFSGDDKHVLSG-SYSNNFGIYPTDS  368 (460)
T ss_pred             EEecCCccccccc-ccccceeeecccc
Confidence            7899999999988 7777777776433

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=99.32  E-value=9.9e-10  Score=97.81  Aligned_cols=273  Identities=13%  Similarity=0.137  Sum_probs=178.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--------
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--------  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------  212 (454)
                      -.-++..++|||.|.+|++.... .|.+|.......+..+.        ...|..+.|+|+++||.+=+..+        
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~--------~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~  101 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR--------HPDVKYLDFSPNEKYLVTWSREPIIEPEIEI  101 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheeeee--------cCCceecccCcccceeeeeccCCccChhhcc
Confidence            45578899999999999998775 48899877766444433        23799999999999999865433        


Q ss_pred             -------cEEEEeC-CCccEEeecccCCC--eE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeE-EEeec-cCCceeEE
Q psy17902        213 -------NIKLWSS-SLEHLHTFTGHKAP--IT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYV-ETLFG-HQSAITSL  279 (454)
Q Consensus       213 -------~v~vw~~-~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~-~~~~v~~~  279 (454)
                             .+.+||+ ++..+..+.....+  .+ -+.|+-+.++++-. ....++|+++ +.... ..+.. ....|...
T Consensus       102 sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dF  179 (561)
T COG5354         102 SPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLRPVGILDF  179 (561)
T ss_pred             CCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhccccceeeE
Confidence                   4999999 77777777765555  44 67888888777655 3456999997 33221 11111 13567888


Q ss_pred             EeecCCC--EEEE-----eeCCCcEEEeeccCCeEEEE--ccccCCeEEEEecCCCEEEEEe-----------CCCCEEE
Q psy17902        280 DILAKNR--VISS-----GGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRRVNDQQFITCG-----------EDGTLSL  339 (454)
Q Consensus       280 ~~~~~~~--~l~~-----~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~-----------~dg~i~i  339 (454)
                      .|+|.++  .|+.     .+..+.+++|.+..+..+..  .-....+..-+.+.+.+++.-.           ....++|
T Consensus       180 sisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl  259 (561)
T COG5354         180 SISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYL  259 (561)
T ss_pred             EecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEE
Confidence            8998743  3333     45678999999987666522  2223344444555555544211           1245677


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe--cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG--SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      +++......-..          ...++|..++|.|.++.+++.  -.+-.+.++|+... ....+    ..+.=+.+.||
T Consensus       260 ~~~~e~~i~V~~----------~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~----Pe~~rNT~~fs  324 (561)
T COG5354         260 LRITERSIPVEK----------DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF----PEQKRNTIFFS  324 (561)
T ss_pred             Eeecccccceec----------cccccceeeeecccCCceeEEecccccceeecccccc-eEEec----CCccccccccc
Confidence            777532211111          124459999999998866554  46788999998865 33222    33455677888


Q ss_pred             CCCCEEEEEecC---CCceeeeeeeC
Q psy17902        418 SDHKHLVAGIGT---EHRFGRWKTIK  440 (454)
Q Consensus       418 ~d~~~l~~~~~~---d~~i~~W~~~~  440 (454)
                      |.+++++.+ |-   .|.+.+|+...
T Consensus       325 p~~r~il~a-gF~nl~gni~i~~~~~  349 (561)
T COG5354         325 PHERYILFA-GFDNLQGNIEIFDPAG  349 (561)
T ss_pred             CcccEEEEe-cCCccccceEEeccCC
Confidence            888888775 33   45667776543

>KOG4532|consensus

Probab=99.31  E-value=8.5e-10  Score=90.31  Aligned_cols=236  Identities=13%  Similarity=0.054  Sum_probs=155.4

Q ss_pred             CCcEEEEecCCCcEEEEeCCCccE--EeecccCCCeEEEEE-cCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCcee
Q psy17902        201 NNELVASGDNNSNIKLWSSSLEHL--HTFTGHKAPITGLAI-SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT  277 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~~~~~~--~~~~~~~~~v~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~  277 (454)
                      ...+||.|+..|...+|.......  .....|...|+-+.= ....-.+..++.|.++++.++..+..-.......-.+.
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~n  162 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQN  162 (344)
T ss_pred             cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccccee
Confidence            345899999999999999854332  333344443332211 11223577788899999988875543322221223388


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccCCeEE--E-Ec--cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL--V-FN--GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~-~~--~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      +++++++++++++.+....|..|.+......  . +.  ....+....+...+..|++++.||++.|||++.........
T Consensus       163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~  242 (344)
T KOG4532|consen  163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI  242 (344)
T ss_pred             eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence            9999999999999999999999998764433  1 11  22233444455567889999999999999998754433222


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEeccCC-----C-ceeeeEEEEcCCCCEEE
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQDIP-----L-SGVINSLVFTSDHKHLV  424 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~-~~~v~~l~~s~d~~~l~  424 (454)
                      ..    ..+.|.+.+..+.|++.|.  +|+..-.-+.+.+.|+++++..+.+...+     | ...|...+|+.++..+.
T Consensus       243 ss----trp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~  318 (344)
T KOG4532|consen  243 SS----TRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESND  318 (344)
T ss_pred             cc----cCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccc
Confidence            11    1123778899999998765  56666667889999999986555544321     2 24488889998888877


Q ss_pred             EEecCCCceeeeeeeCCC
Q psy17902        425 AGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       425 ~~~~~d~~i~~W~~~~~~  442 (454)
                      +.  ..-.+.-|+.....
T Consensus       319 v~--~e~~~ae~ni~srs  334 (344)
T KOG4532|consen  319 VK--NELQGAEYNILSRS  334 (344)
T ss_pred             cc--cchhhheeeccccc
Confidence            76  33344556654443

>KOG4190|consensus

Probab=99.30  E-value=5.6e-12  Score=112.93  Aligned_cols=207  Identities=20%  Similarity=0.333  Sum_probs=151.3

Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-------ceeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-------RAYVETLFGHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                      -.+..+.+|+..|..++--.+.+.+++++.|.+|++|.++.       ..+..++..|..+|.++.|..+.+++++  .|
T Consensus       726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--cD  803 (1034)
T KOG4190|consen  726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--CD  803 (1034)
T ss_pred             eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--cc
Confidence            34567889999999888777888999999999999999863       3466778899999999999988888875  58


Q ss_pred             CcEEEeeccCCeEEE------EccccCCeEEEEecCCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        295 KSVRVWKIQEESQLV------FNGHSRGIDMTRRVNDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       295 g~i~i~d~~~~~~~~------~~~~~~~i~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      |.|.+||.--+..+.      ..+..+.|.++...+...++++ +...+|+++|.+...-...+......    ..+..+
T Consensus       804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~----~Pna~~  879 (1034)
T KOG4190|consen  804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP----GPNALT  879 (1034)
T ss_pred             CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCC----CCchhe
Confidence            899999987665541      1122233444444444555555 67899999999998777766654321    234558


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee-eee
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR-WKT  438 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~-W~~  438 (454)
                      .+++..+.|+.++++-.+|+|.+.|.++|+.+..+..+.  -....++ .|..+.|+.+ ..|+.+.+ |-.
T Consensus       880 R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpme--cdllqla-apsdq~L~~s-aldHslaVnWha  947 (1034)
T KOG4190|consen  880 RAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPME--CDLLQLA-APSDQALAQS-ALDHSLAVNWHA  947 (1034)
T ss_pred             eEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCccc--chhhhhc-CchhHHHHhh-cccceeEeeehh
Confidence            999999999999999999999999999998887666432  2233333 3445566655 56777766 643

>KOG3914|consensus

Probab=99.30  E-value=5.4e-11  Score=102.72  Aligned_cols=163  Identities=14%  Similarity=0.201  Sum_probs=120.6

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc----EEeecccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCce
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEH----LHTFTGHKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDRA  264 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~  264 (454)
                      .+..+..++.+++||++..+....+++.....    +.....-...-+++.|..+......+..   ...+.+|....+.
T Consensus        64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~  143 (390)
T KOG3914|consen   64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR  143 (390)
T ss_pred             cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence            34455678889999999988888787772211    2222223334455556555555555444   4455566655555


Q ss_pred             eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902        265 YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~  342 (454)
                      +. .+.+|-+.++.++|+||+.+|+++..|..|+|-.......+  ...+|..-|..+...++..|++++.|++|++||+
T Consensus       144 ~~-~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~  222 (390)
T KOG3914|consen  144 CE-PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDI  222 (390)
T ss_pred             cc-hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEec
Confidence            44 44589999999999999999999999999999888766555  5678999999898889999999999999999999


Q ss_pred             CCCccceeeeccc
Q psy17902        343 LKKVPTHTIPVAH  355 (454)
Q Consensus       343 ~~~~~~~~~~~~~  355 (454)
                      .+++.++++....
T Consensus       223 ~sgk~L~t~dl~s  235 (390)
T KOG3914|consen  223 TSGKLLDTCDLSS  235 (390)
T ss_pred             ccCCcccccchhH
Confidence            9999998876543

>KOG2315|consensus

Probab=99.29  E-value=1.5e-09  Score=97.82  Aligned_cols=247  Identities=12%  Similarity=0.125  Sum_probs=158.8

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC--cEEEE-----ecCCCcEEEEe
Q psy17902        146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN--ELVAS-----GDNNSNIKLWS  218 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~-----~~~dg~v~vw~  218 (454)
                      ++..|++|..+.|- -..+.+.+|++.+...+...       -|...|..+.++|.+  ..||+     ++.-+.|+||.
T Consensus       129 W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~~~k-------l~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~  200 (566)
T KOG2315|consen  129 WVPQFSIDESLAAR-LVSNEVQFYDLGSFKTIQHK-------LSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYK  200 (566)
T ss_pred             cccccccchhhhhh-hhcceEEEEecCCccceeee-------eeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEec
Confidence            58889888654432 33478999999874433222       256689999999873  34443     24456899998


Q ss_pred             CCCccEEeec----ccCCCeEEEEEcCCCCEEE-EEe--CC---------CcEEEEeCCCceeEEEeeccCCceeEEEee
Q psy17902        219 SSLEHLHTFT----GHKAPITGLAISFECDTLY-SSS--ND---------RSIKVWNIEDRAYVETLFGHQSAITSLDIL  282 (454)
Q Consensus       219 ~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~-~~~--~d---------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  282 (454)
                      ..........    -....=..+.|++-|+-|+ .++  -|         .++++++++...+...+ .-.++|.++.|+
T Consensus       201 ~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~  279 (566)
T KOG2315|consen  201 YPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWS  279 (566)
T ss_pred             cccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCCceEEEEC
Confidence            7422111111    1122234578888765333 222  22         46888888844444443 357999999999


Q ss_pred             cCCCEEE--EeeCCCcEEEeeccCCeEEEEccccCCeE-EEEecCCCEEEEEe---CCCCEEEEecCCCccceeeecccC
Q psy17902        283 AKNRVIS--SGGTDKSVRVWKIQEESQLVFNGHSRGID-MTRRVNDQQFITCG---EDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       283 ~~~~~l~--~~~~dg~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      |+++-++  -|..-..+.|||++..-...+  ..++-+ ..+.+.+++++.++   -.|.|-|||+.+.+.+..+.... 
T Consensus       280 ~s~~EF~VvyGfMPAkvtifnlr~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~-  356 (566)
T KOG2315|consen  280 PSGREFAVVYGFMPAKVTIFNLRGKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN-  356 (566)
T ss_pred             CCCCEEEEEEecccceEEEEcCCCCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC-
Confidence            9996554  455677899999986443322  333333 44455677777766   45899999999988888876544 


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecC------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSY------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                                .+-+.|+|||.+|+|++.      |+.++||+.. |..+..-..   ......++|-|
T Consensus       357 ----------tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f---~sEL~qv~W~P  410 (566)
T KOG2315|consen  357 ----------TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMF---KSELLQVEWRP  410 (566)
T ss_pred             ----------ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cceeehhhh---hHhHhheeeee
Confidence                      677999999999988874      6779999975 444433221   11355566654

>KOG1912|consensus

Probab=99.27  E-value=5.6e-09  Score=97.73  Aligned_cols=203  Identities=12%  Similarity=0.097  Sum_probs=133.1

Q ss_pred             EeEeccCCCCCCeEEEEEcCC------------CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC
Q psy17902        133 CTKFNGKPHRASITCIAVTSD------------SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN  200 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  200 (454)
                      ++.+..  |...|+.+.|.|-            .-+||++.-.|.|.+||......+..+.      .+..++..++|-+
T Consensus        48 iqsie~--h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~------~~~~~~qdl~W~~  119 (1062)
T KOG1912|consen   48 IQSIEL--HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLS------HSNDSVQDLCWVP  119 (1062)
T ss_pred             hhcccc--CccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhc------CCCcchhheeeee
Confidence            445556  9999999999762            1257777778999999999888777776      4778889999876


Q ss_pred             C---C-cEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCC-------ceeEE
Q psy17902        201 N---N-ELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIED-------RAYVE  267 (454)
Q Consensus       201 ~---~-~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~-------~~~~~  267 (454)
                      .   . .+|++-....++.+|+. +++.+...........|+.+.| +.+.+..-+..|.|.+-+.-.       ++..+
T Consensus       120 ~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~q  199 (1062)
T KOG1912|consen  120 ARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQ  199 (1062)
T ss_pred             ccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEE
Confidence            3   3 46777777789999988 8888888877777888899988 566777777778777776421       22222


Q ss_pred             EeeccCC----------------c---------eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEE
Q psy17902        268 TLFGHQS----------------A---------ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTR  321 (454)
Q Consensus       268 ~~~~~~~----------------~---------v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~  321 (454)
                      .-..|..                .         ...++|+|.-+.++-......+.++|+.-..++ ...-..+....+.
T Consensus       200 I~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~  279 (1062)
T KOG1912|consen  200 ITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVD  279 (1062)
T ss_pred             EecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeE
Confidence            2122221                0         112456676544444456677888888876666 2222222222222


Q ss_pred             ---ecCCCEEEEEeCCCCEEEEecC
Q psy17902        322 ---RVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       322 ---~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                         .+..+.|++...||.+.+|-.+
T Consensus       280 vlP~~~rd~LfclH~nG~ltirvrk  304 (1062)
T KOG1912|consen  280 VLPDPRRDALFCLHSNGRLTIRVRK  304 (1062)
T ss_pred             eccCCCcceEEEEecCCeEEEEEee
Confidence               2234556677777777777543

>KOG1912|consensus

Probab=99.27  E-value=5.8e-10  Score=104.10  Aligned_cols=246  Identities=11%  Similarity=0.079  Sum_probs=174.3

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-----------
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-----------  201 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------  201 (454)
                      .+++.|.+|...-.++.|+|.| +||.|+. ..|.+-|..+.+.+..+.      .|...|+.+.|.|-           
T Consensus         6 ~~tlpG~l~~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie------~h~s~V~~VrWap~~~p~~llS~~~   77 (1062)
T KOG1912|consen    6 DHTLPGPLSRSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIE------LHQSAVTSVRWAPAPSPRDLLSPSS   77 (1062)
T ss_pred             cccCCCCCCcccccccccCccc-eEEEecC-ceEEEEehhhhhhhhccc------cCccceeEEEeccCCCchhccCccc
Confidence            3556677777778899999976 6777765 578888988888888777      48889999999873           


Q ss_pred             -CcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC---CC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCc
Q psy17902        202 -NELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF---EC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA  275 (454)
Q Consensus       202 -~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  275 (454)
                       .-+||++...|.|.+||. ....+..+..|..++..++|-+   +. ..|++-....+|.+|+..+|+.+.........
T Consensus        78 ~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~i  157 (1062)
T KOG1912|consen   78 SQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEI  157 (1062)
T ss_pred             cceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcc
Confidence             125788888999999999 6667778888999999999976   33 46667677789999999999988777655566


Q ss_pred             eeEEEeecCC-CEEEEeeCCCcEEEeeccC-------CeEE-EEccccC------------Ce--------------EEE
Q psy17902        276 ITSLDILAKN-RVISSGGTDKSVRVWKIQE-------ESQL-VFNGHSR------------GI--------------DMT  320 (454)
Q Consensus       276 v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~-------~~~~-~~~~~~~------------~i--------------~~~  320 (454)
                      ..|+.+.|-. +.+..-+..|.+.+-+.-.       ++.. ....|..            .+              ...
T Consensus       158 Ls~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~fa  237 (1062)
T KOG1912|consen  158 LSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFA  237 (1062)
T ss_pred             eeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhh
Confidence            7778888854 5555556677776665432       1111 1111111            00              011


Q ss_pred             EecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC--EEEEecCCCcEEEEEcCC
Q psy17902        321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD--LVASGSYDGCVKLWKITP  395 (454)
Q Consensus       321 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~  395 (454)
                      +.+.-..++.......+.++|+.-..++..++...+.         +.-+.+-|+++  .|++...||.+.+|--..
T Consensus       238 f~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~---------akfv~vlP~~~rd~LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  238 FSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGG---------AKFVDVLPDPRRDALFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             cChhhhceEEEEeccceEEEcchhhceeEEEEeccCC---------cceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence            1122233444455677999999988888888876543         45566666554  899999999999997554

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.26  E-value=1.3e-08  Score=84.76  Aligned_cols=234  Identities=18%  Similarity=0.192  Sum_probs=138.1

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEE
Q psy17902        148 IAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLH  225 (454)
Q Consensus       148 ~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~  225 (454)
                      ++.+++|++||... |..|.|=.....  ..+.....   .......-..++||||+.+||.+...|+|++||+.+..+.
T Consensus         3 ~~~~~~Gk~lAi~q-d~~iEiRsa~Ddf~si~~kcqV---pkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf   78 (282)
T PF15492_consen    3 LALSSDGKLLAILQ-DQCIEIRSAKDDFSSIIGKCQV---PKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF   78 (282)
T ss_pred             eeecCCCcEEEEEe-ccEEEEEeccCCchheeEEEec---CCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeE
Confidence            56788998888754 567777654331  11111111   1123345678999999999999999999999999776666


Q ss_pred             eecc-------cCCCeEEEEEcCCC------CEEEEEeCCCcEEEEeCCCc-----eeEEEee---ccCCceeEEEeecC
Q psy17902        226 TFTG-------HKAPITGLAISFEC------DTLYSSSNDRSIKVWNIEDR-----AYVETLF---GHQSAITSLDILAK  284 (454)
Q Consensus       226 ~~~~-------~~~~v~~~~~~~~~------~~l~~~~~dg~i~iwd~~~~-----~~~~~~~---~~~~~v~~~~~~~~  284 (454)
                      .+..       -...|..+.|.+..      ..|++-...|.++-|-+..+     +....+.   .+...|.++.++|.
T Consensus        79 ~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~  158 (282)
T PF15492_consen   79 VIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPK  158 (282)
T ss_pred             EcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCC
Confidence            5543       23567777775431      25667777888887765322     2223332   24678999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCC---CEEEEEeCCCC------EEEEecCCCccceeeeccc
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVND---QQFITCGEDGT------LSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~---~~l~~~~~dg~------i~iwd~~~~~~~~~~~~~~  355 (454)
                      .++|++|+....      ..+   .......++++-...++   -..++...++.      ..+|.+.+...   +... 
T Consensus       159 h~LLlVgG~~~~------~~~---~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~---fs~~-  225 (282)
T PF15492_consen  159 HRLLLVGGCEQN------QDG---MSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKF---FSRQ-  225 (282)
T ss_pred             CCEEEEeccCCC------CCc---cccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceee---eecc-
Confidence            888887765332      000   00111112222111111   11112222221      12232221111   1100 


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                           ......|..|..||||.+||+...+|.|.+|++.+-+......
T Consensus       226 -----~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~  268 (282)
T PF15492_consen  226 -----GQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK  268 (282)
T ss_pred             -----ccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence                 0124459999999999999999999999999998776665554

>KOG0309|consensus

Probab=99.25  E-value=8.9e-11  Score=108.80  Aligned_cols=284  Identities=12%  Similarity=0.191  Sum_probs=182.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC--cEEEEecCCCcEEEEeC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN--ELVASGDNNSNIKLWSS  219 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~v~vw~~  219 (454)
                      .+++.++.++|.|+-+|+++.-|. .+.|+...-.......    ....-.|-.+.|++..  .+-++......-.+|++
T Consensus        24 ~~~~~a~si~p~grdi~lAsr~gl-~i~dld~p~~ppr~l~----h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnl   98 (1081)
T KOG0309|consen   24 DGGFNAVSINPSGRDIVLASRQGL-YIIDLDDPFTPPRWLH----HITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNL   98 (1081)
T ss_pred             cCcccceeeccccchhhhhhhcCe-EEEeccCCCCCceeee----ccCcchhcceecccCCCCceeEEecCcchhhhhhh
Confidence            456889999999999999988774 4556654322111110    0112245667787643  34444444556678998


Q ss_pred             ----CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCce-eEEEeeccCCceeEEEeecCCCEEEEeeC
Q psy17902        220 ----SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRA-YVETLFGHQSAITSLDILAKNRVISSGGT  293 (454)
Q Consensus       220 ----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  293 (454)
                          +...-..+.+|...|+.+.|+|.. ..+++++.|..+..||+++.. ++..+..-...-..+.|+-....+++.+.
T Consensus        99 A~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlassh  178 (1081)
T KOG0309|consen   99 AKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH  178 (1081)
T ss_pred             hcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhcc
Confidence                233345667899999999999854 678899999999999998764 44455555556678999865555555667


Q ss_pred             CCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        294 DKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       294 dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      ...|++||++.+...  ...+|...+..+.+..  ...+++++.||+|+.||..............        ..+|..
T Consensus       179 g~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt--------~~piw~  250 (1081)
T KOG0309|consen  179 GNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTT--------NFPIWR  250 (1081)
T ss_pred             CCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccc--------cCccee
Confidence            788999999987654  5666766666666553  4568899999999999986654333222221        223555


Q ss_pred             EEEecCCC--EEEEecCCCcEEE---------EEcCCC-ceeeEeccCCCceeeeEEEEcCCCC---------EEEEEec
Q psy17902        370 VACLHNSD--LVASGSYDGCVKL---------WKITPK-RTLEFLQDIPLSGVINSLVFTSDHK---------HLVAGIG  428 (454)
Q Consensus       370 ~~~s~~~~--~l~~~~~dg~v~i---------wd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~---------~l~~~~~  428 (454)
                      -.+.|-|.  ++.---.+..|.+         |+..++ +++..+.+  |...|....|-..+.         +-+++-+
T Consensus       251 ~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~G--H~D~V~eFlWR~r~e~~~d~d~rdfQLVTWS  328 (1081)
T KOG0309|consen  251 GRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVG--HDDVVLEFLWRKRKECDGDYDSRDFQLVTWS  328 (1081)
T ss_pred             ccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecC--cchHHHHHhhhhcccccCCCCccceeEEEee
Confidence            56666443  2221111223444         444333 56667766  777777776654322         3334448


Q ss_pred             CCCceeeeeeeC
Q psy17902        429 TEHRFGRWKTIK  440 (454)
Q Consensus       429 ~d~~i~~W~~~~  440 (454)
                      .|..+++|-...
T Consensus       329 kD~~lrlWpI~~  340 (1081)
T KOG0309|consen  329 KDQTLRLWPIDS  340 (1081)
T ss_pred             cCCceEeeeccH
Confidence            999999997654

>KOG3914|consensus

Probab=99.25  E-value=9.5e-11  Score=101.24  Aligned_cols=160  Identities=16%  Similarity=0.225  Sum_probs=111.9

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCC
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSL  221 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~  221 (454)
                      +..+.+++.+++||++..+....++++........+.-..   .-...-+++.|..+...+..+..-   ..+.+|....
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~---~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~  141 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS---CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS  141 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe---ecccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence            4556677888888888887777677665443311110000   011123344444444444444444   4555555543


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCceeEEEeecCCCEEEEeeCCCcEEEe
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAITSLDILAKNRVISSGGTDKSVRVW  300 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~  300 (454)
                      .....+-+|-..++.++|+||+++|+++..|..|++-.......+..+ .||..-|..++..++ ..|++++.|++|++|
T Consensus       142 ~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~W  220 (390)
T KOG3914|consen  142 GRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLW  220 (390)
T ss_pred             cCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEE
Confidence            555666789999999999999999999999999999887766555555 479999999999754 458999999999999


Q ss_pred             eccCCeEE
Q psy17902        301 KIQEESQL  308 (454)
Q Consensus       301 d~~~~~~~  308 (454)
                      |+.+++.+
T Consensus       221 d~~sgk~L  228 (390)
T KOG3914|consen  221 DITSGKLL  228 (390)
T ss_pred             ecccCCcc
Confidence            99999887

>KOG1409|consensus

Probab=99.23  E-value=1.4e-09  Score=92.24  Aligned_cols=237  Identities=14%  Similarity=0.257  Sum_probs=169.4

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C-CccEEe-ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-S-LEHLHT-FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE--  261 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~-~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--  261 (454)
                      .++...+++...-|...-+++.+.|.+++||-- + ++.-.. ......+++++.+.+....|++|-.+|++.-+.+.  
T Consensus        21 eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sed  100 (404)
T KOG1409|consen   21 EGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSED  100 (404)
T ss_pred             cCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhh
Confidence            467778888888887778999999999999965 2 222111 22345788999999999999999999999988653  


Q ss_pred             --CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCCCEEEEEeCCCC
Q psy17902        262 --DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVNDQQFITCGEDGT  336 (454)
Q Consensus       262 --~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~~~l~~~~~dg~  336 (454)
                        ....++....|...|..+.|+-...++++.+.|..+.---.+.+..+   .+........+...    +...|...|.
T Consensus       101 fnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~----~~fvGd~~gq  176 (404)
T KOG1409|consen  101 FNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL----YAFVGDHSGQ  176 (404)
T ss_pred             hhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE----EEEecccccc
Confidence              34455566689999999999988889999999987754444444443   11111111111111    4445556666


Q ss_pred             EEEEecCCC--ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee-eEeccCCCceeeeE
Q psy17902        337 LSLWSILKK--VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL-EFLQDIPLSGVINS  413 (454)
Q Consensus       337 i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~  413 (454)
                      |.+-.+...  .++.++.         +|...+.+++|.|...+|++|..|..|.+||+.-.+-. ..+.+  |...|..
T Consensus       177 vt~lr~~~~~~~~i~~~~---------~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~g--h~~kV~~  245 (404)
T KOG1409|consen  177 ITMLKLEQNGCQLITTFN---------GHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQG--HNDKVQA  245 (404)
T ss_pred             eEEEEEeecCCceEEEEc---------CcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeecc--chhhhhh
Confidence            666554332  3333333         35666999999999999999999999999999755322 23333  8888999


Q ss_pred             EEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        414 LVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       414 l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++..+--+.|+++ +.||.|.+|+..
T Consensus       246 l~~~~~t~~l~S~-~edg~i~~w~mn  270 (404)
T KOG1409|consen  246 LSYAQHTRQLISC-GEDGGIVVWNMN  270 (404)
T ss_pred             hhhhhhheeeeec-cCCCeEEEEecc
Confidence            9999888888888 899999999864

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.23  E-value=3e-08  Score=92.40  Aligned_cols=209  Identities=11%  Similarity=0.032  Sum_probs=131.6

Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCE-EEEEeC---CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDT-LYSSSN---DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      ..|.+-|.++...+.+.... .+....|+|+|+. ++..+.   +..|+++|+.+++..... ...+......|+|||+.
T Consensus       169 ~~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~~~g~~~~~~~SPDG~~  246 (419)
T PRK04043        169 SNIVLADYTLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-SSQGMLVVSDVSKDGSK  246 (419)
T ss_pred             ceEEEECCCCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-cCCCcEEeeEECCCCCE
Confidence            45666666666555554443 7788999999985 554443   356999999888654433 34555667889999976


Q ss_pred             EEE-eeCC--CcEEEeeccCCeEEEEccccC-CeEEEEecCCCEEEEEeC-CC--CEEEEecCCCccceeeecccCCCCC
Q psy17902        288 ISS-GGTD--KSVRVWKIQEESQLVFNGHSR-GIDMTRRVNDQQFITCGE-DG--TLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       288 l~~-~~~d--g~i~i~d~~~~~~~~~~~~~~-~i~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      |+. .+.+  ..|+++|+.++....+..+.. .....+.+++..++..+. .+  .|.++|+.++....... . +    
T Consensus       247 la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~-g----  320 (419)
T PRK04043        247 LLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVF-H-G----  320 (419)
T ss_pred             EEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCcc-C-C----
Confidence            654 3333  468888888876655444333 334456667777766553 33  57777887665432221 1 1    


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCC---------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYD---------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                            .....|+|+|++|+..+..         ..|.+.|+.++.. ..+..   .+......|+|||+.|+......+
T Consensus       321 ------~~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~---~~~~~~p~~SPDG~~I~f~~~~~~  390 (419)
T PRK04043        321 ------KNNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTA---NGVNQFPRFSSDGGSIMFIKYLGN  390 (419)
T ss_pred             ------CcCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCC---CCCcCCeEECCCCCEEEEEEccCC
Confidence                  0124899999987766543         2678888877753 44443   123346899999999988755544


Q ss_pred             ceeeeee
Q psy17902        432 RFGRWKT  438 (454)
Q Consensus       432 ~i~~W~~  438 (454)
                      .-.+|-.
T Consensus       391 ~~~L~~~  397 (419)
T PRK04043        391 QSALGII  397 (419)
T ss_pred             cEEEEEE
Confidence            4444443

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=99.21  E-value=1.6e-08  Score=89.51  Aligned_cols=143  Identities=10%  Similarity=0.034  Sum_probs=112.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDG-IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |.+.|.-..+..+++-++.|..|| .+-|+|..++......       ...+.|.++..+++|++++++.....+.+.|+
T Consensus       358 ~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e-------~~lg~I~av~vs~dGK~~vvaNdr~el~vidi  430 (668)
T COG4946         358 KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIE-------KDLGNIEAVKVSPDGKKVVVANDRFELWVIDI  430 (668)
T ss_pred             CCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEee-------CCccceEEEEEcCCCcEEEEEcCceEEEEEEe
Confidence            888899999998888999999999 9999999987754433       35668999999999999999998889999999


Q ss_pred             CCccEEe-ecccCCCeEEEEEcCCCCEEEEEeCCC----cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        220 SLEHLHT-FTGHKAPITGLAISFECDTLYSSSNDR----SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       220 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      ++..+.. -+...+-|+.+.|+|++..+|-+--+|    .|+++|+.+++..... .....=.+-+|.|++++|.--
T Consensus       431 dngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT-T~ta~DfsPaFD~d~ryLYfL  506 (668)
T COG4946         431 DNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT-TPTAYDFSPAFDPDGRYLYFL  506 (668)
T ss_pred             cCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec-CCcccccCcccCCCCcEEEEE
Confidence            5444444 455667899999999999999876655    6899999988765433 233333566788888877544

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.19  E-value=2.1e-07  Score=81.07  Aligned_cols=222  Identities=10%  Similarity=0.009  Sum_probs=143.1

Q ss_pred             EEEEeC-CCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEc-CCCCEEEEEeCCCcEEEEeCCCceeEEEeec-
Q psy17902        195 ALAVAN-NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAIS-FECDTLYSSSNDRSIKVWNIEDRAYVETLFG-  271 (454)
Q Consensus       195 ~~~~~~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-  271 (454)
                      +++|.+ ++.++++-...+.|..|+..+.....+....  ...+++. ++ ..|+.+...+ +.++|+.+++....... 
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g~~~~~~~~~   79 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPD-GRLYVADSGG-IAVVDPDTGKVTVLADLP   79 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTT-SEEEEEETTC-EEEEETTTTEEEEEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccC-CEEEEEEcCc-eEEEecCCCcEEEEeecc
Confidence            577887 7777777777899999999666665544333  7778887 55 5566666645 56669988865433322 


Q ss_pred             ----cCCceeEEEeecCCCEEEEeeCC--------CcEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEE-EEeCCCCE
Q psy17902        272 ----HQSAITSLDILAKNRVISSGGTD--------KSVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFI-TCGEDGTL  337 (454)
Q Consensus       272 ----~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~-~~~~dg~i  337 (454)
                          .....+.+++.|+|++.++....        |.|..++.. ++...........+.+. .++++.|+ +-+..+.|
T Consensus        80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i  158 (246)
T PF08450_consen   80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRI  158 (246)
T ss_dssp             TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTTTEE
T ss_pred             CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeeccccccee
Confidence                34567899999999977765543        457777777 44443333333334444 44565554 56678889


Q ss_pred             EEEecCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        338 SLWSILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       338 ~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      ..|++..... +..........   ......-.+++..+|++.++....+.|.+++.. |+.+..+...  ...+++++|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~---~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p--~~~~t~~~f  232 (246)
T PF08450_consen  159 WRFDLDADGGELSNRRVFIDFP---GGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELP--VPRPTNCAF  232 (246)
T ss_dssp             EEEEEETTTCCEEEEEEEEE-S---SSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-S--SSSEEEEEE
T ss_pred             EEEeccccccceeeeeeEEEcC---CCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCC--CCCEEEEEE
Confidence            9999864322 22111111000   011337889999999988887788899999987 8888888763  347999999


Q ss_pred             -cCCCCEEEEEe
Q psy17902        417 -TSDHKHLVAGI  427 (454)
Q Consensus       417 -s~d~~~l~~~~  427 (454)
                       -++.+.|++++
T Consensus       233 gg~~~~~L~vTt  244 (246)
T PF08450_consen  233 GGPDGKTLYVTT  244 (246)
T ss_dssp             ESTTSSEEEEEE
T ss_pred             ECCCCCEEEEEe
Confidence             47878887763

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.19  E-value=3.7e-08  Score=100.01  Aligned_cols=281  Identities=11%  Similarity=0.111  Sum_probs=168.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCC----eEEEEEcCCCc---eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902        143 ASITCIAVTSDSKHVYSACKDG----IIIKWLLETRS---KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK  215 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg----~i~iwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~  215 (454)
                      ..+...+|.+..+.++.+....    .|.+.......   .+..+..... ......|.++.|-++...++.+..+|.|.
T Consensus        22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~-~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~  100 (928)
T PF04762_consen   22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLP-DDPNDKIVSFQYLADSESLCIALASGDII  100 (928)
T ss_pred             cccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCC-cCCCCcEEEEEeccCCCcEEEEECCceEE
Confidence            3567777777655444333322    23333332222   1111111000 13456899999999999999999999999


Q ss_pred             EE----eCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------------C--------ceeEEE
Q psy17902        216 LW----SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---------------D--------RAYVET  268 (454)
Q Consensus       216 vw----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------------~--------~~~~~~  268 (454)
                      +.    +.....+...-.-...|.+++||||+..|+.++.+++|.+.+-.               .        |+.-..
T Consensus       101 ~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQ  180 (928)
T PF04762_consen  101 LVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQ  180 (928)
T ss_pred             EEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCc
Confidence            99    66555555555667899999999999999999999988876431               0        000000


Q ss_pred             eec------------------------cCCceeEEEeecCCCEEEEeeC---C---CcEEEeeccCCeEEEEccccCCe-
Q psy17902        269 LFG------------------------HQSAITSLDILAKNRVISSGGT---D---KSVRVWKIQEESQLVFNGHSRGI-  317 (454)
Q Consensus       269 ~~~------------------------~~~~v~~~~~~~~~~~l~~~~~---d---g~i~i~d~~~~~~~~~~~~~~~i-  317 (454)
                      |.|                        +...-..|+|-.||.++++.+.   .   ..++||+-. +..........+. 
T Consensus       181 F~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe  259 (928)
T PF04762_consen  181 FHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLE  259 (928)
T ss_pred             cCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCcc
Confidence            100                        2223457899999999998775   2   478999876 4443222222222 


Q ss_pred             EEEEe-cCCCEEEEEeC---CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        318 DMTRR-VNDQQFITCGE---DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       318 ~~~~~-~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ..+.| |.|+++++...   ...|.+|.- +|-.-..+.....     .....|..+.|++++.+||+...|. |.+|-.
T Consensus       260 ~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~-----~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~  332 (928)
T PF04762_consen  260 GALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFD-----PEEEKVIELAWNSDSEILAVWLEDR-VQLWTR  332 (928)
T ss_pred             CCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCC-----CCCceeeEEEECCCCCEEEEEecCC-ceEEEe
Confidence            34444 45555555442   345666653 3433333333221     1233489999999999999988665 999998


Q ss_pred             CCCcee--eEeccCCCceeeeEEEEcCCCCE-EEEEecCCCcee
Q psy17902        394 TPKRTL--EFLQDIPLSGVINSLVFTSDHKH-LVAGIGTEHRFG  434 (454)
Q Consensus       394 ~~~~~~--~~~~~~~~~~~v~~l~~s~d~~~-l~~~~~~d~~i~  434 (454)
                      .+..-.  +.+.. .....+..+.|+|...+ |.+. ..++.+.
T Consensus       333 ~NYHWYLKqei~~-~~~~~~~~~~Wdpe~p~~L~v~-t~~g~~~  374 (928)
T PF04762_consen  333 SNYHWYLKQEIRF-SSSESVNFVKWDPEKPLRLHVL-TSNGQYE  374 (928)
T ss_pred             eCCEEEEEEEEEc-cCCCCCCceEECCCCCCEEEEE-ecCCcEE
Confidence            876422  22222 12344556999996554 4444 3445553

>KOG2066|consensus

Probab=99.17  E-value=4e-09  Score=99.19  Aligned_cols=139  Identities=17%  Similarity=0.249  Sum_probs=105.0

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-----CcEEEEecCCCcEEEEeC---CCccE
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-----NELVASGDNNSNIKLWSS---SLEHL  224 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~v~vw~~---~~~~~  224 (454)
                      +|.++++|+.||.|.|-.+.+.+....+.       ...++.+++++|+     .+.+++|+.-| +.++.-   .....
T Consensus        82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~d-------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~  153 (846)
T KOG2066|consen   82 EGEYVASCSDDGKVVIGSLFTDDEITQYD-------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDS  153 (846)
T ss_pred             CCceEEEecCCCcEEEeeccCCccceeEe-------cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccc
Confidence            49999999999999999988877766655       3458999999997     56789999888 777764   22333


Q ss_pred             EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce------eEEEeecCCCEEEEeeCCCcEE
Q psy17902        225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI------TSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                      ..+....++|.++.|.  |+++|-++.+| |++||+.+++.+..+......+      ..+.|.++.++ +.| ...+|+
T Consensus       154 v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~L-VIG-W~d~v~  228 (846)
T KOG2066|consen  154 VVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRL-VIG-WGDSVK  228 (846)
T ss_pred             eeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeE-EEe-cCCeEE
Confidence            3566678999999997  77888888877 9999999988876664332322      45778765544 444 556799


Q ss_pred             EeeccC
Q psy17902        299 VWKIQE  304 (454)
Q Consensus       299 i~d~~~  304 (454)
                      |..++.
T Consensus       229 i~~I~~  234 (846)
T KOG2066|consen  229 ICSIKK  234 (846)
T ss_pred             EEEEec
Confidence            998883

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=99.17  E-value=2e-08  Score=87.20  Aligned_cols=218  Identities=14%  Similarity=0.139  Sum_probs=140.0

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      +|+|..||..+++.+....+..    ......+..+ +++..+++++.++.|..||. +++.+..+.. ...+.... ..
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~----~~~~~~~~~~-~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~   74 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGP----GIGGPVATAV-PDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VV   74 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSS----SCSSEEETEE-EETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EE
T ss_pred             CCEEEEEECCCCCEEEEEECCC----CCCCccceEE-EeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-ee
Confidence            6889999999888887765311    0122222233 34556777788999999998 7877776654 22222211 22


Q ss_pred             CCCEEEEEeCCCcEEEEeCCCceeEEEe-eccC---CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCC
Q psy17902        242 ECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQ---SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRG  316 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~  316 (454)
                      .+..+++++.++.|+.+|..+++.+... ....   ...........+..++++..++.|..+|+.+++.+ ........
T Consensus        75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~  154 (238)
T PF13360_consen   75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPR  154 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-
T ss_pred             cccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCC
Confidence            4567777778899999999999988774 3221   11122223334778888888999999999999987 33222211


Q ss_pred             ----------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        317 ----------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       317 ----------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                                +.......++.++.++.++.+..+|+.+++.+.... ...          +.. .....+..|++++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~d~~tg~~~w~~~-~~~----------~~~-~~~~~~~~l~~~~~~~  222 (238)
T PF13360_consen  155 GSSPISSFSDINGSPVISDGRVYVSSGDGRVVAVDLATGEKLWSKP-ISG----------IYS-LPSVDGGTLYVTSSDG  222 (238)
T ss_dssp             SS--EEEETTEEEEEECCTTEEEEECCTSSEEEEETTTTEEEEEEC-SS-----------ECE-CEECCCTEEEEEETTT
T ss_pred             CCcceeeecccccceEEECCEEEEEcCCCeEEEEECCCCCEEEEec-CCC----------ccC-CceeeCCEEEEEeCCC
Confidence                      122223334477788888864444999998665333 111          222 1346777888888999


Q ss_pred             cEEEEEcCCCcee
Q psy17902        387 CVKLWKITPKRTL  399 (454)
Q Consensus       387 ~v~iwd~~~~~~~  399 (454)
                      .|.+||+.+++.+
T Consensus       223 ~l~~~d~~tG~~~  235 (238)
T PF13360_consen  223 RLYALDLKTGKVV  235 (238)
T ss_dssp             EEEEEETTTTEEE
T ss_pred             EEEEEECCCCCEE
Confidence            9999999998754

...

>KOG0882|consensus

Probab=99.15  E-value=2e-09  Score=94.50  Aligned_cols=261  Identities=17%  Similarity=0.118  Sum_probs=172.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~  219 (454)
                      |++.|+.+..+. .+++.+++.||.++.|--..   +....+......|...|.+++.+-++.++++++. |..++++|+
T Consensus         8 hrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~---isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDv   83 (558)
T KOG0882|consen    8 HRDVITHVFPTK-AKFIIQASLDGHKKFWKKSR---ISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDV   83 (558)
T ss_pred             ccceeeeEeeeh-hheEEeeecchhhhhcCCCC---ccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEe
Confidence            899999887654 57999999999999995432   1223334444468888999999999999999777 999999998


Q ss_pred             -CCccE--EeecccCCCeEEEEEcCC-CC-EEE-EEeCCCcEEEEeCCCcee-EEE-eeccCCceeEEEeecCCCEEEEe
Q psy17902        220 -SLEHL--HTFTGHKAPITGLAISFE-CD-TLY-SSSNDRSIKVWNIEDRAY-VET-LFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       220 -~~~~~--~~~~~~~~~v~~~~~~~~-~~-~l~-~~~~dg~i~iwd~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                       +...+  ..+..-.+.+..+. ++. .. .|+ +.-.+|.|.++|-....+ ... -.-|..+|.++.+++.+..+++.
T Consensus        84 En~DminmiKL~~lPg~a~wv~-skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSi  162 (558)
T KOG0882|consen   84 ENFDMINMIKLVDLPGFAEWVT-SKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSI  162 (558)
T ss_pred             eccchhhhcccccCCCceEEec-CCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeec
Confidence             33332  22222333333221 221 11 233 334578999999765542 222 23599999999999999999999


Q ss_pred             eCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      ...|.|.-|.....  ..+            +..+           ..|.+.....+..++..         ....+++.
T Consensus       163 D~~gmVEyWs~e~~--~qf------------Pr~~-----------l~~~~K~eTdLy~f~K~---------Kt~pts~E  208 (558)
T KOG0882|consen  163 DISGMVEYWSAEGP--FQF------------PRTN-----------LNFELKHETDLYGFPKA---------KTEPTSFE  208 (558)
T ss_pred             cccceeEeecCCCc--ccC------------cccc-----------ccccccccchhhccccc---------ccCccceE
Confidence            99999999987741  111            0000           01333333333333222         22278999


Q ss_pred             EecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-------------------------------CCceeeeEEEEcCCC
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-------------------------------PLSGVINSLVFTSDH  420 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-------------------------------~~~~~v~~l~~s~d~  420 (454)
                      |+|+|..+.+-+.|..|+++.+.+++.++.+...                               .....-+.++|...|
T Consensus       209 fsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~  288 (558)
T KOG0882|consen  209 FSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESG  288 (558)
T ss_pred             EccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCC
Confidence            9999999999999999999999998765544321                               011234567888889


Q ss_pred             CEEEEEecCCCceeeeeeeCCC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++|+.+  .--.|.+.+..++.
T Consensus       289 ~flly~--t~~gikvin~~tn~  308 (558)
T KOG0882|consen  289 NFLLYG--TILGIKVINLDTNT  308 (558)
T ss_pred             CEEEee--cceeEEEEEeecCe
Confidence            999887  33445666665543

>PRK04043 tolB translocation protein TolB; Provisional

Probab=99.12  E-value=1.2e-07  Score=88.32  Aligned_cols=192  Identities=7%  Similarity=0.013  Sum_probs=119.9

Q ss_pred             ceEEEEEeCCCcE-EEEecC---CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEE-eC--CCcEEEEeCCCce
Q psy17902        192 PILALAVANNNEL-VASGDN---NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS-SN--DRSIKVWNIEDRA  264 (454)
Q Consensus       192 ~v~~~~~~~~~~~-l~~~~~---dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~--dg~i~iwd~~~~~  264 (454)
                      .+....|+|+|+. ++..+.   ...|.++|+.+.....+....+......|+|||+.|+.. +.  +..|.++|+.++.
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~  268 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT  268 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence            6778999999984 554433   356888898555555554556667778899999877654 33  3568888988776


Q ss_pred             eEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC-------
Q psy17902        265 YVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED-------  334 (454)
Q Consensus       265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-------  334 (454)
                      .. .+..+........|+|||+.|+..+. .+  .|+++|+.++....+...... ...+.+++..++..+..       
T Consensus       269 ~~-~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~-~~~~SPDG~~Ia~~~~~~~~~~~~  346 (419)
T PRK04043        269 LT-QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN-NSSVSTYKNYIVYSSRETNNEFGK  346 (419)
T ss_pred             EE-EcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCc-CceECCCCCEEEEEEcCCCcccCC
Confidence            43 34334433445689999987665543 33  688888887766432221111 23566778877765533       


Q ss_pred             --CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-C--cEEEEEcCCC
Q psy17902        335 --GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-G--CVKLWKITPK  396 (454)
Q Consensus       335 --g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~v~iwd~~~~  396 (454)
                        ..|.+.|+.++.. ..+... .         ......|+|||+.|+..+.. +  .+.+.++...
T Consensus       347 ~~~~I~v~d~~~g~~-~~LT~~-~---------~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~  402 (419)
T PRK04043        347 NTFNLYLISTNSDYI-RRLTAN-G---------VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYN  402 (419)
T ss_pred             CCcEEEEEECCCCCe-EECCCC-C---------CcCCeEECCCCCEEEEEEccCCcEEEEEEecCCC
Confidence              3677888877643 222211 1         12347899999977665533 2  3666666543

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.10  E-value=7e-08  Score=80.51  Aligned_cols=195  Identities=14%  Similarity=0.174  Sum_probs=125.2

Q ss_pred             EEEcCCCCEEEEEeCCCcEEEEeCCCc--eeEEEe---eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc
Q psy17902        237 LAISFECDTLYSSSNDRSIKVWNIEDR--AYVETL---FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN  311 (454)
Q Consensus       237 ~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~  311 (454)
                      ++.+.+|+.||+. .|..|-|-..++.  ..+...   +.....-+-++|+||+.+||.+...|+|++||+.........
T Consensus         3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~   81 (282)
T PF15492_consen    3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP   81 (282)
T ss_pred             eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC
Confidence            4567788766665 5677777765542  122222   122233578999999999999999999999999875554322


Q ss_pred             cc-------cCCeEEEEecC-------CCEEEEEeCCCCEEEEecCC-----CccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        312 GH-------SRGIDMTRRVN-------DQQFITCGEDGTLSLWSILK-----KVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       312 ~~-------~~~i~~~~~~~-------~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      ..       ...|..+.+..       ...|++-...|.++-|-+..     .+..+.+....      ..+..|.++.+
T Consensus        82 p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~------~yp~Gi~~~vy  155 (282)
T PF15492_consen   82 PAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSS------HYPHGINSAVY  155 (282)
T ss_pred             cccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecc------cCCCceeEEEE
Confidence            21       12334444432       22577788888888777632     22333333322      23556999999


Q ss_pred             ecCCCEEEEecCC-C----------cEEEEEcCCCceeeE--------------------ec-------cCCCceeeeEE
Q psy17902        373 LHNSDLVASGSYD-G----------CVKLWKITPKRTLEF--------------------LQ-------DIPLSGVINSL  414 (454)
Q Consensus       373 s~~~~~l~~~~~d-g----------~v~iwd~~~~~~~~~--------------------~~-------~~~~~~~v~~l  414 (454)
                      +|..++|++|+.. .          -+..|.+-++.+...                    +.       .......|..|
T Consensus       156 ~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~km  235 (282)
T PF15492_consen  156 HPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKM  235 (282)
T ss_pred             cCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEE
Confidence            9999988777642 1          266777654422111                    00       00124568899


Q ss_pred             EEcCCCCEEEEEecCCCceeeeeee
Q psy17902        415 VFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       415 ~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ..||||..||+. ..+|.|.+|...
T Consensus       236 SlSPdg~~La~i-h~sG~lsLW~iP  259 (282)
T PF15492_consen  236 SLSPDGSLLACI-HFSGSLSLWEIP  259 (282)
T ss_pred             EECCCCCEEEEE-EcCCeEEEEecC
Confidence            999999999998 899999999874

>KOG4532|consensus

Probab=99.09  E-value=4.9e-08  Score=80.23  Aligned_cols=235  Identities=9%  Similarity=-0.012  Sum_probs=152.7

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEE-EeCCCcEEEEecCCCcEEEEeCCCccEEeecccC-
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALA-VANNNELVASGDNNSNIKLWSSSLEHLHTFTGHK-  231 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~-  231 (454)
                      -.+||.|+..|.+.+|.+.+.+....+.-     .+...|.-+. +....--+..++.|.++++.++.+...... .|. 
T Consensus        84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd-----~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~-~h~~  157 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTNDGHLYQCD-----VSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFA-VHNQ  157 (344)
T ss_pred             ccEEEeccccceeeeecccCcccceeeec-----ccccchhhhhhhcccccceeeccCCcceeEEEEecCcccce-eecc
Confidence            35899999999999999886543322211     1222121110 001122366677888888888844333221 122 


Q ss_pred             -CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEE--eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE
Q psy17902        232 -APITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVET--LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       232 -~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                       -.+.+++++++++++++.+....|..|.+... +.+..  ....+..-.+..|+.....+|++..||++.|||++....
T Consensus       158 ~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t  237 (344)
T KOG4532|consen  158 NLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT  237 (344)
T ss_pred             ccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccccc
Confidence             23889999999999999999999999998653 22222  223444557788998899999999999999999997544


Q ss_pred             E------EEccccCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        308 L------VFNGHSRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       308 ~------~~~~~~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                      .      ....|.+.+..+.+...   ++|+..-.-+.+.+.|+++....+.+....... .......|..-.|+.++.-
T Consensus       238 pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~-~~~~tq~ifgt~f~~~n~s  316 (344)
T KOG4532|consen  238 PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVE-RKHNTQHIFGTNFNNENES  316 (344)
T ss_pred             chhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCcccc-ccccccccccccccCCCcc
Confidence            3      34457778887777743   355555567889999999988776665433221 0111122777777777776


Q ss_pred             EEEecCCCcEEEEEcCCC
Q psy17902        379 VASGSYDGCVKLWKITPK  396 (454)
Q Consensus       379 l~~~~~dg~v~iwd~~~~  396 (454)
                      +.+.+.+ .+.=|++.+.
T Consensus       317 ~~v~~e~-~~ae~ni~sr  333 (344)
T KOG4532|consen  317 NDVKNEL-QGAEYNILSR  333 (344)
T ss_pred             cccccch-hhheeecccc
Confidence            6666655 3666666543

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.08  E-value=1.1e-08  Score=85.76  Aligned_cols=251  Identities=18%  Similarity=0.271  Sum_probs=161.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCC------------CceEEEEEeCCC--cEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY------------PPILALAVANNN--ELVA  206 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~--~~l~  206 (454)
                      ....|+++.|...|.||++|...|.|.+|.-.... -+...+....++|.            ..|..+.|..++  ..++
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~-~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL  103 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSY-GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL  103 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeeccccc-ccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence            55679999999999999999999999999755432 12222222222222            357788887653  2355


Q ss_pred             EecCCCcEEEEeC-CC-------------------ccE-----------------------Eee-cccCCCeEEEEEcCC
Q psy17902        207 SGDNNSNIKLWSS-SL-------------------EHL-----------------------HTF-TGHKAPITGLAISFE  242 (454)
Q Consensus       207 ~~~~dg~v~vw~~-~~-------------------~~~-----------------------~~~-~~~~~~v~~~~~~~~  242 (454)
                      ..+.|.+|++|.+ ..                   .++                       +.+ ..|...|+++.|+.+
T Consensus       104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD  183 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD  183 (460)
T ss_pred             EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence            5566899999986 11                   000                       011 357778899999988


Q ss_pred             CCEEEEEeCCCcEEEEeCCCcee---EEEeeccC-----CceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-----
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQ-----SAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-----  308 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~-----~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-----  308 (454)
                      ...++++ .|=.|.+|++.-...   +..++.|.     .-|++..|+|.. +.+.-.+..|.|++-|++.....     
T Consensus       184 ~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k  262 (460)
T COG5170         184 KETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK  262 (460)
T ss_pred             hheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence            8888876 467799999864321   22334443     458899999875 56666788999999999843221     


Q ss_pred             ------------EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC-ccceeeecccCCCCC---CCCCCc---EEE
Q psy17902        309 ------------VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK-VPTHTIPVAHGYDSS---SSEPNW---ITS  369 (454)
Q Consensus       309 ------------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~---~~~~~~---i~~  369 (454)
                                  .+.+-...|..+.+++.++++.+-.--+|+|||++.. .|+.+++.+......   .-....   -..
T Consensus       263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe  342 (460)
T COG5170         263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE  342 (460)
T ss_pred             hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence                        1122234456666777776666666778999999764 567776543211000   001111   234


Q ss_pred             EEEecCCCEEEEecCCCcEEEEEc
Q psy17902        370 VACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      +.||-+...+++|+..+..-+|-.
T Consensus       343 isfSgd~~~v~sgsy~NNfgiyp~  366 (460)
T COG5170         343 ISFSGDDKHVLSGSYSNNFGIYPT  366 (460)
T ss_pred             EEecCCcccccccccccceeeecc
Confidence            677878788888888777777753

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.06  E-value=1.8e-07  Score=87.59  Aligned_cols=258  Identities=9%  Similarity=0.008  Sum_probs=157.2

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      +..++.++.+|.+..+|..+++.........       .+.+ ..+  .+..+++++.+|.|..+|. +++.+..+....
T Consensus       120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-------~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~  190 (394)
T PRK11138        120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-------EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDV  190 (394)
T ss_pred             CCEEEEEcCCCEEEEEECCCCCCcccccCCC-------ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCC
Confidence            4577788889999999999999887765421       1111 111  1345667778899999998 777776665321


Q ss_pred             CCeEE-EEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-------ceeEEEeec--CCCEEEEeeCCCcEEE
Q psy17902        232 APITG-LAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-------AITSLDILA--KNRVISSGGTDKSVRV  299 (454)
Q Consensus       232 ~~v~~-~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~~~dg~i~i  299 (454)
                      ..+.. ..-+|  .+..++.++.+|.+..+|..+++.+........       ....+..+|  .+..++.++.+|.+..
T Consensus       191 ~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~a  270 (394)
T PRK11138        191 PSLTLRGESAPATAFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVA  270 (394)
T ss_pred             CcccccCCCCCEEECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEE
Confidence            11100 00011  134577788899999999999887654421100       001111122  2456667778999999


Q ss_pred             eeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902        300 WKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       300 ~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      +|..+++.+-....... .. ....++.++.++.+|.+..+|..+++.+.........        ...+...  .+.+|
T Consensus       271 ld~~tG~~~W~~~~~~~-~~-~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~--------~~~sp~v--~~g~l  338 (394)
T PRK11138        271 LDLRSGQIVWKREYGSV-ND-FAVDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHR--------LLTAPVL--YNGYL  338 (394)
T ss_pred             EECCCCCEEEeecCCCc-cC-cEEECCEEEEEcCCCeEEEEECCCCcEEEcccccCCC--------cccCCEE--ECCEE
Confidence            99999877621111111 11 1224677888889999999999998776654321110        0111222  24578


Q ss_pred             EEecCCCcEEEEEcCCCceeeEeccCCCceeee-EEEEcCCCCEEEEEecCCCceeeee
Q psy17902        380 ASGSYDGCVKLWKITPKRTLEFLQDIPLSGVIN-SLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       380 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      ++++.+|.|.++|..+|+.+.....  ....+. +..+.  +..|+++ +.+|.|+.++
T Consensus       339 ~v~~~~G~l~~ld~~tG~~~~~~~~--~~~~~~s~P~~~--~~~l~v~-t~~G~l~~~~  392 (394)
T PRK11138        339 VVGDSEGYLHWINREDGRFVAQQKV--DSSGFLSEPVVA--DDKLLIQ-ARDGTVYAIT  392 (394)
T ss_pred             EEEeCCCEEEEEECCCCCEEEEEEc--CCCcceeCCEEE--CCEEEEE-eCCceEEEEe
Confidence            8899999999999999988766653  112222 22232  4467767 6888887664

>KOG2695|consensus

Probab=99.02  E-value=1.1e-09  Score=92.94  Aligned_cols=148  Identities=18%  Similarity=0.277  Sum_probs=117.4

Q ss_pred             EEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-----eeEEEeeccCCceeEEE
Q psy17902        206 ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-----AYVETLFGHQSAITSLD  280 (454)
Q Consensus       206 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~~~  280 (454)
                      ++.+.+-.|-+-++.+.....|. ..+.|.++.|...+++++.|+.+|.|..+|++.+     .+...+ -|.+.|+++.
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq  305 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQ  305 (425)
T ss_pred             ecccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhh
Confidence            44445667778888666666665 6778999999998999999999999999999865     344444 4899999998


Q ss_pred             eec-CCCEEEEeeCCCcEEEeeccCCeE---E-EEccccCCeEEE---EecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        281 ILA-KNRVISSGGTDKSVRVWKIQEESQ---L-VFNGHSRGIDMT---RRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       281 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~---~-~~~~~~~~i~~~---~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      ... ++.+|++.+.+|.|.+||++.-++   + .+.+|.....-+   ..+..+.+++++.|...+||.+..+..+.+++
T Consensus       306 ~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tip  385 (425)
T KOG2695|consen  306 ILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIP  385 (425)
T ss_pred             hhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccC
Confidence            876 678899999999999999997665   3 788887654322   23356788899999999999999999988887


Q ss_pred             ccc
Q psy17902        353 VAH  355 (454)
Q Consensus       353 ~~~  355 (454)
                      ...
T Consensus       386 f~~  388 (425)
T KOG2695|consen  386 FPY  388 (425)
T ss_pred             CCC
Confidence            654

>KOG4714|consensus

Probab=99.02  E-value=8.3e-09  Score=84.25  Aligned_cols=158  Identities=15%  Similarity=0.150  Sum_probs=102.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCCCcEEEEecC-----CCcE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANNNELVASGDN-----NSNI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~v  214 (454)
                      |+++=.+-+.+-.++.++++..||.+.+++.+..... ..++.     .|. .-.+.++...++++.++.-     -+..
T Consensus        88 ~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~-----~~~-~~as~~~~~~~~~i~s~~~g~~n~~d~~  161 (319)
T KOG4714|consen   88 NSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPS-----IHS-GSASRKICRHGNSILSGGCGNWNAQDNF  161 (319)
T ss_pred             cCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhccc-----ccc-cccccceeecccEEecCCcceEeeccce
Confidence            5555445455556788999999999999987752111 11111     111 1222333345555555432     1344


Q ss_pred             EEEeCCC-ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeE-EEeeccCCceeEEEeecCC-CEEEE
Q psy17902        215 KLWSSSL-EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYV-ETLFGHQSAITSLDILAKN-RVISS  290 (454)
Q Consensus       215 ~vw~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~-~~l~~  290 (454)
                      ++|++.. +.+..-......|.+++-+|. .+.+++|+.||.+-+||.+..... ..+..|..+|+.+.|+|.. ..|++
T Consensus       162 ~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft  241 (319)
T KOG4714|consen  162 YANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFT  241 (319)
T ss_pred             eeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeE
Confidence            5555521 111111112234889998885 457778889999999999987543 3456899999999999864 78999


Q ss_pred             eeCCCcEEEeeccC
Q psy17902        291 GGTDKSVRVWKIQE  304 (454)
Q Consensus       291 ~~~dg~i~i~d~~~  304 (454)
                      ++.||.+..||..+
T Consensus       242 ~sedGslw~wdas~  255 (319)
T KOG4714|consen  242 CSEDGSLWHWDAST  255 (319)
T ss_pred             ecCCCcEEEEcCCC
Confidence            99999999999876

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=99.01  E-value=1.9e-06  Score=75.00  Aligned_cols=214  Identities=10%  Similarity=0.059  Sum_probs=136.5

Q ss_pred             EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe-CCCcEEEEecCCCcEEEEeCCCcc
Q psy17902        146 TCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA-NNNELVASGDNNSNIKLWSSSLEH  223 (454)
Q Consensus       146 ~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~v~vw~~~~~~  223 (454)
                      -+++|.+ ++.++++-...+.|..|+..++.......         .....+++. +++.++++ .. +.+.++|.....
T Consensus         3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~---------~~~~G~~~~~~~g~l~v~-~~-~~~~~~d~~~g~   71 (246)
T PF08450_consen    3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDL---------PGPNGMAFDRPDGRLYVA-DS-GGIAVVDPDTGK   71 (246)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEES---------SSEEEEEEECTTSEEEEE-ET-TCEEEEETTTTE
T ss_pred             cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEec---------CCCceEEEEccCCEEEEE-Ec-CceEEEecCCCc
Confidence            3678888 67777777778999999998876543111         127778888 67655554 44 445666984443


Q ss_pred             EEeecc------cCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        224 LHTFTG------HKAPITGLAISFECDTLYSSSND--------RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       224 ~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      +..+..      .....+.+++.++|++.++....        |.|..++.. ++..... ..-...+.|+|+|+++.|+
T Consensus        72 ~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~ly  149 (246)
T PF08450_consen   72 VTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLY  149 (246)
T ss_dssp             EEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEE
T ss_pred             EEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchhee
Confidence            333221      34568899999999977776543        568888877 5543333 3345578999999998665


Q ss_pred             -EeeCCCcEEEeeccCCeE-E----EE---ccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        290 -SGGTDKSVRVWKIQEESQ-L----VF---NGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       290 -~~~~dg~i~i~d~~~~~~-~----~~---~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                       +-+..+.|..|++..... +    .+   .........+.. ..++.+++....+.|.+++.. ++.+..+.....   
T Consensus       150 v~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~---  225 (246)
T PF08450_consen  150 VADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVP---  225 (246)
T ss_dssp             EEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSS---
T ss_pred             ecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCC---
Confidence             566778899999864322 1    22   111112344444 456666666688999999987 888887776532   


Q ss_pred             CCCCCCcEEEEEEe-cCCCEEEEe
Q psy17902        360 SSSEPNWITSVACL-HNSDLVASG  382 (454)
Q Consensus       360 ~~~~~~~i~~~~~s-~~~~~l~~~  382 (454)
                            .+++++|. ++.+.|++.
T Consensus       226 ------~~t~~~fgg~~~~~L~vT  243 (246)
T PF08450_consen  226 ------RPTNCAFGGPDGKTLYVT  243 (246)
T ss_dssp             ------SEEEEEEESTTSSEEEEE
T ss_pred             ------CEEEEEEECCCCCEEEEE
Confidence                  28999995 565554443

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=99.00  E-value=3.1e-07  Score=85.93  Aligned_cols=264  Identities=13%  Similarity=0.056  Sum_probs=158.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC----CCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS----YPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~  227 (454)
                      +..+++++.+|.+.-+|..+++..............    ...+ ..+..  .+..++.++.+|.+..+|. +++.+...
T Consensus        69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~  146 (394)
T PRK11138         69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT  146 (394)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence            568888888899999999999887765542210000    0000 01122  3456777888999999998 77777766


Q ss_pred             cccCCCeEE-EEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----eEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        228 TGHKAPITG-LAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI-----TSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       228 ~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      .... .+.+ ...  .+..++.++.+|.|..+|..+|+.+..+......+     .+-..  .+..++.++.+|.+..+|
T Consensus       147 ~~~~-~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d  221 (394)
T PRK11138        147 KVAG-EALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVL  221 (394)
T ss_pred             cCCC-ceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEE
Confidence            5432 2221 112  24567778889999999999999887764321110     11111  133566677889999999


Q ss_pred             ccCCeEE-EEccc-c-C--------CeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        302 IQEESQL-VFNGH-S-R--------GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       302 ~~~~~~~-~~~~~-~-~--------~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      ..+++.. ..... . .        .+...-...++.+++++.+|.+..+|+.+++.+.......           ...+
T Consensus       222 ~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~-----------~~~~  290 (394)
T PRK11138        222 MEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS-----------VNDF  290 (394)
T ss_pred             ccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC-----------ccCc
Confidence            9888765 22110 0 0        0000011135677888889999999999998776654321           1112


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      .  ..+..|+.++.+|.|..+|..+++.+-...... .....+....  +.+|+++ +.+|.|...+..++
T Consensus       291 ~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~-~~~~~sp~v~--~g~l~v~-~~~G~l~~ld~~tG  355 (394)
T PRK11138        291 A--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLL-HRLLTAPVLY--NGYLVVG-DSEGYLHWINREDG  355 (394)
T ss_pred             E--EECCEEEEEcCCCeEEEEECCCCcEEEcccccC-CCcccCCEEE--CCEEEEE-eCCCEEEEEECCCC
Confidence            2  245677788889999999999886553322111 1112222222  4455555 56777777665544

>KOG3621|consensus

Probab=98.99  E-value=2.5e-07  Score=86.30  Aligned_cols=146  Identities=17%  Similarity=0.182  Sum_probs=104.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |...|.--+++..+.+|+.|+.-|.+++|+-..+.......     .+..+.+..+..+++..++|+|+..|.|.++-++
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~-----~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~  106 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKN-----EGATGITCVRSVSSVEYLVAAGTASGRVSVFQLN  106 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccc-----cCccceEEEEEecchhHhhhhhcCCceEEeehhh
Confidence            55666666777788999999999999999877654432221     1244567778889999999999999999999872


Q ss_pred             Cc----cEEe--e-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc----eeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        221 LE----HLHT--F-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR----AYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       221 ~~----~~~~--~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      ..    ....  . +.|...|++++|++++..+++|...|+|..-.+.+.    ...+.+....+.|..|.+. ++.+|+
T Consensus       107 ~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~-q~~LLV  185 (726)
T KOG3621|consen  107 KELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL-QSYLLV  185 (726)
T ss_pred             ccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc-cceehH
Confidence            21    1111  1 247889999999999999999999999999888772    1122333455677777765 344444


Q ss_pred             Eee
Q psy17902        290 SGG  292 (454)
Q Consensus       290 ~~~  292 (454)
                      +..
T Consensus       186 Stl  188 (726)
T KOG3621|consen  186 STL  188 (726)
T ss_pred             hhh
Confidence            433

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.99  E-value=1.5e-06  Score=75.06  Aligned_cols=227  Identities=15%  Similarity=0.095  Sum_probs=139.4

Q ss_pred             eEEEEEeC-CCcEEEEecCCC-cEEEEeC-CCccEEeecccCCCeE--EEEEcCCCCEEEEEe-----CCCcEEEEeCC-
Q psy17902        193 ILALAVAN-NNELVASGDNNS-NIKLWSS-SLEHLHTFTGHKAPIT--GLAISFECDTLYSSS-----NDRSIKVWNIE-  261 (454)
Q Consensus       193 v~~~~~~~-~~~~l~~~~~dg-~v~vw~~-~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~-----~dg~i~iwd~~-  261 (454)
                      ...++.+| .+..++.+-.-| ...+||. ++.....+....+.-.  --.|+++|++|++.-     ..|.|-|||.. 
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~   86 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR   86 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence            34567777 455666666655 4567888 5555544433222221  257999999999863     35889999998 


Q ss_pred             CceeEEEeeccCCceeEEEeecCCCEEEEee------------------CCCcEEEeeccCCeEE---EE--ccccCCeE
Q psy17902        262 DRAYVETLFGHQSAITSLDILAKNRVISSGG------------------TDKSVRVWKIQEESQL---VF--NGHSRGID  318 (454)
Q Consensus       262 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~dg~i~i~d~~~~~~~---~~--~~~~~~i~  318 (454)
                      +...+..+..|.-....+.+.|++..|+++.                  .+-.+...|..++..+   .+  ..|...+.
T Consensus        87 ~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiR  166 (305)
T PF07433_consen   87 GYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIR  166 (305)
T ss_pred             CcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcccccccee
Confidence            6677888888877778899999997777652                  1223445555666555   23  23555666


Q ss_pred             EEEecCCCEEEEEe-CCCC-----EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEE
Q psy17902        319 MTRRVNDQQFITCG-EDGT-----LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLW  391 (454)
Q Consensus       319 ~~~~~~~~~l~~~~-~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iw  391 (454)
                      .+....+..++.+. ..|.     -.+.-.+.+..+..+......  ...-..++-+|++++++.++++.+ ..|.+.+|
T Consensus       167 HLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~--~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~  244 (305)
T PF07433_consen  167 HLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQ--WRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVW  244 (305)
T ss_pred             eEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHH--HHhhCCceEEEEEeCCCCEEEEECCCCCEEEEE
Confidence            66666555555444 1111     111111222222222211100  012345699999999998776665 46789999


Q ss_pred             EcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        392 KITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       392 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      |..+++.+.....    ..+..++-.+++ +++++
T Consensus       245 d~~tg~~~~~~~l----~D~cGva~~~~~-f~~ss  274 (305)
T PF07433_consen  245 DAATGRLLGSVPL----PDACGVAPTDDG-FLVSS  274 (305)
T ss_pred             ECCCCCEeecccc----CceeeeeecCCc-eEEeC
Confidence            9999988876653    336677777776 55554

>KOG1275|consensus

Probab=98.98  E-value=1.8e-08  Score=96.17  Aligned_cols=182  Identities=15%  Similarity=0.220  Sum_probs=128.0

Q ss_pred             CcEEEEecCCCcEEEEeCCCccE-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        202 NELVASGDNNSNIKLWSSSLEHL-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       202 ~~~l~~~~~dg~v~vw~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      +..++.|+.-..+..+|+.+... ....-..+.|+-|+  .+++++++|...|+|.+-|.++.+.++++..|++.|..+.
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD  224 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD  224 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeee
Confidence            44566676667777888844443 33333333455555  4588999999999999999999999999999999997766


Q ss_pred             eecCCCEEEEeeC---------CCcEEEeeccCCeEEEEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCC-Cccc
Q psy17902        281 ILAKNRVISSGGT---------DKSVRVWKIQEESQLVFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILK-KVPT  348 (454)
Q Consensus       281 ~~~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~-~~~~  348 (454)
                      .  .|+.|++++.         |..|+|||++..+.+.-..-...-..+.+.+  ...+++++..|...+-|..+ ..+.
T Consensus       225 v--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~  302 (1118)
T KOG1275|consen  225 V--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP  302 (1118)
T ss_pred             c--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCc
Confidence            5  6889988875         5568999999877662222222223344433  45788899999999998432 2221


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ......+.      ....+..+.+|++|+.||.|..+|.|.+|.-
T Consensus       303 ~~~~~v~p------~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  303 AGVKMVNP------NGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             cceeEEcc------CCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            11111111      1233999999999999999999999999973

>KOG2695|consensus

Probab=98.97  E-value=3.4e-09  Score=89.98  Aligned_cols=144  Identities=22%  Similarity=0.229  Sum_probs=112.1

Q ss_pred             EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC------CccEEeecccC
Q psy17902        158 YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS------LEHLHTFTGHK  231 (454)
Q Consensus       158 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~------~~~~~~~~~~~  231 (454)
                      ++.+.+-.|-+-|++++.....        ...+.|.++.|...++++..|+.+|.|.++|+.      +.+.+.+ -|.
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf--------~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~  298 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSF--------QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHD  298 (425)
T ss_pred             ecccccceeEEEEeeccccccc--------ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcC
Confidence            4445566777888887654321        245679999999989999999999999999982      2334444 489


Q ss_pred             CCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEe--ecCCCEEEEeeCCCcEEEeeccCC
Q psy17902        232 APITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDI--LAKNRVISSGGTDKSVRVWKIQEE  305 (454)
Q Consensus       232 ~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~  305 (454)
                      ..|+++.... ++++|++.+.+|+|.+||++.-++   +..+.+|...-.-+-+  .+....+++++.|...+||.++.+
T Consensus       299 Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~g  378 (425)
T KOG2695|consen  299 SSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSG  378 (425)
T ss_pred             cchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccC
Confidence            9999998877 788999999999999999987776   8888888655443333  456678889999999999999998


Q ss_pred             eEEEE
Q psy17902        306 SQLVF  310 (454)
Q Consensus       306 ~~~~~  310 (454)
                      ..+..
T Consensus       379 hLl~t  383 (425)
T KOG2695|consen  379 HLLCT  383 (425)
T ss_pred             ceeec
Confidence            88733

>KOG0309|consensus

Probab=98.96  E-value=5.9e-09  Score=97.05  Aligned_cols=263  Identities=14%  Similarity=0.199  Sum_probs=162.2

Q ss_pred             CcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce
Q psy17902        116 GKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI  193 (454)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v  193 (454)
                      |-+...+-.++.++....+.     -.=.|-.+.|+|.  ..+-++......-.+|++....... +.  ....+|...|
T Consensus        46 gl~i~dld~p~~ppr~l~h~-----tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~a-Ie--f~lhghsrai  117 (1081)
T KOG0309|consen   46 GLYIIDLDDPFTPPRWLHHI-----TPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNA-IE--FVLHGHSRAI  117 (1081)
T ss_pred             CeEEEeccCCCCCceeeecc-----CcchhcceecccCCCCceeEEecCcchhhhhhhhcCCccc-eE--EEEecCccce
Confidence            33444444555555544321     1123667788875  3455555555667789886432211 11  1123788999


Q ss_pred             EEEEEeCCC-cEEEEecCCCcEEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEe
Q psy17902        194 LALAVANNN-ELVASGDNNSNIKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETL  269 (454)
Q Consensus       194 ~~~~~~~~~-~~l~~~~~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~  269 (454)
                      +.+.|+|.. ..+++++.|..+..||+  ...++..+..-......++|+.....+++.+....|++||++.+ .++..+
T Consensus       118 td~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~  197 (1081)
T KOG0309|consen  118 TDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSL  197 (1081)
T ss_pred             eccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEe
Confidence            999999864 57899999999999999  34555655555556678999986666777778888999999876 566788


Q ss_pred             eccCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeE-----------EEEecC-CCEEEEEeCC
Q psy17902        270 FGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGID-----------MTRRVN-DQQFITCGED  334 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~-----------~~~~~~-~~~l~~~~~d  334 (454)
                      ++|...|+++.|+.- ...+.+.+.||+|+.||.......  .......++.           ++.... ++.+..--.+
T Consensus       198 K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~  277 (1081)
T KOG0309|consen  198 KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCE  277 (1081)
T ss_pred             cccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeecccc
Confidence            899999999999754 356888999999999998754332  1111111111           111111 1111111222


Q ss_pred             CCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEec--------CCC--EEEEecCCCcEEEEEcCC
Q psy17902        335 GTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLH--------NSD--LVASGSYDGCVKLWKITP  395 (454)
Q Consensus       335 g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--------~~~--~l~~~~~dg~v~iwd~~~  395 (454)
                      .....|+..+ ..+++++..         |...|..+.|-.        +.+  .|+|-+.|.++++|-+.+
T Consensus       278 n~d~e~n~~~~~~pVh~F~G---------H~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~~  340 (1081)
T KOG0309|consen  278 NSDLEWNVFDLNTPVHTFVG---------HDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPIDS  340 (1081)
T ss_pred             chhhhhccccCCcceeeecC---------cchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeeccH
Confidence            2333344433 345555543         333344444432        212  699999999999998864

>KOG1275|consensus

Probab=98.95  E-value=5.1e-09  Score=99.72  Aligned_cols=184  Identities=17%  Similarity=0.167  Sum_probs=138.0

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEE
Q psy17902        242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMT  320 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~  320 (454)
                      ++..++.|+.-..+..+|+++.+..+...-..+.|+-+..  +++++++|...|+|.+-|.++.+.+ .+..|.+.+...
T Consensus       146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDf  223 (1118)
T KOG1275|consen  146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDF  223 (1118)
T ss_pred             CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceeee
Confidence            4557888888888999999988877665544445655554  6789999999999999999998887 888888877654


Q ss_pred             EecCCCEEEEEeC---------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEE
Q psy17902        321 RRVNDQQFITCGE---------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKL  390 (454)
Q Consensus       321 ~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~i  390 (454)
                      . ..|+.|++|+.         |..|+|||+++.+.+..+....+          ..-+.|+|.- ..+++++..|...+
T Consensus       224 D-v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~----------P~flrf~Psl~t~~~V~S~sGq~q~  292 (1118)
T KOG1275|consen  224 D-VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG----------PQFLRFHPSLTTRLAVTSQSGQFQF  292 (1118)
T ss_pred             e-ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC----------chhhhhcccccceEEEEecccceee
Confidence            3 46788888874         56789999999887777665543          2446677743 37888888999999


Q ss_pred             EEcCCC--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        391 WKITPK--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       391 wd~~~~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      -|..+-  .+.......+....+.++++|++|..|+.+ ..+|.|.+|.-.
T Consensus       293 vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafg-d~~g~v~~wa~~  342 (1118)
T KOG1275|consen  293 VDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFG-DHEGHVNLWADR  342 (1118)
T ss_pred             ccccccCCCccceeEEccCCCcceeEEecCCCceEEEe-cccCcEeeecCC
Confidence            983221  223333333455669999999999999999 899999999743

>KOG3617|consensus

Probab=98.93  E-value=9.2e-08  Score=90.73  Aligned_cols=109  Identities=18%  Similarity=0.179  Sum_probs=85.6

Q ss_pred             eEEEEEcCCCCEEEEEeC----CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        145 ITCIAVTSDSKHVYSACK----DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -+-.+|+|...++++++.    .|.|.||- ++++......       ..-.+++++|+|..-.|+.|-.-|.+.+|...
T Consensus        18 sti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt-------~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~   89 (1416)
T KOG3617|consen   18 STISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT-------YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTN   89 (1416)
T ss_pred             ccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc-------cceehhhhccChHHHHHhhccccceeEEEecC
Confidence            345679999999998864    48898883 3344332222       22246679999999899999999999999995


Q ss_pred             CccEEe-ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        221 LEHLHT-FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       221 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      ....++ ...|+.+|..+.|+++|+.++++..-|.|.+|...
T Consensus        90 ~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   90 TTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             CceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            555544 45799999999999999999999999999999875

>KOG4649|consensus

Probab=98.93  E-value=5.6e-06  Score=68.24  Aligned_cols=143  Identities=13%  Similarity=0.070  Sum_probs=97.8

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      ..+++.|+..+.+.--|..+++......+       ...|-+-+.- -|.+++.|+..|.+++.+. ++.....+.....
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~il-------g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~   94 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-------GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILET   94 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhh-------CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhh
Confidence            46788888889999999998888766543       2233333332 4678999999999999999 6667776654332


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~  304 (454)
                      -=......+++..+..|+.|++.+..|..+..++...+...+...+-++.|-...|+.+...|.|.--....
T Consensus        95 vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~  166 (354)
T KOG4649|consen   95 VKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNP  166 (354)
T ss_pred             hccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCC
Confidence            222345567899999999999999999999988887654444444455555333444455556554444443

>KOG2066|consensus

Probab=98.93  E-value=2.3e-07  Score=87.73  Aligned_cols=185  Identities=15%  Similarity=0.188  Sum_probs=134.5

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG  271 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  271 (454)
                      .++|++++  +++|+.|+.+|.|++++..+.. .+...|...      ..+|.++++|+.||+|.|-.+-+.+....+ .
T Consensus        41 ~is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~-d  110 (846)
T KOG2066|consen   41 AISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY-D  110 (846)
T ss_pred             HHHHHHhh--cceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeE-e
Confidence            45566664  5689999999999999997776 555556544      568999999999999999999888776655 3


Q ss_pred             cCCceeEEEeecC-----CCEEEEeeCCCcEEEeecc---CCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902        272 HQSAITSLDILAK-----NRVISSGGTDKSVRVWKIQ---EESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       272 ~~~~v~~~~~~~~-----~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                      ...++.+++++|+     .+.+++|+.-| +.++.-+   ....+......++|.++.|. +++++-++.+| |+|||+.
T Consensus       111 f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~-g~lIAWand~G-v~vyd~~  187 (846)
T KOG2066|consen  111 FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR-GNLIAWANDDG-VKVYDTP  187 (846)
T ss_pred             cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec-CcEEEEecCCC-cEEEecc
Confidence            5678999999998     46889999888 7777643   22233455666788888774 55566565555 9999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      +.+.+..++..+....   .......+.|.++.+ |+.|-.| +|+|..+.
T Consensus       188 ~~~~l~~i~~p~~~~R---~e~fpphl~W~~~~~-LVIGW~d-~v~i~~I~  233 (846)
T KOG2066|consen  188 TRQRLTNIPPPSQSVR---PELFPPHLHWQDEDR-LVIGWGD-SVKICSIK  233 (846)
T ss_pred             ccceeeccCCCCCCCC---cccCCCceEecCCCe-EEEecCC-eEEEEEEe
Confidence            9988888876663221   223345678877654 4455444 69999887

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.92  E-value=6.5e-07  Score=77.68  Aligned_cols=188  Identities=13%  Similarity=0.117  Sum_probs=123.1

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee-ccc
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF-TGH  230 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~-~~~  230 (454)
                      ++..+++++.++.|..||..+++...........  . ..   . . ..+..+++++.++.|..+|. +++.+... ...
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~--~-~~---~-~-~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~  106 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPI--S-GA---P-V-VDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTS  106 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCG--G-SG---E-E-EETTEEEEEETTSEEEEEETTTSCEEEEEEE-S
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeeccccc--c-ce---e-e-ecccccccccceeeeEecccCCcceeeeecccc
Confidence            5577888889999999999999887766541110  0 11   1 2 23445666667789999997 78877773 322


Q ss_pred             C---CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCc----------eeEEEeecCCCEEEEeeCCCcE
Q psy17902        231 K---APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA----------ITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       231 ~---~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                      .   .....+.....+..++++..++.|..+|+.+|+.+.........          +.+-....++ .++.++.++.+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~  185 (238)
T PF13360_consen  107 SPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRV  185 (238)
T ss_dssp             SCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSE
T ss_pred             ccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeE
Confidence            1   11222233334788999998999999999999998777653322          1122222234 66667777764


Q ss_pred             EEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcccee
Q psy17902        298 RVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHT  350 (454)
Q Consensus       298 ~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  350 (454)
                      ..+|+.+++.. ...............++.+++++.++.|..||+.+++.+..
T Consensus       186 ~~~d~~tg~~~-w~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~  237 (238)
T PF13360_consen  186 VAVDLATGEKL-WSKPISGIYSLPSVDGGTLYVTSSDGRLYALDLKTGKVVWQ  237 (238)
T ss_dssp             EEEETTTTEEE-EEECSS-ECECEECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred             EEEECCCCCEE-EEecCCCccCCceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence            44499999866 33333344443456788888888999999999999987653

...

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=98.92  E-value=3.4e-06  Score=72.90  Aligned_cols=227  Identities=14%  Similarity=0.118  Sum_probs=148.8

Q ss_pred             eEEEEEcC-CCCEEEEEeCCC-eEEEEEcCCCceecccCCcc--cCCCCCCceEEEEEeCCCcEEEEecC-----CCcEE
Q psy17902        145 ITCIAVTS-DSKHVYSACKDG-IIIKWLLETRSKVCSSPFVK--TDRKSYPPILALAVANNNELVASGDN-----NSNIK  215 (454)
Q Consensus       145 V~~~~~s~-~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~v~  215 (454)
                      ...++.+| ....++.+-.-| ...+||..++.....+....  .+.+|      -.|++||++|++.-.     .|.|-
T Consensus         7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGH------g~fs~dG~~LytTEnd~~~g~G~Ig   80 (305)
T PF07433_consen    7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGH------GVFSPDGRLLYTTENDYETGRGVIG   80 (305)
T ss_pred             ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecC------EEEcCCCCEEEEeccccCCCcEEEE
Confidence            45678888 455666666655 56789999888776554311  11233      579999999998744     48999


Q ss_pred             EEeCC--CccEEeecccCCCeEEEEEcCCCCEEEEEe------------------CCCcEEEEeCCCceeEEEee----c
Q psy17902        216 LWSSS--LEHLHTFTGHKAPITGLAISFECDTLYSSS------------------NDRSIKVWNIEDRAYVETLF----G  271 (454)
Q Consensus       216 vw~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~dg~i~iwd~~~~~~~~~~~----~  271 (454)
                      |||..  ...+..+..|.-....+.+.||+..|+++-                  .+..+.+.|..+|+.+....    -
T Consensus        81 Vyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~  160 (305)
T PF07433_consen   81 VYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDL  160 (305)
T ss_pred             EEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccc
Confidence            99994  566677877777777889999998888762                  23355667778888776532    3


Q ss_pred             cCCceeEEEeecCCCEEEEeeCCCc-------EEEeeccCCeEE-E-----EccccCCeEEEEecC-CCEEEEEe-CCCC
Q psy17902        272 HQSAITSLDILAKNRVISSGGTDKS-------VRVWKIQEESQL-V-----FNGHSRGIDMTRRVN-DQQFITCG-EDGT  336 (454)
Q Consensus       272 ~~~~v~~~~~~~~~~~l~~~~~dg~-------i~i~d~~~~~~~-~-----~~~~~~~i~~~~~~~-~~~l~~~~-~dg~  336 (454)
                      |...|+.+++.++|..++..-..|.       |.+++....-.. .     ...-...+-++.+.. +..+++.| ..+.
T Consensus       161 ~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~  240 (305)
T PF07433_consen  161 HQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGR  240 (305)
T ss_pred             cccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCE
Confidence            7788999999999877765543332       333333221111 1     112234455555554 45565555 6788


Q ss_pred             EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902        337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL  390 (454)
Q Consensus       337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  390 (454)
                      +.+||..++..+.......           +..++..+++ ++++.+ .|.+..
T Consensus       241 ~~~~d~~tg~~~~~~~l~D-----------~cGva~~~~~-f~~ssG-~G~~~~  281 (305)
T PF07433_consen  241 VAVWDAATGRLLGSVPLPD-----------ACGVAPTDDG-FLVSSG-QGQLIR  281 (305)
T ss_pred             EEEEECCCCCEeeccccCc-----------eeeeeecCCc-eEEeCC-CccEEE
Confidence            9999999999888776544           6777777776 555544 454333

>KOG4714|consensus

Probab=98.92  E-value=6.9e-08  Score=79.03  Aligned_cols=144  Identities=15%  Similarity=0.225  Sum_probs=94.2

Q ss_pred             CCcEEEEecCCCcEEEEeCCC--ccEEeecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCCceeEEEeeccC
Q psy17902        201 NNELVASGDNNSNIKLWSSSL--EHLHTFTGHKAPITGLAISFECDTLYSSSN-----DRSIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~  273 (454)
                      .++-+++++.||.+.+++...  ........-...-.+.+....++.+.++..     -+..++|+++..+.+..-....
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~  179 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKAL  179 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccccccccccccc
Confidence            456799999999999999733  111111111111222333344555554432     2345566665443322222223


Q ss_pred             CceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCC
Q psy17902        274 SAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       274 ~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~  344 (454)
                      ..|++++-+|.. +++++|+.||.+-+||.+.....  .+..|...+.-+.|++  +..|++++.||.+..||..+
T Consensus       180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~  255 (319)
T KOG4714|consen  180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST  255 (319)
T ss_pred             ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence            348999999875 67788899999999999987555  6778888887777764  56899999999999999764

>KOG1920|consensus

Probab=98.87  E-value=3.8e-06  Score=83.37  Aligned_cols=201  Identities=11%  Similarity=0.070  Sum_probs=129.9

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC----C---
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE----D---  262 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~----~---  262 (454)
                      ...|.++.|..+...++.+...|.|.+-|.....+...-.-...|.+++|+||+..++..+..+++.+-+-.    .   
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E~~  147 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAEKP  147 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhccc
Confidence            358999999999999999999999999998666666666667889999999999999999888887664321    0   


Q ss_pred             ----------------ceeEEEeecc---------------------CCceeEEEeecCCCEEEEee----CC-CcEEEe
Q psy17902        263 ----------------RAYVETLFGH---------------------QSAITSLDILAKNRVISSGG----TD-KSVRVW  300 (454)
Q Consensus       263 ----------------~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~----~d-g~i~i~  300 (454)
                                      |+.-..|.+.                     .+.=++|+|--||.++++..    .+ ..|+||
T Consensus       148 L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~  227 (1265)
T KOG1920|consen  148 LDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVY  227 (1265)
T ss_pred             cccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEe
Confidence                            0100111111                     11124589999999998732    23 789999


Q ss_pred             eccCCeEEE-EccccCCeEEEEec-CCCEEEEEe---CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        301 KIQEESQLV-FNGHSRGIDMTRRV-NDQQFITCG---EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       301 d~~~~~~~~-~~~~~~~i~~~~~~-~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      |-. +..-. -....+.-.++.|- .|..+++..   +|+.|.+|.-+. -.-..+.....     .....+..++|+.+
T Consensus       228 drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNG-L~hg~f~l~~p-----~de~~ve~L~Wns~  300 (1265)
T KOG1920|consen  228 DRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNG-LRHGEFVLPFP-----LDEKEVEELAWNSN  300 (1265)
T ss_pred             ccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCC-ccccccccCCc-----ccccchheeeecCC
Confidence            987 33221 11122222344444 455555433   566788887532 11111111111     12223899999999


Q ss_pred             CCEEEE---ecCCCcEEEEEcCCCc
Q psy17902        376 SDLVAS---GSYDGCVKLWKITPKR  397 (454)
Q Consensus       376 ~~~l~~---~~~dg~v~iwd~~~~~  397 (454)
                      +.+||+   ......|++|-+.+..
T Consensus       301 sdiLAv~~~~~e~~~v~lwt~~Nyh  325 (1265)
T KOG1920|consen  301 SDILAVVTSNLENSLVQLWTTGNYH  325 (1265)
T ss_pred             CCceeeeecccccceEEEEEecCeE
Confidence            999988   4445569999987763

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.83  E-value=1.7e-08  Score=59.47  Aligned_cols=37  Identities=35%  Similarity=0.562  Sum_probs=34.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWL  170 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd  170 (454)
                      ..+.|.+  |.+.|++|+|+|++++|++|+.|+.|++||
T Consensus         3 ~~~~~~~--h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRG--HSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEES--SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcC--CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            4677888  999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1645|consensus

Probab=98.83  E-value=1.4e-06  Score=76.01  Aligned_cols=241  Identities=11%  Similarity=0.084  Sum_probs=132.2

Q ss_pred             CCCCceEEEEEeCCCc-EEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCce
Q psy17902        188 KSYPPILALAVANNNE-LVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRA  264 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~  264 (454)
                      .+...|..++|+|..+ ++..++.+..|.|.|+ +...+..+..+ ..+++++|.-+ .++|++|..+|.|.|||++..+
T Consensus       191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~  269 (463)
T KOG1645|consen  191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE  269 (463)
T ss_pred             ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence            5777899999999877 7888999999999999 55556666666 78999999875 4678888899999999998654


Q ss_pred             eE-EEeec--cCCceeEEEe------ecCCCEEEEeeCCCcEEEeeccCCe----EEEEccccCCeEEEEe-cCCCEEE-
Q psy17902        265 YV-ETLFG--HQSAITSLDI------LAKNRVISSGGTDKSVRVWKIQEES----QLVFNGHSRGIDMTRR-VNDQQFI-  329 (454)
Q Consensus       265 ~~-~~~~~--~~~~v~~~~~------~~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~i~~~~~-~~~~~l~-  329 (454)
                      -. ..+.+  ...+|..++.      .+.+.+|+....+  +..|.+....    ++.-.+..+....+.. ...+.++ 
T Consensus       270 ~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~  347 (463)
T KOG1645|consen  270 GPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLL  347 (463)
T ss_pred             chHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccceEEE
Confidence            22 12211  2334444443      2334555544433  4455543211    1111111222211111 1122222 


Q ss_pred             EEeCCC---CEE----EEecCCCccceeeeccc-CCCCCCCCCCcEEEEEEecCCCE-EEEecCCCcEEEEEcCCCceee
Q psy17902        330 TCGEDG---TLS----LWSILKKVPTHTIPVAH-GYDSSSSEPNWITSVACLHNSDL-VASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       330 ~~~~dg---~i~----iwd~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                      +.-.+.   +++    --|...+.++......+ +......+.  -..+.-.++.++ +.+|...+.+.+||..+...+.
T Consensus       348 tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t--~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ  425 (463)
T KOG1645|consen  348 TYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLST--TQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQ  425 (463)
T ss_pred             EecCCCCCccceeeeeeeccccCceeeeecccccCCccccccc--ccceeccccccEEEEecCCcceeEEeccchhheee
Confidence            221110   000    11223333333322222 111110010  111222334454 4455566789999999998888


Q ss_pred             EeccCCCceeeeEEEEcCC--CCEEEEEecCCCceeeeee
Q psy17902        401 FLQDIPLSGVINSLVFTSD--HKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d--~~~l~~~~~~d~~i~~W~~  438 (454)
                      .+.   ...+|.+++...-  +.+|++-  .|..+.++..
T Consensus       426 ~l~---~~epv~Dicp~~~n~~syLa~L--Td~~v~Iyk~  460 (463)
T KOG1645|consen  426 TLA---LSEPVLDICPNDTNGSSYLALL--TDDRVHIYKN  460 (463)
T ss_pred             ecc---cCcceeecceeecCCcchhhhe--ecceEEEEec
Confidence            776   4578888876542  4466665  4666666654

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.80  E-value=1.6e-05  Score=69.62  Aligned_cols=249  Identities=10%  Similarity=0.127  Sum_probs=144.9

Q ss_pred             EEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCccc-CCCCCCceEEEEEeCCCcEEEEecC--CC
Q psy17902        146 TCIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKT-DRKSYPPILALAVANNNELVASGDN--NS  212 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~--dg  212 (454)
                      -.+..+|+++.+++++          ..-.|.+||..+......+.++.. ..........++++.+++++++...  ..
T Consensus        39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~  118 (342)
T PF06433_consen   39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT  118 (342)
T ss_dssp             EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred             CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence            3467899999998764          234899999999877765554322 1111123445688889988877643  45


Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeEEEe----eccCCce-eEEEeecCCC
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYVETL----FGHQSAI-TSLDILAKNR  286 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~----~~~~~~v-~~~~~~~~~~  286 (454)
                      +|.|-|+..+.+..-..-.+...  .+-.....|.+-|.||.+.-..+. .|+.....    .....++ ..-.+...+.
T Consensus       119 SVtVVDl~~~kvv~ei~~PGC~~--iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~  196 (342)
T PF06433_consen  119 SVTVVDLAAKKVVGEIDTPGCWL--IYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGG  196 (342)
T ss_dssp             EEEEEETTTTEEEEEEEGTSEEE--EEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTT
T ss_pred             eEEEEECCCCceeeeecCCCEEE--EEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCC
Confidence            78888984444433222233222  221123468888899999998887 44443221    1112222 2334444555


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEE---Ecc----------ccCCeEEEEec-CCCEEEEEe---CCC-------CEEEEec
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLV---FNG----------HSRGIDMTRRV-NDQQFITCG---EDG-------TLSLWSI  342 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~---~~~----------~~~~i~~~~~~-~~~~l~~~~---~dg-------~i~iwd~  342 (454)
                      .++-.+..|.|+-.|+.......   +..          .+++...+.++ ..++|++.-   .+|       .|-+||+
T Consensus       197 ~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~  276 (342)
T PF06433_consen  197 RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDL  276 (342)
T ss_dssp             EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEET
T ss_pred             eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEEC
Confidence            55546789999998887765431   110          11222333332 344433321   111       4788899


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEE-ecCCCcEEEEEcCCCceeeEeccCC
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVAS-GSYDGCVKLWKITPKRTLEFLQDIP  406 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~  406 (454)
                      .+++.+.+++..+.          +.+|+.+.+.. +|++ ...++.|.+||..+|+.++.+..+.
T Consensus       277 ~t~krv~Ri~l~~~----------~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG  332 (342)
T PF06433_consen  277 KTHKRVARIPLEHP----------IDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG  332 (342)
T ss_dssp             TTTEEEEEEEEEEE----------ESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred             CCCeEEEEEeCCCc----------cceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence            99999999987543          77899998776 6654 4568999999999999999888643

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.80  E-value=1.1e-05  Score=74.16  Aligned_cols=259  Identities=14%  Similarity=0.079  Sum_probs=140.3

Q ss_pred             cCCCCEEEEEe---------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        151 TSDSKHVYSAC---------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       151 s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      |||+++++...         ..+.+.|||+.++.......       ....+....|+|+|+.++... ++.|.+++...
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~-------~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~   72 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP-------PPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLAT   72 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS--------EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTT
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC-------CccccccceeecCCCeeEEEe-cCceEEEECCC
Confidence            67888887743         34688999999876554433       245788899999999999887 57899998733


Q ss_pred             ccEEeeccc------------------CCCeEEEEEcCCCCEEEEEeCC-Cc----------------------------
Q psy17902        222 EHLHTFTGH------------------KAPITGLAISFECDTLYSSSND-RS----------------------------  254 (454)
Q Consensus       222 ~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d-g~----------------------------  254 (454)
                      .....+...                  -+.-.++.||||+++|+....| ..                            
T Consensus        73 ~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G  152 (353)
T PF00930_consen   73 GQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAG  152 (353)
T ss_dssp             SEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTT
T ss_pred             CCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCC
Confidence            333322211                  1223568899999988876432 11                            


Q ss_pred             -------EEEEeCCCceeEE-E-e---eccCCceeEEEeecCCCEEEEee--CCC---cEEEeeccCCeEE-EEc-cccC
Q psy17902        255 -------IKVWNIEDRAYVE-T-L---FGHQSAITSLDILAKNRVISSGG--TDK---SVRVWKIQEESQL-VFN-GHSR  315 (454)
Q Consensus       255 -------i~iwd~~~~~~~~-~-~---~~~~~~v~~~~~~~~~~~l~~~~--~dg---~i~i~d~~~~~~~-~~~-~~~~  315 (454)
                             +.|+|+.+++... . .   ..-...+..+.|.+++..|+..-  .+.   .+.++|..++... ... ....
T Consensus       153 ~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~  232 (353)
T PF00930_consen  153 DPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDG  232 (353)
T ss_dssp             S---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSS
T ss_pred             CcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCc
Confidence                   2234444443211 1 1   12334577888988887333332  222   4666677665443 221 1111


Q ss_pred             Ce----EEEEe-cCCC-EEEEEeCCCCEEEE--ecCCCccceeeecccCCCCCCCCCCcEE-EEEEecCCCEE-EEecCC
Q psy17902        316 GI----DMTRR-VNDQ-QFITCGEDGTLSLW--SILKKVPTHTIPVAHGYDSSSSEPNWIT-SVACLHNSDLV-ASGSYD  385 (454)
Q Consensus       316 ~i----~~~~~-~~~~-~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l-~~~~~d  385 (454)
                      -+    ....+ +++. ++.....+|.-+||  +...+... .+  ..+       .-.|. -+.++++++.| +++..+
T Consensus       233 Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~l--T~G-------~~~V~~i~~~d~~~~~iyf~a~~~  302 (353)
T PF00930_consen  233 WVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QL--TSG-------DWEVTSILGWDEDNNRIYFTANGD  302 (353)
T ss_dssp             SSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ES--S-S-------SS-EEEEEEEECTSSEEEEEESSG
T ss_pred             ceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-cc--ccC-------ceeecccceEcCCCCEEEEEecCC
Confidence            11    22333 3444 44445577765555  44444322 22  111       12254 47778877743 444442


Q ss_pred             --C--cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        386 --G--CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       386 --g--~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                        +  .|..-++..+..+..+...  .+.-..+.|||+|++++..++.
T Consensus       303 ~p~~r~lY~v~~~~~~~~~~LT~~--~~~~~~~~~Spdg~y~v~~~s~  348 (353)
T PF00930_consen  303 NPGERHLYRVSLDSGGEPKCLTCE--DGDHYSASFSPDGKYYVDTYSG  348 (353)
T ss_dssp             GTTSBEEEEEETTETTEEEESSTT--SSTTEEEEE-TTSSEEEEEEES
T ss_pred             CCCceEEEEEEeCCCCCeEeccCC--CCCceEEEECCCCCEEEEEEcC
Confidence              2  4555555523445555531  1212589999999999877554

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.78  E-value=3.2e-08  Score=58.30  Aligned_cols=39  Identities=33%  Similarity=0.614  Sum_probs=36.7

Q ss_pred             ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        263 RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      ++++..+.+|...|++|+|+|++++|++++.|+.|++||
T Consensus         1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            467889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1645|consensus

Probab=98.78  E-value=4.2e-07  Score=79.11  Aligned_cols=219  Identities=12%  Similarity=0.043  Sum_probs=129.9

Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEE
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISS  290 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~  290 (454)
                      |++.+. +.+....+..|...|..++|+|..+ ++..++.+..|+|.|+++...+..+..+ ..+++++|.-+. ++|+.
T Consensus       175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYa  253 (463)
T KOG1645|consen  175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYA  253 (463)
T ss_pred             eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEE
Confidence            555555 5555667778889999999999766 7888999999999999999999888877 789999998765 78899


Q ss_pred             eeCCCcEEEeeccCCeEE--EEcc--ccCCeEEE-------EecCCCEEEEEeCCCCEEEEecCCC--ccceeeecccCC
Q psy17902        291 GGTDKSVRVWKIQEESQL--VFNG--HSRGIDMT-------RRVNDQQFITCGEDGTLSLWSILKK--VPTHTIPVAHGY  357 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~--~~~~--~~~~i~~~-------~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~  357 (454)
                      |-..|.|.|||++...-.  .+.+  ...++..+       .++.+..++..+.+  +..|++...  ......+..   
T Consensus       254 Gl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele---  328 (463)
T KOG1645|consen  254 GLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE---  328 (463)
T ss_pred             eccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC---
Confidence            999999999999976544  1111  12222222       23334444444433  445554322  122222211   


Q ss_pred             CCCCCCCCcEEEEEEecCCC-EEEEecCCC------cEEE-EEcCCCceeeEeccCCCce------eeeEEEEcCCCCEE
Q psy17902        358 DSSSSEPNWITSVACLHNSD-LVASGSYDG------CVKL-WKITPKRTLEFLQDIPLSG------VINSLVFTSDHKHL  423 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg------~v~i-wd~~~~~~~~~~~~~~~~~------~v~~l~~s~d~~~l  423 (454)
                           .++...++++++..+ +|++.-.+-      .|-. -|..+|.++...+....++      .-..+.=.++..+|
T Consensus       329 -----~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~i  403 (463)
T KOG1645|consen  329 -----PPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYI  403 (463)
T ss_pred             -----CCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEE
Confidence                 133356666666444 444433321      0100 1112222222111100000      01122335667888


Q ss_pred             EEEecCCCceeeeeeeCCCe
Q psy17902        424 VAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +..++....+++||......
T Consensus       404 v~~gd~tn~lil~D~~s~ev  423 (463)
T KOG1645|consen  404 VVVGDSTNELILQDPHSFEV  423 (463)
T ss_pred             EEecCCcceeEEeccchhhe
Confidence            87767788899999876544

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.77  E-value=1.9e-05  Score=75.88  Aligned_cols=269  Identities=10%  Similarity=0.083  Sum_probs=156.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceE--EEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeeccc
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIL--ALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGH  230 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~  230 (454)
                      +..+++++.++.|.-.|..+++.................+.  .+++. ++..++.++.+|.|..+|. +++.+..+...
T Consensus        61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~  139 (488)
T cd00216          61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN  139 (488)
T ss_pred             CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence            45677788889999999999988776553221000001111  11221 2257888888999999999 77777766543


Q ss_pred             CCC-----eE-EEEEcCCCCEEEEEe---------CCCcEEEEeCCCceeEEEeeccCC--------------------c
Q psy17902        231 KAP-----IT-GLAISFECDTLYSSS---------NDRSIKVWNIEDRAYVETLFGHQS--------------------A  275 (454)
Q Consensus       231 ~~~-----v~-~~~~~~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~--------------------~  275 (454)
                      ...     +. +..+.  +..++.++         .+|.|..+|..+++.+..+.....                    .
T Consensus       140 ~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~  217 (488)
T cd00216         140 DQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT  217 (488)
T ss_pred             CCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence            221     11 11222  24555554         367899999999998776643211                    0


Q ss_pred             e-eEEEeecCCCEEEEeeCCC------------------cEEEeeccCCeEE-EEcc--cc--------CCeE-EEEecC
Q psy17902        276 I-TSLDILAKNRVISSGGTDK------------------SVRVWKIQEESQL-VFNG--HS--------RGID-MTRRVN  324 (454)
Q Consensus       276 v-~~~~~~~~~~~l~~~~~dg------------------~i~i~d~~~~~~~-~~~~--~~--------~~i~-~~~~~~  324 (454)
                      | .+.++.+.+..++.++.++                  .|.-+|+.+++.. .+..  +.        .++. .+...+
T Consensus       218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~  297 (488)
T cd00216         218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKD  297 (488)
T ss_pred             ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccC
Confidence            1 1234445566777777665                  6999999999887 3321  11        0010 000012


Q ss_pred             CC---EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE------------------ec
Q psy17902        325 DQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS------------------GS  383 (454)
Q Consensus       325 ~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~------------------~~  383 (454)
                      +.   .+++++.+|.+..+|..+++.+........            .++.+|  ..++.                  ..
T Consensus       298 g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~------------~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~  363 (488)
T cd00216         298 GKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQ------------PMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKP  363 (488)
T ss_pred             CCeeEEEEEECCCceEEEEECCCCcEeeEeEeecc------------ccccCC--ceEEEccccccccCcccccCCCCCC
Confidence            22   577888999999999999999887764311            122222  12222                  22


Q ss_pred             CCCcEEEEEcCCCceeeEeccCCCc------eee--eEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        384 YDGCVKLWKITPKRTLEFLQDIPLS------GVI--NSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       384 ~dg~v~iwd~~~~~~~~~~~~~~~~------~~v--~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .+|.|.-.|+.+|+.+-......+.      .+.  ..+..  .+..|+++ +.||.|+.++..++.
T Consensus       364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g-~~dG~l~ald~~tG~  427 (488)
T cd00216         364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAG-AADGYFRAFDATTGK  427 (488)
T ss_pred             CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEE-CCCCeEEEEECCCCc
Confidence            4677888888888665544431000      111  12222  35677777 678888888776653

The alignment model contains an 8-bladed beta-propeller.

>KOG4649|consensus

Probab=98.77  E-value=1.3e-05  Score=66.08  Aligned_cols=258  Identities=12%  Similarity=0.123  Sum_probs=137.2

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      |++++.|+..|.+++.+..++.+...+...       ..|.+ ....+++.++..|+.|++.+..|. +...+...+...
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-------~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG  135 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-------ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGG  135 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeeh-------hhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCC
Confidence            678999999999999999999877665531       12222 234568899999999999999999 666677666544


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec--cCCceeE--EEeecCCCEEEEeeCCCcEEEee------
Q psy17902        232 APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG--HQSAITS--LDILAKNRVISSGGTDKSVRVWK------  301 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~--~~~~~~~~~l~~~~~dg~i~i~d------  301 (454)
                      +...+-+..|-...|+.+...|.|.--..+....- .+-.  ..++|.+  ++.   +..+..+.-||.+.-++      
T Consensus       136 ~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~-~~w~~~~~~PiF~splcv---~~sv~i~~VdG~l~~f~~sG~qv  211 (354)
T KOG4649|consen  136 GTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSST-EFWAATRFGPIFASPLCV---GSSVIITTVDGVLTSFDESGRQV  211 (354)
T ss_pred             ceeccceecCCCceEEEEeccceEEEEccCCCCcc-eehhhhcCCccccCceec---cceEEEEEeccEEEEEcCCCcEE
Confidence            44444455664445666666677666665544211 1111  1223221  111   22333344455544444      


Q ss_pred             --ccCCeEEEEccccC-Ce-EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe-cC-
Q psy17902        302 --IQEESQLVFNGHSR-GI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL-HN-  375 (454)
Q Consensus       302 --~~~~~~~~~~~~~~-~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~-  375 (454)
                        .+++..+....... +. ..+.+.+.+-|.+...-..-.+|..+++...+.+....            ..++++ |. 
T Consensus       212 wr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~------------l~F~~h~~~~  279 (354)
T KOG4649|consen  212 WRPATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPK------------LRFDLHSPGI  279 (354)
T ss_pred             EeecCCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCcc------------cceeccCCCC
Confidence              44433331111110 11 23333344444444433345567776664443332111            012222 11 


Q ss_pred             --CCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee---eeEEE-----Ec-C---CCCEEEEEecCCCceeeeeeeC
Q psy17902        376 --SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV---INSLV-----FT-S---DHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       376 --~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~---v~~l~-----~s-~---d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                        .++|..++.||.+.|.-...  .+..+..  +.+.   +..+.     |+ |   +|+ |+.+ +.|.-++.|+...
T Consensus       280 S~~~ll~~~s~dgkv~il~~~~--sl~~~~s--~~g~lq~~~~~el~~eIFsSPvii~gr-l~ig-cRDdYv~cldl~~  352 (354)
T KOG4649|consen  280 SYPKLLRRSSGDGKVMILMTSK--SLAEISS--NGGELQNLEAIELSNEIFSSPVIIDGR-LLIG-CRDDYVRCLDLDT  352 (354)
T ss_pred             cchhhhhhhcCCCcEEEEEecc--ccccccc--CCCccceEEEeecCcccccCCeEEccE-EEEE-EccCeEEEEeccc
Confidence              34788888999998874432  1222221  2221   22221     21 2   444 5566 6899999998764

>KOG2114|consensus

Probab=98.76  E-value=5.2e-06  Score=79.50  Aligned_cols=202  Identities=15%  Similarity=0.226  Sum_probs=132.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCc-eEEEEEeCCCcEEEEecCCC-----cEEEE
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP-ILALAVANNNELVASGDNNS-----NIKLW  217 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg-----~v~vw  217 (454)
                      .|+|  |++.+..++.|+.+|.|.+++-. .+.+..+.      .+... |..+....+..+|++.+.|+     .|+||
T Consensus        27 ~isc--~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fq------a~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw   97 (933)
T KOG2114|consen   27 AISC--CSSSTGSVVIGTADGRVVILNSS-FQLIRGFQ------AYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIW   97 (933)
T ss_pred             ceeE--EcCCCceEEEeeccccEEEeccc-ceeeehhe------ecchhhhhHhhcccCceEEEEEeecCCCCceEEEEe
Confidence            4554  46788899999999999888643 22223332      23334 44444444446788776654     58999


Q ss_pred             eCC----Cc---cE--Eeecc-----cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC----CceeEEEeeccCCceeEE
Q psy17902        218 SSS----LE---HL--HTFTG-----HKAPITGLAISFECDTLYSSSNDRSIKVWNIE----DRAYVETLFGHQSAITSL  279 (454)
Q Consensus       218 ~~~----~~---~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~  279 (454)
                      +++    +.   ++  +.+..     ...++.+++.+.+-+.+++|-.+|.|..+.-+    .+...........+|+.+
T Consensus        98 ~lek~~~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL  177 (933)
T KOG2114|consen   98 DLEKVDKNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGL  177 (933)
T ss_pred             cccccCCCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceee
Confidence            981    22   12  11222     35678899999999999999999999988532    122222222356789999


Q ss_pred             EeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCE-EEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        280 DILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQ-FITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       280 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      .+..++..++-+..-..|.+|.+....+.  ....|...+.|..+.++.. |++++ +..+.+|+.....+...+...+
T Consensus       178 ~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g~  255 (933)
T KOG2114|consen  178 ALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVGE  255 (933)
T ss_pred             EEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCCC
Confidence            99988866222334557999998865522  4677777888888887766 55554 5569999988777777766443

>KOG0882|consensus

Probab=98.76  E-value=9.1e-08  Score=84.31  Aligned_cols=245  Identities=14%  Similarity=0.128  Sum_probs=158.7

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC--cEEEEe
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN--ELVASG  208 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~  208 (454)
                      .+..++.  |.+.|.+++.+-++-++.|++. |..++++|+++...+..+.+..     .....++..++..  ..|+++
T Consensus        45 fVKhFra--HL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~-----lPg~a~wv~skGd~~s~IAVs  117 (558)
T KOG0882|consen   45 FVKHFRA--HLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVD-----LPGFAEWVTSKGDKISLIAVS  117 (558)
T ss_pred             ehhhhHH--HHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhccccc-----CCCceEEecCCCCeeeeEEee
Confidence            3455666  9999999999999999999887 9999999999877665544311     1122222223221  134433


Q ss_pred             -cCCCcEEEEeC--CC-ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC------ceeE---------EEe
Q psy17902        209 -DNNSNIKLWSS--SL-EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED------RAYV---------ETL  269 (454)
Q Consensus       209 -~~dg~v~vw~~--~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~------~~~~---------~~~  269 (454)
                       -.+|.+.|+|-  .. +....-.-|..+|.++.+++.+..+++....|.|..|....      .+..         ..+
T Consensus       118 ~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f  197 (558)
T KOG0882|consen  118 LFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGF  197 (558)
T ss_pred             cccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcc
Confidence             34689999997  33 33444456999999999999999999999999999999873      1111         111


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc---
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV---  346 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---  346 (454)
                      ........++.|+|++..+.+-+.|..|+++++++++.+.......... ..-+..          .+.+-.+.-+.   
T Consensus       198 ~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~-~~q~ks----------~y~l~~VelgRRma  266 (558)
T KOG0882|consen  198 PKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDA-QYQPKS----------PYGLMHVELGRRMA  266 (558)
T ss_pred             cccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhh-hhcccc----------ccccceeehhhhhh
Confidence            2234567899999999999999999999999999988762211110000 000000          01111110010   


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      ....+.. +       ....-+.+.|...|++|+-|+.=| |++.++.++...+.+.
T Consensus       267 verelek-~-------~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g  314 (558)
T KOG0882|consen  267 VERELEK-H-------GSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG  314 (558)
T ss_pred             HHhhHhh-h-------cCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence            0011111 0       111256688999999999999887 9999999987777654

>KOG1832|consensus

Probab=98.75  E-value=9.4e-09  Score=97.72  Aligned_cols=213  Identities=15%  Similarity=0.203  Sum_probs=151.7

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCC-
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIED-  262 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~-  262 (454)
                      +.+....+|++|+.+.++|++|+..|.|++|++ ++.......+|..+|+-+.-+.+|..+++.+.-.  -..+|++.+ 
T Consensus      1098 rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1098 RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST 1177 (1516)
T ss_pred             hccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc
Confidence            357778999999999999999999999999999 8888889999999999999888998877665433  467899864 


Q ss_pred             ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-E-Ec---cccCCeEEEEecCCCEEEEEeCCCCE
Q psy17902        263 RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-V-FN---GHSRGIDMTRRVNDQQFITCGEDGTL  337 (454)
Q Consensus       263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~-~~---~~~~~i~~~~~~~~~~l~~~~~dg~i  337 (454)
                      +...++|.    .-.++.|+.....-+.|+......+||+.++..+ . +.   +....-+++.|++.+.|+.  .||  
T Consensus      1178 ~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl--ndG-- 1249 (1516)
T KOG1832|consen 1178 GGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL--NDG-- 1249 (1516)
T ss_pred             cCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe--eCc--
Confidence            23334443    2356788765544445555567899999998766 2 22   1222235666666665554  344  


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      .+||++..+.++.+.....          -..=.|+|+|.-++.-+     .|||+++.+.+..+....    -..+.|+
T Consensus      1250 vLWDvR~~~aIh~FD~ft~----------~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld----qc~VtFN 1310 (1516)
T KOG1832|consen 1250 VLWDVRIPEAIHRFDQFTD----------YGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD----QCAVTFN 1310 (1516)
T ss_pred             eeeeeccHHHHhhhhhhee----------cccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc----ceEEEec
Confidence            4799999888887764331          12235899999887765     489999888777665422    3457788


Q ss_pred             CCCCEEEEE
Q psy17902        418 SDHKHLVAG  426 (454)
Q Consensus       418 ~d~~~l~~~  426 (454)
                      ..|..+++.
T Consensus      1311 stG~VmYa~ 1319 (1516)
T KOG1832|consen 1311 STGDVMYAM 1319 (1516)
T ss_pred             cCccchhhh
Confidence            877776654

>KOG2114|consensus

Probab=98.74  E-value=4.5e-06  Score=79.90  Aligned_cols=198  Identities=14%  Similarity=0.175  Sum_probs=129.7

Q ss_pred             EEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCC-eEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCc------e
Q psy17902        197 AVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAP-ITGLAISFECDTLYSSSNDR-----SIKVWNIEDR------A  264 (454)
Q Consensus       197 ~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~------~  264 (454)
                      +|++++..++.|+.+|.|.+++-..+.+..++.+... |..+.......+|++.+.|+     .|+||+++..      .
T Consensus        30 c~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~  109 (933)
T KOG2114|consen   30 CCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQ  109 (933)
T ss_pred             EEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcc
Confidence            4678888999999999999999877777888888777 44444343446888877665     4899998642      2


Q ss_pred             eE--EEeec-----cCCceeEEEeecCCCEEEEeeCCCcEEEeeccC----C-eEEEEccccCCeEEEEecC-CCEEEEE
Q psy17902        265 YV--ETLFG-----HQSAITSLDILAKNRVISSGGTDKSVRVWKIQE----E-SQLVFNGHSRGIDMTRRVN-DQQFITC  331 (454)
Q Consensus       265 ~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~----~-~~~~~~~~~~~i~~~~~~~-~~~l~~~  331 (454)
                      ++  ..+.+     ...++.+++.+.+-+.+++|-.+|.|..+.-.-    + +.........+|+.+.+.. +..++-.
T Consensus       110 c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv  189 (933)
T KOG2114|consen  110 CLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFV  189 (933)
T ss_pred             eeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEE
Confidence            33  12222     356788999999989999999999998885321    1 1112233345677666654 3442334


Q ss_pred             eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        332 GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      .....|.+|.+....+.......+        ...+.|..+++....|++++.. .|.+|+.....+-..+.
T Consensus       190 ~Tt~~V~~y~l~gr~p~~~~ld~~--------G~~lnCss~~~~t~qfIca~~e-~l~fY~sd~~~~cfaf~  252 (933)
T KOG2114|consen  190 ATTEQVMLYSLSGRTPSLKVLDNN--------GISLNCSSFSDGTYQFICAGSE-FLYFYDSDGRGPCFAFE  252 (933)
T ss_pred             EecceeEEEEecCCCcceeeeccC--------CccceeeecCCCCccEEEecCc-eEEEEcCCCcceeeeec
Confidence            445569999987444333323333        3338888888876645555544 59999987544444443

>KOG3617|consensus

Probab=98.70  E-value=3.4e-07  Score=87.00  Aligned_cols=108  Identities=16%  Similarity=0.113  Sum_probs=87.3

Q ss_pred             EEEEeCCCcEEEEecC----CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        195 ALAVANNNELVASGDN----NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       195 ~~~~~~~~~~l~~~~~----dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      -..|+|...++++++.    .|.|.||--++.+..... .+-.+++++|+|..-.|+.|=.-|.+.+|...+.+.-....
T Consensus        20 i~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt-~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~   98 (1416)
T KOG3617|consen   20 ISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVT-YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVE   98 (1416)
T ss_pred             ccccCCCCceeEEEEecCCCCceEEEEecCCCCCcccc-cceehhhhccChHHHHHhhccccceeEEEecCCceeeeecc
Confidence            3568888888887754    588999876666443322 22345679999998888888889999999998877766667


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      .|..+|..+.|+++|+.++++..-|.|.+|.+.
T Consensus        99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d  131 (1416)
T KOG3617|consen   99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD  131 (1416)
T ss_pred             CCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence            899999999999999999999999999999876

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.67  E-value=9.9e-06  Score=75.48  Aligned_cols=219  Identities=15%  Similarity=0.125  Sum_probs=115.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe-C
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS-S  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~-~  219 (454)
                      ..-....+.++|+|+++++ +.+|...|+........           ..+.-...+|.+.++ +|+-..++.|.|+. +
T Consensus        31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k-----------~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~   97 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNK-----------AFGSGLSFVWSSRNR-YAVLESSSTIKIYKNF   97 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEE-----------EEEE-SEEEE-TSSE-EEEE-TTS-EEEEETT
T ss_pred             CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccc-----------ccCceeEEEEecCcc-EEEEECCCeEEEEEcC
Confidence            5556889999999999999 55788888874332221           223455688988665 56666578899964 4


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      .......+.. ...+..|-.   |..|+..+.+ .|.+||+.+++.+..+...  +|..+.|++++.+++..+.+ .+.|
T Consensus        98 ~~~~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~i  169 (443)
T PF04053_consen   98 KNEVVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYI  169 (443)
T ss_dssp             EE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEE
T ss_pred             ccccceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEE
Confidence            3333223321 123343332   7777777654 7999999999999888533  48999999999999888755 6888


Q ss_pred             eeccCC------------eEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        300 WKIQEE------------SQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       300 ~d~~~~------------~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      ++....            .......-...|....|..+ .|+-.+.. .|+.  +..+........          ..++
T Consensus       170 l~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~fiYtT~~-~lkY--l~~Ge~~~i~~l----------d~~~  235 (443)
T PF04053_consen  170 LKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-CFIYTTSN-HLKY--LVNGETGIIAHL----------DKPL  235 (443)
T ss_dssp             EEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-EEEEE-TT-EEEE--EETTEEEEEEE-----------SS--
T ss_pred             EEecchhcccccccCchhceEEEEEecceeEEEEEEcC-EEEEEcCC-eEEE--EEcCCcceEEEc----------CCce
Confidence            776544            22233332445555556555 34333333 5555  333322211111          1125


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      .-+.+.|..+.+.....|+.|..+.+.
T Consensus       236 yllgy~~~~~~ly~~Dr~~~v~~~~ld  262 (443)
T PF04053_consen  236 YLLGYLPKENRLYLIDRDGNVISYELD  262 (443)
T ss_dssp             EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred             EEEEEEccCCEEEEEECCCCEEEEEEC
Confidence            556677766777778888888877764

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>KOG1920|consensus

Probab=98.64  E-value=1.1e-05  Score=80.33  Aligned_cols=197  Identities=17%  Similarity=0.133  Sum_probs=129.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -.+.|.++.|..+++-++.+...|.|.+-|.++......-       .-...|.+++|+||...++..+..+++.+-+-+
T Consensus        67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg-------~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~  139 (1265)
T KOG1920|consen   67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVG-------NVDNGISAASWSPDEELLALITGRQTLLFMTKD  139 (1265)
T ss_pred             CCcceEEEEEecccceEEEEecCCcEEEEcccccceeeee-------eccCceEEEeecCCCcEEEEEeCCcEEEEEecc
Confidence            4568999999999999999999999999988775443222       245589999999999999999887877665421


Q ss_pred             Cc-----cE-------------------EeecccC---------------------CCeEEEEEcCCCCEEEEEe-----
Q psy17902        221 LE-----HL-------------------HTFTGHK---------------------APITGLAISFECDTLYSSS-----  250 (454)
Q Consensus       221 ~~-----~~-------------------~~~~~~~---------------------~~v~~~~~~~~~~~l~~~~-----  250 (454)
                      ..     .+                   ..|.+..                     +.=++|+|--||.++++..     
T Consensus       140 f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~  219 (1265)
T KOG1920|consen  140 FEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESET  219 (1265)
T ss_pred             ccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccC
Confidence            11     11                   1122111                     1123589999999998832     


Q ss_pred             CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee---CCCcEEEeeccCCeEE----EEccccCCeEEEEec
Q psy17902        251 NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG---TDKSVRVWKIQEESQL----VFNGHSRGIDMTRRV  323 (454)
Q Consensus       251 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~  323 (454)
                      ....|+|||-+ |..-..-....+.=.+++|-|.|..+++-.   .|+.|.+|.-..-..-    .+......+..+.|.
T Consensus       220 ~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wn  298 (1265)
T KOG1920|consen  220 GTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWN  298 (1265)
T ss_pred             CceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeec
Confidence            23789999987 443222222334446899999999888753   4557888875442221    233333335556665


Q ss_pred             -CCCEEEE---EeCCCCEEEEecCCC
Q psy17902        324 -NDQQFIT---CGEDGTLSLWSILKK  345 (454)
Q Consensus       324 -~~~~l~~---~~~dg~i~iwd~~~~  345 (454)
                       ++..|++   ......|++|-+.+.
T Consensus       299 s~sdiLAv~~~~~e~~~v~lwt~~Ny  324 (1265)
T KOG1920|consen  299 SNSDILAVVTSNLENSLVQLWTTGNY  324 (1265)
T ss_pred             CCCCceeeeecccccceEEEEEecCe
Confidence             4555554   334445999988764

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.60  E-value=6e-05  Score=71.57  Aligned_cols=260  Identities=11%  Similarity=0.069  Sum_probs=142.9

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCC-------CCceE-----------------EEEEe---CCCcEEEEe
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS-------YPPIL-----------------ALAVA---NNNELVASG  208 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~v~-----------------~~~~~---~~~~~l~~~  208 (454)
                      .+.+|+..|.|+|+-+.+...+..++........       +..|.                 .+++.   .||+||+.-
T Consensus        68 ~f~SgG~sG~~~v~G~PSmr~l~~ipvf~~~~~~G~G~~~esk~~l~~~~~~~~~~~gD~HHp~~s~t~g~ydGr~~fin  147 (635)
T PRK02888         68 GFWSGGHSGEVRILGLPSMRELMRIPVFNRDSATGWGITNESKKVLGEGARGGKYLNGDTHHPHMSFTDGTYDGRYLFIN  147 (635)
T ss_pred             EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHhhccccCCcccCCCcCCCcccccCCccceeEEEEe
Confidence            3667888899999988887776655532221000       00000                 11121   267788776


Q ss_pred             cC-CCcEEEEeC---CCccEEeec-------------ccCCCeEE-----EEEcCCCCEEEEE-eCCCcEEEEeCCCcee
Q psy17902        209 DN-NSNIKLWSS---SLEHLHTFT-------------GHKAPITG-----LAISFECDTLYSS-SNDRSIKVWNIEDRAY  265 (454)
Q Consensus       209 ~~-dg~v~vw~~---~~~~~~~~~-------------~~~~~v~~-----~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~  265 (454)
                      .. +..|...++   ....+..+.             .++..|.+     +=+.|+|+.+... -..+.+.+.|..+.+.
T Consensus       148 dk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vSvID~etmeV  227 (635)
T PRK02888        148 DKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFTAVDAETMEV  227 (635)
T ss_pred             cCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEEEEECccceE
Confidence            64 455555555   233332221             11222221     2223455444322 2345677778887766


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeC----------------------------------------CCcEEEeeccC-
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGT----------------------------------------DKSVRVWKIQE-  304 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------------------------------dg~i~i~d~~~-  304 (454)
                      ...+.-- +....+.++++|+++++.+.                                        ++.|.+.|.++ 
T Consensus       228 ~~qV~Vd-gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~V~gn~V~VID~~t~  306 (635)
T PRK02888        228 AWQVMVD-GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKTIGGSKVPVVDGRKA  306 (635)
T ss_pred             EEEEEeC-CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEEECCCEEEEEECCcc
Confidence            6555432 23456778888888777652                                        23456666655 


Q ss_pred             ----CeEE-EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCcc------------ceeeecccCCCCCCCCCCc
Q psy17902        305 ----ESQL-VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKVP------------THTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       305 ----~~~~-~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~~~~  366 (454)
                          ...+ .+.....+-.+...+++.++++++ .+.+|.|+|+.+.+.            ........+          
T Consensus       307 ~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevGlG----------  376 (635)
T PRK02888        307 ANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELGLG----------  376 (635)
T ss_pred             ccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccCCC----------
Confidence                2222 222222333444556777766555 689999999987653            222222111          


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcCC----------CceeeEeccCC---CceeeeEEEEcCCCCEEEEE
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKITP----------KRTLEFLQDIP---LSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~~~---~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ....+|.++|+...+-..|..|..|++..          ...+..+.-..   |......=.-.|||++|++.
T Consensus       377 PLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~  449 (635)
T PRK02888        377 PLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSL  449 (635)
T ss_pred             cceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEc
Confidence            45578899998888888899999999876          22333333211   11111122347899999887

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=98.57  E-value=0.00011  Score=70.55  Aligned_cols=261  Identities=13%  Similarity=0.104  Sum_probs=148.4

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce-EEEEEeCCCcEEEEec---------CCCcEEEEeC-CCcc
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI-LALAVANNNELVASGD---------NNSNIKLWSS-SLEH  223 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~---------~dg~v~vw~~-~~~~  223 (454)
                      ..++.++.+|.|..+|..+++............ ....+ ....+. + ..++.++         .+|.|..+|. +++.
T Consensus       111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~-~~~~i~ssP~v~-~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~  187 (488)
T cd00216         111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVP-PGYTMTGAPTIV-K-KLVIIGSSGAEFFACGVRGALRAYDVETGKL  187 (488)
T ss_pred             CeEEEecCCCeEEEEECCCCCEeeeecCCCCcC-cceEecCCCEEE-C-CEEEEeccccccccCCCCcEEEEEECCCCce
Confidence            678888899999999999999887765422100 00001 111122 2 3444543         3578888898 6777


Q ss_pred             EEeecccCC--------------------Ce-EEEEEcCCCCEEEEEeCCC------------------cEEEEeCCCce
Q psy17902        224 LHTFTGHKA--------------------PI-TGLAISFECDTLYSSSNDR------------------SIKVWNIEDRA  264 (454)
Q Consensus       224 ~~~~~~~~~--------------------~v-~~~~~~~~~~~l~~~~~dg------------------~i~iwd~~~~~  264 (454)
                      +..+.....                    .+ .+.++.+.+..++.++.++                  .|.-+|+.+++
T Consensus       188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~  267 (488)
T cd00216         188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGK  267 (488)
T ss_pred             eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCC
Confidence            766543211                    01 1234444567788887665                  79999999999


Q ss_pred             eEEEeeccCCce------eEEEee----cCCC---EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEE
Q psy17902        265 YVETLFGHQSAI------TSLDIL----AKNR---VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFIT  330 (454)
Q Consensus       265 ~~~~~~~~~~~v------~~~~~~----~~~~---~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~  330 (454)
                      .+..+..-....      ....+.    -++.   .++.++.+|.+..+|..+++.+ ........+   ...+ +.++.
T Consensus       268 ~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~~~~---~~~~-~~vyv  343 (488)
T cd00216         268 VKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVEQPM---AYDP-GLVYL  343 (488)
T ss_pred             EEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeecccc---ccCC-ceEEE
Confidence            887764211111      011111    1232   6778889999999999999887 222110111   1111 22322


Q ss_pred             E------------------eCCCCEEEEecCCCccceeeecccCCCCCC-CCCCcEEEEEEecCCCEEEEecCCCcEEEE
Q psy17902        331 C------------------GEDGTLSLWSILKKVPTHTIPVAHGYDSSS-SEPNWITSVACLHNSDLVASGSYDGCVKLW  391 (454)
Q Consensus       331 ~------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw  391 (454)
                      +                  ..+|.|.-+|+.+++.+............. ........+.  -.+.+|++++.||.|+.+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~al  421 (488)
T cd00216         344 GAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAF  421 (488)
T ss_pred             ccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEE
Confidence            2                  246788899999998888776541110000 0000011122  245689999999999999


Q ss_pred             EcCCCceeeEeccCCCceeeeEEEEcCCCCEEEE
Q psy17902        392 KITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVA  425 (454)
Q Consensus       392 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~  425 (454)
                      |..+|+.+-.... .......-+.|..+|+..+.
T Consensus       422 d~~tG~~lW~~~~-~~~~~a~P~~~~~~g~~yv~  454 (488)
T cd00216         422 DATTGKELWKFRT-PSGIQATPMTYEVNGKQYVG  454 (488)
T ss_pred             ECCCCceeeEEEC-CCCceEcCEEEEeCCEEEEE
Confidence            9999988877653 12212222445556654433

The alignment model contains an 8-bladed beta-propeller.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=98.55  E-value=0.00012  Score=64.26  Aligned_cols=265  Identities=12%  Similarity=0.116  Sum_probs=157.1

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCcEEEEeC-CCccEEee--cc-
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSNIKLWSS-SLEHLHTF--TG-  229 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~v~vw~~-~~~~~~~~--~~-  229 (454)
                      +.+.++|.++++.+..+..     +   -.-.+..+|+++.+++++          ..-.|.+||. +......+  .. 
T Consensus        17 ~rv~viD~d~~k~lGmi~~-----g---~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k   88 (342)
T PF06433_consen   17 SRVYVIDADSGKLLGMIDT-----G---FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPK   88 (342)
T ss_dssp             EEEEEEETTTTEEEEEEEE-----E---SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS
T ss_pred             ceEEEEECCCCcEEEEeec-----c---cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCc
Confidence            4799999998887766553     2   233466899999888753          2347899998 44443322  21 


Q ss_pred             cC----CCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeec
Q psy17902        230 HK----APITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKI  302 (454)
Q Consensus       230 ~~----~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~  302 (454)
                      |.    .....++++.+++++++...  -..|.|.|+..++.+..+.. .+.   ....|.+ .-+.+-|.||.+....+
T Consensus        89 ~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~-PGC---~~iyP~~~~~F~~lC~DGsl~~v~L  164 (342)
T PF06433_consen   89 PRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT-PGC---WLIYPSGNRGFSMLCGDGSLLTVTL  164 (342)
T ss_dssp             -B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG-TSE---EEEEEEETTEEEEEETTSCEEEEEE
T ss_pred             chheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC-CCE---EEEEecCCCceEEEecCCceEEEEE
Confidence            11    12234678889988887643  45789999999988877642 222   2222322 45778889999998888


Q ss_pred             cC-CeEE-----EEccccCCe--EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecc--cCC-CCCCCCCCcEEEEE
Q psy17902        303 QE-ESQL-----VFNGHSRGI--DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVA--HGY-DSSSSEPNWITSVA  371 (454)
Q Consensus       303 ~~-~~~~-----~~~~~~~~i--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~-~~~~~~~~~i~~~~  371 (454)
                      .. ++..     .+.....++  .......++.++-.+..|.|+-.|+.........+..  ... ......++.-.-++
T Consensus       165 d~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A  244 (342)
T PF06433_consen  165 DADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIA  244 (342)
T ss_dssp             TSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EE
T ss_pred             CCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeee
Confidence            73 3333     111111111  1222234566777889999999888766433222111  000 00001122234477


Q ss_pred             EecCCCEEEEecC---CC-------cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE-EEEEecCCCceeeeeeeC
Q psy17902        372 CLHNSDLVASGSY---DG-------CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH-LVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       372 ~s~~~~~l~~~~~---dg-------~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~-l~~~~~~d~~i~~W~~~~  440 (454)
                      +++..+.|++--.   +|       .|.+||+.+++.+..+.   ...++.+|..+.+.+- |++....++.|.+||..+
T Consensus       245 ~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~---l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~t  321 (342)
T PF06433_consen  245 YHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP---LEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAAT  321 (342)
T ss_dssp             EETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEE---EEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT
T ss_pred             eccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEe---CCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcC
Confidence            8876655444221   22       48888999999888887   4567889999998874 444445689999999887


Q ss_pred             CCe
Q psy17902        441 GVK  443 (454)
Q Consensus       441 ~~~  443 (454)
                      +..
T Consensus       322 Gk~  324 (342)
T PF06433_consen  322 GKL  324 (342)
T ss_dssp             --E
T ss_pred             CcE
Confidence            743

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.54  E-value=8.5e-05  Score=68.40  Aligned_cols=225  Identities=12%  Similarity=0.129  Sum_probs=131.8

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeC--C--Cc----------------------c------------------EEee
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSS--S--LE----------------------H------------------LHTF  227 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~--~~----------------------~------------------~~~~  227 (454)
                      .|+.+.|+++..-|++|...|.|.||.+  +  ..                      .                  ...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            5889999999889999999999999875  1  00                      0                  1112


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--c------cCCceeEEEeec-----CC---CEEEEe
Q psy17902        228 TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--G------HQSAITSLDILA-----KN---RVISSG  291 (454)
Q Consensus       228 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~------~~~~v~~~~~~~-----~~---~~l~~~  291 (454)
                      ....++|++++.+ |=.++++|..+|.+.|.|++....+..-.  .      ....|+++.|..     |+   -++++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            2346789999997 55699999999999999999887765421  1      234678888862     22   478889


Q ss_pred             eCCCcEEEeeccC---Ce-EEE----EccccCCeEEEE-ec------------------C---CCEEEEEeCCCCEEEEe
Q psy17902        292 GTDKSVRVWKIQE---ES-QLV----FNGHSRGIDMTR-RV------------------N---DQQFITCGEDGTLSLWS  341 (454)
Q Consensus       292 ~~dg~i~i~d~~~---~~-~~~----~~~~~~~i~~~~-~~------------------~---~~~l~~~~~dg~i~iwd  341 (454)
                      ...|.+.+|.+.-   +. ...    ...+...+..+. +.                  .   -..++....+..++++.
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~  241 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK  241 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence            9999999998752   11 111    112223332222 21                  0   12355556677899999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEe-----cCCCEEEEecCCCcEEEEEcCCCceeeEeccCC--CceeeeEE
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACL-----HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP--LSGVINSL  414 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-----~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~v~~l  414 (454)
                      ..+.+..+......         .....+.+-     ..+..|++-..+|.|++|.+..-+.+..+....  ....+...
T Consensus       242 ~~~~k~~~K~~~~~---------~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s  312 (395)
T PF08596_consen  242 PPKSKGAHKSFDDP---------FLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS  312 (395)
T ss_dssp             TT---EEEEE-SS----------EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred             CCCCcccceeeccc---------cccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence            98877666554211         113344442     356688888999999999998887776665421  23446678


Q ss_pred             EEcCCCCEEEEE
Q psy17902        415 VFTSDHKHLVAG  426 (454)
Q Consensus       415 ~~s~d~~~l~~~  426 (454)
                      +|+++|..++..
T Consensus       313 sis~~Gdi~~~~  324 (395)
T PF08596_consen  313 SISRNGDIFYWT  324 (395)
T ss_dssp             EE-TTS-EEEE-
T ss_pred             EECCCCCEEEEe
Confidence            899999988776

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.53  E-value=7e-05  Score=73.81  Aligned_cols=141  Identities=11%  Similarity=0.138  Sum_probs=93.4

Q ss_pred             CCcEEEEe-cCCCcEEEEeC-CCccEEeecccCCC-eEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCce--eEEE--
Q psy17902        201 NNELVASG-DNNSNIKLWSS-SLEHLHTFTGHKAP-ITGLAISF-----ECDTLYSSSNDRSIKVWNIEDRA--YVET--  268 (454)
Q Consensus       201 ~~~~l~~~-~~dg~v~vw~~-~~~~~~~~~~~~~~-v~~~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~--~~~~--  268 (454)
                      +.++|+.- .....|+-.|+ .++.+..+..|... |..++-..     +....+.|-.+..+..||.+-..  ++..  
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~  571 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQS  571 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccc
Confidence            44444443 34577888888 77888888777644 55443221     13356677778889999987532  2311  


Q ss_pred             -eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE-EEEccccCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902        269 -LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ-LVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       269 -~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~  342 (454)
                       ........+|++-+.+| +||+|+.+|.||+||--.... ..+.+...+|..+....++..+.++.+..|.+++.
T Consensus       572 k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t  646 (794)
T PF08553_consen  572 KQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDT  646 (794)
T ss_pred             cccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEE
Confidence             11344567788776555 678899999999999432221 15667778888888877666666777788888886

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>KOG3621|consensus

Probab=98.52  E-value=1.7e-06  Score=81.02  Aligned_cols=116  Identities=11%  Similarity=0.139  Sum_probs=92.2

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +...|.--+++..+.+++.|+..|.+++|+-.+.....++.  -.+.+..+..+++..++|+|+..|.|.++-++....-
T Consensus        32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~  111 (726)
T KOG3621|consen   32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR  111 (726)
T ss_pred             CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence            34456666777889999999999999999986655554443  5567777888988889999999999999988764221


Q ss_pred             -----EEe-eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902        267 -----ETL-FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       267 -----~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~  304 (454)
                           ... ..|...|++++|++++..+++|...|.|..-.+.+
T Consensus       112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence                 111 24788999999999999999999999999888877

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.50  E-value=2.5e-05  Score=71.85  Aligned_cols=243  Identities=12%  Similarity=0.139  Sum_probs=131.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec------ccCC-------------------------------cccC
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC------SSPF-------------------------------VKTD  186 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~------~~~~-------------------------------~~~~  186 (454)
                      .|+++.|+++..-|++|...|.|.||.....+...      ....                               ....
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            48999999999999999999999999765432221      0000                               0000


Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEE-e--ecc------cCCCeEEEEEcC-----CC---CEEEEE
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLH-T--FTG------HKAPITGLAISF-----EC---DTLYSS  249 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~-~--~~~------~~~~v~~~~~~~-----~~---~~l~~~  249 (454)
                      ....++|++++.| |=-++|.|..+|.+.|.|+.+..+. .  +..      ....|+++.|..     |+   -.|++|
T Consensus        83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG  161 (395)
T PF08596_consen   83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG  161 (395)
T ss_dssp             ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred             eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence            2235789999997 4459999999999999999654432 2  111      334688888862     22   478899


Q ss_pred             eCCCcEEEEeCCC---ceeE----EEeeccCCceeEEEee-cC-----------------C---CEEEEeeCCCcEEEee
Q psy17902        250 SNDRSIKVWNIED---RAYV----ETLFGHQSAITSLDIL-AK-----------------N---RVISSGGTDKSVRVWK  301 (454)
Q Consensus       250 ~~dg~i~iwd~~~---~~~~----~~~~~~~~~v~~~~~~-~~-----------------~---~~l~~~~~dg~i~i~d  301 (454)
                      +..|.+.+|.+--   +...    .....+.++|..|... .+                 +   +-++....+..++++.
T Consensus       162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~  241 (395)
T PF08596_consen  162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK  241 (395)
T ss_dssp             ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred             eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence            9999999998741   2221    1222455666655532 11                 1   1233344567899999


Q ss_pred             ccCCeEE-EEccccCCeEEEEe------cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        302 IQEESQL-VFNGHSRGIDMTRR------VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       302 ~~~~~~~-~~~~~~~~i~~~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      ..+.+.. ...........+.+      ..+..|++-..+|.|++|.+..-+.+.........     +...+....+++
T Consensus       242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~-----d~~~~~~ssis~  316 (395)
T PF08596_consen  242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPL-----DSRRLSSSSISR  316 (395)
T ss_dssp             TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS--------HHHHTT-EE-T
T ss_pred             CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcc-----ccccccccEECC
Confidence            8877665 22222112222222      23556778889999999999998888887764321     122245567788


Q ss_pred             CCCEEEEecCCCcEEEEEc
Q psy17902        375 NSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~  393 (454)
                      +|+.++-.+.. .+.++.+
T Consensus       317 ~Gdi~~~~gps-E~~l~sv  334 (395)
T PF08596_consen  317 NGDIFYWTGPS-EIQLFSV  334 (395)
T ss_dssp             TS-EEEE-SSS-EEEEEEE
T ss_pred             CCCEEEEeCcc-cEEEEEE
Confidence            99977666543 3555544

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.48  E-value=0.00076  Score=62.78  Aligned_cols=71  Identities=18%  Similarity=0.235  Sum_probs=52.7

Q ss_pred             cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        314 SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       314 ~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ...+.+...+....|+.|+.||+|.+||...+.......           .-..+.++|+|+|.+|++|+..|.+.+||+
T Consensus       260 s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~ka-----------~~~P~~iaWHp~gai~~V~s~qGelQ~FD~  328 (545)
T PF11768_consen  260 SQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAKA-----------EFIPTLIAWHPDGAIFVVGSEQGELQCFDM  328 (545)
T ss_pred             CcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeeee-----------cccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence            344455556677889999999999999987664333211           112788999999999999999999999997


Q ss_pred             CC
Q psy17902        394 TP  395 (454)
Q Consensus       394 ~~  395 (454)
                      .-
T Consensus       329 AL  330 (545)
T PF11768_consen  329 AL  330 (545)
T ss_pred             ec
Confidence            53

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=98.46  E-value=0.00037  Score=61.85  Aligned_cols=224  Identities=14%  Similarity=0.136  Sum_probs=130.1

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-CccEEe----
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LEHLHT----  226 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~~~~----  226 (454)
                      ..++.|+.|+.+| +.++++..........       +...|..+...++-+.|++-+ |+.+.++++. ......    
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-------~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~   75 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-------KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPL   75 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe-------ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccc
Confidence            3578999999998 8899883222222221       333599999999877766665 4999999982 111110    


Q ss_pred             ----------ecccCCCeEEEE--EcCCCCEEEEEeCCCcEEEEeCCCc-----eeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        227 ----------FTGHKAPITGLA--ISFECDTLYSSSNDRSIKVWNIEDR-----AYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       227 ----------~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                                .......+..++  -.+.+...++......|.+|.....     .....+. ....+.+++|.  ++.|+
T Consensus        76 ~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~  152 (275)
T PF00780_consen   76 AFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKIC  152 (275)
T ss_pred             cccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEE
Confidence                      111223344444  1123334444444568888887653     3444443 45778899998  56677


Q ss_pred             EeeCCCcEEEeeccCCeEEEEccc-------------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce--eeecc
Q psy17902        290 SGGTDKSVRVWKIQEESQLVFNGH-------------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH--TIPVA  354 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~~~~~~-------------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~  354 (454)
                      .|..+ ...+.|+.++....+...             ..++.....+++.+|++ . +..-.+.|. .|.+..  .+...
T Consensus       153 v~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~-~~~g~fv~~-~G~~~r~~~i~W~  228 (275)
T PF00780_consen  153 VGTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-Y-DNIGVFVNK-NGEPSRKSTIQWS  228 (275)
T ss_pred             EEeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-e-cceEEEEcC-CCCcCcccEEEcC
Confidence            67654 478889987655533211             12344444444555543 2 333333343 343333  22221


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                                ..+.++++.  ..+|++.+.+ .|.||++.+++.++.+..
T Consensus       229 ----------~~p~~~~~~--~pyli~~~~~-~iEV~~~~~~~lvQ~i~~  265 (275)
T PF00780_consen  229 ----------SAPQSVAYS--SPYLIAFSSN-SIEVRSLETGELVQTIPL  265 (275)
T ss_pred             ----------CchhEEEEE--CCEEEEECCC-EEEEEECcCCcEEEEEEC
Confidence                      125566664  3477777665 499999999988888764

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.42  E-value=5.5e-06  Score=76.43  Aligned_cols=73  Identities=14%  Similarity=0.261  Sum_probs=62.0

Q ss_pred             CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        140 PHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       140 ~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      +....|.|++++|+...|+.|+.||.|.+||...+..... .       ..-.++.++|+|+|.++++|+..|.+.+||+
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-k-------a~~~P~~iaWHp~gai~~V~s~qGelQ~FD~  328 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-K-------AEFIPTLIAWHPDGAIFVVGSEQGELQCFDM  328 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-e-------ecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence            4888999999999999999999999999999876543322 1       2235788999999999999999999999998


Q ss_pred             C
Q psy17902        220 S  220 (454)
Q Consensus       220 ~  220 (454)
                      .
T Consensus       329 A  329 (545)
T PF11768_consen  329 A  329 (545)
T ss_pred             e
Confidence            3

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.37  E-value=0.00037  Score=59.60  Aligned_cols=201  Identities=13%  Similarity=0.097  Sum_probs=114.6

Q ss_pred             CCCceEEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeeccc-CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--
Q psy17902        189 SYPPILALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGH-KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--  264 (454)
Q Consensus       189 ~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--  264 (454)
                      -...+..|+|+|+ +.++++....+.|..++.+++.+..+.-. .+..-.|++..++.++++.-.++.+.++++....  
T Consensus        20 ~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~   99 (248)
T PF06977_consen   20 ILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS   99 (248)
T ss_dssp             --S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred             ccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence            3346999999997 55677777788998889888888776533 3678899998777666666568999999884321  


Q ss_pred             ----eEEEee-----ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---CeEE---EEcc------ccCCeEEEEec
Q psy17902        265 ----YVETLF-----GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---ESQL---VFNG------HSRGIDMTRRV  323 (454)
Q Consensus       265 ----~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~---~~~~------~~~~i~~~~~~  323 (454)
                          ....+.     .+...+-.++|++.++.|+.+-...-..+|.+..   ....   ....      ....++.+.+.
T Consensus       100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~  179 (248)
T PF06977_consen  100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYD  179 (248)
T ss_dssp             --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EEEEE
T ss_pred             cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccceEEc
Confidence                111221     2456689999999988888887777777777764   2221   1111      11223444443


Q ss_pred             C--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEE
Q psy17902        324 N--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW  391 (454)
Q Consensus       324 ~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iw  391 (454)
                      +  +.+++.......|..+| ..++++..+....+.......-...-.|+|.++|++.+++ .-+..++|
T Consensus       180 p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvs-EpNlfy~f  247 (248)
T PF06977_consen  180 PRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVS-EPNLFYRF  247 (248)
T ss_dssp             TTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEE-TTTEEEEE
T ss_pred             CCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEc-CCceEEEe
Confidence            3  44566666788888899 6777777777665432222223347889999999755554 44455544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>KOG1008|consensus

Probab=98.37  E-value=1.9e-07  Score=86.07  Aligned_cols=197  Identities=21%  Similarity=0.298  Sum_probs=125.2

Q ss_pred             CceEEEEEeCC--CcEEEEecCCCcEEEEeCCC---ccEEeecccCCCeEEEEEcC-CCCEEEEEe----CCCcEEEEeC
Q psy17902        191 PPILALAVANN--NELVASGDNNSNIKLWSSSL---EHLHTFTGHKAPITGLAISF-ECDTLYSSS----NDRSIKVWNI  260 (454)
Q Consensus       191 ~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----~dg~i~iwd~  260 (454)
                      ..+.|+++.-+  ...+++|..+|.|.+-....   ..-....+|..+.++++|++ |.+.|++|-    .|..+.|||+
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi  136 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI  136 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence            35667766543  45789999999999988722   22345567888999999998 455666663    3668999999


Q ss_pred             CCc--eeE--EEeec-cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEcc-ccCCeEEEEecCCCEEEEEe
Q psy17902        261 EDR--AYV--ETLFG-HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNG-HSRGIDMTRRVNDQQFITCG  332 (454)
Q Consensus       261 ~~~--~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~-~~~~i~~~~~~~~~~l~~~~  332 (454)
                      .++  .+.  ..|.+ ......+++|..+.+++++|.....+.++|++.....  .+.. ...+++.--| ..+++++. 
T Consensus       137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~-~~nY~cs~-  214 (783)
T KOG1008|consen  137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPF-SPNYFCSN-  214 (783)
T ss_pred             ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCC-CCCceecc-
Confidence            876  211  12222 4455678999988899999999999999999853322  1111 1112222211 34555554 


Q ss_pred             CCCCEEEEe-cCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecC-CCcEEEEEcC
Q psy17902        333 EDGTLSLWS-ILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSY-DGCVKLWKIT  394 (454)
Q Consensus       333 ~dg~i~iwd-~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~-dg~v~iwd~~  394 (454)
                      .||.|.+|| .++- .++..+....     ...+..+..++|+|... ++++.+. .++|+++++.
T Consensus       215 ~dg~iAiwD~~rnienpl~~i~~~~-----N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~  275 (783)
T KOG1008|consen  215 SDGDIAIWDTYRNIENPLQIILRNE-----NKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC  275 (783)
T ss_pred             ccCceeeccchhhhccHHHHHhhCC-----CCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence            499999999 3332 2332222111     11233589999999554 5555554 5789999875

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.35  E-value=0.0016  Score=60.50  Aligned_cols=261  Identities=12%  Similarity=0.049  Sum_probs=162.7

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecCCCcEEEEeCCC
Q psy17902        144 SITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDNNSNIKLWSSSL  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~v~vw~~~~  221 (454)
                      ....+.+.+++..++... ....+...+...........      ........+++++.+..++. ...++.|.+.|...
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~------~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~  105 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLS------VGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTAT  105 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccccceeeeecc------CCCccccceeeCCCCCeEEEecCCCCeEEEEcCcc
Confidence            355677788875444433 22344444443111111111      11134556788888875444 44468999999744


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee-CCCcE
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG-TDKSV  297 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i  297 (454)
                      ..+.....-......++++++++.++++..   ++++.+.|..+.+.+.....-..+ ..++++|+++.++.+. .++.|
T Consensus       106 ~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v  184 (381)
T COG3391         106 NTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTV  184 (381)
T ss_pred             cceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeE
Confidence            433333222336678999999988887765   689999999998888775443344 8899999998665554 78899


Q ss_pred             EEeeccCCeEEE------EccccCCeEEEEecCCCEEEEEe-CC--CCEEEEecCCCcccee-eecccCCCCCCCCCCcE
Q psy17902        298 RVWKIQEESQLV------FNGHSRGIDMTRRVNDQQFITCG-ED--GTLSLWSILKKVPTHT-IPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       298 ~i~d~~~~~~~~------~~~~~~~i~~~~~~~~~~l~~~~-~d--g~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~i  367 (454)
                      .+.|........      ......+......+++.++.+.. .+  +.+...|..++..... .....        . ..
T Consensus       185 ~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~--------~-~~  255 (381)
T COG3391         185 SVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGS--------G-AP  255 (381)
T ss_pred             EEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEecccccc--------C-CC
Confidence            999977665553      33334445555666676555443 32  5888899887766655 22211        1 25


Q ss_pred             EEEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCC-ceeeeEEEEcCCC
Q psy17902        368 TSVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDH  420 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~d~  420 (454)
                      ..+.++|+|.++.+... .+.|.+.|..+......+..... ...+..+++.+..
T Consensus       256 ~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~~  310 (381)
T COG3391         256 RGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPLY  310 (381)
T ss_pred             CceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceeec
Confidence            66889999998887744 47899999888766665443221 2235556665543

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.34  E-value=0.00042  Score=64.75  Aligned_cols=190  Identities=13%  Similarity=0.090  Sum_probs=104.7

Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-------eccCCceeEEEeecCC
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-------FGHQSAITSLDILAKN  285 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~  285 (454)
                      .|.||+..+..+.++.-..+.|.++.|+.+ ..|++...||.+++||+.. +....+       .-....+....+..+|
T Consensus        62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G-~~~fsl~~~i~~~~v~e~~i~~~~~~~~G  139 (410)
T PF04841_consen   62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFG-EFQFSLGEEIEEEKVLECRIFAIWFYKNG  139 (410)
T ss_pred             EEEEECCCCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCC-ceeechhhhccccCcccccccccccCCCC
Confidence            489999988888877655589999999875 4566777999999999863 331111       1111222222333344


Q ss_pred             CEEEEeeCCCcEEEeeccCCe-EE-EEccccC---------CeE--EEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        286 RVISSGGTDKSVRVWKIQEES-QL-VFNGHSR---------GID--MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~-~~-~~~~~~~---------~i~--~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      -.+++  .++.+.+..--... .. .+.....         ...  .....+....+....++.+.+.+-.....   +.
T Consensus       140 ivvLt--~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i~  214 (410)
T PF04841_consen  140 IVVLT--GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---ID  214 (410)
T ss_pred             EEEEC--CCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---cc
Confidence            33333  34444433222211 11 1100000         000  11122333344444455555443322111   10


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                                ..+.+..|++||+|++||.-..+|.+.+.+..-.+.+..+... .......|.|.-++
T Consensus       215 ----------~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~-~~~~p~~~~WCG~d  271 (410)
T PF04841_consen  215 ----------SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD-SKSPPKQMAWCGND  271 (410)
T ss_pred             ----------CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC-cCCCCcEEEEECCC
Confidence                      1234999999999999999999999999886655566555542 23456677777554

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PRK02888 nitrous-oxide reductase; Validated

Probab=98.34  E-value=4.4e-05  Score=72.44  Aligned_cols=180  Identities=10%  Similarity=0.009  Sum_probs=110.0

Q ss_pred             cCCCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC----cEEEEeC-CCccE
Q psy17902        151 TSDSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS----NIKLWSS-SLEHL  224 (454)
Q Consensus       151 s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~v~vw~~-~~~~~  224 (454)
                      +|||+.+... -..+.+.+.|.++.+...++..       ......++++++|+++++.+.+.    ++...+. +...+
T Consensus       201 pnDGk~l~~~~ey~~~vSvID~etmeV~~qV~V-------dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~  273 (635)
T PRK02888        201 PNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMV-------DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWV  273 (635)
T ss_pred             CCCCCEeecccceeEEEEEEECccceEEEEEEe-------CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceE
Confidence            4455544322 2336677778777666555443       11345678899999998886432    3333332 11111


Q ss_pred             EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----ceeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEE
Q psy17902        225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-----RAYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVR  298 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~  298 (454)
                      ..+...  .+  -++.++|++...+  ++.|.+.|..+     ...+..+ .-......+.++|||+++++++ .+.+|.
T Consensus       274 vvfni~--~i--ea~vkdGK~~~V~--gn~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGkylyVanklS~tVS  346 (635)
T PRK02888        274 VVFNIA--RI--EEAVKAGKFKTIG--GSKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGKYFIANGKLSPTVT  346 (635)
T ss_pred             EEEchH--HH--HHhhhCCCEEEEC--CCEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCCEEEEeCCCCCcEE
Confidence            111110  00  0234577776663  57899999988     3444444 4556678999999998876554 588999


Q ss_pred             EeeccCCeE------------E-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        299 VWKIQEESQ------------L-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       299 i~d~~~~~~------------~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      |+|+.+.+.            . ...--.+++...+...++.+.+..-|..|..|++..
T Consensus       347 VIDv~k~k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~  405 (635)
T PRK02888        347 VIDVRKLDDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA  405 (635)
T ss_pred             EEEChhhhhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence            999987553            1 222233455555555667777788999999999865

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=98.32  E-value=0.0022  Score=57.63  Aligned_cols=270  Identities=9%  Similarity=0.034  Sum_probs=123.6

Q ss_pred             EEcCCCCEEEEEeC-C--CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE-
Q psy17902        149 AVTSDSKHVYSACK-D--GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHL-  224 (454)
Q Consensus       149 ~~s~~~~~l~~~~~-d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~-  224 (454)
                      +|.++|+.|+.++. +  ..+.+.|+.+++..+....      .........++++.+.++.......|.-.|+.+... 
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg------~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~  115 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDG------PGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEER  115 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---S------S-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EE
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccC------CCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEE
Confidence            56788876666554 4  4677778888776654432      111222355678888776655556888888844433 


Q ss_pred             EeecccCCCeEEEEEc--CCCCEEEEEe----------------------CCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        225 HTFTGHKAPITGLAIS--FECDTLYSSS----------------------NDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~--~~~~~l~~~~----------------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      ..+.....-+-...|.  .++..++..-                      -...|.-.|+.+|+....+ .-...+..+.
T Consensus       116 ~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~-~~~~wlgH~~  194 (386)
T PF14583_consen  116 VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVF-EDTDWLGHVQ  194 (386)
T ss_dssp             EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEE-EESS-EEEEE
T ss_pred             EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEE-ecCccccCcc
Confidence            3333344444445553  3455443321                      1134556677777654333 3556778899


Q ss_pred             eecCCCEEEEeeCCC-----cEEEeeccCCe--EEEEccccC--CeEE-EEecCCCEEEEEe-----CCCCEEEEecCCC
Q psy17902        281 ILAKNRVISSGGTDK-----SVRVWKIQEES--QLVFNGHSR--GIDM-TRRVNDQQFITCG-----EDGTLSLWSILKK  345 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg-----~i~i~d~~~~~--~~~~~~~~~--~i~~-~~~~~~~~l~~~~-----~dg~i~iwd~~~~  345 (454)
                      |+|....+++-|..|     .-|||-+++..  ......+..  .+.. .+.+++..+.--+     .+..|.-+|+.++
T Consensus       195 fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~  274 (386)
T PF14583_consen  195 FSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG  274 (386)
T ss_dssp             EETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT-
T ss_pred             cCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC
Confidence            999875555544333     13667665422  222222221  1222 2233454433211     2334666677766


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC----------------cEEEEEcCCCceeeEecc-----
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG----------------CVKLWKITPKRTLEFLQD-----  404 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------------~v~iwd~~~~~~~~~~~~-----  404 (454)
                      .........           +...+..+++|.+++-=+.|.                .|+++++..+........     
T Consensus       275 ~~~~~~~~p-----------~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~  343 (386)
T PF14583_consen  275 ERRRLMEMP-----------WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWK  343 (386)
T ss_dssp             -EEEEEEE------------SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE------
T ss_pred             CceEEEeCC-----------ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcce
Confidence            544322221           255667778998876544442                466777776643221110     


Q ss_pred             -CCCcee--eeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        405 -IPLSGV--INSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       405 -~~~~~~--v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                       ..+...  =....|||||++++..+...|...++
T Consensus       344 v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY  378 (386)
T PF14583_consen  344 VLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVY  378 (386)
T ss_dssp             -BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEE
T ss_pred             eecCCCccCCCCCccCCCCCEEEEECCCCCCccEE
Confidence             000011  13478999999999886666554444

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=98.30  E-value=0.0002  Score=66.90  Aligned_cols=166  Identities=11%  Similarity=0.113  Sum_probs=92.7

Q ss_pred             ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEe-eccCCeE
Q psy17902        229 GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW-KIQEESQ  307 (454)
Q Consensus       229 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~-d~~~~~~  307 (454)
                      .....+..+.++|+|++++++ .+|...|+.....+...     .+.-..++|.+.+. +++-...+.|.|+ ++.....
T Consensus        30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~~~~  102 (443)
T PF04053_consen   30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA-----FGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKNEVV  102 (443)
T ss_dssp             E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE-----EEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-TT
T ss_pred             CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc-----cCceeEEEEecCcc-EEEEECCCeEEEEEcCccccc
Confidence            344557889999999998885 46777788744443322     23446788988554 5556668889996 4433221


Q ss_pred             EEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902        308 LVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       308 ~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                      ..+. ....+..++.  |..|+..+ ++.|.+||+.+++.+..+....           |..+.|+++|.+++..+.+ .
T Consensus       103 k~i~-~~~~~~~If~--G~LL~~~~-~~~i~~yDw~~~~~i~~i~v~~-----------vk~V~Ws~~g~~val~t~~-~  166 (443)
T PF04053_consen  103 KSIK-LPFSVEKIFG--GNLLGVKS-SDFICFYDWETGKLIRRIDVSA-----------VKYVIWSDDGELVALVTKD-S  166 (443)
T ss_dssp             ------SS-EEEEE---SSSEEEEE-TTEEEEE-TTT--EEEEESS-E------------EEEEE-TTSSEEEEE-S--S
T ss_pred             eEEc-CCcccceEEc--CcEEEEEC-CCCEEEEEhhHcceeeEEecCC-----------CcEEEEECCCCEEEEEeCC-e
Confidence            1111 1122333333  55555554 4489999999999999987543           7899999999999999866 5


Q ss_pred             EEEEEcCCC-----------ceeeEeccCCCceeeeEEEEcCC
Q psy17902        388 VKLWKITPK-----------RTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       388 v~iwd~~~~-----------~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +.|++....           ..+..+..  ....|.+.+|..|
T Consensus       167 i~il~~~~~~~~~~~~~g~e~~f~~~~E--~~~~IkSg~W~~d  207 (443)
T PF04053_consen  167 IYILKYNLEAVAAIPEEGVEDAFELIHE--ISERIKSGCWVED  207 (443)
T ss_dssp             EEEEEE-HHHHHHBTTTB-GGGEEEEEE--E-S--SEEEEETT
T ss_pred             EEEEEecchhcccccccCchhceEEEEE--ecceeEEEEEEcC
Confidence            888876432           13333332  2567888999866

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.26  E-value=0.0052  Score=59.52  Aligned_cols=191  Identities=7%  Similarity=-0.000  Sum_probs=112.2

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce-------EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI-------LALAVANNNELVASGDNNSNIKLWSS-SLEHLH  225 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~  225 (454)
                      +..|++++.++.|.-.|..+++.+..+........  ..+       ..+++.  +..++.++.++.|..+|. +++.+.
T Consensus        69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~--~~~~~~~~~~rg~av~--~~~v~v~t~dg~l~ALDa~TGk~~W  144 (527)
T TIGR03075        69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDV--IPVMCCDVVNRGVALY--DGKVFFGTLDARLVALDAKTGKVVW  144 (527)
T ss_pred             CCEEEEECCCCcEEEEECCCCceeeEecCCCCccc--ccccccccccccceEE--CCEEEEEcCCCEEEEEECCCCCEEe
Confidence            45777788889999999999988876553211000  011       112222  345777888899999998 777776


Q ss_pred             eecccCCC-eEEEEEcC--CCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCC----------------------
Q psy17902        226 TFTGHKAP-ITGLAISF--ECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQS----------------------  274 (454)
Q Consensus       226 ~~~~~~~~-v~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~----------------------  274 (454)
                      ........ -..+.-+|  .+..++++..      +|.|..+|..+|+.+..+..-..                      
T Consensus       145 ~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~  224 (527)
T TIGR03075       145 SKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP  224 (527)
T ss_pred             ecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence            55421100 00111112  1234555542      68999999999988766532110                      


Q ss_pred             ---------ce-eEEEeecCCCEEEEeeCC-----C-----------cEEEeeccCCeEE-EEccccCC---------eE
Q psy17902        275 ---------AI-TSLDILAKNRVISSGGTD-----K-----------SVRVWKIQEESQL-VFNGHSRG---------ID  318 (454)
Q Consensus       275 ---------~v-~~~~~~~~~~~l~~~~~d-----g-----------~i~i~d~~~~~~~-~~~~~~~~---------i~  318 (454)
                               .+ ..+++.|...+++.+..+     +           .|.-.|+++++.. .++.....         ..
T Consensus       225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~  304 (527)
T TIGR03075       225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMI  304 (527)
T ss_pred             CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcE
Confidence                     11 134666666666655422     2           5677788888876 33322111         12


Q ss_pred             EEEe-cCCC---EEEEEeCCCCEEEEecCCCccc
Q psy17902        319 MTRR-VNDQ---QFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       319 ~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      .+.. .++.   .++.+..+|.+.+.|..+++++
T Consensus       305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             EEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            2222 2444   6778899999999999999876

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.23  E-value=0.0012  Score=60.09  Aligned_cols=212  Identities=16%  Similarity=0.243  Sum_probs=121.1

Q ss_pred             cEEEEeC-CCccEEeecc-cCCCeEEE---EEcCC----CCEEEEEeC----------CCcEEEEeCCCc----eeEEEe
Q psy17902        213 NIKLWSS-SLEHLHTFTG-HKAPITGL---AISFE----CDTLYSSSN----------DRSIKVWNIEDR----AYVETL  269 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~-~~~~v~~~---~~~~~----~~~l~~~~~----------dg~i~iwd~~~~----~~~~~~  269 (454)
                      .|++.|. +...+..+.- ....++++   .+..+    ..+|++|+.          .|.|.++++...    ..+..+
T Consensus         3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i   82 (321)
T PF03178_consen    3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI   82 (321)
T ss_dssp             EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred             EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence            5777777 4444444321 12233333   33322    467777653          288999999884    122222


Q ss_pred             --eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe-EEEEccc--cCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        270 --FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES-QLVFNGH--SRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       270 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~--~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                        ....++|++++-. ++. |+++ ..+.|.+|++.... ......+  ...+..+... ++++++|.....+.++....
T Consensus        83 ~~~~~~g~V~ai~~~-~~~-lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~-~~~I~vgD~~~sv~~~~~~~  158 (321)
T PF03178_consen   83 HSTEVKGPVTAICSF-NGR-LVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF-KNYILVGDAMKSVSLLRYDE  158 (321)
T ss_dssp             EEEEESS-EEEEEEE-TTE-EEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE-TTEEEEEESSSSEEEEEEET
T ss_pred             EEEeecCcceEhhhh-CCE-EEEe-ecCEEEEEEccCcccchhhheecceEEEEEEecc-ccEEEEEEcccCEEEEEEEc
Confidence              2457889999877 444 4433 45889999999888 5522222  2233444333 56899999888899886544


Q ss_pred             -CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-------Cc-eeeEeccCCCceeeeEE-
Q psy17902        345 -KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-------KR-TLEFLQDIPLSGVINSL-  414 (454)
Q Consensus       345 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-------~~-~~~~~~~~~~~~~v~~l-  414 (454)
                       ...+..+....       .+.+++++.|-++++.++++..+|.|.++....       +. .+........+..|+++ 
T Consensus       159 ~~~~l~~va~d~-------~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~  231 (321)
T PF03178_consen  159 ENNKLILVARDY-------QPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFR  231 (321)
T ss_dssp             TTE-EEEEEEES-------S-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEE
T ss_pred             cCCEEEEEEecC-------CCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEE
Confidence             22222222211       255699999997778999999999999998863       12 34444333456678887 


Q ss_pred             --EEcCC--CC------EEEEEecCCCceeee
Q psy17902        415 --VFTSD--HK------HLVAGIGTEHRFGRW  436 (454)
Q Consensus       415 --~~s~d--~~------~l~~~~~~d~~i~~W  436 (454)
                        ++.|.  +.      .++.+ +.+|.|...
T Consensus       232 ~~~l~~~~~~~~~~~~~~i~~~-T~~G~Ig~l  262 (321)
T PF03178_consen  232 RGSLIPRSGSSESPNRPQILYG-TVDGSIGVL  262 (321)
T ss_dssp             E--SS--SSSS-TTEEEEEEEE-ETTS-EEEE
T ss_pred             EEEeeecCCCCcccccceEEEE-ecCCEEEEE
Confidence              66662  22      24444 578888643

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=98.22  E-value=0.00055  Score=62.22  Aligned_cols=211  Identities=18%  Similarity=0.243  Sum_probs=120.0

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEE---EeC----CCcEEEEecC---------C-CcEEEEeCCCc----
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALA---VAN----NNELVASGDN---------N-SNIKLWSSSLE----  222 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~----~~~~l~~~~~---------d-g~v~vw~~~~~----  222 (454)
                      +.|++.|..+...+..+.+.     ....+.+++   +..    ...+|++|+.         . |.|.++++...    
T Consensus         2 s~i~l~d~~~~~~~~~~~l~-----~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~   76 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELE-----PNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENN   76 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEE-----TTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS----
T ss_pred             cEEEEEeCCCCeEEEEEECC-----CCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccc
Confidence            35778887777766555542     222344443   332    2567887753         2 88999999442    


Q ss_pred             -cEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-eEEEe-eccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        223 -HLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-YVETL-FGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       223 -~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                       .+..+  ....++|++++-. ++ +|+++. .+.|.+|++...+ ....- ......+.++...  +++|++|.....+
T Consensus        77 ~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv  151 (321)
T PF03178_consen   77 FKLKLIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSV  151 (321)
T ss_dssp             -EEEEEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSE
T ss_pred             eEEEEEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCE
Confidence             33322  3457889998876 33 455544 4889999998777 33222 1223355555554  6799999988889


Q ss_pred             EEeeccC-CeEE-EEcc--ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC-------c-cceeeecccCCCCCCCCC
Q psy17902        298 RVWKIQE-ESQL-VFNG--HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK-------V-PTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       298 ~i~d~~~-~~~~-~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~-------~-~~~~~~~~~~~~~~~~~~  364 (454)
                      .++..+. ...+ ....  ....+.++.+. +++.++++..+|.|.++.....       . .+......+       ..
T Consensus       152 ~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~-------lg  224 (321)
T PF03178_consen  152 SLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFH-------LG  224 (321)
T ss_dssp             EEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--------S
T ss_pred             EEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEE-------CC
Confidence            8886654 2223 2222  23345555555 5568999999999999987531       1 111111111       12


Q ss_pred             CcEEEE---EEecC--C------CEEEEecCCCcEEEE
Q psy17902        365 NWITSV---ACLHN--S------DLVASGSYDGCVKLW  391 (454)
Q Consensus       365 ~~i~~~---~~s~~--~------~~l~~~~~dg~v~iw  391 (454)
                      ..|+++   .+.|.  +      ..++.++.+|.|.+.
T Consensus       225 ~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l  262 (321)
T PF03178_consen  225 DIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL  262 (321)
T ss_dssp             S-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred             CccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence            237777   54451  2      247778888888844

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=98.19  E-value=0.0031  Score=54.04  Aligned_cols=199  Identities=9%  Similarity=0.118  Sum_probs=111.2

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ...+.+  -...++.++|+|+.+ ++++....+.|..++.+ ++.+..+++     ......-.|++..++.++++--.+
T Consensus        14 ~~~l~g--~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l-----~g~~D~EgI~y~g~~~~vl~~Er~   85 (248)
T PF06977_consen   14 AKPLPG--ILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPL-----DGFGDYEGITYLGNGRYVLSEERD   85 (248)
T ss_dssp             EEE-TT----S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE------SS-SSEEEEEE-STTEEEEEETTT
T ss_pred             eeECCC--ccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeC-----CCCCCceeEEEECCCEEEEEEcCC
Confidence            345555  555699999999866 55556666888888875 677777665     334568889999888888877778


Q ss_pred             CcEEEEeC--CCccE-----Eee-----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---ceeEEEe-------
Q psy17902        212 SNIKLWSS--SLEHL-----HTF-----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED---RAYVETL-------  269 (454)
Q Consensus       212 g~v~vw~~--~~~~~-----~~~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~-------  269 (454)
                      +.+.++++  .+..+     ..+     ..++..+-.++|.+.++.|+++-...-..+|.+..   ...+...       
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~  165 (248)
T PF06977_consen   86 QRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDD  165 (248)
T ss_dssp             TEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-
T ss_pred             CcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccccccc
Confidence            99999887  22211     111     13556789999999988888887776666776653   2111111       


Q ss_pred             -eccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE---EEcccc-------CCeEEEEecCCCEEEEEeCCCCE
Q psy17902        270 -FGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL---VFNGHS-------RGIDMTRRVNDQQFITCGEDGTL  337 (454)
Q Consensus       270 -~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~-------~~i~~~~~~~~~~l~~~~~dg~i  337 (454)
                       ......+.+++++|.. ++++....+..|.++| ..++..   .+....       ..-..+++.+.+.|...+.-+..
T Consensus       166 ~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlf  244 (248)
T PF06977_consen  166 DKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLF  244 (248)
T ss_dssp             HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEE
T ss_pred             ccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceE
Confidence             1234557889999875 5666677788899999 445544   222210       12234444455555555555544


Q ss_pred             EEE
Q psy17902        338 SLW  340 (454)
Q Consensus       338 ~iw  340 (454)
                      ++|
T Consensus       245 y~f  247 (248)
T PF06977_consen  245 YRF  247 (248)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            443

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.19  E-value=4.4e-05  Score=75.15  Aligned_cols=143  Identities=16%  Similarity=0.128  Sum_probs=96.6

Q ss_pred             CCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-----CCcEEEEecCCCcEEEEeC--CCccE
Q psy17902        153 DSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-----NNELVASGDNNSNIKLWSS--SLEHL  224 (454)
Q Consensus       153 ~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~v~vw~~--~~~~~  224 (454)
                      +.++|+.. .....|+-.|++.++.+..+..     ....+|..++-..     .....+.|-.+..+..||.  .+..+
T Consensus       492 d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~-----~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~  566 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLERGKVVEEWKV-----HDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKL  566 (794)
T ss_pred             ccceEeecCCCCCceEEEecCCCcEEEEeec-----CCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCce
Confidence            34454443 3457888899999999888775     2223355443321     1234566777889999998  33333


Q ss_pred             Eee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEe
Q psy17902        225 HTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW  300 (454)
Q Consensus       225 ~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~  300 (454)
                      ..-    .......+|++-+.+| +||+|+.+|.|++||--..+....+.+...+|.+|..+.||++|++.+ +..|.++
T Consensus       567 v~~~~k~Y~~~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi  644 (794)
T PF08553_consen  567 VDSQSKQYSSKNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLI  644 (794)
T ss_pred             eeccccccccCCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEE
Confidence            221    1244567788777655 899999999999999543333445567789999999999999988665 5567777


Q ss_pred             ec
Q psy17902        301 KI  302 (454)
Q Consensus       301 d~  302 (454)
                      +.
T Consensus       645 ~t  646 (794)
T PF08553_consen  645 DT  646 (794)
T ss_pred             EE
Confidence            65

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=98.18  E-value=0.00045  Score=63.47  Aligned_cols=112  Identities=12%  Similarity=0.149  Sum_probs=70.6

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEE---EEcCCCc---eecccCCcccCC-CCCCceEEEEEe-----------CCCcEEEEe
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIK---WLLETRS---KVCSSPFVKTDR-KSYPPILALAVA-----------NNNELVASG  208 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~i---wd~~~~~---~~~~~~~~~~~~-~~~~~v~~~~~~-----------~~~~~l~~~  208 (454)
                      +++.+|++.+||.+..+..+.+   |+.....   ....+....... .....|+++.+-           +|...+++|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            5678899999999987766655   5432111   111111111111 111456665553           345789999


Q ss_pred             cCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCC---------CEEEEEeCCCcEEEEe
Q psy17902        209 DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFEC---------DTLYSSSNDRSIKVWN  259 (454)
Q Consensus       209 ~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~~dg~i~iwd  259 (454)
                      ..+|.|++|..++..+..-.-|..+|..|.+....         ..|..... +.|.+.|
T Consensus        86 ~ssG~vrfyte~G~LL~~Q~~h~~pV~~ik~~~~~~~~~~~~~~eel~ily~-~~v~~Id  144 (415)
T PF14655_consen   86 TSSGYVRFYTENGVLLLSQLLHEEPVLKIKCRSTKIPRHPGDSSEELSILYP-SAVVIID  144 (415)
T ss_pred             ecccEEEEEeccchHHHHHhcCccceEEEEecccCCCCCCcccccEEEEEEC-CEEEEEe
Confidence            99999999999888888777899999999885321         33444444 5566655

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.17  E-value=0.0042  Score=58.83  Aligned_cols=238  Identities=13%  Similarity=0.173  Sum_probs=127.4

Q ss_pred             eEEEEEcCCCCEEEEEe-CCC----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC-------
Q psy17902        145 ITCIAVTSDSKHVYSAC-KDG----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS-------  212 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~-~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------  212 (454)
                      +..+++||++++||.+- ..|    .|+++|+.+++.+...-       .......+.|.++++.|+....+.       
T Consensus       126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-------~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~  198 (414)
T PF02897_consen  126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-------ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDS  198 (414)
T ss_dssp             EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-------EEEESEEEEECTTSSEEEEEECSTTTSS-CC
T ss_pred             eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-------cccccceEEEeCCCCEEEEEEeCcccccccC
Confidence            44678999999998663 333    69999999986654321       111222399999988766654332       


Q ss_pred             ----cEEEEeCCCc-c--EEeecccCCC--eEEEEEcCCCCEEEEEeC---C-CcEEEEeCCCc----eeEEEeeccCCc
Q psy17902        213 ----NIKLWSSSLE-H--LHTFTGHKAP--ITGLAISFECDTLYSSSN---D-RSIKVWNIEDR----AYVETLFGHQSA  275 (454)
Q Consensus       213 ----~v~vw~~~~~-~--~~~~~~~~~~--v~~~~~~~~~~~l~~~~~---d-g~i~iwd~~~~----~~~~~~~~~~~~  275 (454)
                          .|+.|.+... .  ...+......  ...+..++++++|+..+.   + ..+++.++..+    .....+......
T Consensus       199 ~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~  278 (414)
T PF02897_consen  199 GYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDG  278 (414)
T ss_dssp             GCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS
T ss_pred             CCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCc
Confidence                3778887222 1  2344333332  567888999998876443   2 35788888764    223333333333


Q ss_pred             ee-EEEeecCCCEEEEee---CCCcEEEeeccCCeE----EEEccccC--CeEEEEecCCCEEEEEeCCC--CEEEEecC
Q psy17902        276 IT-SLDILAKNRVISSGG---TDKSVRVWKIQEESQ----LVFNGHSR--GIDMTRRVNDQQFITCGEDG--TLSLWSIL  343 (454)
Q Consensus       276 v~-~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~----~~~~~~~~--~i~~~~~~~~~~l~~~~~dg--~i~iwd~~  343 (454)
                      +. .+... .+.+++...   ..+.|...++.....    ..+..+..  .+..+....+.+++....++  .|+++++.
T Consensus       279 ~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~  357 (414)
T PF02897_consen  279 VEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLD  357 (414)
T ss_dssp             -EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred             eEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECC
Confidence            43 34333 444444332   245677777776542    24444444  23334333444444444444  57888887


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE-E-EecC--CCcEEEEEcCCCce
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV-A-SGSY--DGCVKLWKITPKRT  398 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~-~~~~--dg~v~iwd~~~~~~  398 (454)
                      .+.....++...        .+.|..+...++++.+ + ..|.  -+++..||+.+++.
T Consensus       358 ~~~~~~~~~~p~--------~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  358 DGKESREIPLPE--------AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             -TEEEEEEESSS--------SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             CCcEEeeecCCc--------ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            344444444322        1225566555655522 2 2222  35688888877743

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.13  E-value=0.0066  Score=57.49  Aligned_cols=242  Identities=11%  Similarity=0.140  Sum_probs=128.5

Q ss_pred             ceEEEEEeCCCcEEEEec-CCC----cEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC-----------c
Q psy17902        192 PILALAVANNNELVASGD-NNS----NIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR-----------S  254 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~-~dg----~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~  254 (454)
                      .+..+.++|+|++||.+- ..|    .|+++|+ ++..+.... .......+.|.++++.|+....+.           .
T Consensus       125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~  203 (414)
T PF02897_consen  125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-ENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ  203 (414)
T ss_dssp             EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-EEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred             EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-cccccceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence            444688999999988763 233    6999999 554433221 111223399999988877665433           3


Q ss_pred             EEEEeCCCcee--EEEeeccCCc--eeEEEeecCCCEEEEeeCC----CcEEEeeccCC-----eEEEEccccCCeE-EE
Q psy17902        255 IKVWNIEDRAY--VETLFGHQSA--ITSLDILAKNRVISSGGTD----KSVRVWKIQEE-----SQLVFNGHSRGID-MT  320 (454)
Q Consensus       255 i~iwd~~~~~~--~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~-----~~~~~~~~~~~i~-~~  320 (454)
                      |+.|.+.+...  ...+......  ...+..++++++|+..+..    ..+++.++...     ....+......+. .+
T Consensus       204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v  283 (414)
T PF02897_consen  204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV  283 (414)
T ss_dssp             EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred             EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence            78888877643  2333333322  5678889999987654332    34788888764     3334444443443 33


Q ss_pred             EecCCCEEEEEe---CCCCEEEEecCCCccc--eeeecccCCCCCCCCCCcEEEEEEecCCCE-EEEecCCC--cEEEEE
Q psy17902        321 RRVNDQQFITCG---EDGTLSLWSILKKVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDL-VASGSYDG--CVKLWK  392 (454)
Q Consensus       321 ~~~~~~~l~~~~---~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg--~v~iwd  392 (454)
                      ....+.+++...   ..+.|...++......  ...-..+..      ...+..+..  .+++ ++....++  .|++++
T Consensus       284 ~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~------~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~  355 (414)
T PF02897_consen  284 DHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDE------DVSLEDVSL--FKDYLVLSYRENGSSRLRVYD  355 (414)
T ss_dssp             EEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SS------SEEEEEEEE--ETTEEEEEEEETTEEEEEEEE
T ss_pred             EccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCC------ceeEEEEEE--ECCEEEEEEEECCccEEEEEE
Confidence            333333333332   3456777777665531  111111110      112444444  3444 44444444  588899


Q ss_pred             cCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---CCCceeeeeeeCCCe
Q psy17902        393 ITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG---TEHRFGRWKTIKGVK  443 (454)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~---~d~~i~~W~~~~~~~  443 (454)
                      +..+.....+... ..+.|..+...+++..+....+   .-..+..++..++..
T Consensus       356 ~~~~~~~~~~~~p-~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~  408 (414)
T PF02897_consen  356 LDDGKESREIPLP-EAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL  408 (414)
T ss_dssp             TT-TEEEEEEESS-SSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred             CCCCcEEeeecCC-cceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence            8844444444432 4456777777777776654422   245566666655543

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>KOG2079|consensus

Probab=98.12  E-value=8.8e-05  Score=73.23  Aligned_cols=105  Identities=18%  Similarity=0.296  Sum_probs=80.4

Q ss_pred             EEeCCCcEEEEecCCCcEEEEeCCCcc--EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC
Q psy17902        197 AVANNNELVASGDNNSNIKLWSSSLEH--LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS  274 (454)
Q Consensus       197 ~~~~~~~~l~~~~~dg~v~vw~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  274 (454)
                      +..-.+..++.|+..|.+-..|+++..  ...-..-.++|++++|+.+|..++.|-.+|.|.+||+..++.++.+..|..
T Consensus        94 s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~a  173 (1206)
T KOG2079|consen   94 SSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGA  173 (1206)
T ss_pred             eeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCC
Confidence            333356689999999999999985542  233344678999999999999999999999999999999998888877776


Q ss_pred             ceeEEE---eecCCCEEEEeeCCCcEEEeecc
Q psy17902        275 AITSLD---ILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       275 ~v~~~~---~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      +.+++-   +..++..++++...|.  +|.+.
T Consensus       174 p~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  174 PVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             ccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            665544   4455667888777776  56543

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=98.10  E-value=0.0067  Score=58.77  Aligned_cols=151  Identities=11%  Similarity=0.030  Sum_probs=90.1

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------CCCcEEEEeC-CCccEEee
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------NNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~v~vw~~-~~~~~~~~  227 (454)
                      ..++.++.++.|.-.|..+++.+...........  ..+.+--.-.++. |+++.      .+|.|..+|. +++.+..+
T Consensus       121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~--~~~tssP~v~~g~-Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~  197 (527)
T TIGR03075       121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAG--YTITAAPLVVKGK-VITGISGGEFGVRGYVTAYDAKTGKLVWRR  197 (527)
T ss_pred             CEEEEEcCCCEEEEEECCCCCEEeeccccccccc--ccccCCcEEECCE-EEEeecccccCCCcEEEEEECCCCceeEec
Confidence            4677888899999999999998876654211100  0111100011343 44443      2578888888 66665543


Q ss_pred             cccC-------------------------------CCe-EEEEEcCCCCEEEEEeCC-----C-----------cEEEEe
Q psy17902        228 TGHK-------------------------------API-TGLAISFECDTLYSSSND-----R-----------SIKVWN  259 (454)
Q Consensus       228 ~~~~-------------------------------~~v-~~~~~~~~~~~l~~~~~d-----g-----------~i~iwd  259 (454)
                      ..-.                               ..+ ..+++.+...+++.+..+     +           .|.-.|
T Consensus       198 ~~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld  277 (527)
T TIGR03075       198 YTVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARD  277 (527)
T ss_pred             cCcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEc
Confidence            2211                               111 134566666666666522     2           577788


Q ss_pred             CCCceeEEEeeccCCcee---------EEEeecCCC---EEEEeeCCCcEEEeeccCCeEE
Q psy17902        260 IEDRAYVETLFGHQSAIT---------SLDILAKNR---VISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       260 ~~~~~~~~~~~~~~~~v~---------~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      +++|+....++.....+.         -+.+..+|+   .++.+..+|.+++.|-.+++.+
T Consensus       278 ~~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i  338 (527)
T TIGR03075       278 PDTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL  338 (527)
T ss_pred             cccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence            999998877754222221         122223565   7888999999999999998874

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=98.10  E-value=0.0087  Score=55.66  Aligned_cols=242  Identities=7%  Similarity=0.013  Sum_probs=149.9

Q ss_pred             ceEEEEEeCCCcEEEEecCC-CcEEEEeCCCccEEee-cccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCceeEEE
Q psy17902        192 PILALAVANNNELVASGDNN-SNIKLWSSSLEHLHTF-TGHKAPITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~d-g~v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      ....+.+.+++..+...... ..+...+.....+... ..-......++.++.+..++ +...++.|.+.|..+......
T Consensus        32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~  111 (381)
T COG3391          32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGS  111 (381)
T ss_pred             CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeE
Confidence            45567777877544444322 2344444331111111 11113445778888887444 444568999999887777666


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeC---CCcEEEeeccCCeEEEEc-cccCCeEEEEecCCCEEEEEe-CCCCEEEEecC
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGT---DKSVRVWKIQEESQLVFN-GHSRGIDMTRRVNDQQFITCG-EDGTLSLWSIL  343 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~  343 (454)
                      ... ......++++++++.+.++..   ++.+.+.|..+....... .-..+...+..+.+..++... .++.|.+.|..
T Consensus       112 ~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P~~~a~~p~g~~vyv~~~~~~~v~vi~~~  190 (381)
T COG3391         112 IPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTPTGVAVDPDGNKVYVTNSDDNTVSVIDTS  190 (381)
T ss_pred             eee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCcceEEECCCCCeEEEEecCCCeEEEEeCC
Confidence            542 225678999999977776655   688999998888777332 111345666667777555544 78999999976


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      ...... -......    ........+.++|+|..+.+....   +.+...|..++............ ....+.++|+|
T Consensus       191 ~~~v~~-~~~~~~~----~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~p~g  264 (381)
T COG3391         191 GNSVVR-GSVGSLV----GVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVDPAG  264 (381)
T ss_pred             Ccceec-ccccccc----ccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeECCCC
Confidence            654442 1100000    011225678999999965554433   58999998887666542221222 56678999999


Q ss_pred             CEEEEEecCCCceeeeeeeC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~  440 (454)
                      .++.+.....+.+.+.+...
T Consensus       265 ~~~yv~~~~~~~V~vid~~~  284 (381)
T COG3391         265 KAAYVANSQGGTVSVIDGAT  284 (381)
T ss_pred             CEEEEEecCCCeEEEEeCCC
Confidence            99998866667777766544

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.04  E-value=0.00084  Score=62.60  Aligned_cols=158  Identities=14%  Similarity=0.026  Sum_probs=100.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe---CC-CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCc--
Q psy17902        141 HRASITCIAVTSDSKHVYSAC---KD-GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSN--  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~--  213 (454)
                      -...+..-+|+|++..++...   .. ..+.++++.++.......+       ...-..-+|+|||+.|+.+. .||.  
T Consensus       191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~-------~g~~~~P~fspDG~~l~f~~~rdg~~~  263 (425)
T COG0823         191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNF-------NGNNGAPAFSPDGSKLAFSSSRDGSPD  263 (425)
T ss_pred             cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeecc-------CCccCCccCCCCCCEEEEEECCCCCcc
Confidence            345567778999988766542   22 4689999998766554432       22344568999998877654 4554  


Q ss_pred             EEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        214 IKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       214 v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      |.+.|+.++.+..+....+.-..=.|+|+|+.++-.+. .|  .|.+++++..... .+......-..-.|+|+|++|+.
T Consensus       264 iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~-riT~~~~~~~~p~~SpdG~~i~~  342 (425)
T COG0823         264 IYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVT-RLTFSGGGNSNPVWSPDGDKIVF  342 (425)
T ss_pred             EEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCcee-EeeccCCCCcCccCCCCCCEEEE
Confidence            55666655555555544444446689999998887654 33  5777777766543 33222222237789999998877


Q ss_pred             eeCC-Cc--EEEeeccCCe
Q psy17902        291 GGTD-KS--VRVWKIQEES  306 (454)
Q Consensus       291 ~~~d-g~--i~i~d~~~~~  306 (454)
                      .+.. |.  |.+.|+.++.
T Consensus       343 ~~~~~g~~~i~~~~~~~~~  361 (425)
T COG0823         343 ESSSGGQWDIDKNDLASGG  361 (425)
T ss_pred             EeccCCceeeEEeccCCCC
Confidence            6643 43  6666665544

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=98.02  E-value=0.001  Score=61.99  Aligned_cols=204  Identities=10%  Similarity=0.067  Sum_probs=122.0

Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe---CC-CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS---ND-RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      .+.+-|.++.....+......+..-+|+|++..++..+   .. ..+.++++.++....... ..+.-..-.|+|+|+.|
T Consensus       174 ~l~~~D~dg~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l  252 (425)
T COG0823         174 ELALGDYDGYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKL  252 (425)
T ss_pred             eEEEEccCCcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEE
Confidence            44444445555556665666777788999987766542   22 459999999886554432 23334457899999765


Q ss_pred             E-EeeCCCc--EEEeeccCCeEEEEcccc-CCeEEEEecCCCEEEEEe-CCCC--EEEEecCCCccceeeecccCCCCCC
Q psy17902        289 S-SGGTDKS--VRVWKIQEESQLVFNGHS-RGIDMTRRVNDQQFITCG-EDGT--LSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       289 ~-~~~~dg~--i~i~d~~~~~~~~~~~~~-~~i~~~~~~~~~~l~~~~-~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      + +...||.  |+++|+.+.....+.... ....-.+.+++..++-.+ ..|.  |.++++..... ..+....+.    
T Consensus       253 ~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~----  327 (425)
T COG0823         253 AFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGG----  327 (425)
T ss_pred             EEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCC----
Confidence            4 4555664  666777776644322221 122344456777776555 4454  55556555444 333222211    


Q ss_pred             CCCCcEEEEEEecCCCEEEEecC-CCc--EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        362 SEPNWITSVACLHNSDLVASGSY-DGC--VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                           -..-.|+|+|++|+..+. +|.  |.+.++.++..++.+.   .......-+|.|+|+.+....+..
T Consensus       328 -----~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt---~~~~~e~ps~~~ng~~i~~~s~~~  391 (425)
T COG0823         328 -----NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT---STYLNESPSWAPNGRMIMFSSGQG  391 (425)
T ss_pred             -----CcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc---ccccCCCCCcCCCCceEEEeccCC
Confidence                 226678999998877764 344  6677776665444444   344455678899999887764444

>KOG1897|consensus

Probab=98.01  E-value=0.014  Score=57.99  Aligned_cols=300  Identities=12%  Similarity=0.119  Sum_probs=155.2

Q ss_pred             CCCCeEEEEEcCCC------CEEEEEeCCCeEEEEE-cCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        141 HRASITCIAVTSDS------KHVYSACKDGIIIKWL-LETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~------~~l~~~~~dg~i~iwd-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      -...|.|+.++|-|      +++++|.++..+.+.- +.+..........  ...-...|.-..|-.+..+|.++..||.
T Consensus       529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~--~~~iPRSIl~~~~e~d~~yLlvalgdG~  606 (1096)
T KOG1897|consen  529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLS--GEIIPRSILLTTFEGDIHYLLVALGDGA  606 (1096)
T ss_pred             ecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccC--CCccchheeeEEeeccceEEEEEcCCce
Confidence            45679999999742      3789998887665543 2332222221110  0112335667777778899999999999


Q ss_pred             EEEEeC--CCccEEee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE-eecC--C
Q psy17902        214 IKLWSS--SLEHLHTF---TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD-ILAK--N  285 (454)
Q Consensus       214 v~vw~~--~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~--~  285 (454)
                      +.-|.+  ........   .-...|+.--.|+..+..-+-+..|.-..+|.-+ ++.+.+-- .-..+..++ |+.+  .
T Consensus       607 l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n-~kLv~spl-s~kev~~~c~f~s~a~~  684 (1096)
T KOG1897|consen  607 LLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSN-GKLVYSPL-SLKEVNHMCPFNSDAYP  684 (1096)
T ss_pred             EEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecC-CcEEEecc-chHHhhhhcccccccCC
Confidence            887765  22222211   2234566666676655544444456666666654 33322211 111122221 2222  2


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecC-CCEEEEEeC-----------C---CCEEEEecCCCcc
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVN-DQQFITCGE-----------D---GTLSLWSILKKVP  347 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~-~~~l~~~~~-----------d---g~i~iwd~~~~~~  347 (454)
                      ..++++ ..+.+++.-+..-+.+   +..-+..+-. +++.+ ...+.+.+.           .   ..++++|-++.+.
T Consensus       685 d~l~~~-~~~~l~i~tid~iqkl~irtvpl~~~prr-I~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~v  762 (1096)
T KOG1897|consen  685 DSLASA-NGGALTIGTIDEIQKLHIRTVPLGESPRR-ICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEV  762 (1096)
T ss_pred             ceEEEe-cCCceEEEEecchhhcceeeecCCCChhh-eEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeE
Confidence            334443 3455666655432222   2222221111 12221 222222221           1   2366777766655


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecC-CCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHN-SDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      ++..+.....     ....|.++.|..+ +.++++|+.          .|.|.+|.+..+..+..+......+.+.++..
T Consensus       763 l~~hef~~~E-----~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~  837 (1096)
T KOG1897|consen  763 LSSHEFERNE-----TALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE  837 (1096)
T ss_pred             Eeeccccccc-----eeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhh
Confidence            5544332211     1122566668877 567777753          48899999988666666666556778888765


Q ss_pred             cCCCCEEEEEecCCCceeeeeee------CCCeeEEEEEEeec
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTI------KGVKNTVAIIDIQL  453 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~------~~~~~~~~~~~~~~  453 (454)
                      - +|++||.- +..-+++-|-..      .+..+.+.+++++.
T Consensus       838 f-ngkllA~I-n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v  878 (1096)
T KOG1897|consen  838 F-NGKLLAGI-NQSVRLYEWTTERELRIECNISNPIIALDLQV  878 (1096)
T ss_pred             h-CCeEEEec-CcEEEEEEccccceehhhhcccCCeEEEEEEe
Confidence            4 46666544 444444444322      23445566665543

>KOG1008|consensus

Probab=98.00  E-value=1.4e-06  Score=80.48  Aligned_cols=160  Identities=13%  Similarity=0.215  Sum_probs=106.7

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEe----CCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        141 HRASITCIAVTS-DSKHVYSAC----KDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~----~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      |....++++|++ |.+.||+|-    .|..+.|||+.+.-  ......+..   +......+++|-.+.+++.+|.....
T Consensus       101 ~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~---~~l~gqns~cwlrd~klvlaGm~sr~  177 (783)
T KOG1008|consen  101 YARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSS---STLDGQNSVCWLRDTKLVLAGMTSRS  177 (783)
T ss_pred             ccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccc---ccccCccccccccCcchhhcccccch
Confidence            788899999998 567888774    35689999998762  222222111   23345668888889999999999999


Q ss_pred             EEEEeCCCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeC-CCc-eeEEEeeccC----CceeEEEeecCC-
Q psy17902        214 IKLWSSSLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNI-EDR-AYVETLFGHQ----SAITSLDILAKN-  285 (454)
Q Consensus       214 v~vw~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~-~~~-~~~~~~~~~~----~~v~~~~~~~~~-  285 (454)
                      +.++|+.........-.+..+..+...| .++++++-. ||.|.+||. ..- .++..+....    ..+..++|.|.. 
T Consensus       178 ~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrt  256 (783)
T KOG1008|consen  178 VHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRT  256 (783)
T ss_pred             hhhhhhhhhhhhhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCc
Confidence            9999985444333333445667778888 666776655 999999993 322 2222222122    248999999865 


Q ss_pred             CEEEEee-CCCcEEEeeccC
Q psy17902        286 RVISSGG-TDKSVRVWKIQE  304 (454)
Q Consensus       286 ~~l~~~~-~dg~i~i~d~~~  304 (454)
                      ..+++.. ..++|+.||+..
T Consensus       257 glla~l~RdS~tIrlydi~~  276 (783)
T KOG1008|consen  257 GLLAVLSRDSITIRLYDICV  276 (783)
T ss_pred             chhhhhccCcceEEEecccc
Confidence            3444444 457899999863

>KOG4640|consensus

Probab=97.98  E-value=4e-05  Score=71.23  Aligned_cols=92  Identities=14%  Similarity=0.148  Sum_probs=81.0

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPIT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      ..|.-+.|+|.-.++|.+..+|.|.+..++.+.+.++.-|...++ +++|.|||+.|++|-.||+|++.|+.++..+..+
T Consensus        21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~  100 (665)
T KOG4640|consen   21 INIKRIEWNPKMDLIATRTEKGELLIHRLNWQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSF  100 (665)
T ss_pred             cceEEEEEcCccchhheeccCCcEEEEEeccceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceecc
Confidence            368889999999999999999999999999999999998888888 9999999999999999999999999998877663


Q ss_pred             -eccCCceeEEEee
Q psy17902        270 -FGHQSAITSLDIL  282 (454)
Q Consensus       270 -~~~~~~v~~~~~~  282 (454)
                       ......|.++.|.
T Consensus       101 ~~s~e~~is~~~w~  114 (665)
T KOG4640|consen  101 LFSVETDISKGIWD  114 (665)
T ss_pred             ccccccchheeecc
Confidence             2355678888886

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=97.89  E-value=0.009  Score=55.07  Aligned_cols=227  Identities=8%  Similarity=0.035  Sum_probs=119.8

Q ss_pred             eCCCcEEEEec---------CCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        199 ANNNELVASGD---------NNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       199 ~~~~~~l~~~~---------~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      |||+++++...         ..+.+.|||+....+..+......+....|+|+|+.++... ++.|.++++.++...+.-
T Consensus         1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT   79 (353)
T PF00930_consen    1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLT   79 (353)
T ss_dssp             -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESE
T ss_pred             CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEec
Confidence            56777766632         24678999997777776665577889999999999998886 578999998877543221


Q ss_pred             -ec-------c---------CCceeEEEeecCCCEEEEeeCC-CcEEEeeccCCeEEEEcccc---CCeEEEEec-CCCE
Q psy17902        270 -FG-------H---------QSAITSLDILAKNRVISSGGTD-KSVRVWKIQEESQLVFNGHS---RGIDMTRRV-NDQQ  327 (454)
Q Consensus       270 -~~-------~---------~~~v~~~~~~~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~---~~i~~~~~~-~~~~  327 (454)
                       .+       -         -+.-..+-|+|++++|+....| ..|..+.+.     .+....   ..+..+..+ .|..
T Consensus        80 ~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~-----~~~~~~~~yp~~~~~~YPk~G~~  154 (353)
T PF00930_consen   80 TDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLP-----DYSPPDSQYPEVESIRYPKAGDP  154 (353)
T ss_dssp             S--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEE-----EESSSTESS-EEEEEE--BTTS-
T ss_pred             cccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEee-----ccCCccccCCcccccccCCCCCc
Confidence             12       0         1122568899999988765433 344444322     111111   112222222 1221


Q ss_pred             EEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe--cCCC---cEEEEEcCCCceeeEe
Q psy17902        328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG--SYDG---CVKLWKITPKRTLEFL  402 (454)
Q Consensus       328 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg---~v~iwd~~~~~~~~~~  402 (454)
                      ..    .-.+.|+|+.+++... +......   ......+..+.|++++..|+..  +.+.   .+.++|..++..-..+
T Consensus       155 np----~v~l~v~~~~~~~~~~-~~~~~~~---~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~  226 (353)
T PF00930_consen  155 NP----RVSLFVVDLASGKTTE-LDPPNSL---NPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVL  226 (353)
T ss_dssp             ------EEEEEEEESSSTCCCE-E---HHH---HTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEE
T ss_pred             CC----ceEEEEEECCCCcEEE-eeecccc---CCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEE
Confidence            11    1136668887765542 1111000   0124459999999999833333  2222   4677788776443222


Q ss_pred             ccCCCcee---eeEEEEc-CCCCEEEEEecCCCceeeeeeeC
Q psy17902        403 QDIPLSGV---INSLVFT-SDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       403 ~~~~~~~~---v~~l~~s-~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ... ..+.   -....|. +++..++.....+|--.++-...
T Consensus       227 ~e~-~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~  267 (353)
T PF00930_consen  227 EET-SDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDL  267 (353)
T ss_dssp             EEE-SSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEET
T ss_pred             Eec-CCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcc
Confidence            221 2222   2345554 66665555545666555554433

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.87  E-value=0.024  Score=53.15  Aligned_cols=223  Identities=12%  Similarity=0.043  Sum_probs=111.0

Q ss_pred             EEEcCCCCEEEEEeCC----------C-eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        148 IAVTSDSKHVYSACKD----------G-IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       148 ~~~s~~~~~l~~~~~d----------g-~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      ++.+|.|..||....+          . .|.||+.. +..+..+..      ..+.|.++.|+.+.. |++...||.+++
T Consensus        34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~s-G~ll~~i~w------~~~~iv~~~wt~~e~-LvvV~~dG~v~v  105 (410)
T PF04841_consen   34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSS-GKLLSSIPW------DSGRIVGMGWTDDEE-LVVVQSDGTVRV  105 (410)
T ss_pred             EEEcCCCceEEEEecCcccccccCCCCcEEEEECCC-CCEeEEEEE------CCCCEEEEEECCCCe-EEEEEcCCEEEE
Confidence            4555666556555433          2 58888876 445555543      226899999988655 556667999999


Q ss_pred             EeCCCccEEee-------cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-eEEEe---eccCC------ceeE-
Q psy17902        217 WSSSLEHLHTF-------TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-YVETL---FGHQS------AITS-  278 (454)
Q Consensus       217 w~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~---~~~~~------~v~~-  278 (454)
                      ||+.+.....+       .-....+....+..+|-.++  ..++.+.+.+-.... ....+   .....      .... 
T Consensus       106 y~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~GivvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i  183 (410)
T PF04841_consen  106 YDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGIVVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVI  183 (410)
T ss_pred             EeCCCceeechhhhccccCcccccccccccCCCCEEEE--CCCCeEEEEeCccccchhhccccCCCcccccccccccccc
Confidence            99965551111       11122233333333553333  334555444322211 11111   10000      0000 


Q ss_pred             EEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        279 LDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       279 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      ..++.+....+....++.+.+.+-.....  .......+.+..++++++++.-..+|.+.+....-.+....+....   
T Consensus       184 ~~l~~~~~~~i~~~~g~~i~~i~~~~~~~--i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~---  258 (410)
T PF04841_consen  184 PLLSSDRVVEILLANGETIYIIDENSFKQ--IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDS---  258 (410)
T ss_pred             eEeecCcceEEEEecCCEEEEEEcccccc--ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCc---
Confidence            22333344444444445555333322111  1112223345555678888888889999998876666665555431   


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                           ......|.|+-+...++.-  ...|.+..
T Consensus       259 -----~~~p~~~~WCG~dav~l~~--~~~l~lvg  285 (410)
T PF04841_consen  259 -----KSPPKQMAWCGNDAVVLSW--EDELLLVG  285 (410)
T ss_pred             -----CCCCcEEEEECCCcEEEEe--CCEEEEEC
Confidence                 1225567776554333322  23455544

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=97.86  E-value=0.017  Score=51.10  Aligned_cols=280  Identities=12%  Similarity=0.081  Sum_probs=130.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -...+..|.|.....-+++| ..|.|  +....+-...................++.|..+ ..+++|. .| +.+...+
T Consensus        15 t~~~l~dV~F~d~~~G~~VG-~~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~ivG~-~g-~ll~T~D   88 (302)
T PF14870_consen   15 TDKPLLDVAFVDPNHGWAVG-AYGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIVGE-PG-LLLHTTD   88 (302)
T ss_dssp             -SS-EEEEEESSSS-EEEEE-TTTEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEEEE-TT-EEEEESS
T ss_pred             CCCceEEEEEecCCEEEEEe-cCCEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEEcC-Cc-eEEEecC
Confidence            34578999998655555555 45643  333333222111111111111224667888654 4445553 44 3333332


Q ss_pred             -CccEEee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCC
Q psy17902        221 -LEHLHTF---TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       221 -~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                       +..=..+   ..-.+....+....++ ....++..|.|+.= .+.++.... .....+.+..+.-+++|.+++++....
T Consensus        89 gG~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~  166 (302)
T PF14870_consen   89 GGKTWERVPLSSKLPGSPFGITALGDG-SAELAGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGN  166 (302)
T ss_dssp             TTSS-EE----TT-SS-EEEEEEEETT-EEEEEETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSS
T ss_pred             CCCCcEEeecCCCCCCCeeEEEEcCCC-cEEEEcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECccc
Confidence             2221121   1223344444444444 34444555655432 233433222 334557788888899999998876655


Q ss_pred             cEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        296 SVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       296 ~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      .+.-||--...-. ........+..+-+.++..|......|.|++=+..............    .......+..++|.+
T Consensus       167 ~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~----~~~~~~~~ld~a~~~  242 (302)
T PF14870_consen  167 FYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIP----IKTNGYGILDLAYRP  242 (302)
T ss_dssp             EEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-T----TSS--S-EEEEEESS
T ss_pred             EEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCC----cccCceeeEEEEecC
Confidence            5567775433222 33445567777777777777667788888887622211111110000    001122289999999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      ++.+.|+|+. | ..+.....|+....... ....+.++.+.|.++.+-++.|  .+|.|..|
T Consensus       243 ~~~~wa~gg~-G-~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG--~~G~ll~~  301 (302)
T PF14870_consen  243 PNEIWAVGGS-G-TLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG--QDGVLLRY  301 (302)
T ss_dssp             SS-EEEEEST-T--EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE---STTEEEEE
T ss_pred             CCCEEEEeCC-c-cEEEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC--CCcEEEEe
Confidence            9887777765 4 33455666776665543 1245568899998776666665  89988877

>KOG2395|consensus

Probab=97.86  E-value=0.00019  Score=65.57  Aligned_cols=144  Identities=14%  Similarity=0.119  Sum_probs=96.7

Q ss_pred             cCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-------EEEEecCCCcEEEEeC--C
Q psy17902        151 TSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-------LVASGDNNSNIKLWSS--S  220 (454)
Q Consensus       151 s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~v~vw~~--~  220 (454)
                      ..+.++|+ ++.....++-.|++.++.+..+.+      +. .|+-+.+.|+.+       .-+.|-.+..|.-||+  .
T Consensus       342 ~~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~------~~-di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~  414 (644)
T KOG2395|consen  342 RADSNLILMDGGEQDKLYKLDIERGKIVEEWKF------ED-DINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQ  414 (644)
T ss_pred             ccccceEeeCCCCcCcceeeecccceeeeEeec------cC-CcceeeccCCcchhcccccccEEeecCCceEEeccccc
Confidence            34445554 444456778888999888877764      22 266677777643       2345666888999998  3


Q ss_pred             Cc-cEEeecccC----CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC
Q psy17902        221 LE-HLHTFTGHK----APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       221 ~~-~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                      +. .+....+|.    ....|++-..+ .++++||.+|.|++||--.......+.+...+|..|..+.+|++|+..+ +.
T Consensus       415 ~~~kl~~~q~kqy~~k~nFsc~aTT~s-G~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~t  492 (644)
T KOG2395|consen  415 GKNKLAVVQSKQYSTKNNFSCFATTES-GYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KT  492 (644)
T ss_pred             CcceeeeeeccccccccccceeeecCC-ceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-cc
Confidence            33 333333332    33455555544 4899999999999999744344456678889999999999999988554 56


Q ss_pred             cEEEeecc
Q psy17902        296 SVRVWKIQ  303 (454)
Q Consensus       296 ~i~i~d~~  303 (454)
                      .+.+.++.
T Consensus       493 yLlLi~t~  500 (644)
T KOG2395|consen  493 YLLLIDTL  500 (644)
T ss_pred             EEEEEEEe
Confidence            67666653

>KOG1897|consensus

Probab=97.82  E-value=0.045  Score=54.57  Aligned_cols=284  Identities=12%  Similarity=0.065  Sum_probs=147.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----CcEEEEec---CCCc
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NELVASGD---NNSN  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~---~dg~  213 (454)
                      ..+-..|+.+-++| +|++|+.-|.=.+-.+.+................-++|..++.-..    ...+++++   .||+
T Consensus       305 e~siassi~~L~ng-~lFvGS~~gdSqLi~L~~e~d~gsy~~ilet~~NLgPI~Dm~Vvd~d~q~q~qivtCsGa~kdgS  383 (1096)
T KOG1897|consen  305 ETSIASSINYLDNG-VLFVGSRFGDSQLIKLNTEPDVGSYVVILETFVNLGPIVDMCVVDLDRQGQGQIVTCSGAFKDGS  383 (1096)
T ss_pred             CcchhhhhhcccCc-eEEEeccCCceeeEEccccCCCCchhhhhhhcccccceeeEEEEeccccCCceEEEEeCCCCCCc
Confidence            44455666666554 8888888777677766654333222211112234568888877542    23455543   3799


Q ss_pred             EEEEeC--CCccE--EeecccCCCeEEEE--EcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CC
Q psy17902        214 IKLWSS--SLEHL--HTFTGHKAPITGLA--ISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KN  285 (454)
Q Consensus       214 v~vw~~--~~~~~--~~~~~~~~~v~~~~--~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~  285 (454)
                      +++...  .-..+  ..+.+ -..++.+.  +.++- .+|+.+- -+.-++..+...-......+.......+..+. .+
T Consensus       384 LRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~ylvlsf-~~eTrvl~i~~e~ee~~~~gf~~~~~Tif~S~i~g  461 (1096)
T KOG1897|consen  384 LRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYLVLSF-ISETRVLNISEEVEETEDPGFSTDEQTIFCSTING  461 (1096)
T ss_pred             EEEEecccccceeeEeecCC-ccceeEeeccccccCCcEEEEEe-ccceEEEEEccceEEeccccccccCceEEEEccCC
Confidence            999875  22222  23333 34566666  44322 2444443 34445555543211111222333333344332 23


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      +.|+-.. ...|++++-. +....+...........+.+...++.++.++.+...++...........  .      ...
T Consensus       462 ~~lvQvT-s~~iRl~ss~-~~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~--~------~e~  531 (1096)
T KOG1897|consen  462 NQLVQVT-SNSIRLVSSA-GLRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHK--E------FEY  531 (1096)
T ss_pred             ceEEEEe-cccEEEEcch-hhhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeh--e------ecc
Confidence            3333332 3457777655 2222333333333344444555677777777777777665542111111  1      233


Q ss_pred             cEEEEEEecCC------CEEEEecCCCcEEEEEcCCCceeeEe---ccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        366 WITSVACLHNS------DLVASGSYDGCVKLWKITPKRTLEFL---QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       366 ~i~~~~~s~~~------~~l~~~~~dg~v~iwd~~~~~~~~~~---~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      .|.|+.++|-|      +++++|.++..+.+.-....-.+...   ........|.-.+|--|..+|.++ ..||.+..+
T Consensus       532 evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlva-lgdG~l~~f  610 (1096)
T KOG1897|consen  532 EVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVA-LGDGALLYF  610 (1096)
T ss_pred             eeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccceEEEEE-cCCceEEEE
Confidence            49999999843      28899988877666554433222221   111123345566777778899988 567777655


Q ss_pred             ee
Q psy17902        437 KT  438 (454)
Q Consensus       437 ~~  438 (454)
                      -.
T Consensus       611 v~  612 (1096)
T KOG1897|consen  611 VL  612 (1096)
T ss_pred             EE
Confidence            43

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.78  E-value=0.0082  Score=51.31  Aligned_cols=161  Identities=11%  Similarity=0.204  Sum_probs=114.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -...|.++.|+|+.+.|++......-.||=...++.+.++++.     .....-.|.+..+|.++++--.++.+.++.++
T Consensus        84 ~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~-----g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          84 ETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLT-----GFSDPETIEYIGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             ccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccc-----ccCChhHeEEecCCEEEEEehhcceEEEEEEc
Confidence            4555999999999999999998888888888889999888763     23345678888899888888888999888772


Q ss_pred             C--ccEE---------eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE---eecc-------CCceeEE
Q psy17902        221 L--EHLH---------TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET---LFGH-------QSAITSL  279 (454)
Q Consensus       221 ~--~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~-------~~~v~~~  279 (454)
                      .  ..+.         .....+...-.++|.|..+.|+.+-.-.-+.||.+........   ...+       -..|.++
T Consensus       159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl  238 (316)
T COG3204         159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGL  238 (316)
T ss_pred             CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccc
Confidence            2  1111         1112256778999999999999998888788887664321111   1111       2346778


Q ss_pred             EeecC-CCEEEEeeCCCcEEEeeccCCe
Q psy17902        280 DILAK-NRVISSGGTDKSVRVWKIQEES  306 (454)
Q Consensus       280 ~~~~~-~~~l~~~~~dg~i~i~d~~~~~  306 (454)
                      .|++. +.+|+-+..++.+.-.|.....
T Consensus       239 ~~~~~~~~LLVLS~ESr~l~Evd~~G~~  266 (316)
T COG3204         239 EFNAITNSLLVLSDESRRLLEVDLSGEV  266 (316)
T ss_pred             eecCCCCcEEEEecCCceEEEEecCCCe
Confidence            88765 4666767777878777776543

>KOG4640|consensus

Probab=97.78  E-value=0.00013  Score=67.86  Aligned_cols=93  Identities=13%  Similarity=0.116  Sum_probs=77.6

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCcee-EEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT-SLDILAKNRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      -...|.-+.|+|.-..+|++..+|.|.+..++ .+.+.++.-|...++ +++|.|||+.|++|-.||+|++.|+.++..+
T Consensus        19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l   97 (665)
T KOG4640|consen   19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL   97 (665)
T ss_pred             cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence            34567889999999999999999999999998 777778876777777 9999999999999999999999999998877


Q ss_pred             EE--ccccCCeEEEEec
Q psy17902        309 VF--NGHSRGIDMTRRV  323 (454)
Q Consensus       309 ~~--~~~~~~i~~~~~~  323 (454)
                      .-  ......+.+..|+
T Consensus        98 ~~~~~s~e~~is~~~w~  114 (665)
T KOG4640|consen   98 VSFLFSVETDISKGIWD  114 (665)
T ss_pred             eccccccccchheeecc
Confidence            33  3344556666665

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.75  E-value=0.021  Score=48.77  Aligned_cols=186  Identities=11%  Similarity=0.090  Sum_probs=117.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEeecc-CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902        233 PITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLFGH-QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-  308 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-  308 (454)
                      -...+.|..++.++-+.+.-|  .|+.+|+.+++......-. .----.++... +.+....-.++...+||..+.+.+ 
T Consensus        46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl~~~~  124 (264)
T PF05096_consen   46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTLKKIG  124 (264)
T ss_dssp             EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTTEEEE
T ss_pred             cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccceEEE
Confidence            345788877888888887766  7999999999876554322 22223455553 344444567899999999988777 


Q ss_pred             EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       309 ~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                      .+.-...+ .-++ .++..|+.......|+++|..+.+....+.......    .-..++-+.|- +|.+.|-.-....|
T Consensus       125 ~~~y~~EG-WGLt-~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~----pv~~LNELE~i-~G~IyANVW~td~I  197 (264)
T PF05096_consen  125 TFPYPGEG-WGLT-SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGR----PVSNLNELEYI-NGKIYANVWQTDRI  197 (264)
T ss_dssp             EEE-SSS---EEE-ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTE----E---EEEEEEE-TTEEEEEETTSSEE
T ss_pred             EEecCCcc-eEEE-cCCCEEEEECCccceEEECCcccceEEEEEEEECCE----ECCCcEeEEEE-cCEEEEEeCCCCeE
Confidence            33222222 2222 556677777778889999998888877776553211    12236677776 67666666666778


Q ss_pred             EEEEcCCCceeeEeccC-------------CCceeeeEEEEcCCCCEEEEE
Q psy17902        389 KLWKITPKRTLEFLQDI-------------PLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~-------------~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ...|..+|.....+...             +.....+.+||.|....|+++
T Consensus       198 ~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vT  248 (264)
T PF05096_consen  198 VRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVT  248 (264)
T ss_dssp             EEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEE
T ss_pred             EEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEE
Confidence            88899998777655211             113568999999988887777

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.74  E-value=0.003  Score=45.72  Aligned_cols=101  Identities=14%  Similarity=0.218  Sum_probs=68.0

Q ss_pred             eEEEEEeC---CC-cEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        193 ILALAVAN---NN-ELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       193 v~~~~~~~---~~-~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      |++|++..   +| +.|++|+.|..|++|+-. ..+..+. ....|++++-... ..|+.+..+|+|-+|+-..  .+..
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-e~~~Ei~-e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~--RlWR   76 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-EIVAEIT-ETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQ--RLWR   76 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-cEEEEEe-cccceEEEEEcCC-CEEEEEecCCEEEEEeCcc--eeee
Confidence            55666554   32 579999999999999843 4444444 4467777776655 6799999999999998632  3334


Q ss_pred             eeccCCceeEEEeecC---C-CEEEEeeCCCcEEE
Q psy17902        269 LFGHQSAITSLDILAK---N-RVISSGGTDKSVRV  299 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~---~-~~l~~~~~dg~i~i  299 (454)
                      .+. ...++++.+..-   | .-|++|-.+|.|-+
T Consensus        77 iKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve~  110 (111)
T PF14783_consen   77 IKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVEV  110 (111)
T ss_pred             ecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence            433 333666666532   2 36888888887743

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.73  E-value=0.015  Score=56.90  Aligned_cols=186  Identities=10%  Similarity=0.068  Sum_probs=102.5

Q ss_pred             CceEEEEEeCCCcEEEEec------CCC--cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC----------
Q psy17902        191 PPILALAVANNNELVASGD------NNS--NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND----------  252 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~------~dg--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------  252 (454)
                      ..+...+++|+|..++...      .+.  .|.+++..+.......+.  ..+.-.|+|+|..|++....          
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~~~~  427 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVIRDP  427 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEeccC
Confidence            3678899999999887765      233  455555544332222322  37788999998877777532          


Q ss_pred             --CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE---eeccCCeEEE-----Ecc-ccCCeEEEE
Q psy17902        253 --RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV---WKIQEESQLV-----FNG-HSRGIDMTR  321 (454)
Q Consensus       253 --g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i---~d~~~~~~~~-----~~~-~~~~i~~~~  321 (454)
                        +.+.+.++..+....   ...+.|..+.|+|||..|+... ++.|++   -....+....     +.. .......+.
T Consensus       428 ~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~  503 (591)
T PRK13616        428 ATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLD  503 (591)
T ss_pred             CCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccce
Confidence              233333443333221   2356799999999999877655 577776   3333343111     111 222235566


Q ss_pred             ecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902        322 RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL  390 (454)
Q Consensus       322 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  390 (454)
                      |..+..|+++..++...+|.+.-.-.........      .....+..++-+++  -|+.+..+|.+.+
T Consensus       504 W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~------n~~~~v~~vaa~~~--~iyv~~~~g~~~l  564 (591)
T PRK13616        504 WRTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSR------NLSAPVVAVAASPS--TVYVTDARAVLQL  564 (591)
T ss_pred             EecCCEEEEEecCCCCceEEEecCCccccccCCC------CccCceEEEecCCc--eEEEEcCCceEEe
Confidence            7776667777766655556543222221110000      01233667776653  4555666663333

>KOG2444|consensus

Probab=97.72  E-value=6.4e-05  Score=61.18  Aligned_cols=143  Identities=15%  Similarity=0.227  Sum_probs=85.6

Q ss_pred             EEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      .+...+.+|.|+-++++..+..  .-..+...  ....--+..+++|+.+|.|.+|.............. .      ..
T Consensus        32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~--~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s-~------~e  102 (238)
T KOG2444|consen   32 LLRATSADGLVRERKVRKHKESCRSERFIDEG--QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCS-G------EE  102 (238)
T ss_pred             hhccccCCcccccchhhhhhhhhhhhhhhhcc--eeecccCceEEeecccceEEEecCCccchHHHhhhc-c------cc
Confidence            4445678888888888764433  11111111  222224567899999999999988632211111100 0      01


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCc-eeeeEEEEcCCCCEEEEE-ecCCCceeeeeeeC
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLS-GVINSLVFTSDHKHLVAG-IGTEHRFGRWKTIK  440 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~v~~l~~s~d~~~l~~~-~~~d~~i~~W~~~~  440 (454)
                      .....+.--.++.+..+++.||.|+.|++..++.+.....  |. .++..+..+..+++|+.+ .+.|..+..|++.+
T Consensus       103 ~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~--h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  103 SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQ--HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             cceeccccccccceeEEeccCCceeeeccccCceeeeecc--ccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence            1122222233555889999999999999998888877765  44 455555555556666544 35677778887643

>smart00320 WD40 WD40 repeats

Probab=97.71  E-value=0.00011  Score=42.22  Aligned_cols=36  Identities=33%  Similarity=0.553  Sum_probs=32.0

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWL  170 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd  170 (454)
                      ...+..  |...|.++.|++.+.++++++.||.+++|+
T Consensus         5 ~~~~~~--~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        5 LKTLKG--HTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEe--cCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            445566  999999999999999999999999999995

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=97.70  E-value=0.0038  Score=45.25  Aligned_cols=100  Identities=12%  Similarity=0.134  Sum_probs=68.2

Q ss_pred             eEEEEEcC---C-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        145 ITCIAVTS---D-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       145 V~~~~~s~---~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |++|++..   + .+.|++|+.|..|++|+-+.  .+..+.       ....|++++-... ..++.+..+|+|-+|+- 
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--~~~Ei~-------e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~-   70 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--IVAEIT-------ETDKVTSLCSLGG-GRFAYALANGTVGVYDR-   70 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--EEEEEe-------cccceEEEEEcCC-CEEEEEecCCEEEEEeC-
Confidence            67777754   2 36899999999999997553  333333       4457888887766 56888999999999985 


Q ss_pred             CccEEeecccCCCeEEEEEcC-CC---CEEEEEeCCCcEE
Q psy17902        221 LEHLHTFTGHKAPITGLAISF-EC---DTLYSSSNDRSIK  256 (454)
Q Consensus       221 ~~~~~~~~~~~~~v~~~~~~~-~~---~~l~~~~~dg~i~  256 (454)
                      ...+...+... .++++++.. ++   ..|++|-.+|.|-
T Consensus        71 ~~RlWRiKSK~-~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   71 SQRLWRIKSKN-QVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             cceeeeeccCC-CeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            33344444333 356666543 32   3788888888764

>KOG2079|consensus

Probab=97.70  E-value=0.00089  Score=66.49  Aligned_cols=101  Identities=17%  Similarity=0.342  Sum_probs=73.8

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      .+..++.|+..|.+-..|....-.     .........++|++++|+.+|.+++.|-.+|.|.+||+ .++.++.+..|.
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~nL~-----~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~  172 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTGNLG-----PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHG  172 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhcccc-----hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecC
Confidence            446788899889998887765311     11112245679999999999999999999999999999 567777777776


Q ss_pred             CCeEEEEE---cCCCCEEEEEeCCCcEEEEeC
Q psy17902        232 APITGLAI---SFECDTLYSSSNDRSIKVWNI  260 (454)
Q Consensus       232 ~~v~~~~~---~~~~~~l~~~~~dg~i~iwd~  260 (454)
                      .+.+++-+   ..++..++++...|.  +|.+
T Consensus       173 ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l  202 (1206)
T KOG2079|consen  173 APVTGVIFVGRTSQNSKLLTSDTGGS--FWKL  202 (1206)
T ss_pred             CccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence            66655544   345567888888776  4543

>PHA02713 hypothetical protein; Provisional

Probab=97.69  E-value=0.0085  Score=58.65  Aligned_cols=182  Identities=9%  Similarity=0.097  Sum_probs=95.4

Q ss_pred             CCcEEEEecCC------CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCceeE
Q psy17902        201 NNELVASGDNN------SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDRAYV  266 (454)
Q Consensus       201 ~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~  266 (454)
                      ++.+.++|+.+      ..+..||.....-..+..   ..... +++ .-++...+.||.++     .+..||..+.+..
T Consensus       303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~  380 (557)
T PHA02713        303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKWK  380 (557)
T ss_pred             CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeEE
Confidence            66777777753      346778873332222221   11111 222 22577778888754     4788998876432


Q ss_pred             E--EeeccCCceeEEEeecCCCEEEEeeCCC-----------------------cEEEeeccCCeEEEEccc--cCCeEE
Q psy17902        267 E--TLFGHQSAITSLDILAKNRVISSGGTDK-----------------------SVRVWKIQEESQLVFNGH--SRGIDM  319 (454)
Q Consensus       267 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------~i~i~d~~~~~~~~~~~~--~~~i~~  319 (454)
                      .  .+.........+.  -++.+.+.|+.++                       .+..||..+.+-.....-  ...-..
T Consensus       381 ~~~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~  458 (557)
T PHA02713        381 MLPDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPG  458 (557)
T ss_pred             ECCCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCc
Confidence            2  1111111111222  2577777777552                       477788877655422211  111123


Q ss_pred             EEecCCCEEEEEeCC------CCEEEEecCC-Cc--cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--cE
Q psy17902        320 TRRVNDQQFITCGED------GTLSLWSILK-KV--PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--CV  388 (454)
Q Consensus       320 ~~~~~~~~l~~~~~d------g~i~iwd~~~-~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~v  388 (454)
                      +...++..++.|+.+      ..+..||..+ .+  .+..++...         .....+.+  ++.+.++|+.+|  ++
T Consensus       459 ~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r---------~~~~~~~~--~~~iyv~Gg~~~~~~~  527 (557)
T PHA02713        459 VVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRL---------SALHTILH--DNTIMMLHCYESYMLQ  527 (557)
T ss_pred             EEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCccc---------ccceeEEE--CCEEEEEeeecceeeh
Confidence            445566777777754      2366788876 32  222221111         00222222  778888999888  77


Q ss_pred             EEEEcCCCc
Q psy17902        389 KLWKITPKR  397 (454)
Q Consensus       389 ~iwd~~~~~  397 (454)
                      ..||..+.+
T Consensus       528 e~yd~~~~~  536 (557)
T PHA02713        528 DTFNVYTYE  536 (557)
T ss_pred             hhcCccccc
Confidence            788877664

>PRK13616 lipoprotein LpqB; Provisional

Probab=97.64  E-value=0.0065  Score=59.36  Aligned_cols=148  Identities=15%  Similarity=0.133  Sum_probs=86.5

Q ss_pred             CCeEEEEEcCCCCEEEEEe------CCC--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---
Q psy17902        143 ASITCIAVTSDSKHVYSAC------KDG--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---  211 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~------~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---  211 (454)
                      ..+...+++|+|+.++...      .|+  .|.+++....  ...+.       .......-.|+|+|..|++....   
T Consensus       350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~--~~~lt-------~g~~~t~PsWspDG~~lw~v~dg~~~  420 (591)
T PRK13616        350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV--AVQVL-------EGHSLTRPSWSLDADAVWVVVDGNTV  420 (591)
T ss_pred             cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc--ceeee-------cCCCCCCceECCCCCceEEEecCcce
Confidence            4678999999999887765      244  4444454221  11111       11136677899998877776532   


Q ss_pred             ---------CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEE---EeCCCcee-E---EEee-ccCC
Q psy17902        212 ---------SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV---WNIEDRAY-V---ETLF-GHQS  274 (454)
Q Consensus       212 ---------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i---wd~~~~~~-~---~~~~-~~~~  274 (454)
                               +.+.+..+.+.....  ...+.|..+.|+|||..++... +|.|++   -....+.. +   ..+. ....
T Consensus       421 ~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~  497 (591)
T PRK13616        421 VRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGD  497 (591)
T ss_pred             EEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCC
Confidence                     223333332222221  3356799999999999888766 477777   44344431 1   1121 2333


Q ss_pred             ceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        275 AITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       275 ~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      .+.++.|.+++.++ ++..++...+|.+.
T Consensus       498 ~~~~l~W~~~~~L~-V~~~~~~~~v~~v~  525 (591)
T PRK13616        498 TAVSLDWRTGDSLV-VGRSDPEHPVWYVN  525 (591)
T ss_pred             ccccceEecCCEEE-EEecCCCCceEEEe
Confidence            46889999888855 45555544455443

>smart00320 WD40 WD40 repeats

Probab=97.63  E-value=0.0002  Score=41.17  Aligned_cols=38  Identities=24%  Similarity=0.570  Sum_probs=33.6

Q ss_pred             eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        264 AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      .++..+..|...|.++.|++.+.++++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            45566778889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.63  E-value=0.0053  Score=52.04  Aligned_cols=228  Identities=14%  Similarity=0.115  Sum_probs=128.7

Q ss_pred             EEEEEcCCC-CEEEEEeCCCe-EEEEEcCCCceecccCCcc--cCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEE
Q psy17902        146 TCIAVTSDS-KHVYSACKDGI-IIKWLLETRSKVCSSPFVK--TDRKSYPPILALAVANNNELVASGDNN-----SNIKL  216 (454)
Q Consensus       146 ~~~~~s~~~-~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~v  216 (454)
                      ..|+|+|.. .-++.+-.-|+ ..++|.........+....  ...+|      =.|||+|.+|+..-.|     |.|-|
T Consensus        71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGH------Gvfs~dG~~LYATEndfd~~rGViGv  144 (366)
T COG3490          71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGH------GVFSPDGRLLYATENDFDPNRGVIGV  144 (366)
T ss_pred             CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecc------cccCCCCcEEEeecCCCCCCCceEEE
Confidence            356777753 34555555554 4678888766655443211  11223      3589999999887543     78999


Q ss_pred             EeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeC------------------CCcEEEEeCCCceeEEE--ee--cc
Q psy17902        217 WSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSN------------------DRSIKVWNIEDRAYVET--LF--GH  272 (454)
Q Consensus       217 w~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------dg~i~iwd~~~~~~~~~--~~--~~  272 (454)
                      ||.  ....+-.+..|.-....+.|.+||..++.+..                  .-.+.+.|..++..+..  +.  .+
T Consensus       145 Yd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~  224 (366)
T COG3490         145 YDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLR  224 (366)
T ss_pred             EecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhh
Confidence            998  44556677788878888999999999887642                  01223334334443322  11  24


Q ss_pred             CCceeEEEeecCCCEEEEeeCCCc-----EEEeeccCCeEEEEcc--------ccCCeEEEEec-CCCEEEEEe-CCCCE
Q psy17902        273 QSAITSLDILAKNRVISSGGTDKS-----VRVWKIQEESQLVFNG--------HSRGIDMTRRV-NDQQFITCG-EDGTL  337 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~--------~~~~i~~~~~~-~~~~l~~~~-~dg~i  337 (454)
                      ...|..++..++|...+.+-..|.     ..+=-...++.+.+..        ....+.++... ....++..+ ..+..
T Consensus       225 ~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~  304 (366)
T COG3490         225 QLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRA  304 (366)
T ss_pred             hcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeE
Confidence            456777888777776654433221     1111111222221111        11223333333 234444444 45567


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      .+||..++..+.......           ...++  +...-+++.+.+|.+.++.
T Consensus       305 vi~da~tG~vv~~a~l~d-----------aaGva--~~~~gf~vssg~G~~~~~s  346 (366)
T COG3490         305 VIWDAATGAVVSEAALPD-----------AAGVA--AAKGGFAVSSGQGRIIFYS  346 (366)
T ss_pred             EEEEcCCCcEEecccccc-----------cccce--eccCceEEecCCceEEecc
Confidence            889999998777655422           22233  3444567777788888874

>KOG4441|consensus

Probab=97.62  E-value=0.02  Score=55.98  Aligned_cols=228  Identities=14%  Similarity=0.160  Sum_probs=121.1

Q ss_pred             cCCCCEEEEEeCCC------eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-C-----cEEEEe
Q psy17902        151 TSDSKHVYSACKDG------IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-S-----NIKLWS  218 (454)
Q Consensus       151 s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g-----~v~vw~  218 (454)
                      +..+.+++.|+..+      .+..||..+..-.......     ....-.++++. ++.+.++|+.+ |     .+..||
T Consensus       282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-----~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD  355 (571)
T KOG4441|consen  282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-----SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYD  355 (571)
T ss_pred             CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-----cccccccEEEE-CCEEEEEccccCCCcccceEEEec
Confidence            33456777777763      6778888776444333321     22223344444 45778888888 3     566777


Q ss_pred             CCCcc---EEeecccCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEeCCCceeEEEeeccCCceeEEEe-ecCCCEEE
Q psy17902        219 SSLEH---LHTFTGHKAPITGLAISFECDTLYSSSNDRS-----IKVWNIEDRAYVETLFGHQSAITSLDI-LAKNRVIS  289 (454)
Q Consensus       219 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~  289 (454)
                      .....   +..+...........  -+|...++|+.||.     |-.||..+.+.-.. ........+... .-+|.+.+
T Consensus       356 ~~~~~W~~~a~M~~~R~~~~v~~--l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~v-a~m~~~r~~~gv~~~~g~iYi  432 (571)
T KOG4441|consen  356 PRTNQWTPVAPMNTKRSDFGVAV--LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPV-APMLTRRSGHGVAVLGGKLYI  432 (571)
T ss_pred             CCCCceeccCCccCccccceeEE--ECCEEEEEeccccccccccEEEecCCCCccccc-CCCCcceeeeEEEEECCEEEE
Confidence            63222   222222222222222  25788889998874     67788776543211 111112222221 22577777


Q ss_pred             EeeCCC------cEEEeeccCCeEEEEcc--ccCCeEEEEecCCCEEEEEeCCCC-----EEEEecCCCccceeeecccC
Q psy17902        290 SGGTDK------SVRVWKIQEESQLVFNG--HSRGIDMTRRVNDQQFITCGEDGT-----LSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       290 ~~~~dg------~i~i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~  356 (454)
                      +|+.++      ++..||..++.......  .......+...++..++.|+.|+.     |..||..+.+-...-.....
T Consensus       433 ~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~  512 (571)
T KOG4441|consen  433 IGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSP  512 (571)
T ss_pred             EcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccc
Confidence            887554      56788888776552211  111122355567788888887763     67788766544333221111


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPK  396 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~  396 (454)
                      .       ..+....  -++.+.++|+.||     +|..||..++
T Consensus       513 r-------s~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d  548 (571)
T KOG4441|consen  513 R-------SAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETD  548 (571)
T ss_pred             c-------ccccEEE--ECCEEEEEecccCccccceeEEcCCCCC
Confidence            0       0011122  2566778888776     4666665554

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.62  E-value=0.019  Score=52.39  Aligned_cols=228  Identities=11%  Similarity=0.055  Sum_probs=99.7

Q ss_pred             CCcEEEEec-CCCcEEEEeCCC-----ccEEeecc---cC----CCeEEEEEcCCCCEEEEEeC------CCcEEEEeCC
Q psy17902        201 NNELVASGD-NNSNIKLWSSSL-----EHLHTFTG---HK----APITGLAISFECDTLYSSSN------DRSIKVWNIE  261 (454)
Q Consensus       201 ~~~~l~~~~-~dg~v~vw~~~~-----~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~  261 (454)
                      ..++|+..+ .++.|+|+|+..     +..+.+..   +.    .....+...|+|..++++-.      -|-+.++|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            355666655 678999999832     11222221   11    12233445678888887532      3468888988


Q ss_pred             CceeEEEeecc---CCceeEEEeecCCCEEEEee--------------------CCCcEEEeeccCCeEEEEcccc--C-
Q psy17902        262 DRAYVETLFGH---QSAITSLDILAKNRVISSGG--------------------TDKSVRVWKIQEESQLVFNGHS--R-  315 (454)
Q Consensus       262 ~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~--------------------~dg~i~i~d~~~~~~~~~~~~~--~-  315 (454)
                      +..........   ...-..+-|.|..+.++|..                    ...++.+||+.+.+.+......  + 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~  245 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ  245 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence            87777666432   23346677888888888753                    2457999999998887333222  1 


Q ss_pred             -C--eEEEEecCCCE-EEEEeCCCCEEEEec-CCCc----cceeeecccC-CCCCC-------CCCCcEEEEEEecCCCE
Q psy17902        316 -G--IDMTRRVNDQQ-FITCGEDGTLSLWSI-LKKV----PTHTIPVAHG-YDSSS-------SEPNWITSVACLHNSDL  378 (454)
Q Consensus       316 -~--i~~~~~~~~~~-l~~~~~dg~i~iwd~-~~~~----~~~~~~~~~~-~~~~~-------~~~~~i~~~~~s~~~~~  378 (454)
                       +  |..+.-+...+ |+.+.-.++|..|-- ..+.    .+..++.... .....       ..+.-|+.|.+|.|.++
T Consensus       246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrf  325 (461)
T PF05694_consen  246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRF  325 (461)
T ss_dssp             EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-E
T ss_pred             ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCE
Confidence             2  22222233333 333334444544433 2221    1111111100 00000       01344899999999998


Q ss_pred             EEEec-CCCcEEEEEcCCCc---eeeEec--------------cCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        379 VASGS-YDGCVKLWKITPKR---TLEFLQ--------------DIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       379 l~~~~-~dg~v~iwd~~~~~---~~~~~~--------------~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      |...+ ..|.|+.||+....   +...+.              +....+...-+..|.||+.|+++.+
T Consensus       326 LYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS  393 (461)
T PF05694_consen  326 LYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS  393 (461)
T ss_dssp             EEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred             EEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence            87766 48999999998752   222211              1112334577899999999999844

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.59  E-value=0.047  Score=48.40  Aligned_cols=227  Identities=11%  Similarity=0.076  Sum_probs=125.0

Q ss_pred             CCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE----------
Q psy17902        200 NNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET----------  268 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----------  268 (454)
                      ..++.|+.|+.+| +.+++. ......... +...|..+...++-+.|++-+ |+.++++++........          
T Consensus         5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~   81 (275)
T PF00780_consen    5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR   81 (275)
T ss_pred             cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence            3567899999888 888888 322222222 333499999999877777665 59999999876543331          


Q ss_pred             ----eeccCCceeEEE--eecCCCEEEEeeCCCcEEEeeccCC-----eEEEEccccCCeEEEEecCCCEEEEEeCCCCE
Q psy17902        269 ----LFGHQSAITSLD--ILAKNRVISSGGTDKSVRVWKIQEE-----SQLVFNGHSRGIDMTRRVNDQQFITCGEDGTL  337 (454)
Q Consensus       269 ----~~~~~~~v~~~~--~~~~~~~l~~~~~dg~i~i~d~~~~-----~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i  337 (454)
                          .......+..++  -...+...++......|.+|.....     ....-..-...+..+.+. ++.++.|..+ ..
T Consensus        82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~-~~~i~v~~~~-~f  159 (275)
T PF00780_consen   82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL-GNKICVGTSK-GF  159 (275)
T ss_pred             cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe-CCEEEEEeCC-ce
Confidence                111233444444  1123333333445568888887653     222222222444445554 5566666644 48


Q ss_pred             EEEecCCCccceeeecccCC---CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee--EeccCCCceeee
Q psy17902        338 SLWSILKKVPTHTIPVAHGY---DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE--FLQDIPLSGVIN  412 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~v~  412 (454)
                      .+.|+.++.....+......   ........++..+.. +++.+|++.  |..-.+.|. .|.+.+  .+.   -...+.
T Consensus       160 ~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~---W~~~p~  232 (275)
T PF00780_consen  160 YLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKSTIQ---WSSAPQ  232 (275)
T ss_pred             EEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccEEE---cCCchh
Confidence            88899876654443222111   000011222333333 345666653  333334443 454433  222   344566


Q ss_pred             EEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        413 SLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       413 ~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++++.  ..||++. +. +.|-+|+..++.
T Consensus       233 ~~~~~--~pyli~~-~~-~~iEV~~~~~~~  258 (275)
T PF00780_consen  233 SVAYS--SPYLIAF-SS-NSIEVRSLETGE  258 (275)
T ss_pred             EEEEE--CCEEEEE-CC-CEEEEEECcCCc
Confidence            77774  5688877 44 559999988773

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>KOG4499|consensus

Probab=97.56  E-value=0.034  Score=45.92  Aligned_cols=216  Identities=10%  Similarity=0.070  Sum_probs=110.2

Q ss_pred             cEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCC---CEEEEEeCCCcEEEEeCC--CceeEEEeec-----c
Q psy17902        203 ELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFEC---DTLYSSSNDRSIKVWNIE--DRAYVETLFG-----H  272 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~iwd~~--~~~~~~~~~~-----~  272 (454)
                      .++.+--..|.|.-||+....+....-...++.++.+--.+   .+.+.++..-.|--||..  ......++..     .
T Consensus        28 sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~k  107 (310)
T KOG4499|consen   28 SLLYVDIEAGEVHRYDIEQNKVYRAKIEGPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDRK  107 (310)
T ss_pred             eEEEEEeccCceehhhhhhhheEEEEEecCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCchHH
Confidence            34444445677777998555444433222234444443222   233333333345557633  2222233211     1


Q ss_pred             CCceeEEEeecCCCEEEEeeC-C---------CcEEEeeccCCeEEEEccccCCeEEEEecC-C-CEEEEEeCCCCEEEE
Q psy17902        273 QSAITSLDILAKNRVISSGGT-D---------KSVRVWKIQEESQLVFNGHSRGIDMTRRVN-D-QQFITCGEDGTLSLW  340 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~-d---------g~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iw  340 (454)
                      ....+.-..+|+|++++ |.. |         |.++.|-....-. .+...-...+.+.|.. . .+.++-+.+-.|.-|
T Consensus       108 knR~NDgkvdP~Gryy~-GtMad~~~~le~~~g~Ly~~~~~h~v~-~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~  185 (310)
T KOG4499|consen  108 KNRLNDGKVDPDGRYYG-GTMADFGDDLEPIGGELYSWLAGHQVE-LIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY  185 (310)
T ss_pred             hcccccCccCCCCceee-eeeccccccccccccEEEEeccCCCce-eeehhccCCccccccccCcEEEEEccCceEEeee
Confidence            34455666789998844 332 1         2333333221111 1111111112233332 2 234556667777667


Q ss_pred             e--cCCCcc-----ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902        341 S--ILKKVP-----THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS  413 (454)
Q Consensus       341 d--~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~  413 (454)
                      |  ..++..     +..+.......     ....-.++...+|++.++.-..|+|..+|..+|+.+..+..  ....|++
T Consensus       186 dyd~~tG~~snr~~i~dlrk~~~~e-----~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl--Pt~qits  258 (310)
T KOG4499|consen  186 DYDCPTGDLSNRKVIFDLRKSQPFE-----SLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKL--PTPQITS  258 (310)
T ss_pred             ecCCCcccccCcceeEEeccCCCcC-----CCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEc--CCCceEE
Confidence            7  444432     22222211111     11123455566888888888889999999999999999886  4677999


Q ss_pred             EEEcCC-CCEEEEEe
Q psy17902        414 LVFTSD-HKHLVAGI  427 (454)
Q Consensus       414 l~~s~d-~~~l~~~~  427 (454)
                      +||--. -..|++++
T Consensus       259 ccFgGkn~d~~yvT~  273 (310)
T KOG4499|consen  259 CCFGGKNLDILYVTT  273 (310)
T ss_pred             EEecCCCccEEEEEe
Confidence            999633 23455543

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.47  E-value=0.054  Score=46.20  Aligned_cols=226  Identities=14%  Similarity=0.140  Sum_probs=116.6

Q ss_pred             EEEEeCCC-cEEEEecCCCc-EEEEeC-CCccEEe--------ecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEE
Q psy17902        195 ALAVANNN-ELVASGDNNSN-IKLWSS-SLEHLHT--------FTGHKAPITGLAISFECDTLYSSSN-----DRSIKVW  258 (454)
Q Consensus       195 ~~~~~~~~-~~l~~~~~dg~-v~vw~~-~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw  258 (454)
                      .|+|+|.. .-++.+-.-|+ ..++|. ......+        |.+|.      .|||+|.+|++.-.     -|.|-||
T Consensus        72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHG------vfs~dG~~LYATEndfd~~rGViGvY  145 (366)
T COG3490          72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHG------VFSPDGRLLYATENDFDPNRGVIGVY  145 (366)
T ss_pred             CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeeccc------ccCCCCcEEEeecCCCCCCCceEEEE
Confidence            35566643 33444444443 456776 3333332        33443      68999999887643     3789999


Q ss_pred             eCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEe--------------------eccCCeEE---EEc--c
Q psy17902        259 NIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW--------------------KIQEESQL---VFN--G  312 (454)
Q Consensus       259 d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~--------------------d~~~~~~~---~~~--~  312 (454)
                      |.+.+ +.+..+..|.-....+.|.+||..++.+  +|-|..-                    |..++..+   .+.  .
T Consensus       146 d~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvva--nGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l  223 (366)
T COG3490         146 DAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVA--NGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASL  223 (366)
T ss_pred             ecccccceecccccCCcCcceeEEecCCcEEEEe--CCceecccccCccccchhhcCccEEEEeccccchhhhccCchhh
Confidence            98754 4466777888778899999999988865  3444443                    22222222   111  1


Q ss_pred             ccCCeEEEEecCCCEEEEEeC-CCC-----EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-C
Q psy17902        313 HSRGIDMTRRVNDQQFITCGE-DGT-----LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-D  385 (454)
Q Consensus       313 ~~~~i~~~~~~~~~~l~~~~~-dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d  385 (454)
                      +...+..+..-.++.++.++. .|.     -.+=-...++++.-+......  ......+|-+++.+.+..+++..+- .
T Consensus       224 ~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~--~~~~anYigsiA~n~~~glV~lTSP~G  301 (366)
T COG3490         224 RQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQ--TAAFANYIGSIAANRRDGLVALTSPRG  301 (366)
T ss_pred             hhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHH--HHHHHhhhhheeecccCCeEEEecCCC
Confidence            222233333333333333331 110     001011222333322221100  0012345788888876666665555 4


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +...+||..+|..+.......    +..++-  ...-++++ +.+|.+.++.
T Consensus       302 N~~vi~da~tG~vv~~a~l~d----aaGva~--~~~gf~vs-sg~G~~~~~s  346 (366)
T COG3490         302 NRAVIWDAATGAVVSEAALPD----AAGVAA--AKGGFAVS-SGQGRIIFYS  346 (366)
T ss_pred             CeEEEEEcCCCcEEecccccc----ccccee--ccCceEEe-cCCceEEecc
Confidence            568899999997765443211    222222  23334444 4577776553

>PHA02713 hypothetical protein; Provisional

Probab=97.44  E-value=0.028  Score=55.12  Aligned_cols=184  Identities=10%  Similarity=0.153  Sum_probs=90.9

Q ss_pred             CCCEEEEEeCC------CcEEEEeCCCceeEEEeec---cCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCCeE
Q psy17902        242 ECDTLYSSSND------RSIKVWNIEDRAYVETLFG---HQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEESQ  307 (454)
Q Consensus       242 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~  307 (454)
                      ++..+++||.+      ..+..||+.+.... .+..   ..... +++ .-++.+.+.||.++     .+..||..+..-
T Consensus       303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~-~~~~m~~~R~~~-~~~-~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W  379 (557)
T PHA02713        303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHV-ELPPMIKNRCRF-SLA-VIDDTIYAIGGQNGTNVERTIECYTMGDDKW  379 (557)
T ss_pred             CCEEEEEcCCCCCCCccceEEEEECCCCeEe-eCCCCcchhhce-eEE-EECCEEEEECCcCCCCCCceEEEEECCCCeE
Confidence            56677777753      34778898776532 2211   11111 222 22577777888764     478899887655


Q ss_pred             EEEccccCC--eEEEEecCCCEEEEEeCCC-----------------------CEEEEecCCCccceeeecccCCCCCCC
Q psy17902        308 LVFNGHSRG--IDMTRRVNDQQFITCGEDG-----------------------TLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       308 ~~~~~~~~~--i~~~~~~~~~~l~~~~~dg-----------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      .....-..+  -..+...++..++.|+.++                       .+..||..+.+-...-+.....     
T Consensus       380 ~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r-----  454 (557)
T PHA02713        380 KMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGT-----  454 (557)
T ss_pred             EECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCccc-----
Confidence            432221111  1223344666777777542                       4667777654322111111110     


Q ss_pred             CCCcEEEEEEecCCCEEEEecCC------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC--cee
Q psy17902        363 EPNWITSVACLHNSDLVASGSYD------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH--RFG  434 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~--~i~  434 (454)
                          ...-...-++.+.+.|+.+      ..|..||..+......+..++......+++.. +|+..++| |.++  .+-
T Consensus       455 ----~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~-~~~iyv~G-g~~~~~~~e  528 (557)
T PHA02713        455 ----IRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH-DNTIMMLH-CYESYMLQD  528 (557)
T ss_pred             ----ccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE-CCEEEEEe-eecceeehh
Confidence                1111122356666777654      24678998862223333333322222233332 45555555 7777  444


Q ss_pred             eeeee
Q psy17902        435 RWKTI  439 (454)
Q Consensus       435 ~W~~~  439 (454)
                      .+|..
T Consensus       529 ~yd~~  533 (557)
T PHA02713        529 TFNVY  533 (557)
T ss_pred             hcCcc
Confidence            44443

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.44  E-value=0.079  Score=47.25  Aligned_cols=223  Identities=8%  Similarity=0.003  Sum_probs=121.3

Q ss_pred             EEeCCCc-EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec----
Q psy17902        197 AVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG----  271 (454)
Q Consensus       197 ~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----  271 (454)
                      .|.++.. ++.+--..+.|.-|+........+... +.+.++.....+..|+++. .| +.++++.++..+..+..    
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p-~~~~~~~~~d~~g~Lv~~~-~g-~~~~~~~~~~~~t~~~~~~~~  107 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSP-GGFSSGALIDAGGRLIACE-HG-VRLLDPDTGGKITLLAEPEDG  107 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECC-CCcccceeecCCCeEEEEc-cc-cEEEeccCCceeEEeccccCC
Confidence            3555555 344444567888888754445555433 3344544444444555543 33 66777766655333321    


Q ss_pred             -cCCceeEEEeecCCCEEEEeeC-----------CCcEEEeeccCCeEE-EEccccCCeEEEEe-cCCCEEEEEe-CCCC
Q psy17902        272 -HQSAITSLDILAKNRVISSGGT-----------DKSVRVWKIQEESQL-VFNGHSRGIDMTRR-VNDQQFITCG-EDGT  336 (454)
Q Consensus       272 -~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~-~~~~~l~~~~-~dg~  336 (454)
                       .....+.+...|+|.+-++...           -|.|+.+|. .+... ....+-..-+.+.| +++..|+.+. ..+.
T Consensus       108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~  186 (307)
T COG3386         108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANR  186 (307)
T ss_pred             CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCe
Confidence             1234567788888877665433           133444443 23333 33332333334444 4554555544 4578


Q ss_pred             EEEEecCC--CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-cEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902        337 LSLWSILK--KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-CVKLWKITPKRTLEFLQDIPLSGVINS  413 (454)
Q Consensus       337 i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~  413 (454)
                      |.-|++..  +..........    ....++..-.++...+|.+-+++..+| .|.+|+.. ++++..+..  ....+++
T Consensus       187 i~r~~~d~~~g~~~~~~~~~~----~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~l--P~~~~t~  259 (307)
T COG3386         187 IHRYDLDPATGPIGGRRGFVD----FDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKL--PVKRPTN  259 (307)
T ss_pred             EEEEecCcccCccCCcceEEE----ccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEEC--CCCCCcc
Confidence            88887752  11111100000    001223356677888888775555554 89999988 888888875  3366888


Q ss_pred             EEEc-CCCCEEEEEecCC
Q psy17902        414 LVFT-SDHKHLVAGIGTE  430 (454)
Q Consensus       414 l~~s-~d~~~l~~~~~~d  430 (454)
                      ++|- |+.+.|++++...
T Consensus       260 ~~FgG~~~~~L~iTs~~~  277 (307)
T COG3386         260 PAFGGPDLNTLYITSARS  277 (307)
T ss_pred             ceEeCCCcCEEEEEecCC
Confidence            8885 5567776664433

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=97.39  E-value=0.13  Score=48.68  Aligned_cols=120  Identities=7%  Similarity=0.009  Sum_probs=73.4

Q ss_pred             CCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCce-----ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        143 ASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSK-----VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       143 ~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ..|..++|.|-    ..-|++......|.||.+.....     +....... .....--...+.|+|....|++-.....
T Consensus        57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi-~e~~pvLpQGCVWHPk~~iL~VLT~~dv  135 (671)
T PF15390_consen   57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEI-REPFPVLPQGCVWHPKKAILTVLTARDV  135 (671)
T ss_pred             ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeec-cCCcccCCCcccccCCCceEEEEecCce
Confidence            34899999984    33455556678999998763211     11100000 0011112345789999988887766555


Q ss_pred             EEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCc
Q psy17902        214 IKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDR  263 (454)
Q Consensus       214 v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~  263 (454)
                      -.++++  +...+..-....+.|.|.+|.+||+.|+++-. .=.-++||-...
T Consensus       136 SV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK  188 (671)
T PF15390_consen  136 SVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK  188 (671)
T ss_pred             eEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence            456666  44444433356788999999999998877643 335678885543

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=97.38  E-value=0.092  Score=46.84  Aligned_cols=212  Identities=11%  Similarity=0.064  Sum_probs=117.1

Q ss_pred             EEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE
Q psy17902        148 IAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLH  225 (454)
Q Consensus       148 ~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~  225 (454)
                      -.|.++.. ++++--..+.|.-|+..++..... .       ....+.++..-..+..|+++.  ..+.+++. .+..+.
T Consensus        30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~-~-------~p~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t   99 (307)
T COG3386          30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRVF-P-------SPGGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKIT   99 (307)
T ss_pred             ccCcCCCCEEEEEeCCCCeEEEecCCcCceEEE-E-------CCCCcccceeecCCCeEEEEc--cccEEEeccCCceeE
Confidence            35677666 555556678899998875533221 1       222344444444444555554  34556665 222212


Q ss_pred             eec----c-cCCCeEEEEEcCCCCEEEEEeC-----------CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        226 TFT----G-HKAPITGLAISFECDTLYSSSN-----------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       226 ~~~----~-~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      .+.    + .....+.+...|+|.+.++...           -|.|+.+|. .+..+..+..+-..-+.|+|+|+++.|+
T Consensus       100 ~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly  178 (307)
T COG3386         100 LLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLY  178 (307)
T ss_pred             EeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEE
Confidence            221    1 1234567788888876665433           133444454 4555555555556668999999998776


Q ss_pred             EeeC-CCcEEEeeccC--C----eE--EEEccccCCeE-EEEecCCCEEEEEeCCC-CEEEEecCCCccceeeecccCCC
Q psy17902        290 SGGT-DKSVRVWKIQE--E----SQ--LVFNGHSRGID-MTRRVNDQQFITCGEDG-TLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       290 ~~~~-dg~i~i~d~~~--~----~~--~~~~~~~~~i~-~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      .+.. .+.|.-|++..  +    ..  ..+....+... +..-.++.+.+++..+| .|.+|+.. ++.+..+...... 
T Consensus       179 ~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~-  256 (307)
T COG3386         179 VADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKR-  256 (307)
T ss_pred             EEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCC-
Confidence            6654 47788887752  1    11  11111122222 23333455554444444 89999988 8888888765422 


Q ss_pred             CCCCCCCcEEEEEEe-cCCCEEE
Q psy17902        359 SSSSEPNWITSVACL-HNSDLVA  380 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s-~~~~~l~  380 (454)
                              +++++|- |+.+.|+
T Consensus       257 --------~t~~~FgG~~~~~L~  271 (307)
T COG3386         257 --------PTNPAFGGPDLNTLY  271 (307)
T ss_pred             --------CccceEeCCCcCEEE
Confidence                    6777774 3334333

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.37  E-value=0.18  Score=50.97  Aligned_cols=243  Identities=8%  Similarity=-0.006  Sum_probs=127.7

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCC--CceEEEEEe----------------CCCcEEEEecCCCcEE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY--PPILALAVA----------------NNNELVASGDNNSNIK  215 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~----------------~~~~~l~~~~~dg~v~  215 (454)
                      +..|+.++.++.|.-.|..+++.+..+..........  .....+++.                ..+..|+.++.|+.+.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            5677788888889989998888877665422111000  001112221                1344788888899999


Q ss_pred             EEeC-CCccEEeecccCCCeE-------------EEEEcC--CCCEEEEEeC----------CCcEEEEeCCCceeEEEe
Q psy17902        216 LWSS-SLEHLHTFTGHKAPIT-------------GLAISF--ECDTLYSSSN----------DRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       216 vw~~-~~~~~~~~~~~~~~v~-------------~~~~~~--~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~  269 (454)
                      -.|. +++.+..+.. .+.|.             .+.-.|  .+..+++|+.          +|.|+-+|+.+|+.+..+
T Consensus       274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~  352 (764)
T TIGR03074       274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW  352 (764)
T ss_pred             EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence            9998 6776665532 22110             111112  1346666643          688999999999998877


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCC-cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDK-SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ..-.......  .+.+.....++.+. ...-+|...+....-.+...+-   .+............++|.-.|+.+++..
T Consensus       353 ~~g~p~~~~~--~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd---~~g~~r~~~~n~y~~slvALD~~TGk~~  427 (764)
T TIGR03074       353 DPGNPDPTAP--PAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPD---QWGGDRTPADEKYSSSLVALDATTGKER  427 (764)
T ss_pred             ecCCCCcccC--CCCCCEeccCCCCccCceEEcCCCCeEEEeCCCcccc---ccCCccccCcccccceEEEEeCCCCceE
Confidence            5211111111  11233222222221 3344455544433222221110   0000000111123556777888888888


Q ss_pred             eeeecccC-CCCCCCCCCcEEEEEEec-CCC---EEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        349 HTIPVAHG-YDSSSSEPNWITSVACLH-NSD---LVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       349 ~~~~~~~~-~~~~~~~~~~i~~~~~s~-~~~---~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      ..++..+. .-... -.....-+.+.. +|+   .++.++.+|.+.++|-.+|+.+....
T Consensus       428 W~~Q~~~hD~WD~D-~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~  486 (764)
T TIGR03074       428 WVFQTVHHDLWDMD-VPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE  486 (764)
T ss_pred             EEecccCCcccccc-ccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence            77765331 10000 011122222333 553   89999999999999999998776543

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>KOG2395|consensus

Probab=97.31  E-value=0.0053  Score=56.48  Aligned_cols=141  Identities=13%  Similarity=0.121  Sum_probs=95.1

Q ss_pred             CCCEEE-EEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC-------EEEEeeCCCcEEEeeccCCeE--E-EE
Q psy17902        242 ECDTLY-SSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR-------VISSGGTDKSVRVWKIQEESQ--L-VF  310 (454)
Q Consensus       242 ~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~i~d~~~~~~--~-~~  310 (454)
                      +.++|+ ++..-..++-.|++.|+.+..+.-+.. |+-+.+.|+.+       .-+.|-.+..|.-||.+-...  + ..
T Consensus       344 dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~  422 (644)
T KOG2395|consen  344 DSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVV  422 (644)
T ss_pred             ccceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeee
Confidence            344443 455556789999999999998876655 77777877643       123466788999999885332  1 22


Q ss_pred             ccc----cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        311 NGH----SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       311 ~~~----~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      ..|    .....|.....++++++||.+|.|++||- .+..-.+.-..        -..+|..+..+.+|.+|++.+ +.
T Consensus       423 q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPg--------LG~~I~hVdvtadGKwil~Tc-~t  492 (644)
T KOG2395|consen  423 QSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPG--------LGDAIKHVDVTADGKWILATC-KT  492 (644)
T ss_pred             eccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccc--------cCCceeeEEeeccCcEEEEec-cc
Confidence            222    22346677778899999999999999997 33332222211        233499999999999887665 44


Q ss_pred             cEEEEEc
Q psy17902        387 CVKLWKI  393 (454)
Q Consensus       387 ~v~iwd~  393 (454)
                      ++.+.++
T Consensus       493 yLlLi~t  499 (644)
T KOG2395|consen  493 YLLLIDT  499 (644)
T ss_pred             EEEEEEE
Confidence            6666665

>KOG4441|consensus

Probab=97.25  E-value=0.033  Score=54.55  Aligned_cols=185  Identities=16%  Similarity=0.237  Sum_probs=101.8

Q ss_pred             CCCcEEEEecCC------CcEEEEeCCCcc---EEeecccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCce
Q psy17902        200 NNNELVASGDNN------SNIKLWSSSLEH---LHTFTGHKAPITGLAISFECDTLYSSSND------RSIKVWNIEDRA  264 (454)
Q Consensus       200 ~~~~~l~~~~~d------g~v~vw~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~  264 (454)
                      ..+.+++.|+..      ..+..||.....   +..+. +...-.+++.. ++...++|+.|      .++..||..+.+
T Consensus       283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~  360 (571)
T KOG4441|consen  283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ  360 (571)
T ss_pred             CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc
Confidence            345566677665      356777773332   12222 22223444444 45788888888      357788888776


Q ss_pred             eEE--EeeccCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCCeEEEEccc--cCCeEEEEecCCCEEEEEeCCC
Q psy17902        265 YVE--TLFGHQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEESQLVFNGH--SRGIDMTRRVNDQQFITCGEDG  335 (454)
Q Consensus       265 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~dg  335 (454)
                      ...  .+........ ++. -+|.+.++|+.||     +|-.||..+.+-......  ...-..+....+...++|+.++
T Consensus       361 W~~~a~M~~~R~~~~-v~~-l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~  438 (571)
T KOG4441|consen  361 WTPVAPMNTKRSDFG-VAV-LDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDG  438 (571)
T ss_pred             eeccCCccCccccce-eEE-ECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCC
Confidence            332  1111111111 221 2577888899886     477788877655432222  1222344455677778888544


Q ss_pred             ------CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc-----EEEEEcCCCc
Q psy17902        336 ------TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC-----VKLWKITPKR  397 (454)
Q Consensus       336 ------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-----v~iwd~~~~~  397 (454)
                            ++..||..++.-...-+......        -..++ .-++.+.++|+.|+.     |..||..+.+
T Consensus       439 ~~~~l~sve~YDP~t~~W~~~~~M~~~R~--------~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~  502 (571)
T KOG4441|consen  439 SSNCLNSVECYDPETNTWTLIAPMNTRRS--------GFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQ  502 (571)
T ss_pred             CccccceEEEEcCCCCceeecCCcccccc--------cceEE-EECCEEEEECCccCCCccceEEEEcCCCCc
Confidence                  46778877654333322222110        11122 236778888888763     7788887654

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=97.21  E-value=0.0019  Score=39.01  Aligned_cols=32  Identities=13%  Similarity=0.334  Sum_probs=29.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLE  172 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~  172 (454)
                      ....|.+++|+|...+||.|+.+|.|.++.+.
T Consensus        10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            55679999999999999999999999999983

>PRK13684 Ycf48-like protein; Provisional

Probab=97.21  E-value=0.17  Score=46.21  Aligned_cols=279  Identities=10%  Similarity=-0.009  Sum_probs=133.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLE-TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      -...+++|+|....+-+++|. +|.|  |... .++.-.......  ......+.++.|.++ ..+++| ..|.|..-.-
T Consensus        44 ~~~~l~~v~F~d~~~g~avG~-~G~i--l~T~DgG~tW~~~~~~~--~~~~~~l~~v~~~~~-~~~~~G-~~g~i~~S~D  116 (334)
T PRK13684         44 TEANLLDIAFTDPNHGWLVGS-NRTL--LETNDGGETWEERSLDL--PEENFRLISISFKGD-EGWIVG-QPSLLLHTTD  116 (334)
T ss_pred             CCCceEEEEEeCCCcEEEEEC-CCEE--EEEcCCCCCceECccCC--cccccceeeeEEcCC-cEEEeC-CCceEEEECC
Confidence            355789999986666666664 4543  3322 222221111100  012234777888654 344444 3444333211


Q ss_pred             CC---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCCC
Q psy17902        220 SL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       220 ~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                      .+   ..+..-.........+.....+. ++.++..|.|..= .+.++....+. .....+.++.+.|++.+++++ ..|
T Consensus       117 gG~tW~~~~~~~~~~~~~~~i~~~~~~~-~~~~g~~G~i~~S-~DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g-~~G  193 (334)
T PRK13684        117 GGKNWTRIPLSEKLPGSPYLITALGPGT-AEMATNVGAIYRT-TDGGKNWEALVEDAAGVVRNLRRSPDGKYVAVS-SRG  193 (334)
T ss_pred             CCCCCeEccCCcCCCCCceEEEEECCCc-ceeeeccceEEEE-CCCCCCceeCcCCCcceEEEEEECCCCeEEEEe-CCc
Confidence            11   11111001111222222222222 3334445544332 22333332222 234568889999988766654 556


Q ss_pred             cEEEe-eccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        296 SVRVW-KIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       296 ~i~i~-d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      .+..- +-....-. ........+..+...+++.++..+..|.+++=....+..-........     .....+..+.+.
T Consensus       194 ~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~-----~~~~~l~~v~~~  268 (334)
T PRK13684        194 NFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEI-----TNGYGYLDLAYR  268 (334)
T ss_pred             eEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCcc-----ccccceeeEEEc
Confidence            55432 21111111 222233445555555555555556677664322333322222111100     011237889999


Q ss_pred             cCCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      |++.++++| .+|.|. .....++....+.. .......+.+.|..+++.+++  |..|.|..|+-
T Consensus       269 ~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~--G~~G~il~~~~  330 (334)
T PRK13684        269 TPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL--GQRGVLLRYVG  330 (334)
T ss_pred             CCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE--CCCceEEEecC
Confidence            988766655 466444 45566666655532 112345788888877777665  48899888764

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=97.18  E-value=0.2  Score=46.57  Aligned_cols=147  Identities=14%  Similarity=0.122  Sum_probs=88.7

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-----CCcEEEEecCCCcEEEEeC---CCc--
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-----NNELVASGDNNSNIKLWSS---SLE--  222 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~v~vw~~---~~~--  222 (454)
                      +...|++|+..|.++||+......... .. .....-..+|..+..-.     +...||+ -.-..+.||.+   .+.  
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~-~l-llE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~  112 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPE-DL-LLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVE  112 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCc-cE-EEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcc
Confidence            346999999999999999854332111 00 00012345788777543     2234444 33567888876   222  


Q ss_pred             -----cEEeecccCC--CeEEEEEcC----C-CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        223 -----HLHTFTGHKA--PITGLAISF----E-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       223 -----~~~~~~~~~~--~v~~~~~~~----~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                           .+.....|.-  ....+++-|    . ..+|++-+.||.+.+|+-+.......+.. ---...+.|.+....|++
T Consensus       113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt  191 (418)
T PF14727_consen  113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVT  191 (418)
T ss_pred             cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEE
Confidence                 2222333332  223333322    2 36788899999999999876554444433 222244788888888999


Q ss_pred             eeCCCcEEEeecc
Q psy17902        291 GGTDKSVRVWKIQ  303 (454)
Q Consensus       291 ~~~dg~i~i~d~~  303 (454)
                      ++.+..+..|...
T Consensus       192 ~sss~~l~~Yky~  204 (418)
T PF14727_consen  192 ASSSWTLECYKYQ  204 (418)
T ss_pred             ecCceeEEEecHH
Confidence            9988889888753

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=97.12  E-value=0.2  Score=45.62  Aligned_cols=68  Identities=10%  Similarity=0.071  Sum_probs=43.5

Q ss_pred             cEEEEEEec-------CCCEEEEecCCCcEEEEEcCCCceeeEecc--CCCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902        366 WITSVACLH-------NSDLVASGSYDGCVKLWKITPKRTLEFLQD--IPLSGVINSLVFTSDHKHLVAGIGTEHRFG  434 (454)
Q Consensus       366 ~i~~~~~s~-------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~  434 (454)
                      .++.+.|..       .|.+|++.-..+.|....+..+..+.....  ......+.++++.|||.+.++. +.+|.|+
T Consensus       254 ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~-d~~G~iy  330 (331)
T PF07995_consen  254 APTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSD-DSDGKIY  330 (331)
T ss_dssp             -EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE--TTTTEE
T ss_pred             ccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEE-CCCCeEe
Confidence            367777764       445677766677888888875533221111  1244579999999999888877 5788774

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>KOG2444|consensus

Probab=97.10  E-value=0.0024  Score=52.30  Aligned_cols=104  Identities=11%  Similarity=0.206  Sum_probs=69.2

Q ss_pred             CCcEEEEecCCCcEEEEeCC--CccEEeecccCCCeEE-EEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC-Cce
Q psy17902        201 NNELVASGDNNSNIKLWSSS--LEHLHTFTGHKAPITG-LAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ-SAI  276 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~~--~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v  276 (454)
                      -+.-|++|+.+|.|.+|+..  +...-.+..-...|.+ |.-..++.+.++++.+|.|+.|++.-.+.+.....|. .++
T Consensus        69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~  148 (238)
T KOG2444|consen   69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG  148 (238)
T ss_pred             cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence            34568999999999999984  2222222222223322 2223355688999999999999999888877776676 555


Q ss_pred             eEEEeecCCCEEEEe--eCCCcEEEeeccC
Q psy17902        277 TSLDILAKNRVISSG--GTDKSVRVWKIQE  304 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~--~~dg~i~i~d~~~  304 (454)
                      ..+..+..+.++..+  |.|..++.|++..
T Consensus       149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~  178 (238)
T KOG2444|consen  149 EELIVVGSDEFLKIADTSHDRVLKKWNVEK  178 (238)
T ss_pred             ceeEEecCCceEEeeccccchhhhhcchhh
Confidence            555555556666666  6677777777654

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=97.09  E-value=0.16  Score=43.74  Aligned_cols=160  Identities=9%  Similarity=0.049  Sum_probs=97.0

Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE
Q psy17902        230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                      -.+-+..+.++  +++.+.+..+.-++|.|+.+......+.  ...+.-.++..  .|++..++..|.-+.+.|+.+...
T Consensus        85 ~~~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v--sGn~aYVadlddgfLivdvsdpss  160 (370)
T COG5276          85 ARDLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV--SGNYAYVADLDDGFLIVDVSDPSS  160 (370)
T ss_pred             hhhhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe--cCCEEEEeeccCcEEEEECCCCCC
Confidence            34556667776  5577777777889999998765433221  12233344444  588998888777788999987765


Q ss_pred             EEEccccCCe---EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        308 LVFNGHSRGI---DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       308 ~~~~~~~~~i---~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      ..+.+....-   +.-....+++-..+..|+-+.+.|+.......-+....       ....+.++..+++..+++....
T Consensus       161 P~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n-------~g~g~~sv~vsdnr~y~vvy~e  233 (370)
T COG5276         161 PQLAGRYALPGGDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYN-------TGPGTYSVSVSDNRAYLVVYDE  233 (370)
T ss_pred             ceeeeeeccCCCCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEEEEe-------cCCceEEEEecCCeeEEEEccc
Confidence            5443332211   11223357777778889999999997653322221111       1113788888887766666543


Q ss_pred             CCcEEEEEcCCCceeeEe
Q psy17902        385 DGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       385 dg~v~iwd~~~~~~~~~~  402 (454)
                        -+.+-|....+....+
T Consensus       234 --gvlivd~s~~ssp~~~  249 (370)
T COG5276         234 --GVLIVDVSGPSSPTVF  249 (370)
T ss_pred             --ceEEEecCCCCCceEe
Confidence              3677776655543333

>KOG3616|consensus

Probab=97.07  E-value=0.037  Score=53.46  Aligned_cols=73  Identities=16%  Similarity=0.189  Sum_probs=49.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      ....++++.-+|.+..++++..||.|++|+...........       ...+-..+.|...|  |++...|..+.-|.-+
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~-------~~~p~~nlv~tnhg--l~~~tsdrr~la~~~d   83 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE-------EAKPKENLVFTNHG--LVTATSDRRALAWKED   83 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh-------hcCCccceeeeccc--eEEEeccchhheeecc
Confidence            44568889999999999999999999999987654422111       11234456666554  5556667777777765


Q ss_pred             Cc
Q psy17902        221 LE  222 (454)
Q Consensus       221 ~~  222 (454)
                      +-
T Consensus        84 gv   85 (1636)
T KOG3616|consen   84 GV   85 (1636)
T ss_pred             Cc
Confidence            43

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=97.06  E-value=0.44  Score=48.33  Aligned_cols=199  Identities=12%  Similarity=0.054  Sum_probs=116.5

Q ss_pred             CCEEEEEeCCCcEEEEeCCCceeEEEeeccCC--------ceeEEEeec----------------CCCEEEEeeCCCcEE
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS--------AITSLDILA----------------KNRVISSGGTDKSVR  298 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------~v~~~~~~~----------------~~~~l~~~~~dg~i~  298 (454)
                      +..|+.++.++.|.-.|..+|+.+..+.....        ..+.+.+..                .+..|+.++.|+.|.
T Consensus       194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li  273 (764)
T TIGR03074       194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI  273 (764)
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence            55778888889999999999988877643211        112333321                234777888999999


Q ss_pred             EeeccCCeEEEEccccCCeE-------------EEEec---CCCEEEEEeC----------CCCEEEEecCCCccceeee
Q psy17902        299 VWKIQEESQLVFNGHSRGID-------------MTRRV---NDQQFITCGE----------DGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       299 i~d~~~~~~~~~~~~~~~i~-------------~~~~~---~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~  352 (454)
                      -.|..+++..-..+....+.             ....+   -++.+++|+.          +|.|+-+|+.+++.+..+.
T Consensus       274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~  353 (764)
T TIGR03074       274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWD  353 (764)
T ss_pred             EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEe
Confidence            99999998873222222111             01111   2556777653          6889999999999988876


Q ss_pred             cccCCCCCC---------CCCCcEEEEEEecCCCEEEEec------------------CCCcEEEEEcCCCceeeEeccC
Q psy17902        353 VAHGYDSSS---------SEPNWITSVACLHNSDLVASGS------------------YDGCVKLWKITPKRTLEFLQDI  405 (454)
Q Consensus       353 ~~~~~~~~~---------~~~~~i~~~~~s~~~~~l~~~~------------------~dg~v~iwd~~~~~~~~~~~~~  405 (454)
                      .........         ...+.=..+++++...+++.+.                  ..+.|.-.|..+|+..-.++..
T Consensus       354 ~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~  433 (764)
T TIGR03074       354 PGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTV  433 (764)
T ss_pred             cCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEeccc
Confidence            432111100         0000002345555544444322                  2356777788888777666653


Q ss_pred             CCce-------eeeEEEEcC-CCC---EEEEEecCCCceeeeeeeCCC
Q psy17902        406 PLSG-------VINSLVFTS-DHK---HLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       406 ~~~~-------~v~~l~~s~-d~~---~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|..       ...-+.+.. +|+   .++.+ +.+|.+.+.|..++.
T Consensus       434 ~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~-~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       434 HHDLWDMDVPAQPSLVDLPDADGTTVPALVAP-TKQGQIYVLDRRTGE  480 (764)
T ss_pred             CCccccccccCCceEEeeecCCCcEeeEEEEE-CCCCEEEEEECCCCC
Confidence            3321       111122322 553   45555 899999999987764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PHA03098 kelch-like protein; Provisional

Probab=97.06  E-value=0.097  Score=51.43  Aligned_cols=185  Identities=9%  Similarity=0.044  Sum_probs=90.9

Q ss_pred             CCCcEEEEecCCC------cEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCcee
Q psy17902        200 NNNELVASGDNNS------NIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAY  265 (454)
Q Consensus       200 ~~~~~l~~~~~dg------~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~  265 (454)
                      .++.+++.|+.++      .+..||.....-..+..   .......+.  -++..++.||.+     ..+..||..+.+.
T Consensus       293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W  370 (534)
T PHA03098        293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTV--FNNRIYVIGGIYNSISLNTVESWKPGESKW  370 (534)
T ss_pred             ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEE--ECCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence            3566777776542      56777874333333221   111122222  256777777765     3577888876643


Q ss_pred             EEEee-ccCCceeEEEeecCCCEEEEeeCC------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCCC-
Q psy17902        266 VETLF-GHQSAITSLDILAKNRVISSGGTD------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGEDG-  335 (454)
Q Consensus       266 ~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~dg-  335 (454)
                      ...-. .+...-.+++. -++.+.+.|+.+      ..+..||..+..-........  ...++...++..++.|+.++ 
T Consensus       371 ~~~~~lp~~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~  449 (534)
T PHA03098        371 REEPPLIFPRYNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYI  449 (534)
T ss_pred             eeCCCcCcCCccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCC
Confidence            22111 01111112222 256667777632      357889988765543221111  11233344566666666432 


Q ss_pred             -------CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902        336 -------TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK  396 (454)
Q Consensus       336 -------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~  396 (454)
                             .+.+||..+.+-...-.....      .. ....+.  -++.+++.|+.+     +.|.+||..+.
T Consensus       450 ~~~~~~~~v~~yd~~~~~W~~~~~~~~~------r~-~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        450 DNIKVYNIVESYNPVTNKWTELSSLNFP------RI-NASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             CCCcccceEEEecCCCCceeeCCCCCcc------cc-cceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence                   378888876532221111100      00 011122  267777777654     46888887765

>KOG4499|consensus

Probab=97.03  E-value=0.14  Score=42.37  Aligned_cols=210  Identities=12%  Similarity=0.103  Sum_probs=109.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC---cEEEEecCCCcEEEEeCCC---ccEEee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN---ELVASGDNNSNIKLWSSSL---EHLHTF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~v~vw~~~~---~~~~~~  227 (454)
                      +.++.+--..|.|.-||+.........-       ...++..+.+--.+   .+.+.++..-.|.-||...   ....++
T Consensus        27 ~sLl~VDi~ag~v~r~D~~qn~v~ra~i-------e~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~   99 (310)
T KOG4499|consen   27 QSLLYVDIEAGEVHRYDIEQNKVYRAKI-------EGPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTL   99 (310)
T ss_pred             ceEEEEEeccCceehhhhhhhheEEEEE-------ecCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeec
Confidence            3566665566778778887654332211       11123334443222   2333333222334466311   112221


Q ss_pred             c-----ccCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEe
Q psy17902        228 T-----GHKAPITGLAISFECDTLYSSSN----------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSG  291 (454)
Q Consensus       228 ~-----~~~~~v~~~~~~~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~  291 (454)
                      .     ......+.-..+|+|+++ .|..          .|.++.|-..  ..+..+...-.--+.++|+.+.+.+ ++-
T Consensus       100 ~ev~~d~kknR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iD  176 (310)
T KOG4499|consen  100 FEVQPDRKKNRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYID  176 (310)
T ss_pred             cccCchHHhcccccCccCCCCcee-eeeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEc
Confidence            1     123455666778999884 4432          2334444332  1122222222333678898776544 455


Q ss_pred             eCCCcEEEee--ccCCeEE----E--Ecc-----ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        292 GTDKSVRVWK--IQEESQL----V--FNG-----HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       292 ~~dg~i~i~d--~~~~~~~----~--~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      +.+-.|.-||  +.++...    .  +..     +..+=-+..-..+++++++-..++|...|..+++.+..+...... 
T Consensus       177 sln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~q-  255 (310)
T KOG4499|consen  177 SLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQ-  255 (310)
T ss_pred             cCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCc-
Confidence            6677786677  5554332    1  111     111111122336777888889999999999999999999876433 


Q ss_pred             CCCCCCCcEEEEEEec-CCCEEEEe
Q psy17902        359 SSSSEPNWITSVACLH-NSDLVASG  382 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~-~~~~l~~~  382 (454)
                              |+|++|-- +-..|++.
T Consensus       256 --------itsccFgGkn~d~~yvT  272 (310)
T KOG4499|consen  256 --------ITSCCFGGKNLDILYVT  272 (310)
T ss_pred             --------eEEEEecCCCccEEEEE
Confidence                    99999953 22344443

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=97.02  E-value=0.18  Score=43.28  Aligned_cols=189  Identities=9%  Similarity=0.032  Sum_probs=109.3

Q ss_pred             CceEEEEEeCCCcEEEEecCCC--cEEEEeC-CCccEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        191 PPILALAVANNNELVASGDNNS--NIKLWSS-SLEHLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      .-...+.|..++.++-+.+.-|  .|+.+|+ +++......- ..----.++...+ +.....=.++...+||..+.+.+
T Consensus        45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~tl~~~  123 (264)
T PF05096_consen   45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGD-KLYQLTWKEGTGFVYDPNTLKKI  123 (264)
T ss_dssp             -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETT-EEEEEESSSSEEEEEETTTTEEE
T ss_pred             ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECC-EEEEEEecCCeEEEEccccceEE
Confidence            3456788877888888887766  7888998 4444433321 1122234444422 33333346889999999999988


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccC---CeEEEEecCCCEEEEEeCCCCEEEE
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSR---GIDMTRRVNDQQFITCGEDGTLSLW  340 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~---~i~~~~~~~~~~l~~~~~dg~i~iw  340 (454)
                      .++. ..+.-..++  .++..|+.......|+++|..+.+..   .......   .++-+.+.++..++=.-....|...
T Consensus       124 ~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~IyANVW~td~I~~I  200 (264)
T PF05096_consen  124 GTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGKIYANVWQTDRIVRI  200 (264)
T ss_dssp             EEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTEEEEEETTSSEEEEE
T ss_pred             EEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCEEEEEeCCCCeEEEE
Confidence            8875 345557777  35666666666778999998776554   2222222   2344555566555545567778888


Q ss_pred             ecCCCccceeeecccCCC------CCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902        341 SILKKVPTHTIPVAHGYD------SSSSEPNWITSVACLHNSD-LVASGS  383 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~s~~~~-~l~~~~  383 (454)
                      |..++.....+....-..      .......-.+.|++.|..+ +++||-
T Consensus       201 dp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK  250 (264)
T PF05096_consen  201 DPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK  250 (264)
T ss_dssp             ETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred             eCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence            998888877665322110      0111245699999998776 455553

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=97.02  E-value=0.2  Score=43.65  Aligned_cols=144  Identities=12%  Similarity=0.021  Sum_probs=89.2

Q ss_pred             CeEEEEEcCCCCEEEEEe---CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe-C
Q psy17902        144 SITCIAVTSDSKHVYSAC---KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS-S  219 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~-~  219 (454)
                      .+.+.+++++++.+|...   ....+.++........  ..       ....+..-.|++++...++...+...+++. .
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~--~~-------~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~   95 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRP--VL-------TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDS   95 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCccee--ec-------cCCccccccccCCCCEEEEEcCCCceEEEEec
Confidence            688999999999887766   3345555544332221  11       122677778999988777777666666663 2


Q ss_pred             -CCccE-Eeecc--cCCCeEEEEEcCCCCEEEEEe---CCCcEEEEeCC---Cc------eeEEEeeccCCceeEEEeec
Q psy17902        220 -SLEHL-HTFTG--HKAPITGLAISFECDTLYSSS---NDRSIKVWNIE---DR------AYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       220 -~~~~~-~~~~~--~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~---~~------~~~~~~~~~~~~v~~~~~~~  283 (454)
                       .+... ..+..  -...|..+.++|||..++...   .++.|.+--+.   .+      ............++.+.|.+
T Consensus        96 ~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~  175 (253)
T PF10647_consen   96 ASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD  175 (253)
T ss_pred             CCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence             22221 11211  122899999999999888765   35677776543   22      11112223356789999999


Q ss_pred             CCCEEEEeeCCCc
Q psy17902        284 KNRVISSGGTDKS  296 (454)
Q Consensus       284 ~~~~l~~~~~dg~  296 (454)
                      ++.+++.+...+.
T Consensus       176 ~~~L~V~~~~~~~  188 (253)
T PF10647_consen  176 DSTLVVLGRSAGG  188 (253)
T ss_pred             CCEEEEEeCCCCC
Confidence            9988776655443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=97.00  E-value=0.19  Score=46.16  Aligned_cols=196  Identities=10%  Similarity=0.057  Sum_probs=88.6

Q ss_pred             CCCEEEEEe-CCCcEEEEeCCC----ceeEEEeec---cC----CceeEEEeecCCCEEEEee------CCCcEEEeecc
Q psy17902        242 ECDTLYSSS-NDRSIKVWNIED----RAYVETLFG---HQ----SAITSLDILAKNRVISSGG------TDKSVRVWKIQ  303 (454)
Q Consensus       242 ~~~~l~~~~-~dg~i~iwd~~~----~~~~~~~~~---~~----~~v~~~~~~~~~~~l~~~~------~dg~i~i~d~~  303 (454)
                      ..++|+..+ ..+.|+|.|+.+    .+....+..   +.    .....+...|+|.+++++-      .-|.+.++|-.
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            345677666 678999999873    333344331   11    1223344457888877742      22457777777


Q ss_pred             CCeEE-EEccccCC---eEEEEe-cCCCEEEEEe--------------------CCCCEEEEecCCCccceeeecccCCC
Q psy17902        304 EESQL-VFNGHSRG---IDMTRR-VNDQQFITCG--------------------EDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       304 ~~~~~-~~~~~~~~---i~~~~~-~~~~~l~~~~--------------------~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      +.... ........   -.-.++ +..+.+++..                    ...++.+||+.+.+.++++...... 
T Consensus       166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g-  244 (461)
T PF05694_consen  166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG-  244 (461)
T ss_dssp             T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE-
T ss_pred             cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC-
Confidence            65554 22211111   111222 2334444332                    3568999999999999999875421 


Q ss_pred             CCCCCCCcEEEEEEecC--CCE-EEEecCCCcEEEEEc-CCC----ceeeEeccC-------CC--------ceeeeEEE
Q psy17902        359 SSSSEPNWITSVACLHN--SDL-VASGSYDGCVKLWKI-TPK----RTLEFLQDI-------PL--------SGVINSLV  415 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~--~~~-l~~~~~dg~v~iwd~-~~~----~~~~~~~~~-------~~--------~~~v~~l~  415 (454)
                            .....+.|..+  ..+ ++.+...++|..|-- ..+    +.+..+...       +.        ..-|+++.
T Consensus       245 ------~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~  318 (461)
T PF05694_consen  245 ------QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDIL  318 (461)
T ss_dssp             ------EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EE
T ss_pred             ------CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEE
Confidence                  11455666543  433 233333445555543 333    112122111       01        34589999


Q ss_pred             EcCCCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        416 FTSDHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       416 ~s~d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                      .|.|.++|.+++=..|.|+.+|+....+-
T Consensus       319 iSlDDrfLYvs~W~~GdvrqYDISDP~~P  347 (461)
T PF05694_consen  319 ISLDDRFLYVSNWLHGDVRQYDISDPFNP  347 (461)
T ss_dssp             E-TTS-EEEEEETTTTEEEEEE-SSTTS-
T ss_pred             EccCCCEEEEEcccCCcEEEEecCCCCCC
Confidence            99999999999778999999998765543

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=97.00  E-value=0.15  Score=43.93  Aligned_cols=171  Identities=13%  Similarity=0.133  Sum_probs=99.5

Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE---EccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCC
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV---FNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKK  345 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~  345 (454)
                      .+-...+.++.|+|+.+.|++......-.|+=...+..+.   +.+.. ....+.+..++.++.+. .++.+.++.+...
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~-DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~  160 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFS-DPETIEYIGGNQFVIVDERDRALYLFTVDAD  160 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccC-ChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence            4555569999999999988887777666666555566552   22222 22234444555555444 6788888877555


Q ss_pred             ccceeeec-ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc-eeeE--eccCC-----CceeeeEEEE
Q psy17902        346 VPTHTIPV-AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR-TLEF--LQDIP-----LSGVINSLVF  416 (454)
Q Consensus       346 ~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-~~~~--~~~~~-----~~~~v~~l~~  416 (454)
                      ..+..... ..........+...-.++|+|....|+.+-.-.-+.||.+.... .+..  ...+.     .-..|.++.|
T Consensus       161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~  240 (316)
T COG3204         161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEF  240 (316)
T ss_pred             ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccccee
Confidence            33222211 00111111124557889999999988888877778888776432 1111  11100     1234778899


Q ss_pred             cCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      .+....|++-+..++.+.-.+....
T Consensus       241 ~~~~~~LLVLS~ESr~l~Evd~~G~  265 (316)
T COG3204         241 NAITNSLLVLSDESRRLLEVDLSGE  265 (316)
T ss_pred             cCCCCcEEEEecCCceEEEEecCCC
Confidence            8776666666466666665555443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.88  E-value=0.0034  Score=37.89  Aligned_cols=31  Identities=26%  Similarity=0.525  Sum_probs=28.1

Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      ...|.+++|+|..++||.|+.+|.|.+|.++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            3449999999999999999999999999983

>PRK10115 protease 2; Provisional

Probab=96.85  E-value=0.65  Score=46.96  Aligned_cols=238  Identities=9%  Similarity=0.049  Sum_probs=115.6

Q ss_pred             ceEEEEEeCCCcEEEEecCC-----CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEe
Q psy17902        192 PILALAVANNNELVASGDNN-----SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSND------RSIKVWN  259 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd  259 (454)
                      .+..+.++|++++|+.+...     ..|++.|+ ++..+.......  -..++|.++++.|+....+      ..|+.++
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~  205 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWRHT  205 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence            57778899999988876442     36788888 443222211111  1469999998877665442      3688888


Q ss_pred             CCCc--eeEEEeeccCCcee-EEEeecCCCEEEEeeC---CCcEEEeecc--CCeEEEEccccCCeEEEEecCCCEEEEE
Q psy17902        260 IEDR--AYVETLFGHQSAIT-SLDILAKNRVISSGGT---DKSVRVWKIQ--EESQLVFNGHSRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       260 ~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~l~~~  331 (454)
                      +.++  +-...+........ .+..+.++.+++..+.   ++.+.+++..  .+.......+...........++.|...
T Consensus       206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~  285 (686)
T PRK10115        206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLR  285 (686)
T ss_pred             CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEE
Confidence            8887  33333433223233 3333447776654443   3578888843  3332222222222222222333444433


Q ss_pred             eCC--CCEEE--EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-CceeeEeccCC
Q psy17902        332 GED--GTLSL--WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQDIP  406 (454)
Q Consensus       332 ~~d--g~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~  406 (454)
                      +..  ...+|  .++........+....       ....|..+.++ .+.++++...+|.-+++-+.. +..+..+.. .
T Consensus       286 tn~~~~~~~l~~~~~~~~~~~~~l~~~~-------~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~-~  356 (686)
T PRK10115        286 SNRHGKNFGLYRTRVRDEQQWEELIPPR-------ENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTREVIGIAF-D  356 (686)
T ss_pred             EcCCCCCceEEEecCCCcccCeEEECCC-------CCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCCceEEecC-C
Confidence            322  23333  3433211111111110       11237778887 334666666677766555442 223333331 1


Q ss_pred             CceeeeEEEEc--CCCC-EEEEEecC--CCceeeeeeeC
Q psy17902        407 LSGVINSLVFT--SDHK-HLVAGIGT--EHRFGRWKTIK  440 (454)
Q Consensus       407 ~~~~v~~l~~s--~d~~-~l~~~~~~--d~~i~~W~~~~  440 (454)
                      ....+..+.++  +++. ++++.++.  -+.+..++..+
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~  395 (686)
T PRK10115        357 DPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDT  395 (686)
T ss_pred             CCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCC
Confidence            12223334444  4444 44433332  44555555444

>PHA03098 kelch-like protein; Provisional

Probab=96.84  E-value=0.096  Score=51.49  Aligned_cols=185  Identities=6%  Similarity=0.037  Sum_probs=88.7

Q ss_pred             CCCEEEEEeCCC------eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEeCCC
Q psy17902        153 DSKHVYSACKDG------IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWSSSL  221 (454)
Q Consensus       153 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~~~  221 (454)
                      ++.+++.|+.++      .+..||..+..-........    ...... ++ .-++.+++.|+.+     ..+..||...
T Consensus       294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~R~~~~-~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~  367 (534)
T PHA03098        294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIY----PRKNPG-VT-VFNNRIYVIGGIYNSISLNTVESWKPGE  367 (534)
T ss_pred             CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCc----ccccce-EE-EECCEEEEEeCCCCCEecceEEEEcCCC
Confidence            445666776542      56778877655432221110    111111 22 2367777788765     3467777733


Q ss_pred             ccEEeecc--cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCceeEEEeecc-CCceeEEEeecCCCEEEEee
Q psy17902        222 EHLHTFTG--HKAPITGLAISFECDTLYSSSND------RSIKVWNIEDRAYVETLFGH-QSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       222 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~  292 (454)
                      ..-.....  +...-.+++. -++..++.||.+      ..+..||+.+.+....-... ...-.++.. .++.+++.|+
T Consensus       368 ~~W~~~~~lp~~r~~~~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG  445 (534)
T PHA03098        368 SKWREEPPLIFPRYNPCVVN-VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY-HDGKIYVIGG  445 (534)
T ss_pred             CceeeCCCcCcCCccceEEE-ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE-ECCEEEEECC
Confidence            22222111  1111112222 256667777632      45888998876533211100 001112222 3566666676


Q ss_pred             CCC--------cEEEeeccCCeEEEEccc--cCCeEEEEecCCCEEEEEeCC-----CCEEEEecCCC
Q psy17902        293 TDK--------SVRVWKIQEESQLVFNGH--SRGIDMTRRVNDQQFITCGED-----GTLSLWSILKK  345 (454)
Q Consensus       293 ~dg--------~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~  345 (454)
                      .++        .+.+||..+.+-......  ......+...++..++.|+.+     ..|.+||..+.
T Consensus       446 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~  513 (534)
T PHA03098        446 ISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKTN  513 (534)
T ss_pred             ccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCCC
Confidence            432        388899887665533211  111122233356666666643     46777776654

>KOG2280|consensus

Probab=96.83  E-value=0.048  Score=52.77  Aligned_cols=195  Identities=11%  Similarity=0.123  Sum_probs=102.6

Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe----eccCCceeEEEeecCCC
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL----FGHQSAITSLDILAKNR  286 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~  286 (454)
                      --.|+||++.|..+..+....+.+-.+.|+.+. .|++...+|++++|++-. ..+...    ......|..+.+..+|-
T Consensus        63 ~~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~~GV  140 (829)
T KOG2280|consen   63 RPYIRIFNISGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFHNGV  140 (829)
T ss_pred             ceeEEEEeccccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch-hhhcccccccccccCceeEEEEecCce
Confidence            356999999999888877666688899999654 677778999999999863 222221    12233344444444553


Q ss_pred             EEEEeeCCCcEE-EeeccCCeEEEEcc---ccCCeEEE-EecCC--CE-EEEEe-CCCCEEEEecCCC-ccceeeecccC
Q psy17902        287 VISSGGTDKSVR-VWKIQEESQLVFNG---HSRGIDMT-RRVND--QQ-FITCG-EDGTLSLWSILKK-VPTHTIPVAHG  356 (454)
Q Consensus       287 ~l~~~~~dg~i~-i~d~~~~~~~~~~~---~~~~i~~~-~~~~~--~~-l~~~~-~dg~i~iwd~~~~-~~~~~~~~~~~  356 (454)
                      .+++  .+|.+. +.+........+..   ....-+|- .+.++  .. ++-.. ..+ ..++-.... ...+.+..   
T Consensus       141 avlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~---  214 (829)
T KOG2280|consen  141 AVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSW---  214 (829)
T ss_pred             EEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCC---
Confidence            3333  334443 33333222222211   11111111 11121  11 11100 000 001111000 01111111   


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                            ....+..+..||++++|+--...|.|.+-+....+.+..+....+ .+.-.++|.-+.
T Consensus       215 ------~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~-~~p~qm~Wcgnd  271 (829)
T KOG2280|consen  215 ------PNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDH-DPPKQMAWCGND  271 (829)
T ss_pred             ------CCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCC-CchHhceeecCC
Confidence                  123388899999999999999999999999887777666654222 223356665443

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=96.77  E-value=0.094  Score=49.52  Aligned_cols=147  Identities=10%  Similarity=0.063  Sum_probs=84.5

Q ss_pred             CeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----CcEEEEecCCCcEEEE
Q psy17902        144 SITCIAVTSDSKHVYSAC--KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NELVASGDNNSNIKLW  217 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg~v~vw  217 (454)
                      +|..++|....+.++|.-  .+|.+++=|   ...+          +....|..++|.|-    ...|++......|.||
T Consensus        21 PvhGlaWTDGkqVvLT~L~l~~gE~kfGd---s~vi----------GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVW   87 (671)
T PF15390_consen   21 PVHGLAWTDGKQVVLTDLQLHNGEPKFGD---SKVI----------GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVW   87 (671)
T ss_pred             cccceEecCCCEEEEEeeeeeCCccccCC---ccEe----------eccceeeeeeecCcccCCCCceEEEeccceEEEE
Confidence            588899974334444432  233333221   1112          34456999999984    2234444556889999


Q ss_pred             eCC------CccEEeeccc-----CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc--eeEEEeeccCCceeEEEeecC
Q psy17902        218 SSS------LEHLHTFTGH-----KAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--AYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       218 ~~~------~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      .+.      .+.+.....+     .---..+.|+|....|++-.....-.++++...  .....+ ...+.|.|.+|.+|
T Consensus        88 qL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~D  166 (671)
T PF15390_consen   88 QLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKD  166 (671)
T ss_pred             EeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCc
Confidence            972      1222111111     111246789999888777665554445665432  222333 46788999999999


Q ss_pred             CCEEEEe-eCCCcEEEeeccC
Q psy17902        285 NRVISSG-GTDKSVRVWKIQE  304 (454)
Q Consensus       285 ~~~l~~~-~~dg~i~i~d~~~  304 (454)
                      |+.|+++ +..=.-+|||-..
T Consensus       167 G~RLVVAvGSsLHSyiWd~~q  187 (671)
T PF15390_consen  167 GQRLVVAVGSSLHSYIWDSAQ  187 (671)
T ss_pred             CCEEEEEeCCeEEEEEecCch
Confidence            9876654 3334568898654

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=96.62  E-value=0.53  Score=42.86  Aligned_cols=219  Identities=10%  Similarity=0.073  Sum_probs=102.4

Q ss_pred             EEeCCCcEEEEec-CCC--cEEEEeCCCccEEeecccCC-CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc
Q psy17902        197 AVANNNELVASGD-NNS--NIKLWSSSLEHLHTFTGHKA-PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH  272 (454)
Q Consensus       197 ~~~~~~~~l~~~~-~dg--~v~vw~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  272 (454)
                      +|.++|+.|+.++ .+|  .+.+.|+....+..+....+ ......++++++.++-......|.-.|+.+.+....+...
T Consensus        42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p  121 (386)
T PF14583_consen   42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP  121 (386)
T ss_dssp             -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred             CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence            5678886555544 455  56666777777766665432 2335677888888877666678999999998765555555


Q ss_pred             CCceeEEEee--cCCCEEEEeeC----------------------CCcEEEeeccCCeEEEEccccCCeEEEE-ecCCCE
Q psy17902        273 QSAITSLDIL--AKNRVISSGGT----------------------DKSVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQ  327 (454)
Q Consensus       273 ~~~v~~~~~~--~~~~~l~~~~~----------------------dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~  327 (454)
                      ...+-...|.  .++..++-.-.                      ...|...|+.+++.........-+..+. +|.+..
T Consensus       122 ~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~  201 (386)
T PF14583_consen  122 DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPT  201 (386)
T ss_dssp             TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEEE
T ss_pred             cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCCC
Confidence            5555555664  34454432211                      1234555666666554433344443333 344444


Q ss_pred             EEEEeCCC-----CEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE-----ecCCCcEEEEEcCCC
Q psy17902        328 FITCGEDG-----TLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS-----GSYDGCVKLWKITPK  396 (454)
Q Consensus       328 l~~~~~dg-----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-----~~~dg~v~iwd~~~~  396 (454)
                      +++-|..|     .-|||-+++. .....+....       ....+.-=-|.|+|..|.-     ++.+..|.-+++.++
T Consensus       202 li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~-------~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~  274 (386)
T PF14583_consen  202 LIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM-------EGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTG  274 (386)
T ss_dssp             EEEEEE-S-TTTSS-SEEEEETTS---EESS----------TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT-
T ss_pred             EEEEeccCCcceeceEEEEEEcCCCcceeeecCC-------CCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCC
Confidence            44443222     1355655432 2222221111       1223666678999985443     223446777788877


Q ss_pred             ceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       397 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      .......    ......+.-++||++++-=
T Consensus       275 ~~~~~~~----~p~~~H~~ss~Dg~L~vGD  300 (386)
T PF14583_consen  275 ERRRLME----MPWCSHFMSSPDGKLFVGD  300 (386)
T ss_dssp             -EEEEEE----E-SEEEEEE-TTSSEEEEE
T ss_pred             CceEEEe----CCceeeeEEcCCCCEEEec
Confidence            5433222    1134456678999877654

>KOG1916|consensus

Probab=96.57  E-value=0.00072  Score=65.81  Aligned_cols=169  Identities=10%  Similarity=0.071  Sum_probs=98.7

Q ss_pred             eccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCC--CceecccCCcccC--CCCCCceEEEEEeCCCcEEEEecC
Q psy17902        136 FNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLET--RSKVCSSPFVKTD--RKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       136 ~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ++|  ..+.|..++|-.. -..++  -.-|.+.||+++-  ++....+......  .....-|..+-|.++.-++..+..
T Consensus       128 ~kg--f~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~  203 (1283)
T KOG1916|consen  128 AKG--FPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLK  203 (1283)
T ss_pred             Hhc--CCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccC
Confidence            455  7778888888431 11222  2236788998763  3322222211111  111123444445557778888888


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEE-----------EEcCCCCEEEEEeCCCcEEEEeCC-----CceeEEEeeccC-
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGL-----------AISFECDTLYSSSNDRSIKVWNIE-----DRAYVETLFGHQ-  273 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~dg~i~iwd~~-----~~~~~~~~~~~~-  273 (454)
                      ++.|++..++......+.+|...+..+           ..+|||+.|++++.||.++.|.+.     ...++...+.|. 
T Consensus       204 ~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~  283 (1283)
T KOG1916|consen  204 GGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDK  283 (1283)
T ss_pred             CCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCC
Confidence            999999888555445566676655544           357999999999999998888753     334555566666 


Q ss_pred             CceeEEEeecCC---------CEEEEee-CCCcEEEeeccCCeEE
Q psy17902        274 SAITSLDILAKN---------RVISSGG-TDKSVRVWKIQEESQL  308 (454)
Q Consensus       274 ~~v~~~~~~~~~---------~~l~~~~-~dg~i~i~d~~~~~~~  308 (454)
                      .+-.|..++.+.         .++++++ .+..+++|.....+++
T Consensus       284 ~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  284 HPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             CCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            333333343221         1333333 3556888887666555

>PHA02790 Kelch-like protein; Provisional

Probab=96.53  E-value=0.31  Score=47.00  Aligned_cols=180  Identities=9%  Similarity=0.028  Sum_probs=87.3

Q ss_pred             CCCEEEEEeCCC-----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC--CcEEEEeCCCccEE
Q psy17902        153 DSKHVYSACKDG-----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN--SNIKLWSSSLEHLH  225 (454)
Q Consensus       153 ~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~v~vw~~~~~~~~  225 (454)
                      ++.++++|+.++     .+..||..+..-....+... .  . ... +++ .-++.+.+.|+.+  ..+..|+.....-.
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~-~--r-~~~-~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~  344 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNS-P--R-LYA-SGV-PANNKLYVVGGLPNPTSVERWFHGDAAWV  344 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCc-h--h-hcc-eEE-EECCEEEEECCcCCCCceEEEECCCCeEE
Confidence            345667777543     56678877654332222111 0  1 011 122 2367777777754  35777886332222


Q ss_pred             eecccCCCe--EEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEEE--eeccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        226 TFTGHKAPI--TGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVET--LFGHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       226 ~~~~~~~~v--~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                      ....-..+.  .+++ .-++...+.||.++   .+..||..+.+....  +...... .+++ .-++.+.+.|   |.+.
T Consensus       345 ~~~~l~~~r~~~~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~-~~~~-~~~~~IYv~G---G~~e  418 (480)
T PHA02790        345 NMPSLLKPRCNPAVA-SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK-SCAL-VFGRRLFLVG---RNAE  418 (480)
T ss_pred             ECCCCCCCCcccEEE-EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc-ceEE-EECCEEEEEC---CceE
Confidence            221111111  1222 23577777777653   477888876653321  1111111 1222 2355666665   3578


Q ss_pred             EeeccCCeEEEEcc--ccCCeEEEEecCCCEEEEEeCC-----CCEEEEecCC
Q psy17902        299 VWKIQEESQLVFNG--HSRGIDMTRRVNDQQFITCGED-----GTLSLWSILK  344 (454)
Q Consensus       299 i~d~~~~~~~~~~~--~~~~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~  344 (454)
                      +||..+++-.....  ....-..+...++..+++|+.+     ..+.+||..+
T Consensus       419 ~ydp~~~~W~~~~~m~~~r~~~~~~v~~~~IYviGG~~~~~~~~~ve~Yd~~~  471 (480)
T PHA02790        419 FYCESSNTWTLIDDPIYPRDNPELIIVDNKLLLIGGFYRGSYIDTIEVYNNRT  471 (480)
T ss_pred             EecCCCCcEeEcCCCCCCccccEEEEECCEEEEECCcCCCcccceEEEEECCC
Confidence            89988766553222  1122223444567777777754     2355555543

>KOG2377|consensus

Probab=96.52  E-value=0.39  Score=43.97  Aligned_cols=151  Identities=9%  Similarity=0.114  Sum_probs=93.8

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc-----EEee
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH-----LHTF  227 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~-----~~~~  227 (454)
                      |.+.++.+...|.+.=|-+.....--.+.+.   ....++|.++.|++|++.||+--.+..|.+++..+..     ..+.
T Consensus        32 DaNkqlfavrSggatgvvvkgpndDVpiSfd---m~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~c  108 (657)
T KOG2377|consen   32 DANKQLFAVRSGGATGVVVKGPNDDVPISFD---MDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQEC  108 (657)
T ss_pred             cCcceEEEEecCCeeEEEEeCCCCCCCceee---ecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHh
Confidence            4444444445566666766544321111111   1345599999999999999999999999999982222     1222


Q ss_pred             cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEee--CCCcEEEeeccC
Q psy17902        228 TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGG--TDKSVRVWKIQE  304 (454)
Q Consensus       228 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~  304 (454)
                      +..+..|...+|+.+ .-++..+..| +-+|.+... ..++..+.|.-.|+-..|.++.+.++-++  ..+++.=+-+++
T Consensus       109 k~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~  186 (657)
T KOG2377|consen  109 KTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRA  186 (657)
T ss_pred             ccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEee
Confidence            334556889999865 5566666555 666665433 34555567888898899998887544333  344444455555


Q ss_pred             CeEE
Q psy17902        305 ESQL  308 (454)
Q Consensus       305 ~~~~  308 (454)
                      +...
T Consensus       187 ~~v~  190 (657)
T KOG2377|consen  187 GTMS  190 (657)
T ss_pred             ceee
Confidence            4433

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=96.51  E-value=0.3  Score=45.35  Aligned_cols=143  Identities=14%  Similarity=0.076  Sum_probs=78.1

Q ss_pred             CCCeEEEEEcCCCCEEEEEe-----------CCC-eEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902        142 RASITCIAVTSDSKHVYSAC-----------KDG-IIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVAS  207 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~-----------~dg-~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  207 (454)
                      -.....|+|.++|+++++-.           ..+ .|.+++-.++.  ......+.    ........|++.+++ +++ 
T Consensus        13 ~~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa----~~l~~p~Gi~~~~~G-lyV-   86 (367)
T TIGR02604        13 LRNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFA----EELSMVTGLAVAVGG-VYV-   86 (367)
T ss_pred             cCCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEee----cCCCCccceeEecCC-EEE-
Confidence            34578899999999877653           223 67777544322  11111110    122346788999888 444 


Q ss_pred             ecCCCcEEEEeCCC------cc--EE-eecc----cCCCeEEEEEcCCCCEEEEEeCC-------------------CcE
Q psy17902        208 GDNNSNIKLWSSSL------EH--LH-TFTG----HKAPITGLAISFECDTLYSSSND-------------------RSI  255 (454)
Q Consensus       208 ~~~dg~v~vw~~~~------~~--~~-~~~~----~~~~v~~~~~~~~~~~l~~~~~d-------------------g~i  255 (454)
                      ++.....++.+..+      ..  +. .+..    +......++|.|+|.+.++-+..                   |.|
T Consensus        87 ~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i  166 (367)
T TIGR02604        87 ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL  166 (367)
T ss_pred             eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence            44443333445422      11  11 1221    23457789999999877655521                   445


Q ss_pred             EEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       256 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      .-++..++.....-.++ .....++|+++|+++++-
T Consensus       167 ~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~td  201 (367)
T TIGR02604       167 FRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCD  201 (367)
T ss_pred             EEEecCCCeEEEEecCc-CCCccceECCCCCEEEEc
Confidence            56666554432222232 334678898888877653

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PHA02790 Kelch-like protein; Provisional

Probab=96.50  E-value=0.3  Score=47.13  Aligned_cols=180  Identities=8%  Similarity=0.019  Sum_probs=86.0

Q ss_pred             CCcEEEEecCCC-----cEEEEeCCCccEEee---cccCCCeEEEEEcCCCCEEEEEeCC--CcEEEEeCCCceeEEEee
Q psy17902        201 NNELVASGDNNS-----NIKLWSSSLEHLHTF---TGHKAPITGLAISFECDTLYSSSND--RSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       201 ~~~~l~~~~~dg-----~v~vw~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~  270 (454)
                      ++.++++|+.++     .+..||.....-..+   ....... +++ .-++...+.|+.+  ..+..||..+.+... +.
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~-~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~-~~  347 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYA-SGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVN-MP  347 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcc-eEE-EECCEEEEECCcCCCCceEEEECCCCeEEE-CC
Confidence            455667776542     466777733222221   1111112 222 2356777777754  357888876554322 11


Q ss_pred             ccCCce--eEEEeecCCCEEEEeeCCC---cEEEeeccCCeEEEEccc--cCCeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902        271 GHQSAI--TSLDILAKNRVISSGGTDK---SVRVWKIQEESQLVFNGH--SRGIDMTRRVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       271 ~~~~~v--~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                      .-..+.  .+++ .-++.+.+.|+.++   .+..||..+..-.....-  ...-.++...++..++.|   |.+.+||..
T Consensus       348 ~l~~~r~~~~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G---G~~e~ydp~  423 (480)
T PHA02790        348 SLLKPRCNPAVA-SINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG---RNAEFYCES  423 (480)
T ss_pred             CCCCCCcccEEE-EECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC---CceEEecCC
Confidence            111111  1222 23577777777653   467888877655422111  111123334455555555   357788876


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK  396 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~  396 (454)
                      +.+=...-+....       .. -.+++ .-++++.++|+.+     .+|..||..++
T Consensus       424 ~~~W~~~~~m~~~-------r~-~~~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~  472 (480)
T PHA02790        424 SNTWTLIDDPIYP-------RD-NPELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTY  472 (480)
T ss_pred             CCcEeEcCCCCCC-------cc-ccEEE-EECCEEEEECCcCCCcccceEEEEECCCC
Confidence            5432211111110       00 11222 2366777777754     24666666544

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=96.47  E-value=0.5  Score=40.77  Aligned_cols=270  Identities=10%  Similarity=0.039  Sum_probs=148.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC--
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL--  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~--  221 (454)
                      -+..+.++.  ++.+.+..+.-++|.|+.+........+..    ..+-..+  |.-.|++..++..+.-+.+.|+..  
T Consensus        88 l~~Dv~vse--~yvyvad~ssGL~IvDIS~P~sP~~~~~ln----t~gyayg--v~vsGn~aYVadlddgfLivdvsdps  159 (370)
T COG5276          88 LFADVRVSE--EYVYVADWSSGLRIVDISTPDSPTLIGFLN----TDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPS  159 (370)
T ss_pred             hhheeEecc--cEEEEEcCCCceEEEeccCCCCcceecccc----CCceEEE--EEecCCEEEEeeccCcEEEEECCCCC
Confidence            344555554  677778888889999999876554443211    1122333  444678888888677778888822  


Q ss_pred             ccE--EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        222 EHL--HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       222 ~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      .+.  ..+.........++.+  |++-+.+..|+-+.+-|+.....   +... .....+.++..+++.-+++.  .+--
T Consensus       160 sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~-n~g~g~~sv~vsdnr~y~vv--y~eg  234 (370)
T COG5276         160 SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSY-NTGPGTYSVSVSDNRAYLVV--YDEG  234 (370)
T ss_pred             CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEE-ecCCceEEEEecCCeeEEEE--cccc
Confidence            222  2333334444556665  77888888999999999876533   2222 23346788887766555554  3445


Q ss_pred             EEEeeccCCeEEEEccc---cCCeEE-EEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        297 VRVWKIQEESQLVFNGH---SRGIDM-TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       297 i~i~d~~~~~~~~~~~~---~~~i~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      +.+-|....+.....+.   ..+... .....+++......+.-+.+.|+.+......... ...     ....-..+..
T Consensus       235 vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss-~~t-----~g~~a~gi~a  308 (370)
T COG5276         235 VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSS-LDT-----AGYQAAGIRA  308 (370)
T ss_pred             eEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCCCchhcc-ccC-----CCccccceEE
Confidence            77778877664422222   111111 2334566666666666677777654322111100 000     0000122222


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                        .+.++..+..+ +..+-+....+.......  ....+.+.+.+-+.+.+.++ ..++.+.+|+.
T Consensus       309 --y~~y~yiadkn-~g~vV~~s~~s~m~~~~g--~~ti~~s~~v~~~~q~~y~~-d~~~gl~i~~~  368 (370)
T COG5276         309 --YGNYNYIADKN-TGAVVDASPPSMMDKRPG--RPTIGQSCDVSVDTQIIYST-DYNGGLSIIEY  368 (370)
T ss_pred             --ecCeeEeccCC-ceEEEeCCChhhcccccC--cceEeeecceEEEeeEEEEe-ecCCCEEEEEe
Confidence              24455555544 455555544433333332  22334455555566666665 78888888875

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=96.45  E-value=1  Score=44.16  Aligned_cols=246  Identities=14%  Similarity=0.150  Sum_probs=132.4

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceecccCCcccCCCCCCceEEEEEeCC---CcEEEEecCC-CcEEEEeC-
Q psy17902        146 TCIAVTSDSKHVYSACKDGIIIKWLLE-TRSKVCSSPFVKTDRKSYPPILALAVANN---NELVASGDNN-SNIKLWSS-  219 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d-g~v~vw~~-  219 (454)
                      .+..++|+.+.+-.|=....|.-|=+. +.+.+..++.     .....|.||.....   .++.++|-.+ +.-++..+ 
T Consensus        31 vs~~~s~~sn~IdiGIS~S~ISsYIi~PTPKLiwsypi-----~pt~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~  105 (670)
T PF10395_consen   31 VSDDFSPDSNQIDIGISGSAISSYIIKPTPKLIWSYPI-----SPTTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIE  105 (670)
T ss_pred             eecccCCCCceEEEEeccchhhheecCCCcceeEeecc-----CcCceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEE
Confidence            344677888888777666666555443 4555666655     45557888876543   2345555333 33344333 


Q ss_pred             -C----------Cc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee--EEEee-ccCC------cee
Q psy17902        220 -S----------LE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--VETLF-GHQS------AIT  277 (454)
Q Consensus       220 -~----------~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~-~~~~------~v~  277 (454)
                       .          ..  ....++ -...|..+.|.+++..+++...+|.|.+||...+..  +..+. .+..      -|.
T Consensus       106 ~~~~~~~~~~~~~e~~~~~~~k-l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~  184 (670)
T PF10395_consen  106 RKVGSTEDGTVNSETTNEFELK-LDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVN  184 (670)
T ss_pred             ccCccccccccCccccceEEEE-cccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhc
Confidence             1          11  122222 367888999999999999999999999999932221  11111 1222      122


Q ss_pred             EEEeecCCCEEEEeeC-C---CcEEEeec--cCCeEEEEc----cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902        278 SLDILAKNRVISSGGT-D---KSVRVWKI--QEESQLVFN----GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP  347 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~-d---g~i~i~d~--~~~~~~~~~----~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  347 (454)
                      ....-....++++.+. +   -..+++.+  .........    .......+.+....+.|..- .++.|.+|++...+.
T Consensus       185 ~~~~~~~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l-~~~~i~~ysip~f~~  263 (670)
T PF10395_consen  185 DFELENGKDLLLTVSQLSNSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGKLYQL-SKKTISSYSIPNFQI  263 (670)
T ss_pred             ccccccCCceEEEEEEcCCCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCEEEEE-eCCEEEEEEcCCceE
Confidence            2221112345544444 3   24677777  333333221    11112222222233333333 778999999998888


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      .+++..........   ..+.++.--...+.|++.  +++|++.|+.-...+..+.
T Consensus       264 ~~tI~l~~ii~~~~---~~~vSl~~~s~nRvLLs~--~nkIyLld~~~~siLse~~  314 (670)
T PF10395_consen  264 QKTISLPSIIDKES---DDLVSLKPPSPNRVLLSV--NNKIYLLDLKFESILSEFE  314 (670)
T ss_pred             EEEEEechhhcccc---ccceEeecCCCCeEEEEc--CCEEEEEeehhhhhhhhhh
Confidence            88887664332111   113333322233344433  4579999987665555444

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.37  E-value=1.3  Score=44.59  Aligned_cols=74  Identities=9%  Similarity=0.104  Sum_probs=52.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC----------cee---EEEe--------eccCCceeEEEeecC---CCE
Q psy17902        232 APITGLAISFECDTLYSSSNDRSIKVWNIED----------RAY---VETL--------FGHQSAITSLDILAK---NRV  287 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----------~~~---~~~~--------~~~~~~v~~~~~~~~---~~~  287 (454)
                      -.|..|.++|+|++|+..|..| |.|..+..          ++.   .+++        ..+...|..+.|+|.   +..
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            3678899999999999998866 44444421          111   1111        134567899999987   478


Q ss_pred             EEEeeCCCcEEEeeccCCe
Q psy17902        288 ISSGGTDKSVRVWKIQEES  306 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~  306 (454)
                      |++-..|+++|+||+....
T Consensus       164 l~vLtsdn~lR~y~~~~~~  182 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDPQ  182 (717)
T ss_pred             EEEEecCCEEEEEecCCCC
Confidence            8888999999999997543

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG3630|consensus

Probab=96.30  E-value=0.03  Score=56.58  Aligned_cols=145  Identities=10%  Similarity=0.008  Sum_probs=90.9

Q ss_pred             CeEEEEEcCCCCEEEEEeC--CCeEEEEEcCCCceecccC---Cc--ccCCCCCCceEEEEEeCCCc-EEEEecCCCcEE
Q psy17902        144 SITCIAVTSDSKHVYSACK--DGIIIKWLLETRSKVCSSP---FV--KTDRKSYPPILALAVANNNE-LVASGDNNSNIK  215 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~---~~--~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~  215 (454)
                      +|..+...+|+...++...  +-.|..||+.+........   +.  ........-..++.|+|.-. ..+++..|+.|+
T Consensus       102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~  181 (1405)
T KOG3630|consen  102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR  181 (1405)
T ss_pred             cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence            4666666777666554433  3378889987644332111   10  11112233456788888532 355667788898


Q ss_pred             EEeCC--CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec----cCCceeEEEeecCCCEEE
Q psy17902        216 LWSSS--LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG----HQSAITSLDILAKNRVIS  289 (454)
Q Consensus       216 vw~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~  289 (454)
                      +..+.  ...+.. .......++++|+|.|+.+++|-..|++.-|-..- +....+.+    ....|.+|+|.....+++
T Consensus       182 V~~~~~~~~~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~t~eflv  259 (1405)
T KOG3630|consen  182 VKSTKQLAQNVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLSTQEFLV  259 (1405)
T ss_pred             hhhhhhhhhhhcc-cCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEecceeEEE
Confidence            88872  222233 23567889999999999999999999999887542 32222221    246799999987666665


Q ss_pred             E
Q psy17902        290 S  290 (454)
Q Consensus       290 ~  290 (454)
                      +
T Consensus       260 v  260 (1405)
T KOG3630|consen  260 V  260 (1405)
T ss_pred             E
Confidence            4

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=96.28  E-value=0.97  Score=42.09  Aligned_cols=149  Identities=13%  Similarity=0.099  Sum_probs=80.3

Q ss_pred             eeEEEeecCCCEEEEeeCCCcEEEeeccCCe-EEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc-----cce
Q psy17902        276 ITSLDILAKNRVISSGGTDKSVRVWKIQEES-QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV-----PTH  349 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~  349 (454)
                      ...+..++++.+++.+..-..++-||--... ..........+..+.+.++..++..+..|.+.. ....+.     ...
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f~  319 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDFE  319 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCCceEEE-ecCCCCccccccee
Confidence            3445556777776655433323334332211 112222233455555555555666666776543 333332     122


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEec
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ......       ....+..+.|.+++..+++| ..|.+... ...|+....... .......+.+.|.++++.++++  
T Consensus       320 ~~~~~~-------~~~~l~~v~~~~d~~~~a~G-~~G~v~~s-~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G--  388 (398)
T PLN00033        320 EADIKS-------RGFGILDVGYRSKKEAWAAG-GSGILLRS-TDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG--  388 (398)
T ss_pred             ecccCC-------CCcceEEEEEcCCCcEEEEE-CCCcEEEe-CCCCcceeEccccCCCCcceeEEEEcCCCceEEEe--
Confidence            221110       11238889999888776665 45655554 456666555442 1234668899998887777665  


Q ss_pred             CCCceeee
Q psy17902        429 TEHRFGRW  436 (454)
Q Consensus       429 ~d~~i~~W  436 (454)
                      .+|.|..|
T Consensus       389 ~~G~il~~  396 (398)
T PLN00033        389 NDGVLLRY  396 (398)
T ss_pred             CCcEEEEe
Confidence            78888766

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=96.21  E-value=1.6  Score=43.99  Aligned_cols=72  Identities=11%  Similarity=0.121  Sum_probs=51.7

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeC--C----C-----cc---EEee--------cccCCCeEEEEEcCC---CCE
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSS--S----L-----EH---LHTF--------TGHKAPITGLAISFE---CDT  245 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~----~-----~~---~~~~--------~~~~~~v~~~~~~~~---~~~  245 (454)
                      -.|..+.++|+|.+|+..+..|.+ |..+  .    +     ..   ..++        ..+...|..+.|+|.   +.+
T Consensus        85 f~v~~i~~n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~  163 (717)
T PF10168_consen   85 FEVHQISLNPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH  163 (717)
T ss_pred             eeEEEEEECCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence            368889999999999998876644 3333  1    1     11   1111        134567889999996   589


Q ss_pred             EEEEeCCCcEEEEeCCCc
Q psy17902        246 LYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       246 l~~~~~dg~i~iwd~~~~  263 (454)
                      |++-+.|+++++||+...
T Consensus       164 l~vLtsdn~lR~y~~~~~  181 (717)
T PF10168_consen  164 LVVLTSDNTLRLYDISDP  181 (717)
T ss_pred             EEEEecCCEEEEEecCCC
Confidence            999999999999999754

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=96.17  E-value=0.34  Score=45.05  Aligned_cols=143  Identities=9%  Similarity=0.045  Sum_probs=79.0

Q ss_pred             EeCCCcEEEE-ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCC-------EEEEEeCCCcEEEEeCCC-ceeEE
Q psy17902        198 VANNNELVAS-GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECD-------TLYSSSNDRSIKVWNIED-RAYVE  267 (454)
Q Consensus       198 ~~~~~~~l~~-~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~iwd~~~-~~~~~  267 (454)
                      ...+..+|+. |..-..++-.|+ .++.+.....|...  -+.|.|..+       .-++|-++..|.-.|.+- +..+.
T Consensus       475 h~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~  552 (776)
T COG5167         475 HDNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIK  552 (776)
T ss_pred             ecCCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCcee
Confidence            3445555444 344456666677 67777777767654  467777532       234444555566666543 22221


Q ss_pred             Ee--e--ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902        268 TL--F--GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       268 ~~--~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~  342 (454)
                      ..  +  .......|..-. ...++++++..|-|++||--..... .+++....|..+....++.++.++....+.+-|+
T Consensus       553 v~esKdY~tKn~Fss~~tT-esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~  631 (776)
T COG5167         553 VVESKDYKTKNKFSSGMTT-ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDV  631 (776)
T ss_pred             eeeehhccccccccccccc-cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEec
Confidence            11  1  112223333322 4568999999999999996443222 4555556666555554443444444566777776


Q ss_pred             C
Q psy17902        343 L  343 (454)
Q Consensus       343 ~  343 (454)
                      +
T Consensus       632 ~  632 (776)
T COG5167         632 P  632 (776)
T ss_pred             c
Confidence            3

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=96.17  E-value=0.28  Score=48.42  Aligned_cols=115  Identities=12%  Similarity=0.096  Sum_probs=69.7

Q ss_pred             CCCEEEEEeCCCCEEEEecCCCc--------ccee-e-ecccCCCCCCCCCCcEEEEEEe--cCCCEEEEecCCCcEEEE
Q psy17902        324 NDQQFITCGEDGTLSLWSILKKV--------PTHT-I-PVAHGYDSSSSEPNWITSVACL--HNSDLVASGSYDGCVKLW  391 (454)
Q Consensus       324 ~~~~l~~~~~dg~i~iwd~~~~~--------~~~~-~-~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~dg~v~iw  391 (454)
                      ....|++|..||.|.+|.+.+-.        .... . ................++++++  ...++||+++....|.||
T Consensus       113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF  192 (717)
T PF08728_consen  113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF  192 (717)
T ss_pred             CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence            45678899999999999762210        0000 0 0000000000122348899998  788899999998889988


Q ss_pred             EcCCC-ceeeEeccCCCceeeeEEEEcCCC-----CEEEEEecCCCceeeeee
Q psy17902        392 KITPK-RTLEFLQDIPLSGVINSLVFTSDH-----KHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       392 d~~~~-~~~~~~~~~~~~~~v~~l~~s~d~-----~~l~~~~~~d~~i~~W~~  438 (454)
                      -+... ..........+...|.+++|-++.     ...+++++-.|.+.+|+.
T Consensus       193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            76542 111111123356678999998764     224444488999988877

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=96.16  E-value=0.78  Score=39.93  Aligned_cols=152  Identities=14%  Similarity=0.069  Sum_probs=82.6

Q ss_pred             ceeEEEeecCCCEEEEee---CCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEE-EEEeCCCCEEEEe-cCCCccc-
Q psy17902        275 AITSLDILAKNRVISSGG---TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQF-ITCGEDGTLSLWS-ILKKVPT-  348 (454)
Q Consensus       275 ~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l-~~~~~dg~i~iwd-~~~~~~~-  348 (454)
                      .+.+.++++++..++...   ....++++...........+.  .+..-.|.....+ +....+...+++. ...+... 
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~--~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~  102 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGG--SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEP  102 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCC--ccccccccCCCCEEEEEcCCCceEEEEecCCCccee
Confidence            688999999998776554   333455554443333332222  3333333333444 4444455556653 2222221 


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec---CCCcEEEEEcCCC--c---ee-eEeccC-CCceeeeEEEEcC
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS---YDGCVKLWKITPK--R---TL-EFLQDI-PLSGVINSLVFTS  418 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~v~iwd~~~~--~---~~-~~~~~~-~~~~~v~~l~~s~  418 (454)
                      ..+.....       ...|+.+.+||||..+|...   .++.|.+=-+...  .   .+ ..+... .....++++.|.+
T Consensus       103 ~~v~~~~~-------~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~  175 (253)
T PF10647_consen  103 VEVDWPGL-------RGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD  175 (253)
T ss_pred             EEeccccc-------CCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence            11111110       01499999999999766654   3577777765422  1   11 111110 1346789999999


Q ss_pred             CCCEEEEEecCCCceee
Q psy17902        419 DHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~  435 (454)
                      ++.+++.+...+..+..
T Consensus       176 ~~~L~V~~~~~~~~~~~  192 (253)
T PF10647_consen  176 DSTLVVLGRSAGGPVVR  192 (253)
T ss_pred             CCEEEEEeCCCCCceeE
Confidence            99988888666665544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PRK10115 protease 2; Provisional

Probab=96.11  E-value=1.9  Score=43.76  Aligned_cols=236  Identities=12%  Similarity=0.002  Sum_probs=116.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC------C
Q psy17902        144 SITCIAVTSDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN------S  212 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g  212 (454)
                      .+..+.++|++++|+.+...     -.|++.|+.++..+....      ..  .-..++|.++++.|+.+..+      .
T Consensus       128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i------~~--~~~~~~w~~D~~~~~y~~~~~~~~~~~  199 (686)
T PRK10115        128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELL------DN--VEPSFVWANDSWTFYYVRKHPVTLLPY  199 (686)
T ss_pred             EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccc------cC--cceEEEEeeCCCEEEEEEecCCCCCCC
Confidence            46778899999998876433     368888998765322211      11  11458999998866665432      3


Q ss_pred             cEEEEeC-CC--ccEEeecccCCCeE-EEEEcCCCCEEEEEeC---CCcEEEEeCC--CceeEEEeeccCCce-eEEEee
Q psy17902        213 NIKLWSS-SL--EHLHTFTGHKAPIT-GLAISFECDTLYSSSN---DRSIKVWNIE--DRAYVETLFGHQSAI-TSLDIL  282 (454)
Q Consensus       213 ~v~vw~~-~~--~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~---dg~i~iwd~~--~~~~~~~~~~~~~~v-~~~~~~  282 (454)
                      .|..+++ +.  .....+........ .+..+.++++++..+.   ++.+.+|+..  ++.....+ .+...+ ..+. +
T Consensus       200 ~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~-~  277 (686)
T PRK10115        200 QVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFL-PRRKDHEYSLD-H  277 (686)
T ss_pred             EEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEE-ECCCCCEEEEE-e
Confidence            6777777 33  22333433333333 3333447777665543   4578888842  33322222 222222 2222 2


Q ss_pred             cCCCEEEEeeC---CCcEEEeeccC-CeEEEEccc-c-CCeEEEEecCCCEEEEEeCCCCEEEEecCC-Cccceeeeccc
Q psy17902        283 AKNRVISSGGT---DKSVRVWKIQE-ESQLVFNGH-S-RGIDMTRRVNDQQFITCGEDGTLSLWSILK-KVPTHTIPVAH  355 (454)
Q Consensus       283 ~~~~~l~~~~~---dg~i~i~d~~~-~~~~~~~~~-~-~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~  355 (454)
                      ..+.+++....   ...|...++.. .....+..+ . ..+..+.+..+..+++...+|.-+++-+.. +..+..+....
T Consensus       278 ~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~  357 (686)
T PRK10115        278 YQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDD  357 (686)
T ss_pred             CCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCceEEecCCC
Confidence            22333332222   22344444442 222223333 2 345555555555566666677666554432 22233322110


Q ss_pred             CCCCCCCCCCcEEEEEEe--cCCC-EEEEecC---CCcEEEEEcCCCc
Q psy17902        356 GYDSSSSEPNWITSVACL--HNSD-LVASGSY---DGCVKLWKITPKR  397 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s--~~~~-~l~~~~~---dg~v~iwd~~~~~  397 (454)
                              +..+..+.++  +++. ++++.+.   -+.+..+|+.+++
T Consensus       358 --------~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~  397 (686)
T PRK10115        358 --------PAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE  397 (686)
T ss_pred             --------CceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence                    1113333344  3333 4443332   3568888887653

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.05  E-value=0.24  Score=48.40  Aligned_cols=107  Identities=10%  Similarity=0.176  Sum_probs=70.0

Q ss_pred             EEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec--ccCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeCC---------
Q psy17902        195 ALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT--GHKAPITGLAIS--FECDTLYSSSNDRSIKVWNIE---------  261 (454)
Q Consensus       195 ~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~---------  261 (454)
                      -+.-+.-++..++-+....+.|||.....+..-.  ...+.|..+.|.  |+++.+++.|..+.|.+|.-.         
T Consensus        34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p  113 (631)
T PF12234_consen   34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGP  113 (631)
T ss_pred             eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCc
Confidence            3334444444444444568999999544432222  357899999995  688999999999999998542         


Q ss_pred             CceeEEEe--eccC-CceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        262 DRAYVETL--FGHQ-SAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       262 ~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      +...+..+  ..|+ .+|.+..|.++|.+++.+  .+.+.|+|-.
T Consensus       114 ~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~  156 (631)
T PF12234_consen  114 SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW  156 (631)
T ss_pred             ccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence            11223222  2344 679999999998776643  4578888753

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>KOG3630|consensus

Probab=96.01  E-value=0.12  Score=52.43  Aligned_cols=140  Identities=10%  Similarity=-0.010  Sum_probs=85.0

Q ss_pred             CceEEEEEeCCCcEEEEec--CCCcEEEEeCCCcc------EEee------cccCCCeEEEEEcCCC-CEEEEEeCCCcE
Q psy17902        191 PPILALAVANNNELVASGD--NNSNIKLWSSSLEH------LHTF------TGHKAPITGLAISFEC-DTLYSSSNDRSI  255 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~--~dg~v~vw~~~~~~------~~~~------~~~~~~v~~~~~~~~~-~~l~~~~~dg~i  255 (454)
                      -+|..+...+|+...++..  .+-.|..||+..-.      ..-+      ........++.|+|.- ...++...|+.|
T Consensus       101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl  180 (1405)
T KOG3630|consen  101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL  180 (1405)
T ss_pred             ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence            3566666677766554433  33478889972111      1111      1223345678888853 346667788999


Q ss_pred             EEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcc----ccCCeEEEEecCCCEEEE
Q psy17902        256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNG----HSRGIDMTRRVNDQQFIT  330 (454)
Q Consensus       256 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----~~~~i~~~~~~~~~~l~~  330 (454)
                      ++..+........-......+++++|+|.|+.++.|-..|++.-|-..-.....+..    ....+.++.|.....|++
T Consensus       181 ~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflv  259 (1405)
T KOG3630|consen  181 RVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLV  259 (1405)
T ss_pred             hhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEE
Confidence            988876443322222356678999999999999999999999888655432221111    134566777765544443

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.94  E-value=1.1  Score=39.82  Aligned_cols=231  Identities=11%  Similarity=0.081  Sum_probs=105.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc-
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH-  223 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~-  223 (454)
                      ..+|.|..+ ..+++ +..| +.+...+.+..-..+.....   .......+....++..++++. .|.|..=.-.+.. 
T Consensus        64 l~~I~f~~~-~g~iv-G~~g-~ll~T~DgG~tW~~v~l~~~---lpgs~~~i~~l~~~~~~l~~~-~G~iy~T~DgG~tW  136 (302)
T PF14870_consen   64 LNSISFDGN-EGWIV-GEPG-LLLHTTDGGKTWERVPLSSK---LPGSPFGITALGDGSAELAGD-RGAIYRTTDGGKTW  136 (302)
T ss_dssp             EEEEEEETT-EEEEE-EETT-EEEEESSTTSS-EE----TT----SS-EEEEEEEETTEEEEEET-T--EEEESSTTSSE
T ss_pred             EEEEEecCC-ceEEE-cCCc-eEEEecCCCCCcEEeecCCC---CCCCeeEEEEcCCCcEEEEcC-CCcEEEeCCCCCCe
Confidence            567777643 34444 4445 44445555544333332111   112333444444554444443 4554332222222 


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      ......-.+.+..+.-+++|.++++++......-||.....-...-......|.+|.|.|++.+.+.+ ..|.|++=+..
T Consensus       137 ~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~  215 (302)
T PF14870_consen  137 QAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDP  215 (302)
T ss_dssp             EEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-T
T ss_pred             eEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCC
Confidence            22234455778888889999988888665555678765432232333456889999999998776644 88888877622


Q ss_pred             C-CeEEE---Ecc--ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        304 E-ESQLV---FNG--HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       304 ~-~~~~~---~~~--~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                      . .....   ...  ..-.+..+.+.+.+.+.+++..|.+. .....++.-...+.....      +.-+..+.|.++.+
T Consensus       216 ~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G~l~-~S~DgGktW~~~~~~~~~------~~n~~~i~f~~~~~  288 (302)
T PF14870_consen  216 DDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGSGTLL-VSTDGGKTWQKDRVGENV------PSNLYRIVFVNPDK  288 (302)
T ss_dssp             TEEEEE---B-TTSS--S-EEEEEESSSS-EEEEESTT-EE-EESSTTSS-EE-GGGTTS------SS---EEEEEETTE
T ss_pred             CCccccccccCCcccCceeeEEEEecCCCCEEEEeCCccEE-EeCCCCccceECccccCC------CCceEEEEEcCCCc
Confidence            1 11111   111  22234555666666666666677553 344445444444332211      22278888887655


Q ss_pred             EEEEecCCCcEEEE
Q psy17902        378 LVASGSYDGCVKLW  391 (454)
Q Consensus       378 ~l~~~~~dg~v~iw  391 (454)
                      -++.| .+|.|--|
T Consensus       289 gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  289 GFVLG-QDGVLLRY  301 (302)
T ss_dssp             EEEE--STTEEEEE
T ss_pred             eEEEC-CCcEEEEe
Confidence            55555 56766544

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.92  E-value=1.4  Score=40.85  Aligned_cols=99  Identities=15%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             ceEEEEEeCCCcEEEEec-----------CCC-cEEEEeC---CCc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCc
Q psy17902        192 PILALAVANNNELVASGD-----------NNS-NIKLWSS---SLE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRS  254 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~-----------~dg-~v~vw~~---~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  254 (454)
                      ....|+|.++|+++++-.           ..+ .|.+++-   ++.  ....+...-.....|++.+++  |++++....
T Consensus        15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~i   92 (367)
T TIGR02604        15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPDI   92 (367)
T ss_pred             CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCeE
Confidence            566789999998777643           123 6767654   222  223443334456889998888  444444443


Q ss_pred             EEEEeCCC-------ceeE-EEeec----cCCceeEEEeecCCCEEEEee
Q psy17902        255 IKVWNIED-------RAYV-ETLFG----HQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       255 i~iwd~~~-------~~~~-~~~~~----~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      .++.|...       .+.+ ..+..    +......+.|.|+|.+.++-+
T Consensus        93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G  142 (367)
T TIGR02604        93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG  142 (367)
T ss_pred             EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence            33435432       1112 12221    134477899999998766544

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.89  E-value=0.85  Score=45.18  Aligned_cols=147  Identities=14%  Similarity=0.180  Sum_probs=91.5

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecc----cCCccc------------CCCCCCceEEEEEeC--CCcEEEEecCCCcEE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCS----SPFVKT------------DRKSYPPILALAVAN--NNELVASGDNNSNIK  215 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~------------~~~~~~~v~~~~~~~--~~~~l~~~~~dg~v~  215 (454)
                      .++|+++. .+.|.||++........    +.+...            .......|+.|....  +...|+.+..||.|.
T Consensus        49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~  127 (717)
T PF08728_consen   49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL  127 (717)
T ss_pred             CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence            67787766 58999999875433211    000000            000222466665443  456899999999999


Q ss_pred             EEeCC--------C----c---------cEEeecccCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeCCCc--ee-EEEe
Q psy17902        216 LWSSS--------L----E---------HLHTFTGHKAPITGLAIS--FECDTLYSSSNDRSIKVWNIEDR--AY-VETL  269 (454)
Q Consensus       216 vw~~~--------~----~---------~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~--~~-~~~~  269 (454)
                      +|.+.        .    .         +...+. ....+++++++  ...++||+++....|.||-....  +. ...-
T Consensus       128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s  206 (717)
T PF08728_consen  128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPS  206 (717)
T ss_pred             EEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccc
Confidence            99641        1    0         111112 34578899998  77788888888888887755431  11 1111


Q ss_pred             eccCCceeEEEeecCC---C---EEEEeeCCCcEEEeec
Q psy17902        270 FGHQSAITSLDILAKN---R---VISSGGTDKSVRVWKI  302 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~---~---~l~~~~~dg~i~i~d~  302 (454)
                      ..|...|.+|+|.++.   .   .+++++-.|.+.+|++
T Consensus       207 ~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  207 HQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             cccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            1356678899997653   2   7788899999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>KOG2280|consensus

Probab=95.87  E-value=1.3  Score=43.38  Aligned_cols=196  Identities=6%  Similarity=0.065  Sum_probs=102.5

Q ss_pred             eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc
Q psy17902        145 ITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH  223 (454)
Q Consensus       145 V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~  223 (454)
                      +.++..+|..- -++  +.--.|+|+++.. ..+..+..      ....+..+.|+.+.. |++...+|+++||++.+..
T Consensus        46 pIAV~r~p~~~~~~~--~a~~~I~If~~sG-~lL~~~~w------~~~~lI~mgWs~~ee-LI~v~k~g~v~Vy~~~ge~  115 (829)
T KOG2280|consen   46 PIAVTRSPSKLVPLY--SARPYIRIFNISG-QLLGRILW------KHGELIGMGWSDDEE-LICVQKDGTVHVYGLLGEF  115 (829)
T ss_pred             ceEEEeccccccccc--ccceeEEEEeccc-cchHHHHh------cCCCeeeecccCCce-EEEEeccceEEEeecchhh
Confidence            55666666321 111  3335688888764 44433332      233788999997765 5666789999999996655


Q ss_pred             EEee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec---cCCceeEEEeecCC---CEEEEee-
Q psy17902        224 LHTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG---HQSAITSLDILAKN---RVISSGG-  292 (454)
Q Consensus       224 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~---~~l~~~~-  292 (454)
                      +...    ......|..+.|..+|-.+++  .+|.+.+-+-.....+..+..   ...+-.|-...+++   ..++-.. 
T Consensus       116 ie~~svg~e~~~~~I~ec~~f~~GVavlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~  193 (829)
T KOG2280|consen  116 IESNSVGFESQMSDIVECRFFHNGVAVLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDV  193 (829)
T ss_pred             hcccccccccccCceeEEEEecCceEEEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeech
Confidence            5442    223334555555556643333  455555543222222222221   11111222222222   1111111 


Q ss_pred             CCCcEEEeecc--CCeEEEE-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        293 TDKSVRVWKIQ--EESQLVF-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       293 ~dg~i~i~d~~--~~~~~~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      ..+ ..++...  ..+...+ ..+...+.+..+++..+|+.-...|.|.+-+....+....+..
T Consensus       194 ~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~  256 (829)
T KOG2280|consen  194 AVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNC  256 (829)
T ss_pred             hhh-hcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCC
Confidence            011 1111111  1122222 2234555667777888999999999999998887777766653

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.59  E-value=0.41  Score=46.79  Aligned_cols=112  Identities=13%  Similarity=0.130  Sum_probs=73.9

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe--CCCcEEEEecCCCcEEEEeC-
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA--NNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      ..+.-+.-|.-++..++-+....+.|||...+.......+     .....|.++.|.  |+++.+++.+..+.|.+|.- 
T Consensus        30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-----~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~  104 (631)
T PF12234_consen   30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-----SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQL  104 (631)
T ss_pred             CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-----cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEcc
Confidence            3445555555555555544556899999988775544433     356789999986  57888888888899998863 


Q ss_pred             -----C----CccEEe--ecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        220 -----S----LEHLHT--FTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       220 -----~----~~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                           +    ...+..  +..|+ .+|.+..|.++|.+++.+  ++.+.|+|-.
T Consensus       105 R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv~dk~  156 (631)
T PF12234_consen  105 RYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFVFDKW  156 (631)
T ss_pred             chhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEEECCC
Confidence                 1    112222  23344 689999999998655544  3568888743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=95.56  E-value=2.6  Score=41.16  Aligned_cols=249  Identities=14%  Similarity=0.142  Sum_probs=121.3

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCce-ecccCCcccCCCC-CCceEEEEEeCCC-cEEEEecCCCc--EEEEeC-CCccE
Q psy17902        151 TSDSKHVYSACKDGIIIKWLLETRSK-VCSSPFVKTDRKS-YPPILALAVANNN-ELVASGDNNSN--IKLWSS-SLEHL  224 (454)
Q Consensus       151 s~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~-~~~v~~~~~~~~~-~~l~~~~~dg~--v~vw~~-~~~~~  224 (454)
                      ..++..++.+..+|.+....+..... +....+     +. .....++++..++ .+|+.|+..|.  +.-|.. ....+
T Consensus       219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~-----g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~  293 (504)
T PF10433_consen  219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYL-----GTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVL  293 (504)
T ss_dssp             STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEE-----EE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEE
T ss_pred             cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEc-----CCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEE
Confidence            45677899999999998887765432 111111     12 3456677777665 36677766554  444443 22333


Q ss_pred             EeecccCCCeEEEEEcCC----CC------EEEEEe---CCCcEEEEeCCCcee--EEEeecc--CCceeEEEeec-CCC
Q psy17902        225 HTFTGHKAPITGLAISFE----CD------TLYSSS---NDRSIKVWNIEDRAY--VETLFGH--QSAITSLDILA-KNR  286 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~~----~~------~l~~~~---~dg~i~iwd~~~~~~--~~~~~~~--~~~v~~~~~~~-~~~  286 (454)
                      ..+. .-++|..+++.+.    ..      .|++++   .+|.+++..-.-+-.  .......  -..++.+.... ++.
T Consensus       294 ~~~~-N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~  372 (504)
T PF10433_consen  294 DSLP-NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHS  372 (504)
T ss_dssp             EEE-----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBS
T ss_pred             Eecc-CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCce
Confidence            3343 4578888888531    12      566654   467888875321111  1111112  23344444332 145


Q ss_pred             EEEEeeCCCcEEEeecc---CCeEE-EE-----ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902        287 VISSGGTDKSVRVWKIQ---EESQL-VF-----NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~---~~~~~-~~-----~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      +|+.+..+ .-+++.+.   ....+ ..     ......+.+... .++.++=.+..+ |++.+....+.........+.
T Consensus       373 ~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~-~~~~ivQVt~~~-i~l~~~~~~~~~~~w~~~~~~  449 (504)
T PF10433_consen  373 YLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNV-GDGRIVQVTPKG-IRLIDLEDGKLTQEWKPPAGS  449 (504)
T ss_dssp             EEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEE-TTTEEEEEESSE-EEEEESSSTSEEEEEE-TTS-
T ss_pred             EEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEc-CCCeEEEEecCe-EEEEECCCCeEEEEEeCCCCC
Confidence            66655544 45566664   22222 11     111112222222 366666666554 888887776666655433221


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC---CCceeeeEEEEcC
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI---PLSGVINSLVFTS  418 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~v~~l~~s~  418 (454)
                              .|.+.+.  ++.+++.+..++.+.++.+............   .....|.|+..+|
T Consensus       450 --------~I~~a~~--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p  503 (504)
T PF10433_consen  450 --------IIVAASI--NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP  503 (504)
T ss_dssp             ----------SEEEE--SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred             --------eEEEEEE--CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence                    1555544  4456777777888999999876554332211   1346688887766

...

>KOG1983|consensus

Probab=95.40  E-value=0.49  Score=49.60  Aligned_cols=229  Identities=11%  Similarity=0.041  Sum_probs=105.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE  222 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~  222 (454)
                      .....++|+|...++|.|+..|.|.+|-...-+.........     .-.+..+.+-.....+.....+..+.+|.....
T Consensus        36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~-----~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~  110 (993)
T KOG1983|consen   36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQN-----QINVTRIELLVGISRNLVLSDDDSLHLWSIKIK  110 (993)
T ss_pred             CCCcceeeccccceEEEEEecccEEEecccceEEEecccccc-----chhhhheeeeecccccceeecccceeeeccccc
Confidence            456788999999999999999999999655433332222100     001111112111112222233344555544211


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE-EeeccCCceeEE-EeecCC-CE-EEEeeCCCcEE
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE-TLFGHQSAITSL-DILAKN-RV-ISSGGTDKSVR  298 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~-~~~~~~-~~-l~~~~~dg~i~  298 (454)
                      ..   -.+...+++....+--.. +.+ ..+.+++||..-..... .+.+....-... .+.+.. .. ......+  -.
T Consensus       111 ~~---~~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--~~  183 (993)
T KOG1983|consen  111 TG---VFLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLD--TV  183 (993)
T ss_pred             ce---eecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccc--cc
Confidence            11   112233333333222223 444 77888888865322111 011100000000 000000 00 0000000  11


Q ss_pred             EeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        299 VWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       299 i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                      +|.+.-.. ..+..+...+.+........++.+..-+.+-+|+.........+....              ..+++++..
T Consensus       184 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~  248 (993)
T KOG1983|consen  184 LISLPDAY-LGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNG--------------QLESRDGSH  248 (993)
T ss_pred             eeeccccc-ccccccccccceeeeecCCCcceeeeeeeeeehhcccccchhhccccc--------------ccCccCCce
Confidence            11111111 122223333344444444445556666777777765554444443222              112778999


Q ss_pred             EEEecCCCcEEEEEcCCCce
Q psy17902        379 VASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       379 l~~~~~dg~v~iwd~~~~~~  398 (454)
                      ++++..||.+.+||...+..
T Consensus       249 ~v~~h~Dgs~~fWd~s~g~~  268 (993)
T KOG1983|consen  249 FVSYHTDGSYAFWDVSSGKL  268 (993)
T ss_pred             EEEEEecCCEEeeecCCCce
Confidence            99999999999999998744

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=95.40  E-value=1.2  Score=36.45  Aligned_cols=180  Identities=9%  Similarity=0.056  Sum_probs=100.2

Q ss_pred             CCcEEEEecC--CCcEEEEeCC-CccEEeecccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEeCCCceeEEEeeccCCce
Q psy17902        201 NNELVASGDN--NSNIKLWSSS-LEHLHTFTGHKAPITGLAISFECDTLYS-SSNDRSIKVWNIEDRAYVETLFGHQSAI  276 (454)
Q Consensus       201 ~~~~l~~~~~--dg~v~vw~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v  276 (454)
                      +|.++.+.+.  ...|++|+++ ++.+....-....+..=-...-+.++.. .-.+|.-..+|.++.+++..+. ..+.-
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeG  133 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEG  133 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcc
Confidence            4566666654  3579999995 5555443322122222111122333332 2357888999999888777663 44455


Q ss_pred             eEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCC---eEEEEecCCCEEEEEeCCCCEEEEecCCCcccee
Q psy17902        277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRG---IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHT  350 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~---i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  350 (454)
                      ..++.  ++..|+.+....+++.-|..+....   .......+   ++-+.+.++..++-.-.+..|...+..+++.+..
T Consensus       134 WgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t~~I~rI~p~sGrV~~w  211 (262)
T COG3823         134 WGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQTTRIARIDPDSGRVVAW  211 (262)
T ss_pred             eeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeeecceEEEcCCCCcEEEE
Confidence            66654  4555666655567777776554332   22222222   2344555666665555666677777777777666


Q ss_pred             eecccCCC---CCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902        351 IPVAHGYD---SSSSEPNWITSVACLHNSD-LVASGS  383 (454)
Q Consensus       351 ~~~~~~~~---~~~~~~~~i~~~~~s~~~~-~l~~~~  383 (454)
                      +....-..   ....+.+..+.+++.|++. ++++|-
T Consensus       212 idlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK  248 (262)
T COG3823         212 IDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK  248 (262)
T ss_pred             EEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence            65432211   1122445588899999885 555553

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=95.23  E-value=2.3  Score=38.67  Aligned_cols=111  Identities=16%  Similarity=0.241  Sum_probs=68.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCe------EEEEEcCCC----cee---cccCCcccC----CCCCCceEEEEEeCCCc
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGI------IIKWLLETR----SKV---CSSPFVKTD----RKSYPPILALAVANNNE  203 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~------i~iwd~~~~----~~~---~~~~~~~~~----~~~~~~v~~~~~~~~~~  203 (454)
                      .-+.++.|.+.+++..+++.+.+|.      +..+++...    ..+   ....+....    .......-+|++.+++.
T Consensus        18 ~~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~   97 (326)
T PF13449_consen   18 PFGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS   97 (326)
T ss_pred             ccCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence            4456899999976667777777887      666655431    000   011110000    00111344788878888


Q ss_pred             EEEEecCC------CcEEEEeCCCccEEee---------------cccCCCeEEEEEcCCCCEEEEEeC
Q psy17902        204 LVASGDNN------SNIKLWSSSLEHLHTF---------------TGHKAPITGLAISFECDTLYSSSN  251 (454)
Q Consensus       204 ~l~~~~~d------g~v~vw~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~  251 (454)
                      ++++.-.+      ..|..++..+..+..+               ...+..+-+|+++|+|+.|+++..
T Consensus        98 ~~is~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E  166 (326)
T PF13449_consen   98 FWISSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAME  166 (326)
T ss_pred             EEEEeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEEC
Confidence            88887767      7888888765554333               123456889999999997777654

>KOG2063|consensus

Probab=95.07  E-value=2.3  Score=43.42  Aligned_cols=69  Identities=26%  Similarity=0.283  Sum_probs=41.3

Q ss_pred             EcCCCCEEEEEeCCCeEEEEEcCCCceecccCC----ccc-CCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        150 VTSDSKHVYSACKDGIIIKWLLETRSKVCSSPF----VKT-DRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       150 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      +..-|+.|+.|+.+|.+.+|.+.+.........    ... ..-+..+|..+...+.-.++++-+ |+.|.++++
T Consensus        22 va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~-dsqi~~~~l   95 (877)
T KOG2063|consen   22 VAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILS-DSQIAVHKL   95 (877)
T ss_pred             HHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheec-CCcceeeec
Confidence            334578999999999999998876533222111    000 001234666666666555555444 567777776

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=94.97  E-value=0.73  Score=42.29  Aligned_cols=227  Identities=11%  Similarity=0.115  Sum_probs=123.3

Q ss_pred             CCCcEEEEecCCCcEEEEeCCCccE-----EeecccCCCeEEEEEcCCC--------CEEEEEeCCCcEEEEeCCC----
Q psy17902        200 NNNELVASGDNNSNIKLWSSSLEHL-----HTFTGHKAPITGLAISFEC--------DTLYSSSNDRSIKVWNIED----  262 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~~~~~~-----~~~~~~~~~v~~~~~~~~~--------~~l~~~~~dg~i~iwd~~~----  262 (454)
                      |...+++.|..+|.+.+...+....     ..|....   .-++..+.+        .+.++.+.+....+++...    
T Consensus       125 ~gqp~~alglsngqv~v~qp~~s~t~p~pg~~Fp~g~---~p~aLd~qgr~leh~~~~lalA~~~~~qf~~~~~t~~~~~  201 (733)
T COG4590         125 PGQPWFALGLSNGQVAVVQPQLSHTMPTPGREFPPGL---EPLALDEQGRLLEHPLQQLALALTAEAQFATYDNTQQIQI  201 (733)
T ss_pred             CCCceEEEeccCCeEEEEeccccccCCCCCccCCCCC---CccccCcccCcccchHHHhhhccchhhHHHHhhhhhhhhh
Confidence            4556888999999999987522111     1111111   111222222        2334444455444554432    


Q ss_pred             --------ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEc-cccCC----eE-EE-EecCC
Q psy17902        263 --------RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFN-GHSRG----ID-MT-RRVND  325 (454)
Q Consensus       263 --------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~-~~~~~----i~-~~-~~~~~  325 (454)
                              ++.+..+......|..+-..|+|+.+..-+. ..+.++++.+....  .+. ...+.    ++ .. ....+
T Consensus       202 L~g~~t~q~e~i~~L~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg  280 (733)
T COG4590         202 LRGDRTTQQEIIRLLSVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGG  280 (733)
T ss_pred             hhcccCchhhhhhhcCCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCc
Confidence                    2223334445567888889999998876654 67889988765433  111 11111    11 11 12345


Q ss_pred             CEEEEEeCCCCEEEE-ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        326 QQFITCGEDGTLSLW-SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       326 ~~l~~~~~dg~i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      -.+++++.||-|.-| |.+.... ..+......   .-.+..+..+.-..+.+-+++-+.+|++.++.....+.+-.-. 
T Consensus       281 ~SLLv~~~dG~vsQWFdvr~~~~-p~l~h~R~f---~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-  355 (733)
T COG4590         281 FSLLVVHEDGLVSQWFDVRRDGQ-PHLNHIRNF---KLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-  355 (733)
T ss_pred             eeEEEEcCCCceeeeeeeecCCC-Ccceeeecc---ccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh-
Confidence            568889999999887 4433221 111110000   0012223333333345578888889999888765544443222 


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                        .-..+.-+++||.+.+|++-  +.|.++++...
T Consensus       356 --~~~~~~~~~~Sp~~~~Ll~e--~~gki~~~~l~  386 (733)
T COG4590         356 --AYQAPQLVAMSPNQAYLLSE--DQGKIRLAQLE  386 (733)
T ss_pred             --hhcCcceeeeCcccchheee--cCCceEEEEec
Confidence              22356678999999999876  66777766543

>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A

Probab=94.85  E-value=4.2  Score=39.66  Aligned_cols=238  Identities=18%  Similarity=0.192  Sum_probs=104.3

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCC---------ccEEeecccCCCeEEEEEcC-----CCCEEEE--EeCCC-
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSL---------EHLHTFTGHKAPITGLAISF-----ECDTLYS--SSNDR-  253 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~---------~~~~~~~~~~~~v~~~~~~~-----~~~~l~~--~~~dg-  253 (454)
                      ..-..++..|.|+.++.+...|.+.|+-+..         ..+.........|..++|.+     +...|+.  ....+ 
T Consensus        44 ~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~  123 (504)
T PF10433_consen   44 QPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPIKSEGNILDMCFLHPSVGYDNPTLAILYVDSQRR  123 (504)
T ss_dssp             TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE--S-SEEEEEEEES---S-SS-EEEEEEEETT-E
T ss_pred             cCCcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccccCCceEEEEEEEecccCCCCceEEEEEEEeccc
Confidence            3566789999999999999999999998844         01101111256788888875     2234433  22222 


Q ss_pred             -cEEE--EeCCCceeE------EE--e-eccCCceeEEEeecC-CCEEEEeeCCCcEEEeeccC--C--eEEEEc---cc
Q psy17902        254 -SIKV--WNIEDRAYV------ET--L-FGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQE--E--SQLVFN---GH  313 (454)
Q Consensus       254 -~i~i--wd~~~~~~~------~~--~-~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~--~--~~~~~~---~~  313 (454)
                       .+..  |+...+-..      ..  + ..+..+..-+.. |. ...+++++. +.+.+-+...  +  ......   ..
T Consensus       124 ~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIPl-p~~~ggllV~~~-~~i~y~~~~~~~~~~~~~~~~~~~~~  201 (504)
T PF10433_consen  124 THLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIPL-PNPPGGLLVGGE-NIIIYKNHLIGSGDYSFLSIPSPPSS  201 (504)
T ss_dssp             EEEEEEE--------EETTTTEEEE--EEEE-TTEEEEEE--TTT-SEEEEES-SEEEEEE------TTEEEEE--H-HH
T ss_pred             ceeEEEeeecccccceeeeeccccccccccCCCccEEEEc-CCCCcEEEEECC-EEEEEecccccccccccccccCCccC
Confidence             2333  333322110      00  1 011222222222 23 233333433 3333322211  1  112221   11


Q ss_pred             cCCe-EEEE--------ecCCCEEEEEeCCCCEEEEecCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCC-CEEEEe
Q psy17902        314 SRGI-DMTR--------RVNDQQFITCGEDGTLSLWSILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASG  382 (454)
Q Consensus       314 ~~~i-~~~~--------~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~  382 (454)
                      ...+ ....        ..++..++.+..+|.+....+..... +........       ....+++.+..+| .+|+.|
T Consensus       202 ~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~-------~~~~s~l~~l~~g~d~lf~g  274 (504)
T PF10433_consen  202 SSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTL-------CSIASSLTYLKNGGDYLFVG  274 (504)
T ss_dssp             HTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE---------S-ESEEEEESTT--EEEEE
T ss_pred             CCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCc-------CChhheEEEEcCCCEEEEEE
Confidence            1222 2222        22466889999999999888765432 111111110       1115566666665 466667


Q ss_pred             cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC----CC------EEEEEec--CCCceeeeee
Q psy17902        383 SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD----HK------HLVAGIG--TEHRFGRWKT  438 (454)
Q Consensus       383 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d----~~------~l~~~~~--~d~~i~~W~~  438 (454)
                      +.-|.=.++.+. ...+..+.....-+||.++++.+.    ..      .|++++|  .+|.+++...
T Consensus       275 s~~gds~l~~~~-~~~l~~~~~~~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~  341 (504)
T PF10433_consen  275 SEFGDSQLLQIS-LSNLEVLDSLPNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN  341 (504)
T ss_dssp             ESSS-EEEEEEE-SESEEEEEEE----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE
T ss_pred             EecCCcEEEEEe-CCCcEEEEeccCcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec
Confidence            654443333333 233444444447789999998632    22      5555534  6888888765

...

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=94.80  E-value=3.3  Score=38.13  Aligned_cols=39  Identities=10%  Similarity=0.093  Sum_probs=21.2

Q ss_pred             CcEEEeeccCCeEEEEcccc---CCeEEEEecCCCEEEEEeC
Q psy17902        295 KSVRVWKIQEESQLVFNGHS---RGIDMTRRVNDQQFITCGE  333 (454)
Q Consensus       295 g~i~i~d~~~~~~~~~~~~~---~~i~~~~~~~~~~l~~~~~  333 (454)
                      ..+.+||..+.+-.......   ..-..+...++..++.|+.
T Consensus       168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~~~~iyv~GG~  209 (346)
T TIGR03547       168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIVHKGNKLLLINGE  209 (346)
T ss_pred             ceEEEEECCCCceeECccCCCCcCCCceEEEECCEEEEEeee
Confidence            45788888876555322211   1123344456667777764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.78  E-value=1.3  Score=33.51  Aligned_cols=112  Identities=12%  Similarity=0.109  Sum_probs=71.9

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEeCCCce--------eEEEeeccCCceeEEEeec-----CCCEEEEeeCCCcEEEeec
Q psy17902        236 GLAISFECDTLYSSSNDRSIKVWNIEDRA--------YVETLFGHQSAITSLDILA-----KNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       236 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~i~i~d~  302 (454)
                      .-.|......|++++.-|.|.|++.....        .+..+ .-...|++|+--+     ....|+.|+ ...+..||+
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV   80 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDV   80 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEc
Confidence            34566666788999999999999876432        23333 3456677776543     235666665 557999999


Q ss_pred             cCCeEEEEccccCCeEEEEec----CCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        303 QEESQLVFNGHSRGIDMTRRV----NDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       303 ~~~~~~~~~~~~~~i~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      ..+..+.+..-...+.++.+-    ...-++..+.+..|.-||........
T Consensus        81 ~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fW  131 (136)
T PF14781_consen   81 ENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFW  131 (136)
T ss_pred             ccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEE
Confidence            998888777666777666542    12345555556666666655444333

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=94.69  E-value=2.8  Score=36.79  Aligned_cols=225  Identities=10%  Similarity=0.051  Sum_probs=121.7

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCC-------ceecccCCcccCCCCCCceEEEEEeCCCcE------------E
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETR-------SKVCSSPFVKTDRKSYPPILALAVANNNEL------------V  205 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~------------l  205 (454)
                      -+.|+|+|.+.+-++....+...+||....       .....++... ........+.+.|+....+            +
T Consensus        25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~-~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPP-PLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCC-CCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            478999999988888777899999998721       1111111100 0112345677777754333            5


Q ss_pred             EEecCCCcEEEEeCC--Cc----cEEeec-ccCCCe-EEEEEcC--CCCEEEEEe-CCCcEEEEeCCCceeE--EEeecc
Q psy17902        206 ASGDNNSNIKLWSSS--LE----HLHTFT-GHKAPI-TGLAISF--ECDTLYSSS-NDRSIKVWNIEDRAYV--ETLFGH  272 (454)
Q Consensus       206 ~~~~~dg~v~vw~~~--~~----~~~~~~-~~~~~v-~~~~~~~--~~~~l~~~~-~dg~i~iwd~~~~~~~--~~~~~~  272 (454)
                      +.++++|+|.-|...  ..    ....+. ...+.| ..+++..  .+.+|+.+. ..++|-|+|-.=....  ..+...
T Consensus       104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP  183 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP  183 (336)
T ss_pred             EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence            677899999999961  11    222232 222333 3555553  356666664 4788999985422110  001000


Q ss_pred             ----------------CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCC----eEEEEec------CCC
Q psy17902        273 ----------------QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG----IDMTRRV------NDQ  326 (454)
Q Consensus       273 ----------------~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----i~~~~~~------~~~  326 (454)
                                      .-.|+-..-.++.+.=+.|.--|.|-+||+...-...+ .+...    .-++..+      .+.
T Consensus       184 ~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~-as~g~LNaPWG~a~APa~FG~~sg~  262 (336)
T TIGR03118       184 ALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRV-ASSGRLNAPWGLAIAPESFGSLSGA  262 (336)
T ss_pred             CCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEe-ccCCcccCCceeeeChhhhCCCCCC
Confidence                            00111111122222223344457899999876544433 22222    2222222      345


Q ss_pred             EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        327 QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       327 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      +|+---.||+|..||..++..+-.+....+..   -....++.|+|-.
T Consensus       263 lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~p---i~i~GLWgL~fGn  307 (336)
T TIGR03118       263 LLVGNFGDGTINAYDPQSGAQLGQLLDPDNHP---VKVDGLWSLTFGN  307 (336)
T ss_pred             eEEeecCCceeEEecCCCCceeeeecCCCCCe---EEecCeEEeeeCC
Confidence            55555589999999999888776665443321   1123377788765

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=94.67  E-value=3.8  Score=38.31  Aligned_cols=81  Identities=14%  Similarity=0.111  Sum_probs=53.7

Q ss_pred             CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec----CC---------------CE--EEEE
Q psy17902        273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV----ND---------------QQ--FITC  331 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~----~~---------------~~--l~~~  331 (454)
                      ...+.+|+.+|.+++.++...-|.|.++|+.++..+.+-.-.....|.+..    ..               ..  ++-+
T Consensus       307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya  386 (415)
T PF14655_consen  307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA  386 (415)
T ss_pred             CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence            345788999999999999888899999999987776322221121222111    00               12  2334


Q ss_pred             eCCCCEEEEecCCCccceeeec
Q psy17902        332 GEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      -..|.|.||.++++..+..+..
T Consensus       387 prRg~lEvW~~~~g~Rv~a~~v  408 (415)
T PF14655_consen  387 PRRGILEVWSMRQGPRVAAFNV  408 (415)
T ss_pred             ccCCeEEEEecCCCCEEEEEEe
Confidence            4789999999998877776654

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=94.67  E-value=0.78  Score=42.81  Aligned_cols=141  Identities=11%  Similarity=0.117  Sum_probs=89.0

Q ss_pred             CCCCEEE-EEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC--------CEEEEeeCCCcEEEeeccCCe-EE--
Q psy17902        241 FECDTLY-SSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN--------RVISSGGTDKSVRVWKIQEES-QL--  308 (454)
Q Consensus       241 ~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~l~~~~~dg~i~i~d~~~~~-~~--  308 (454)
                      .+.++|+ .|+....++-.|++.|+.+..+..|...  -+.|.|..        ..| +|-.+..|.-.|.+... .+  
T Consensus       477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtl-vGlS~~svFrIDPR~~gNKi~v  553 (776)
T COG5167         477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTL-VGLSDYSVFRIDPRARGNKIKV  553 (776)
T ss_pred             CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceE-EeecccceEEecccccCCceee
Confidence            3444444 4555667888899999999888877665  46677643        233 35556666666765422 22  


Q ss_pred             -EEc--cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        309 -VFN--GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       309 -~~~--~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                       ...  ......++......+++++++..|.|++||--.......++..         ...|..+..+.+|.+|++.+..
T Consensus       554 ~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~l---------G~aIk~idvta~Gk~ilaTCk~  624 (776)
T COG5167         554 VESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGL---------GDAIKHIDVTANGKHILATCKN  624 (776)
T ss_pred             eeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCccc---------ccceeeeEeecCCcEEEEeecc
Confidence             111  1122334455556789999999999999996443333333322         2338889999999987776654


Q ss_pred             CcEEEEEcC
Q psy17902        386 GCVKLWKIT  394 (454)
Q Consensus       386 g~v~iwd~~  394 (454)
                       ++.+-|+.
T Consensus       625 -yllL~d~~  632 (776)
T COG5167         625 -YLLLTDVP  632 (776)
T ss_pred             -eEEEEecc
Confidence             67777653

>PRK13684 Ycf48-like protein; Provisional

Probab=94.64  E-value=3.5  Score=37.69  Aligned_cols=152  Identities=11%  Similarity=0.002  Sum_probs=81.5

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE
Q psy17902        231 KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV  309 (454)
Q Consensus       231 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~  309 (454)
                      ...+.++.+.+++.+++++ ..|.+..-.-..++.... ...-...++++.+.+++..++++ ..|.+++=....+..-.
T Consensus       172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~  249 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWS  249 (334)
T ss_pred             cceEEEEEECCCCeEEEEe-CCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccc
Confidence            4578899999987665554 556554321122222222 22345678999999988877655 56766532233332221


Q ss_pred             E-cc----ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        310 F-NG----HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       310 ~-~~----~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      . ..    ....+..+.+.+.+.+++++.+|.|.. ....++.-........      .+.....+.|..++..+++| .
T Consensus       250 ~~~~~~~~~~~~l~~v~~~~~~~~~~~G~~G~v~~-S~d~G~tW~~~~~~~~------~~~~~~~~~~~~~~~~~~~G-~  321 (334)
T PRK13684        250 KPIIPEITNGYGYLDLAYRTPGEIWAGGGNGTLLV-SKDGGKTWEKDPVGEE------VPSNFYKIVFLDPEKGFVLG-Q  321 (334)
T ss_pred             cccCCccccccceeeEEEcCCCCEEEEcCCCeEEE-eCCCCCCCeECCcCCC------CCcceEEEEEeCCCceEEEC-C
Confidence            1 11    112344445555555667777776653 3343433333221111      11237778887777666655 4


Q ss_pred             CCcEEEEE
Q psy17902        385 DGCVKLWK  392 (454)
Q Consensus       385 dg~v~iwd  392 (454)
                      .|.|--|+
T Consensus       322 ~G~il~~~  329 (334)
T PRK13684        322 RGVLLRYV  329 (334)
T ss_pred             CceEEEec
Confidence            67776665

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=94.63  E-value=3.4  Score=37.56  Aligned_cols=104  Identities=12%  Similarity=0.155  Sum_probs=54.2

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCcee---EEEeeccCCce--eEEEeecCCCEEEEeeC-----CCcEEEeeccCCe
Q psy17902        242 ECDTLYSSSND-----RSIKVWNIEDRAY---VETLFGHQSAI--TSLDILAKNRVISSGGT-----DKSVRVWKIQEES  306 (454)
Q Consensus       242 ~~~~l~~~~~d-----g~i~iwd~~~~~~---~~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~  306 (454)
                      ++.+++.|+.+     ..+..||+.+...   ...+..-..+.  .+++.. ++++.+.|+.     ...+..||+.+.+
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~  150 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQE  150 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence            45666777654     3566777766543   12221111111  122222 4666666664     2368888988766


Q ss_pred             EEEEcc---ccCCeEEEEecCCCEEEEEeCCC----CEEEEecCCCc
Q psy17902        307 QLVFNG---HSRGIDMTRRVNDQQFITCGEDG----TLSLWSILKKV  346 (454)
Q Consensus       307 ~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~  346 (454)
                      -.....   ....-.++....+..++.|+.++    .+.+||+.+.+
T Consensus       151 W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~  197 (323)
T TIGR03548       151 WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ  197 (323)
T ss_pred             eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence            543321   11222233445667777777654    34578876643

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=94.51  E-value=0.3  Score=41.28  Aligned_cols=72  Identities=15%  Similarity=0.249  Sum_probs=50.0

Q ss_pred             EcCCCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCC-------CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        150 VTSDSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDR-------KSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       150 ~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      +..++++|++-+.+|.+++||+.+.+..... .+.....       .....|..+.++.+|.-|++-+ +|..+.|+.+.
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            3456789999999999999999988765443 1111111       3456788888888887666654 57888888644


Q ss_pred             c
Q psy17902        222 E  222 (454)
Q Consensus       222 ~  222 (454)
                      .
T Consensus        97 ~   97 (219)
T PF07569_consen   97 G   97 (219)
T ss_pred             c
Confidence            3

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG1916|consensus

Probab=94.24  E-value=0.081  Score=52.35  Aligned_cols=178  Identities=11%  Similarity=-0.018  Sum_probs=102.0

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeC---CCccEEee-----cccCCC
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSS---SLEHLHTF-----TGHKAP  233 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~---~~~~~~~~-----~~~~~~  233 (454)
                      .+.+++-+..+......+.     .+..+.|-.+.|... ...++  -.-|.+.||++   .++....+     ......
T Consensus       110 ~~~vrvaN~~~sm~~~~l~-----kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~  182 (1283)
T KOG1916|consen  110 ENGVRVANQEPSMRHNELA-----KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSD  182 (1283)
T ss_pred             hhhhhhccCcchhHHHHHH-----hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCC
Confidence            3556666655433211111     245567777777431 11122  22377889997   44433222     223334


Q ss_pred             eEEEEEcC---CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE-----------eecCCCEEEEeeCCCcEEE
Q psy17902        234 ITGLAISF---ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD-----------ILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       234 v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~-----------~~~~~~~l~~~~~dg~i~i  299 (454)
                      +.-+.|.|   +.-++..+-.++.|++..++.... ..+.+|...+..++           ++|||..|++++.||.++.
T Consensus       183 ~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f  261 (1283)
T KOG1916|consen  183 PQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGF  261 (1283)
T ss_pred             cceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccce
Confidence            45556654   567778888889998887765432 33445766655443           5789999999999999988


Q ss_pred             eeccCC-e----EE-EEcccc-CCeEEEEecCC----------CEEEEEe-CCCCEEEEecCCCccc
Q psy17902        300 WKIQEE-S----QL-VFNGHS-RGIDMTRRVND----------QQFITCG-EDGTLSLWSILKKVPT  348 (454)
Q Consensus       300 ~d~~~~-~----~~-~~~~~~-~~i~~~~~~~~----------~~l~~~~-~dg~i~iwd~~~~~~~  348 (454)
                      |.+.-. +    ++ ....|. .+..|..+.+.          .++++++ .+..+++|.....+|+
T Consensus       262 ~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl  328 (1283)
T KOG1916|consen  262 YQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL  328 (1283)
T ss_pred             eeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence            876422 1    11 344454 23333333221          2344544 4567999998877777

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=94.22  E-value=1.8  Score=32.78  Aligned_cols=122  Identities=11%  Similarity=0.031  Sum_probs=69.7

Q ss_pred             EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCCCCCCceEEEEEeC-----CCcEEEEecCCCcEEEEeC
Q psy17902        146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDRKSYPPILALAVAN-----NNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~dg~v~vw~~  219 (454)
                      ..-.|......|++++.-|.|.|++.......... ......-.-...|++|+-.+     ....|+.|+. ..+..||+
T Consensus         2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV   80 (136)
T PF14781_consen    2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDV   80 (136)
T ss_pred             eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEc
Confidence            34456666778888898999999986643221110 00000001234677776544     3456777775 67999999


Q ss_pred             CCccEEeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      ....-.-++.-...|+++.+-.   ...-|+..+.+..|.-||....+...+
T Consensus        81 ~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt  132 (136)
T PF14781_consen   81 ENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT  132 (136)
T ss_pred             ccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence            4433333444557788777732   122344444456777777765554443

>PLN02193 nitrile-specifier protein

Probab=94.22  E-value=5.6  Score=38.38  Aligned_cols=143  Identities=12%  Similarity=0.130  Sum_probs=73.8

Q ss_pred             CCcEEEEecCC-----CcEEEEeCCCccEEeeccc-----CCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCcee
Q psy17902        201 NNELVASGDNN-----SNIKLWSSSLEHLHTFTGH-----KAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDRAY  265 (454)
Q Consensus       201 ~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~  265 (454)
                      ++.+.+.|+.+     ..+.+||+....-..+...     ...-.+++. -++++++.|+.++     .+..||+.+.+.
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W  306 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW  306 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence            56677777654     3577888743322222111     111112222 2456677776543     467888876653


Q ss_pred             EEEee-----ccCCceeEEEeecCCCEEEEeeCC----CcEEEeeccCCeEEEEccc-----cCCeEEEEecCCCEEEEE
Q psy17902        266 VETLF-----GHQSAITSLDILAKNRVISSGGTD----KSVRVWKIQEESQLVFNGH-----SRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       266 ~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~~~  331 (454)
                      ...-.     ..... .+++. -++++++.++.+    ..+.+||+.+..-......     ......+...++..++.|
T Consensus       307 ~~~~~~~~~~~~R~~-~~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~G  384 (470)
T PLN02193        307 FHCSTPGDSFSIRGG-AGLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFG  384 (470)
T ss_pred             EeCCCCCCCCCCCCC-cEEEE-ECCcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEEC
Confidence            32110     01111 12222 256677777655    4589999988766544321     112233344466677777


Q ss_pred             eCC--------------CCEEEEecCCCc
Q psy17902        332 GED--------------GTLSLWSILKKV  346 (454)
Q Consensus       332 ~~d--------------g~i~iwd~~~~~  346 (454)
                      +..              ..+.+||+.+..
T Consensus       385 G~~~~~~~~~~~~~~~~ndv~~~D~~t~~  413 (470)
T PLN02193        385 GEIAMDPLAHVGPGQLTDGTFALDTETLQ  413 (470)
T ss_pred             CccCCccccccCccceeccEEEEEcCcCE
Confidence            743              247788886653

>KOG2247|consensus

Probab=94.19  E-value=0.027  Score=51.69  Aligned_cols=139  Identities=17%  Similarity=0.188  Sum_probs=96.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-ecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-GDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~v~vw~~  219 (454)
                      |-.......|-|.+.-++.++.+..+..||-.... .....       .......++|..++..++. +-..+.+.+|++
T Consensus        33 alv~pi~~~w~~e~~nlavaca~tiv~~YD~agq~-~le~n-------~tg~aldm~wDkegdvlavlAek~~piylwd~  104 (615)
T KOG2247|consen   33 ALVGPIIHRWRPEGHNLAVACANTIVIYYDKAGQV-ILELN-------PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDV  104 (615)
T ss_pred             hccccceeeEecCCCceehhhhhhHHHhhhhhcce-ecccC-------CchhHhhhhhccccchhhhhhhcCCCeeechh
Confidence            44444556777877778888888888888865432 22222       3345667888887765444 455789999999


Q ss_pred             CCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        220 SLEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       220 ~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      +......+.   .|....  +.|++....++.+...|.+.|++..+.+.+...-.|...++++++.+.+..+.
T Consensus       105 n~eytqqLE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil  175 (615)
T KOG2247|consen  105 NSEYTQQLESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL  175 (615)
T ss_pred             hhhhHHHHhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence            554443332   233333  68999889999999999999999888776655544999999999988765444

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=94.10  E-value=2.8  Score=34.78  Aligned_cols=101  Identities=11%  Similarity=0.196  Sum_probs=62.4

Q ss_pred             CEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---C---cEEEEe-C-----C
Q psy17902        155 KHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---S---NIKLWS-S-----S  220 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g---~v~vw~-~-----~  220 (454)
                      ..|+.+...+.|.+|++....  ....++       .-+.|..+.++..|+||++--.+   .   .+++|- +     .
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~-------Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~  101 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFS-------TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEE  101 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEc-------chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhccc
Confidence            455554666889999998333  333333       44689999999999999986432   2   566652 1     1


Q ss_pred             CccEE-eecc---------------------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc
Q psy17902        221 LEHLH-TFTG---------------------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR  263 (454)
Q Consensus       221 ~~~~~-~~~~---------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~  263 (454)
                      ..++. .+-+                     -..++.+++..|-...|+.|+. +.+.+|.+...
T Consensus       102 ~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~-~~l~lf~l~~~  165 (215)
T PF14761_consen  102 NSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG-NKLVLFTLKYQ  165 (215)
T ss_pred             CCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC-CEEEEEEEEEE
Confidence            12211 1111                     2346678888886555666654 66889987644

>KOG2247|consensus

Probab=94.00  E-value=0.0052  Score=56.08  Aligned_cols=145  Identities=13%  Similarity=0.157  Sum_probs=103.7

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCceeEE-Ee
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYVE-TL  269 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~-~~  269 (454)
                      ......|.+.+.-++.++.+..+..||-.++...... .++....++|..++..++ .+-..+.+.+||+.+..... .+
T Consensus        36 ~pi~~~w~~e~~nlavaca~tiv~~YD~agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~  114 (615)
T KOG2247|consen   36 GPIIHRWRPEGHNLAVACANTIVIYYDKAGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLES  114 (615)
T ss_pred             ccceeeEecCCCceehhhhhhHHHhhhhhcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhc
Confidence            3445667787777888888889999997666555444 345566788888776554 45567899999998643211 11


Q ss_pred             e-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcc-ccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902        270 F-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNG-HSRGIDMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       270 ~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                      . .|....  +.|++....++.+...|.+.|++..+.+.....+ |...+.+..+...++.+.++.|..+.+
T Consensus       115 gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dcd~~L~v  184 (615)
T KOG2247|consen  115 GGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDCDNTLSV  184 (615)
T ss_pred             cCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCcHHHHHH
Confidence            1 122222  7788888888888899999999999887775556 888888888888888887777665543

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=93.98  E-value=2.5  Score=35.06  Aligned_cols=104  Identities=8%  Similarity=0.129  Sum_probs=62.1

Q ss_pred             CEEEEEeCCCCEEEEecCC--CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC------CcEEEE---EcC
Q psy17902        326 QQFITCGEDGTLSLWSILK--KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD------GCVKLW---KIT  394 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------g~v~iw---d~~  394 (454)
                      +.|+.+...+.|.+|++..  ..+..+++..          +.|..+.++..|+||+|--.+      ..+|+|   ...
T Consensus        29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv----------~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~   98 (215)
T PF14761_consen   29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV----------GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQ   98 (215)
T ss_pred             ceEEEEcCCCEEEEEEcccCCCceeEEEcch----------hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhh
Confidence            4555557778899999983  3445555432          338999999999999985332      256665   211


Q ss_pred             --CCceee-Eec-------------------cCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        395 --PKRTLE-FLQ-------------------DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       395 --~~~~~~-~~~-------------------~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                        ...++. .+-                   .++...++.+++..|-..-|++|  .++.+.+|.....
T Consensus        99 ~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg--~~~~l~lf~l~~~  165 (215)
T PF14761_consen   99 KEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVG--CGNKLVLFTLKYQ  165 (215)
T ss_pred             cccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEE--cCCEEEEEEEEEE
Confidence              111111 111                   11344567777777765555555  4778888876443

>KOG1898|consensus

Probab=93.96  E-value=8.7  Score=39.64  Aligned_cols=73  Identities=14%  Similarity=0.188  Sum_probs=46.5

Q ss_pred             CCCCeEEEEEcCCC------CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe---CCC------cEE
Q psy17902        141 HRASITCIAVTSDS------KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA---NNN------ELV  205 (454)
Q Consensus       141 h~~~V~~~~~s~~~------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~------~~l  205 (454)
                      -+..|.|+++.++.      ++++.|+.|+.++++.+.....+..+...    +-..++.++.+-   .++      -+|
T Consensus       581 l~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~ls~q----~l~~~~~s~~iv~~~~~~~~~~~~L~l  656 (1205)
T KOG1898|consen  581 LSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQ----GLSSPPESLCIVEMEATGGTDVAQLYL  656 (1205)
T ss_pred             eceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEcccc----ccCCCccceEEEEecccCCccceeEEE
Confidence            45678999998764      68999999999999998866555444321    222334444432   222      256


Q ss_pred             EEecCCCcEEEE
Q psy17902        206 ASGDNNSNIKLW  217 (454)
Q Consensus       206 ~~~~~dg~v~vw  217 (454)
                      .+|-.+|.+.-+
T Consensus       657 ~~GL~NGvllR~  668 (1205)
T KOG1898|consen  657 LIGLRNGVLLRF  668 (1205)
T ss_pred             EecccccEEEEE
Confidence            677777755433

>KOG4460|consensus

Probab=93.89  E-value=2.6  Score=39.63  Aligned_cols=96  Identities=9%  Similarity=0.102  Sum_probs=55.7

Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccC-CeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      -.|..+..++.|..++-.+.+|.+.++=.+. +....+......|.|-.++-+..|++.+..  +               
T Consensus       104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~--l---------------  166 (741)
T KOG4460|consen  104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTS--L---------------  166 (741)
T ss_pred             EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCc--e---------------
Confidence            3467788889998888888888665543221 222244444444555555544444433210  0               


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCC---CEEEEecCCCcEEEEEcCCCcee
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNS---DLVASGSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~  399 (454)
                                   .+..++|+|+.   ..|..-+.|..|++|++.....+
T Consensus       167 -------------tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  167 -------------TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             -------------eeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence                         05556777765   35666667778888887665444

>PLN02153 epithiospecifier protein

Probab=93.85  E-value=5.2  Score=36.70  Aligned_cols=142  Identities=15%  Similarity=0.122  Sum_probs=70.0

Q ss_pred             CCcEEEEecCC-----CcEEEEeCCCccEEeeccc-----C-CC-eEEEEEcCCCCEEEEEeCC-----------CcEEE
Q psy17902        201 NNELVASGDNN-----SNIKLWSSSLEHLHTFTGH-----K-AP-ITGLAISFECDTLYSSSND-----------RSIKV  257 (454)
Q Consensus       201 ~~~~l~~~~~d-----g~v~vw~~~~~~~~~~~~~-----~-~~-v~~~~~~~~~~~l~~~~~d-----------g~i~i  257 (454)
                      ++.+++.|+.+     ..+.+||+....=..+...     . .. -.+++. .++++++.|+.+           ..|.+
T Consensus        85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~v~~  163 (341)
T PLN02153         85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERFRTIEA  163 (341)
T ss_pred             CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCcccceEEE
Confidence            56677777753     3577888743222222110     1 11 112222 355667777653           24778


Q ss_pred             EeCCCceeEEEeeccC-----CceeEEEeecCCCEEEEeeCC-------------CcEEEeeccCCeEEEEccc-----c
Q psy17902        258 WNIEDRAYVETLFGHQ-----SAITSLDILAKNRVISSGGTD-------------KSVRVWKIQEESQLVFNGH-----S  314 (454)
Q Consensus       258 wd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~~~~~~~~~-----~  314 (454)
                      ||+.+.+-.. +....     ..-.+++. -++++++.++.+             ..+.+||+.+.+-......     .
T Consensus       164 yd~~~~~W~~-l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~  241 (341)
T PLN02153        164 YNIADGKWVQ-LPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSA  241 (341)
T ss_pred             EECCCCeEee-CCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCC
Confidence            8987765332 21110     01112222 245655555432             4588899887765533211     1


Q ss_pred             CCeEEEEecCCCEEEEEeCC--------------CCEEEEecCCC
Q psy17902        315 RGIDMTRRVNDQQFITCGED--------------GTLSLWSILKK  345 (454)
Q Consensus       315 ~~i~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~~  345 (454)
                      .....+....+..++.|+..              ..|..||+.+.
T Consensus       242 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~  286 (341)
T PLN02153        242 RSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL  286 (341)
T ss_pred             cceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence            12233344456677777742              25677777554

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.84  E-value=0.29  Score=28.62  Aligned_cols=31  Identities=10%  Similarity=0.135  Sum_probs=25.8

Q ss_pred             CCeEEEEEcCCC---CEEEEEeCCCeEEEEEcCC
Q psy17902        143 ASITCIAVTSDS---KHVYSACKDGIIIKWLLET  173 (454)
Q Consensus       143 ~~V~~~~~s~~~---~~l~~~~~dg~i~iwd~~~  173 (454)
                      +.|.+|.|||..   .+|+.+-..|.|.|+|+.+
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468999999854   5888887789999999984

It contains a characteristic DLL sequence motif.

>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118

Probab=93.83  E-value=4.3  Score=35.66  Aligned_cols=218  Identities=11%  Similarity=0.106  Sum_probs=125.5

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCC-----Ccc---EEeecc-----cCCCeEEEEEcCCCC------------EE
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSS-----LEH---LHTFTG-----HKAPITGLAISFECD------------TL  246 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-----~~~---~~~~~~-----~~~~v~~~~~~~~~~------------~l  246 (454)
                      ....|+++|.+.+-++....+...+||..     +..   +.++..     .....+.+.|+....            .+
T Consensus        24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F  103 (336)
T TIGR03118        24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF  103 (336)
T ss_pred             ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence            45679999999888888888999999984     211   223321     234677788874332            36


Q ss_pred             EEEeCCCcEEEEeCCCcee-----EEEee-ccCCce-eEEEeecC--CCEEEEe-eCCCcEEEeeccCCeEEE---Eccc
Q psy17902        247 YSSSNDRSIKVWNIEDRAY-----VETLF-GHQSAI-TSLDILAK--NRVISSG-GTDKSVRVWKIQEESQLV---FNGH  313 (454)
Q Consensus       247 ~~~~~dg~i~iwd~~~~~~-----~~~~~-~~~~~v-~~~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~---~~~~  313 (454)
                      +.++.||+|.-|...-...     ...+. ...+.| ..+++...  +++|+.+ -..++|.|||-.-.....   +...
T Consensus       104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP  183 (336)
T TIGR03118       104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP  183 (336)
T ss_pred             EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence            7788999999998532221     11221 112333 34555433  4555444 457889999865332211   1100


Q ss_pred             -----cCCeEEEEecCCCEE-------------EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-
Q psy17902        314 -----SRGIDMTRRVNDQQF-------------ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-  374 (454)
Q Consensus       314 -----~~~i~~~~~~~~~~l-------------~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-  374 (454)
                           ..+.. +....+..+             +.+..-|.|-+||+ .+..++++.....       -...+.|+..| 
T Consensus       184 ~iPagyAPFn-Iqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~-~G~l~~r~as~g~-------LNaPWG~a~APa  254 (336)
T TIGR03118       184 ALPAGYAPFN-VQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTL-NGQLLRRVASSGR-------LNAPWGLAIAPE  254 (336)
T ss_pred             CCCCCCCCcc-eEEECCeEEEEEEecCCcccccccCCCcceEEEEcC-CCcEEEEeccCCc-------ccCCceeeeChh
Confidence                 01111 111112222             23444578999997 4556665532221       22256666655 


Q ss_pred             -----CCCEEEEecCCCcEEEEEcCCCceeeEeccCCC----ceeeeEEEEcC
Q psy17902        375 -----NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL----SGVINSLVFTS  418 (454)
Q Consensus       375 -----~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~l~~s~  418 (454)
                           .+.+|+---.||+|..||..++..+..+.....    -..++.|.|-.
T Consensus       255 ~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn  307 (336)
T TIGR03118       255 SFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN  307 (336)
T ss_pred             hhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence                 456777767799999999999987777765321    12367788865

This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=93.76  E-value=6  Score=37.10  Aligned_cols=142  Identities=13%  Similarity=0.134  Sum_probs=85.5

Q ss_pred             CCcEEEEecCCCcEEEEeCCCcc-----EEeecccCCCeEEEEEcC----CCCEEEEEeCCCcEEEEeCCC--ce-----
Q psy17902        201 NNELVASGDNNSNIKLWSSSLEH-----LHTFTGHKAPITGLAISF----ECDTLYSSSNDRSIKVWNIED--RA-----  264 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~~~~~-----~~~~~~~~~~v~~~~~~~----~~~~l~~~~~dg~i~iwd~~~--~~-----  264 (454)
                      +...|++|+..|.++||+.....     +..-..-..+|..+..-.    .....++.-.-..+.||.+..  +.     
T Consensus        36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~  115 (418)
T PF14727_consen   36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN  115 (418)
T ss_pred             CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence            34589999999999999982211     222233457888776642    223334445667788888721  11     


Q ss_pred             --eEEEeeccCC--ceeEEEeecC-----CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCC
Q psy17902        265 --YVETLFGHQS--AITSLDILAK-----NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGED  334 (454)
Q Consensus       265 --~~~~~~~~~~--~v~~~~~~~~-----~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~d  334 (454)
                        .+..+..|.-  ....+++-|-     ..+|++-+.||.+.+|+-...... .+...--+-.....+..+.|++++.+
T Consensus       116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss  195 (418)
T PF14727_consen  116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASSS  195 (418)
T ss_pred             EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecCc
Confidence              2233334432  2333444332     367888999999999998765433 22222222234445567788899888


Q ss_pred             CCEEEEec
Q psy17902        335 GTLSLWSI  342 (454)
Q Consensus       335 g~i~iwd~  342 (454)
                      ..+..|..
T Consensus       196 ~~l~~Yky  203 (418)
T PF14727_consen  196 WTLECYKY  203 (418)
T ss_pred             eeEEEecH
Confidence            88888875

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=93.69  E-value=0.27  Score=28.78  Aligned_cols=30  Identities=17%  Similarity=0.158  Sum_probs=25.5

Q ss_pred             cEEEEEEecCC---CEEEEecCCCcEEEEEcCC
Q psy17902        366 WITSVACLHNS---DLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       366 ~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~  395 (454)
                      .+.++.|||..   .+|+.+-.-|.|.|+|+.+
T Consensus         2 AvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    2 AVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            38999999844   4888888889999999985

It contains a characteristic DLL sequence motif.

>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.65  E-value=3.4  Score=33.96  Aligned_cols=179  Identities=9%  Similarity=0.007  Sum_probs=92.2

Q ss_pred             CCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEeeCCCcEEEeeccCCeEEEEccccCCeE
Q psy17902        242 ECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGGTDKSVRVWKIQEESQLVFNGHSRGID  318 (454)
Q Consensus       242 ~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~  318 (454)
                      ++.++.+.+.  ...|++||+.+++.+.+..-....+..=-...-+..+ .-.-.+|.-.++|.++.+.+-.....+.-.
T Consensus        55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeGW  134 (262)
T COG3823          55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEGW  134 (262)
T ss_pred             CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcce
Confidence            4566666654  3469999999998775543221122111111112222 223468888899998877762111112112


Q ss_pred             EEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        319 MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       319 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      .+. .++..|+.+....+++.-|..+.....++........    -..++-+.|- +|.+.|-.-.+..|...+..+|+.
T Consensus       135 gLt-~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~p----v~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV  208 (262)
T COG3823         135 GLT-SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVP----VSKLNELEWV-DGELYANVWQTTRIARIDPDSGRV  208 (262)
T ss_pred             eee-cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCee----cccccceeee-ccEEEEeeeeecceEEEcCCCCcE
Confidence            222 2444466666666677767666555554443221100    0012333332 444444444444555555566655


Q ss_pred             eeEeccC----------CCceeeeEEEEcCCCCEEEEE
Q psy17902        399 LEFLQDI----------PLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       399 ~~~~~~~----------~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      +..+...          .+....+.+++.|++..++.+
T Consensus       209 ~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iT  246 (262)
T COG3823         209 VAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLIT  246 (262)
T ss_pred             EEEEEccCCchhcCccccccccccceeecCcCCeEEEe
Confidence            4443321          244568899999998655555

>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins

Probab=93.60  E-value=7.4  Score=37.61  Aligned_cols=179  Identities=13%  Similarity=-0.002  Sum_probs=0.0

Q ss_pred             CCCCEEEEE---eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec
Q psy17902        152 SDSKHVYSA---CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT  228 (454)
Q Consensus       152 ~~~~~l~~~---~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~  228 (454)
                      .++=++++.   ...+.+.+.|.. +.....+.........      +...++|.+++...  ..+..+|+.++.+..+.
T Consensus       113 ~~gl~~~~~~~~~~~~~~~~iD~~-G~Vrw~~~~~~~~~~~------~~~l~nG~ll~~~~--~~~~e~D~~G~v~~~~~  183 (477)
T PF05935_consen  113 EDGLYFVNGNDWDSSSYTYLIDNN-GDVRWYLPLDSGSDNS------FKQLPNGNLLIGSG--NRLYEIDLLGKVIWEYD  183 (477)
T ss_dssp             TT-EEEEEETT--BEEEEEEEETT-S-EEEEE-GGGT--SS------EEE-TTS-EEEEEB--TEEEEE-TT--EEEEEE
T ss_pred             CCcEEEEeCCCCCCCceEEEECCC-ccEEEEEccCccccce------eeEcCCCCEEEecC--CceEEEcCCCCEEEeee


Q ss_pred             ccCCC---eEEEEEcCCCCEEEEEe--------------CCCcEEEEeCCCceeEEEeeccCCc----------------
Q psy17902        229 GHKAP---ITGLAISFECDTLYSSS--------------NDRSIKVWNIEDRAYVETLFGHQSA----------------  275 (454)
Q Consensus       229 ~~~~~---v~~~~~~~~~~~l~~~~--------------~dg~i~iwd~~~~~~~~~~~~~~~~----------------  275 (454)
                      .-...   -..+...|+|++|+.+.              .|. |..+| .+|+.+..+..-.--                
T Consensus       184 l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~-Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~  261 (477)
T PF05935_consen  184 LPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDV-IVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDI  261 (477)
T ss_dssp             --TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-E-EEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSS
T ss_pred             cCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCE-EEEEC-CCCCEEEEEehHHhCCccccccccccccccc


Q ss_pred             -----------eeEEEeec-CCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEE-----------------------
Q psy17902        276 -----------ITSLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT-----------------------  320 (454)
Q Consensus       276 -----------v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~-----------------------  320 (454)
                                 ++++.+.+ ++.+|+++-.-..|...|.++++..-..+........                       
T Consensus       262 ~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~~w~~~~~~~ll~~vd~~G~~~~~~~~~~  341 (477)
T PF05935_consen  262 SGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPGGWNGTYQDYLLTPVDSNGNPIDCGDGDF  341 (477)
T ss_dssp             S-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-STT--TTTGGGB-EEB-TTS-B-EBSSSS-
T ss_pred             ccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCCCCCcccchheeeeeccCCceeeccCCCC


Q ss_pred             EecCCCEEEEEeCCC---CEEEEe
Q psy17902        321 RRVNDQQFITCGEDG---TLSLWS  341 (454)
Q Consensus       321 ~~~~~~~l~~~~~dg---~i~iwd  341 (454)
                      .+.-+++-+.-..+|   .|.+||
T Consensus       342 ~~~~gQH~~~~~~~g~~~~l~vFD  365 (477)
T PF05935_consen  342 DWFWGQHTAHLIPDGPQGNLLVFD  365 (477)
T ss_dssp             ---SS-EEEEE-TTS---SEEEEE
T ss_pred             cccccccceEEcCCCCeEEEEEEE

Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=93.26  E-value=0.51  Score=43.27  Aligned_cols=163  Identities=13%  Similarity=0.145  Sum_probs=96.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCC-CCCceE-EEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK-SYPPIL-ALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~-~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      -...|..+-..|+|+.|+.-+. ..+.++++.+...... .......+ ....|+ .+..-..|.-|.+++.||.|.-|=
T Consensus       219 ~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~r-kl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWF  296 (733)
T COG4590         219 PFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIR-KLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWF  296 (733)
T ss_pred             CccchHhhEECCCCCEEEEecC-CeEEEEeecccccchh-hhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeee
Confidence            4556888889999999888766 6889998876543322 11111111 001222 122223556688888899888774


Q ss_pred             -C--CCc----cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        219 -S--SLE----HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       219 -~--~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                       .  ++.    .++.++-...++..+.-..+.+-+++-+.+|++.++.....+.+..- .--..+.-++++|.+.++++-
T Consensus       297 dvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~-~~~~~~~~~~~Sp~~~~Ll~e  375 (733)
T COG4590         297 DVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE-RAYQAPQLVAMSPNQAYLLSE  375 (733)
T ss_pred             eeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh-hhhcCcceeeeCcccchheee
Confidence             3  222    12222222334443333334456778888898888875544443222 222355678999999998854


Q ss_pred             eCCCcEEEeeccCCeE
Q psy17902        292 GTDKSVRVWKIQEESQ  307 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~  307 (454)
                       ..|.++++.+.+..+
T Consensus       376 -~~gki~~~~l~Nr~P  390 (733)
T COG4590         376 -DQGKIRLAQLENRNP  390 (733)
T ss_pred             -cCCceEEEEecCCCC
Confidence             567899998876543

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.20  E-value=1.3  Score=37.61  Aligned_cols=68  Identities=7%  Similarity=0.133  Sum_probs=47.8

Q ss_pred             EeCCCcEEEEecCCCcEEEEeCC-CccEEe-------ec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17902        198 VANNNELVASGDNNSNIKLWSSS-LEHLHT-------FT-------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       198 ~~~~~~~l~~~~~dg~v~vw~~~-~~~~~~-------~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  262 (454)
                      +..++.+|++.+.+|.+++||+. .+.+..       +.       .....|..+.++.+|.-|++-+ +|..+.|+..-
T Consensus        18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L   96 (219)
T PF07569_consen   18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL   96 (219)
T ss_pred             EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence            45578899999999999999993 332211       11       3556788888888887666654 57889998775


Q ss_pred             ceeE
Q psy17902        263 RAYV  266 (454)
Q Consensus       263 ~~~~  266 (454)
                      +..+
T Consensus        97 ~~W~  100 (219)
T PF07569_consen   97 GCWI  100 (219)
T ss_pred             ceeE
Confidence            5443

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>KOG2377|consensus

Probab=93.15  E-value=7.3  Score=36.20  Aligned_cols=151  Identities=8%  Similarity=0.113  Sum_probs=84.9

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEeCCCce---eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---
Q psy17902        235 TGLAISFECDTLYSSSNDRSIKVWNIEDRA---YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---  308 (454)
Q Consensus       235 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---  308 (454)
                      +.+-|...++.|++. ..|.+.-|-+....   ++..-....++|.+|.|++|++.|++--.+..|.+++....+..   
T Consensus        26 ngvFfDDaNkqlfav-rSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~  104 (657)
T KOG2377|consen   26 NGVFFDDANKQLFAV-RSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEY  104 (657)
T ss_pred             cceeeccCcceEEEE-ecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHH
Confidence            344454334444433 34556666554321   22222345679999999999999999999999999998543332   


Q ss_pred             --EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec--
Q psy17902        309 --VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS--  383 (454)
Q Consensus       309 --~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--  383 (454)
                        ........|...+|.+..-++..+..| +-+|-...... ++...         .+...|.-..|.++.++++-++  
T Consensus       105 ~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~v~pekrslRlVk---------s~~~nvnWy~yc~et~v~LL~t~~  174 (657)
T KOG2377|consen  105 TQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQVLPEKRSLRLVK---------SHNLNVNWYMYCPETAVILLSTTV  174 (657)
T ss_pred             HHHhccCcceeEEEEEecCeeEEEEecCC-eEEEEEchhhhhhhhhh---------hcccCccEEEEccccceEeeeccc
Confidence              222333446666677666666666555 66665533221 11111         1223377788888887433332  


Q ss_pred             CCCcEEEEEcCCC
Q psy17902        384 YDGCVKLWKITPK  396 (454)
Q Consensus       384 ~dg~v~iwd~~~~  396 (454)
                      ..+++.=+.+.++
T Consensus       175 ~~n~lnpf~~~~~  187 (657)
T KOG2377|consen  175 LENVLNPFHFRAG  187 (657)
T ss_pred             cccccccEEEeec
Confidence            3444444444443

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=93.08  E-value=3.4  Score=36.39  Aligned_cols=114  Identities=15%  Similarity=0.254  Sum_probs=68.3

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------CCCcEEEEeCCCccEEeecc-----cCC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------NNSNIKLWSSSLEHLHTFTG-----HKA  232 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~v~vw~~~~~~~~~~~~-----~~~  232 (454)
                      ..|++||..+.+-...-.      +-.+.|++|.|..+.++++.|.      ....+..||+....-..+..     -.+
T Consensus        16 ~~lC~yd~~~~qW~~~g~------~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipg   89 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGN------GISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPG   89 (281)
T ss_pred             CEEEEEECCCCEeecCCC------CceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCC
Confidence            469999988654332221      3556899999997777777774      34578889986665555544     247


Q ss_pred             CeEEEEEcC-CCCEEE-EEe-C--CCcEEEEeCCCceeEEE-eeccCCceeEEEeec
Q psy17902        233 PITGLAISF-ECDTLY-SSS-N--DRSIKVWNIEDRAYVET-LFGHQSAITSLDILA  283 (454)
Q Consensus       233 ~v~~~~~~~-~~~~l~-~~~-~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~  283 (454)
                      +|..+.+.. ++..+. +|. .  +..|..||=.+...+.. .......|..+.+.|
T Consensus        90 pv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~  146 (281)
T PF12768_consen   90 PVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLP  146 (281)
T ss_pred             cEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEe
Confidence            888888743 343344 433 2  33466676554444433 222344566665543

>KOG3616|consensus

Probab=92.88  E-value=4.1  Score=40.17  Aligned_cols=71  Identities=13%  Similarity=0.172  Sum_probs=47.2

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      ....++++.-+|.++-++.+..||+|.+|+........+-....+-..+.|...|  |+++++|..+.-|.-+
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnhg--l~~~tsdrr~la~~~d   83 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNHG--LVTATSDRRALAWKED   83 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeeccc--eEEEeccchhheeecc
Confidence            3346778888999999999999999999998322222222222344455565444  7777777877777643

>KOG1900|consensus

Probab=92.75  E-value=1.8  Score=45.44  Aligned_cols=150  Identities=11%  Similarity=0.176  Sum_probs=87.5

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE--------eCCCcEEEEecCCCcEEE
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV--------ANNNELVASGDNNSNIKL  216 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~l~~~~~dg~v~v  216 (454)
                      =..|-+-|.=++... +-|..+.+|+.+++.....+.      +....|..+..        .|.=+++++...--.|.+
T Consensus        81 ~~~mGiFpeI~RaWi-TiDn~L~lWny~~~~e~~~~d------~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~i  153 (1311)
T KOG1900|consen   81 KTDMGIFPEIGRAWI-TIDNNLFLWNYESDNELAEYD------GLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVI  153 (1311)
T ss_pred             eeeeccchhhcceEE-EeCCeEEEEEcCCCCcccccc------chhhhheeeeeecCCCCcchhhhheeEEecccceEEE
Confidence            344455555333333 347899999999866555443      23335555543        222233333333455666


Q ss_pred             EeCC----CccE------EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC----CCc---e-e-------------
Q psy17902        217 WSSS----LEHL------HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI----EDR---A-Y-------------  265 (454)
Q Consensus       217 w~~~----~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~----~~~---~-~-------------  265 (454)
                      +-+.    ....      .++......|+|+....+|+.+++| .||.  +|.+    ..+   + +             
T Consensus       154 lgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G-~dg~--lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~l  230 (1311)
T KOG1900|consen  154 LGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAG-RDGN--LYELVYQAEDGWFGSRCRKICLTKSVLSSL  230 (1311)
T ss_pred             EEEEeccccCcccccccceeeecCCceEEEEEeccCCcEEEee-cCCC--EEEEEEeccCchhhcccccccCchhHHHHh
Confidence            6541    1111      1222335678888877777766665 5564  4433    111   0 0             


Q ss_pred             ---EEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902        266 ---VETLF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       266 ---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~  304 (454)
                         +..+. .+..+|..|.+...-+++.+-+..|+|.+|++..
T Consensus       231 vPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  231 VPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             hhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence               11222 4677999999988888999999999999999976

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=92.72  E-value=8.6  Score=35.96  Aligned_cols=148  Identities=13%  Similarity=0.032  Sum_probs=80.5

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe-----EE
Q psy17902        234 ITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES-----QL  308 (454)
Q Consensus       234 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-----~~  308 (454)
                      ...+..++++.+++.+.....++-||-....-...-......++++.+.+++.+++++ ..|.+.. ....+.     ..
T Consensus       241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f  318 (398)
T PLN00033        241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDF  318 (398)
T ss_pred             eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccce
Confidence            4455667777766666543333334432211111122345668899999898887765 5666543 333332     11


Q ss_pred             -EEc--cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        309 -VFN--GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       309 -~~~--~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                       ...  .....+..+.+.+++.+++++..|.+.... ..++.-........      -...+..+.|.++++.+++| .+
T Consensus       319 ~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s~-D~G~tW~~~~~~~~------~~~~ly~v~f~~~~~g~~~G-~~  390 (398)
T PLN00033        319 EEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRST-DGGKSWKRDKGADN------IAANLYSVKFFDDKKGFVLG-ND  390 (398)
T ss_pred             eecccCCCCcceEEEEEcCCCcEEEEECCCcEEEeC-CCCcceeEccccCC------CCcceeEEEEcCCCceEEEe-CC
Confidence             111  122346666677777888888889777653 33333333221111      12237889998877666655 46


Q ss_pred             CcEEEE
Q psy17902        386 GCVKLW  391 (454)
Q Consensus       386 g~v~iw  391 (454)
                      |.|.-|
T Consensus       391 G~il~~  396 (398)
T PLN00033        391 GVLLRY  396 (398)
T ss_pred             cEEEEe
Confidence            665544

>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2

Probab=92.69  E-value=7.3  Score=35.01  Aligned_cols=229  Identities=11%  Similarity=0.037  Sum_probs=111.2

Q ss_pred             CCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeC-CCcc------
Q psy17902        154 SKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSS-SLEH------  223 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~-~~~~------  223 (454)
                      +++|+.|+.+|...+. +...  .....        .+...|+++...+.-+.|++-+ ....++++++ ....      
T Consensus        13 ~~~lL~GTe~Gly~~~-~~~~~~~~~kl--------~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~   83 (302)
T smart00036       13 GKWLLVGTEEGLYVLN-ISDQPGTLEKL--------IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALG   83 (302)
T ss_pred             CcEEEEEeCCceEEEE-cccCCCCeEEe--------cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccC
Confidence            3689999999966555 5432  22221        2455899999998877666655 3345999998 1110      


Q ss_pred             ---------EEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCc--e--eEEEe---e-ccCCceeEEEeecC-
Q psy17902        224 ---------LHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDR--A--YVETL---F-GHQSAITSLDILAK-  284 (454)
Q Consensus       224 ---------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~--~--~~~~~---~-~~~~~v~~~~~~~~-  284 (454)
                               ......|.....-++.... ...++++....+|.++.....  +  ....+   . ....++..+..+++ 
T Consensus        84 ~~~~~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~  163 (302)
T smart00036       84 SARLVIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSF  163 (302)
T ss_pred             CccccccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccc
Confidence                     0112233333333333321 223444555566777644322  1  11110   0 11223333333333 


Q ss_pred             -CCEEEEeeCCCcEEEeeccC--CeEE----E--Ecccc-CCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecc
Q psy17902        285 -NRVISSGGTDKSVRVWKIQE--ESQL----V--FNGHS-RGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       285 -~~~l~~~~~dg~i~i~d~~~--~~~~----~--~~~~~-~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                       ...++.|+..+...++++..  ....    .  ..... .++.+....++ .++.+-.+. ..+.|.............
T Consensus       164 ~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~~~-e~Llc~~~~-~v~Vn~~G~~~~r~~~l~  241 (302)
T smart00036      164 ERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVPRD-EFLLCYDEF-GVFVNLYGKRRSRNPILH  241 (302)
T ss_pred             cceEEEEEEcCCCCeEEEEeecccccccccccccccccccCceEEEEECCC-eEEEEECcE-EEEEeCCCCccccceEEE
Confidence             45677776653345555533  1100    0  11111 34444444444 444444333 334444321111111111


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      -        ...+.++++..  .+|++-+.+ .|.++++.++..++.+..
T Consensus       242 w--------~~~p~~~~~~~--pyll~~~~~-~ievr~l~~~~l~q~i~~  280 (302)
T smart00036      242 W--------EFMPESFAYHS--PYLLAFHDN-GIEIRSIKTGELLQELAD  280 (302)
T ss_pred             c--------CCcccEEEEEC--CEEEEEcCC-cEEEEECCCCceEEEEec
Confidence            0        11256677763  567666655 499999999988877763

Unpublished observations.

>PLN02153 epithiospecifier protein

Probab=92.62  E-value=8.2  Score=35.42  Aligned_cols=104  Identities=12%  Similarity=0.175  Sum_probs=52.6

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCceeEE--Eeec---cCCc-eeEEEeecCCCEEEEeeCC-----------CcEEE
Q psy17902        242 ECDTLYSSSND-----RSIKVWNIEDRAYVE--TLFG---HQSA-ITSLDILAKNRVISSGGTD-----------KSVRV  299 (454)
Q Consensus       242 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~---~~~~-v~~~~~~~~~~~l~~~~~d-----------g~i~i  299 (454)
                      ++.+++.|+.+     ..+.+||+.+.+...  .+..   .... -.+++. -++++++.|+.+           ..|.+
T Consensus        85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~v~~  163 (341)
T PLN02153         85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMAS-DENHVYVFGGVSKGGLMKTPERFRTIEA  163 (341)
T ss_pred             CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEE-ECCEEEEECCccCCCccCCCcccceEEE
Confidence            45666777653     357889987754322  1100   1111 112222 345666777653           24778


Q ss_pred             eeccCCeEEEEccc-----cCCeEEEEecCCCEEEEEeCC-------------CCEEEEecCCCc
Q psy17902        300 WKIQEESQLVFNGH-----SRGIDMTRRVNDQQFITCGED-------------GTLSLWSILKKV  346 (454)
Q Consensus       300 ~d~~~~~~~~~~~~-----~~~i~~~~~~~~~~l~~~~~d-------------g~i~iwd~~~~~  346 (454)
                      ||..+..-..+...     ...-..+....+..++.++.+             ..|.+||+.+.+
T Consensus       164 yd~~~~~W~~l~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~  228 (341)
T PLN02153        164 YNIADGKWVQLPDPGENFEKRGGAGFAVVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGK  228 (341)
T ss_pred             EECCCCeEeeCCCCCCCCCCCCcceEEEECCeEEEEeccccccccCCccceecCceEEEEcCCCc
Confidence            88887655433221     111122333455555555432             457888876653

>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family

Probab=92.52  E-value=9.9  Score=36.14  Aligned_cols=62  Identities=13%  Similarity=-0.002  Sum_probs=39.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccC-CCCCCceEEEEEeCCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD-RKSYPPILALAVANNN  202 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~  202 (454)
                      .-.....|+|.|++++|++--..|.|++++..+........+.... .........|+++|+-
T Consensus        28 GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF   90 (454)
T TIGR03606        28 GLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF   90 (454)
T ss_pred             CCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence            4455799999999987777655699999986554322111111110 1135678999999874

PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.

>PLN02193 nitrile-specifier protein

Probab=92.50  E-value=11  Score=36.48  Aligned_cols=149  Identities=10%  Similarity=0.083  Sum_probs=74.2

Q ss_pred             CCCEEEEEeCC-----CcEEEEeCCCceeEEEeec----cCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCCeE
Q psy17902        242 ECDTLYSSSND-----RSIKVWNIEDRAYVETLFG----HQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEESQ  307 (454)
Q Consensus       242 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~  307 (454)
                      ++.+++.|+.+     ..+.+||+.+.+....-..    ....-.+++. -++++++.|+.++     .+..||+.+..-
T Consensus       228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W  306 (470)
T PLN02193        228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW  306 (470)
T ss_pred             CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE
Confidence            45666677654     3588899887654321110    1111112222 2456667776543     467788877654


Q ss_pred             EEEccc-----cCCeEEEEecCCCEEEEEeCC----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        308 LVFNGH-----SRGIDMTRRVNDQQFITCGED----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       308 ~~~~~~-----~~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                      ......     ...-..+....+..++.++.+    ..+.+||+.+..-......  +..   +.+....+++ .-++++
T Consensus       307 ~~~~~~~~~~~~R~~~~~~~~~gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~--g~~---P~~R~~~~~~-~~~~~i  380 (470)
T PLN02193        307 FHCSTPGDSFSIRGGAGLEVVQGKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETF--GVR---PSERSVFASA-AVGKHI  380 (470)
T ss_pred             EeCCCCCCCCCCCCCcEEEEECCcEEEEECCCCCccCceEEEECCCCEEEEeccC--CCC---CCCcceeEEE-EECCEE
Confidence            432211     111122333456667777655    4588899876543221111  000   0011122222 235667


Q ss_pred             EEEecCC--------------CcEEEEEcCCCc
Q psy17902        379 VASGSYD--------------GCVKLWKITPKR  397 (454)
Q Consensus       379 l~~~~~d--------------g~v~iwd~~~~~  397 (454)
                      ++.|+..              ..+.+||+.+..
T Consensus       381 yv~GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~  413 (470)
T PLN02193        381 VIFGGEIAMDPLAHVGPGQLTDGTFALDTETLQ  413 (470)
T ss_pred             EEECCccCCccccccCccceeccEEEEEcCcCE
Confidence            7777753              247888887663

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=92.46  E-value=9.1  Score=35.59  Aligned_cols=200  Identities=12%  Similarity=0.085  Sum_probs=103.8

Q ss_pred             CCcEEEEecCCCcEEEEeC-CCccEEeeccc--CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC-Cce
Q psy17902        201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGH--KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ-SAI  276 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v  276 (454)
                      +++ ++++..+|.|.-.|. ++..+.....-  ...+.+-.+..+|+ |+.++.+|.++.+|..+++.+....... ..+
T Consensus        68 dg~-v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~  145 (370)
T COG1520          68 DGT-VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSPYY  145 (370)
T ss_pred             CCe-EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCeEE
Confidence            443 555567787777777 33334332221  12222222222554 8888899999999998898887776554 111


Q ss_pred             eEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccc---cCCeEEEEecCCCEEEEEeC--CCCEEEEecCCCcccee
Q psy17902        277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGH---SRGIDMTRRVNDQQFITCGE--DGTLSLWSILKKVPTHT  350 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~---~~~i~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~  350 (454)
                      ..-....++ .++.++.++.+...+..++... .....   ...+..........++.+..  ++.+.-.|..++.....
T Consensus       146 ~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~  224 (370)
T COG1520         146 ASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTLKWS  224 (370)
T ss_pred             ecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcEeee
Confidence            111222233 3444446788888888877775 21111   11111111123445555555  66677778878877776


Q ss_pred             eecccCCCCCCCC-CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        351 IPVAHGYDSSSSE-PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       351 ~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      ............. ...+..-...-++ -++.++.+|.+...+..+++.+-....
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~~~~~~~g~~~~l~~~~G~~~W~~~~  278 (370)
T COG1520         225 QKVSQTIGRTAISTTPAVDGGPVYVDG-GVYAGSYGGKLLCLDADTGELIWSFPA  278 (370)
T ss_pred             eeeecccCcccccccccccCceEEECC-cEEEEecCCeEEEEEcCCCceEEEEec
Confidence            5433322111000 0001110111122 235666777788888888876655543

>KOG1898|consensus

Probab=92.43  E-value=9.5  Score=39.40  Aligned_cols=127  Identities=13%  Similarity=0.181  Sum_probs=77.5

Q ss_pred             CCcEEEEeC--CCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecC
Q psy17902        211 NSNIKLWSS--SLEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAK  284 (454)
Q Consensus       211 dg~v~vw~~--~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~  284 (454)
                      +|.++.|++  .++.+.-+..  -.++|  .+.+|...++++| ....+++||+...+.++...  .....|+.+.+.  
T Consensus       911 ~g~~ytyk~~~~g~~lellh~T~~~~~v--~Ai~~f~~~~Lag-vG~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~--  985 (1205)
T KOG1898|consen  911 SGFVYTYKFVRNGDKLELLHKTEIPGPV--GAICPFQGRVLAG-VGRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY--  985 (1205)
T ss_pred             CCceEEEEEEecCceeeeeeccCCCccc--eEEeccCCEEEEe-cccEEEEeeCChHHHHhhhhhccCceEEEEEeec--
Confidence            466778877  4554333322  22334  4555666666665 45789999998877655432  235567777763  


Q ss_pred             CCEEEEeeCCCcEEEe--eccCCeEEEEccc--cCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902        285 NRVISSGGTDKSVRVW--KIQEESQLVFNGH--SRGIDMTRRVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~dg~i~iwd~  342 (454)
                      +..+++|...-.|.++  +-..++.+.+...  +.-++++...+.+.++.+..=|.+.+..+
T Consensus       986 ~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~lD~~tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen  986 GARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELLDYDTVAGADRFGNIAVVRI 1047 (1205)
T ss_pred             ceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEecCCceeeccccCcEEEEEC
Confidence            6677777665555544  4444455544433  33466777777788888777777776655

>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes

Probab=92.42  E-value=6.5  Score=33.78  Aligned_cols=150  Identities=13%  Similarity=0.175  Sum_probs=79.3

Q ss_pred             EEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC---CcEEEeeccC----CeEEEE----ccccCCeEEEEec
Q psy17902        255 IKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD---KSVRVWKIQE----ESQLVF----NGHSRGIDMTRRV  323 (454)
Q Consensus       255 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~----~~~~~~----~~~~~~i~~~~~~  323 (454)
                      -.+||+.+++....-........+-.+.++|++|.+|+..   ..+++++...    ......    ....---+....+
T Consensus        48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~  127 (243)
T PF07250_consen   48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP  127 (243)
T ss_pred             EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence            4589998876532222223333445567899999988752   3577777544    111111    1111112445556


Q ss_pred             CCCEEEEEeCCC-CEEEEecCCC-ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        324 NDQQFITCGEDG-TLSLWSILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       324 ~~~~l~~~~~dg-~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      ++..|+.|+... +..+|.-... .....+........ ......---+...|+|++|+.+..+  -.|||..++..+..
T Consensus       128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~-~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~~  204 (243)
T PF07250_consen  128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSD-TLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVRT  204 (243)
T ss_pred             CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhc-cCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEee
Confidence            788888888663 3444443221 11111111110000 0112223456678999999888765  55678888777677


Q ss_pred             eccCCC
Q psy17902        402 LQDIPL  407 (454)
Q Consensus       402 ~~~~~~  407 (454)
                      +..++.
T Consensus       205 lP~lPg  210 (243)
T PF07250_consen  205 LPDLPG  210 (243)
T ss_pred             CCCCCC
Confidence            666543

Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].

>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]

Probab=92.40  E-value=11  Score=36.26  Aligned_cols=272  Identities=12%  Similarity=0.037  Sum_probs=0.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      .+|.++.+..+| .|.+|+.|| +..||..+++.......     ....+|..+..+-.+. |.+|+.+| |.+.+. ..
T Consensus       165 ~~V~aLv~D~~g-~lWvgT~dG-L~~fd~~~gkalql~s~-----~~dk~I~al~~d~qg~-LWVGTdqG-v~~~e~~G~  235 (671)
T COG3292         165 TPVVALVFDANG-RLWVGTPDG-LSYFDAGRGKALQLASP-----PLDKAINALIADVQGR-LWVGTDQG-VYLQEAEGW  235 (671)
T ss_pred             ccceeeeeeccC-cEEEecCCc-ceEEccccceEEEcCCC-----cchhhHHHHHHHhcCc-EEEEeccc-eEEEchhhc


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEe
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVW  300 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~  300 (454)
                      ...............+........+..|+.+|-.+.--.+.+-.....+.|...-+.-.+.-|. .-|-+++.+|.+++-
T Consensus       236 ~~sn~~~~lp~~~I~ll~qD~qG~lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGsLWv~t~~giv~~~  315 (671)
T COG3292         236 RASNWGPMLPSGNILLLVQDAQGELWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGSLWVGTYGGIVRYL  315 (671)
T ss_pred             cccccCCCCcchheeeeecccCCCEEEeecccceeEecCCCCccccccccCCccccccceeeccCCCEeeeccCceEEEe


Q ss_pred             eccCCeEEEEccccCCeEEEEec----CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        301 KIQEESQLVFNGHSRGIDMTRRV----NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       301 d~~~~~~~~~~~~~~~i~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      +..-.....+....+.+......    .+..+.....-|.+.+-+-.++..+.......+..        |+.+++...|
T Consensus       316 ~a~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~Rg~n--------it~~~~d~~g  387 (671)
T COG3292         316 TADWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLRGMN--------ITTTLEDSRG  387 (671)
T ss_pred             cchhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeeccccc--------cchhhhccCC


Q ss_pred             CEEEEecCCCcEEEEEcCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        377 DLVASGSYDGCVKLWKITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      .+-+....+| +..|+..+ +..+...... ..+.|..+.=.|+++ |..+ ..+|.+.+
T Consensus       388 ~lWlgs~q~G-Lsrl~n~n~~avlde~agl-~ss~V~aived~dns-LWIG-Ts~Glvk~  443 (671)
T COG3292         388 RLWLGSMQNG-LSRLDNKNEWAVLDEDAGL-PSSEVSAIVEDPDNS-LWIG-TSGGLVKR  443 (671)
T ss_pred             cEEEEecccc-hhhhccCCcccccccccCC-cccceeeeeecCCCC-EEEe-ccCCeEec

>KOG1900|consensus

Probab=92.37  E-value=2  Score=44.99  Aligned_cols=177  Identities=15%  Similarity=0.195  Sum_probs=98.2

Q ss_pred             EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEee-c-------CCC
Q psy17902        215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL-A-------KNR  286 (454)
Q Consensus       215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-~-------~~~  286 (454)
                      .+|.+....+..+. |...-+.+-+-|.=++.. .+.|+.+.+|+.+++.....+.+-...|..+..- |       .=+
T Consensus        63 ~v~~IP~el~eq~~-~~~~~~~mGiFpeI~RaW-iTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~Iq  140 (1311)
T KOG1900|consen   63 QVVNIPDELLEQFS-NIECKTDMGIFPEIGRAW-ITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQ  140 (1311)
T ss_pred             ccccCCHHHHHHhc-CcceeeeeccchhhcceE-EEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhh
Confidence            34555544444444 333333444444333322 2457889999999977777776666666665542 2       223


Q ss_pred             EEEEeeCCCcEEEeeccC----CeEEEEc------cccCCeEEEEecCCCEEEEEeCCCCEEEEecC----CC---ccce
Q psy17902        287 VISSGGTDKSVRVWKIQE----ESQLVFN------GHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL----KK---VPTH  349 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~----~~~~~~~------~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~----~~---~~~~  349 (454)
                      +++....--.|.++-+.-    +....+.      .....+.++...+++.++.+|.||  .+|.+.    .+   +..+
T Consensus       141 hlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg--~lyEl~Yq~~~gWf~~rc~  218 (1311)
T KOG1900|consen  141 HLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISVDGVSVNCITYTENGRIFFAGRDG--NLYELVYQAEDGWFGSRCR  218 (1311)
T ss_pred             eeEEecccceEEEEEEEeccccCcccccccceeeecCCceEEEEEeccCCcEEEeecCC--CEEEEEEeccCchhhcccc
Confidence            333333444566654432    2222222      224456777766666677777777  445441    11   0000


Q ss_pred             eee---------cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        350 TIP---------VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       350 ~~~---------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      .+.         .+.-......+..+|..++......++.+-+..|+|.+|++..
T Consensus       219 Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  219 KICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             cccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence            000         0000000013466799999999889999999999999999976

>COG1520 FOG: WD40-like repeat [Function unknown]

Probab=91.87  E-value=11  Score=35.12  Aligned_cols=193  Identities=11%  Similarity=0.071  Sum_probs=108.1

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC-C
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK-A  232 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~-~  232 (454)
                      ..++++..+|.|.-.|..++..+.......    ....+.+-.+..+|+ |+.++.+|.+..+|. ++..+....... -
T Consensus        69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~~----~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~  143 (370)
T COG1520          69 GTVYVGTRDGNIFALNPDTGLVKWSYPLLG----AVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGGSP  143 (370)
T ss_pred             CeEEEecCCCcEEEEeCCCCcEEecccCcC----cceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCCCe
Confidence            355556788888888888888665443321    011122222223665 778888898999998 788888776655 1


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC---CceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeE
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ---SAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQ  307 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~  307 (454)
                      .+..-..-.+ ..++.++.++.+...|..++..........   ..+..-... ....++.+..  ++.+.-.|..++..
T Consensus       144 ~~~~~~v~~~-~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~-~~~~vy~~~~~~~~~~~a~~~~~G~~  221 (370)
T COG1520         144 YYASPPVVGD-GTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAI-ASGTVYVGSDGYDGILYALNAEDGTL  221 (370)
T ss_pred             EEecCcEEcC-cEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCcee-ecceEEEecCCCcceEEEEEccCCcE
Confidence            1111111222 344444477889999988888766543221   111111111 2234444544  55677777777666


Q ss_pred             EEEc-----cccCCe-EEEEe-----cCCCEEEEEeCCCCEEEEecCCCccceeeecc
Q psy17902        308 LVFN-----GHSRGI-DMTRR-----VNDQQFITCGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       308 ~~~~-----~~~~~i-~~~~~-----~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                      .-..     .....+ .....     .-+..+..++.++.+...+..+++.+..++..
T Consensus       222 ~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~  279 (370)
T COG1520         222 KWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPAG  279 (370)
T ss_pred             eeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence            5111     111101 00011     11333467778888999999999998888763

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=91.60  E-value=10  Score=34.41  Aligned_cols=132  Identities=11%  Similarity=0.113  Sum_probs=64.0

Q ss_pred             CCcEEEEecCC-----CcEEEEeCCCccE----EeecccCCCe--EEEEEcCCCCEEEEEeC-----CCcEEEEeCCCce
Q psy17902        201 NNELVASGDNN-----SNIKLWSSSLEHL----HTFTGHKAPI--TGLAISFECDTLYSSSN-----DRSIKVWNIEDRA  264 (454)
Q Consensus       201 ~~~~l~~~~~d-----g~v~vw~~~~~~~----~~~~~~~~~v--~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~  264 (454)
                      ++.+++.|+.+     ..+..+|+....-    ..+..-..+.  .+++. -++.+++.|+.     ...+..||+.+.+
T Consensus        72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~  150 (323)
T TIGR03548        72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE  150 (323)
T ss_pred             CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence            55677777654     3566667632221    2221111111  12222 24666666664     2368888987665


Q ss_pred             eEEE--eeccCCceeEEEeecCCCEEEEeeCCC----cEEEeeccCCeEEEEccc-----cC---CeEEEEecCCCEEEE
Q psy17902        265 YVET--LFGHQSAITSLDILAKNRVISSGGTDK----SVRVWKIQEESQLVFNGH-----SR---GIDMTRRVNDQQFIT  330 (454)
Q Consensus       265 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~-----~~---~i~~~~~~~~~~l~~  330 (454)
                      ....  +.. .......+...++++.+.|+.++    .+.+||..+.+-......     ..   ....+...++..++.
T Consensus       151 W~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~  229 (323)
T TIGR03548       151 WFELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLCI  229 (323)
T ss_pred             eeECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEEE
Confidence            3221  111 11112222233567777777654    356888887665433221     11   112223335667777


Q ss_pred             EeCC
Q psy17902        331 CGED  334 (454)
Q Consensus       331 ~~~d  334 (454)
                      |+.+
T Consensus       230 GG~~  233 (323)
T TIGR03548       230 GGFN  233 (323)
T ss_pred             CCcC
Confidence            7765

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4

Probab=91.43  E-value=2  Score=30.16  Aligned_cols=53  Identities=17%  Similarity=0.186  Sum_probs=34.4

Q ss_pred             ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        382 GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       382 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +..+|.+.-||..+++.-..+..   -...+.+++++|+.+|+++=..-.+|..++
T Consensus        33 ~~~~GRll~ydp~t~~~~vl~~~---L~fpNGVals~d~~~vlv~Et~~~Ri~ryw   85 (89)
T PF03088_consen   33 GRPTGRLLRYDPSTKETTVLLDG---LYFPNGVALSPDESFVLVAETGRYRILRYW   85 (89)
T ss_dssp             T---EEEEEEETTTTEEEEEEEE---ESSEEEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred             CCCCcCEEEEECCCCeEEEehhC---CCccCeEEEcCCCCEEEEEeccCceEEEEE
Confidence            45568899999988765444443   335778999999999988855555554444

3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.

>KOG3522|consensus

Probab=91.35  E-value=6.5  Score=39.41  Aligned_cols=135  Identities=13%  Similarity=0.080  Sum_probs=81.8

Q ss_pred             EEEEecCCCcEEEEeCC-C-ccEE---eecccCCCeEEEEEcCCCCEEEEEeCCCcEEE--------EeCCCceeEEEee
Q psy17902        204 LVASGDNNSNIKLWSSS-L-EHLH---TFTGHKAPITGLAISFECDTLYSSSNDRSIKV--------WNIEDRAYVETLF  270 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~-~-~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i--------wd~~~~~~~~~~~  270 (454)
                      .+..|+.++.+.++.-. + ....   .+......+.++.+++.  .+..|.-||++-.        ||..   .-..+.
T Consensus       549 Tic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~--Slgagl~dgt~a~y~rap~gSwd~e---p~~~~~  623 (925)
T KOG3522|consen  549 TICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG--SLGAGLIDGTLAVYGRAPSGSWDGE---PNISIP  623 (925)
T ss_pred             cccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc--ccccCccCCccccccCCCCCCCCCC---Cccccc
Confidence            57788889999998863 2 1111   11223345666666543  3555555565544        4443   122223


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      ....+|.+.++..+   ++.++.+|.|.++...+....    ....+...|+++...+.+.+++-.....+++++..+..
T Consensus       624 ~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~~~leahqee~~~Vthm~~~~~gVwvafasG~~~rlfhtetl~  700 (925)
T KOG3522|consen  624 TGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRSWDLEAHQEEAHSVTHMLYLDNGVWVAFASGDEERLFHTETLW  700 (925)
T ss_pred             cCCccccchhhhhc---eeeeecCCceEEEechhccccchhHHHHhhcceEEEEEeeCCceEEEEcCCCEEEEecccccC
Confidence            34567888877533   445778999999998765443    34455667888888887777776666667776554433

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=91.22  E-value=11  Score=34.20  Aligned_cols=152  Identities=9%  Similarity=0.109  Sum_probs=84.1

Q ss_pred             CceeEEEeecCCCEEEEeeCCCc------EEEeeccCC----eEE------EEcccc-C-------CeEEEEec-CCCEE
Q psy17902        274 SAITSLDILAKNRVISSGGTDKS------VRVWKIQEE----SQL------VFNGHS-R-------GIDMTRRV-NDQQF  328 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~------i~i~d~~~~----~~~------~~~~~~-~-------~i~~~~~~-~~~~l  328 (454)
                      +.+..|.+.+++..+++.+.+|.      ++.+++...    ..+      .+.... .       ....+..+ ++.++
T Consensus        20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~   99 (326)
T PF13449_consen   20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW   99 (326)
T ss_pred             CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence            55678888866666666777777      665555431    111      111111 1       12233343 44444


Q ss_pred             EEEeCC------CCEEEEecCCCccceeeecccCCC------CCCCCCCcEEEEEEecCCCEEEEecC-----CC-----
Q psy17902        329 ITCGED------GTLSLWSILKKVPTHTIPVAHGYD------SSSSEPNWITSVACLHNSDLVASGSY-----DG-----  386 (454)
Q Consensus       329 ~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~i~~~~~s~~~~~l~~~~~-----dg-----  386 (454)
                      ++.-.+      ..|..++.. +.....+.......      .....+...-+|+++|+|+.|+++..     |+     
T Consensus       100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~  178 (326)
T PF13449_consen  100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP  178 (326)
T ss_pred             EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence            444455      678888876 66666664433321      12235566899999999996555432     22     


Q ss_pred             ----cEEEEEcC--C-CceeeEec-cCC------CceeeeEEEEcCCCCEEEEE
Q psy17902        387 ----CVKLWKIT--P-KRTLEFLQ-DIP------LSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       387 ----~v~iwd~~--~-~~~~~~~~-~~~------~~~~v~~l~~s~d~~~l~~~  426 (454)
                          .++++.+.  + +.....+. ...      ....|+.+.+-+++++|+.=
T Consensus       179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLE  232 (326)
T PF13449_consen  179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLE  232 (326)
T ss_pred             ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEE
Confidence                15555544  3 21222211 111      34668899999999987764

>TIGR03032 conserved hypothetical protein TIGR03032

Probab=91.16  E-value=10  Score=33.60  Aligned_cols=90  Identities=10%  Similarity=0.074  Sum_probs=63.8

Q ss_pred             EecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---------------
Q psy17902        321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---------------  385 (454)
Q Consensus       321 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------------  385 (454)
                      .|.++...++-+..|.|..+|..++.........          +....++|.  |+++++|-+.               
T Consensus       209 RWhdgrLwvldsgtGev~~vD~~~G~~e~Va~vp----------G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~  276 (335)
T TIGR03032       209 RWYQGKLWLLNSGRGELGYVDPQAGKFQPVAFLP----------GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEER  276 (335)
T ss_pred             cEeCCeEEEEECCCCEEEEEcCCCCcEEEEEECC----------CCCccccee--CCEEEEEeccccCCCCcCCCchhhh
Confidence            3557788888889999999998877555444332          226778886  7777665431               


Q ss_pred             -----CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902        386 -----GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       386 -----g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                           .-|.+.|+.+|..+..+.....-..+.++++-|.-+.
T Consensus       277 l~~~~CGv~vidl~tG~vv~~l~feg~v~EifdV~vLPg~r~  318 (335)
T TIGR03032       277 LDALGCGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPGVRR  318 (335)
T ss_pred             hhhhcccEEEEECCCCCEEEEEEeCCceeEEEEEEEecCCCC
Confidence                 2377889999988888876555667888898887554

This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.

>PF12768 Rax2: Cortical protein marker for cell polarity

Probab=90.97  E-value=7.6  Score=34.27  Aligned_cols=93  Identities=8%  Similarity=0.185  Sum_probs=59.9

Q ss_pred             CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee------CCCcEEEeeccCCeEEEEccc-----cCCeEEEE
Q psy17902        253 RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG------TDKSVRVWKIQEESQLVFNGH-----SRGIDMTR  321 (454)
Q Consensus       253 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~-----~~~i~~~~  321 (454)
                      ..|++||..+.+....-.+-.+.|++|.|..+..+++.|.      ....+..||+.+.....+...     .+++..+.
T Consensus        16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~   95 (281)
T PF12768_consen   16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT   95 (281)
T ss_pred             CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE
Confidence            4599999987766554455678899999986667777664      355788999988776544442     35666555


Q ss_pred             ec--CC-CEEEEEe-C--CCCEEEEecCCC
Q psy17902        322 RV--ND-QQFITCG-E--DGTLSLWSILKK  345 (454)
Q Consensus       322 ~~--~~-~~l~~~~-~--dg~i~iwd~~~~  345 (454)
                      +.  +. +.+++|. .  +..|..||=...
T Consensus        96 ~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W  125 (281)
T PF12768_consen   96 FISNDGSNFWVAGRSANGSTFLMKYDGSSW  125 (281)
T ss_pred             eeccCCceEEEeceecCCCceEEEEcCCce
Confidence            53  33 3444444 2  334666764443

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=90.82  E-value=3.8  Score=33.28  Aligned_cols=31  Identities=10%  Similarity=0.048  Sum_probs=25.4

Q ss_pred             CCeEEEEEcCCC------CEEEEEeCCCcEEEEeCCC
Q psy17902        232 APITGLAISFEC------DTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       232 ~~v~~~~~~~~~------~~l~~~~~dg~i~iwd~~~  262 (454)
                      ..|.+++|||.|      .+|++.+.+|.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            478999999954      4788889999999998663

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>COG5290 IkappaB kinase complex, IKAP component [Transcription]

Probab=90.71  E-value=15  Score=36.79  Aligned_cols=31  Identities=13%  Similarity=0.107  Sum_probs=24.7

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      -...|.+.+||.|.+.++....+..|.+++-
T Consensus       111 v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k  141 (1243)
T COG5290         111 VSNGIVAASWSADEKTWCVVTSTREILLFDK  141 (1243)
T ss_pred             ccCceEEEeeccCCceEEEEEcCceEEEEec
Confidence            3457889999999997777777788888875

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=90.69  E-value=1  Score=25.75  Aligned_cols=30  Identities=17%  Similarity=0.149  Sum_probs=20.8

Q ss_pred             CceeeeEEEEcCCCCEEEEEecCC--Cceeee
Q psy17902        407 LSGVINSLVFTSDHKHLVAGIGTE--HRFGRW  436 (454)
Q Consensus       407 ~~~~v~~l~~s~d~~~l~~~~~~d--~~i~~W  436 (454)
                      ..+.-....|||||++|+.++..+  |..-+|
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            344567789999999999886666  555444

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=90.65  E-value=16  Score=34.77  Aligned_cols=31  Identities=26%  Similarity=0.461  Sum_probs=25.9

Q ss_pred             cEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        366 WITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      .|.++...+..++|++.+.+|.|.+|++..+
T Consensus       191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~  221 (422)
T PF08801_consen  191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG  221 (422)
T ss_dssp             -EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred             ceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence            3999999999999999999999999999753

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=90.30  E-value=16  Score=34.16  Aligned_cols=232  Identities=10%  Similarity=0.050  Sum_probs=0.0

Q ss_pred             EEEEEeCCCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC-----------cEEEEeCCCc
Q psy17902        156 HVYSACKDGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS-----------NIKLWSSSLE  222 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----------~v~vw~~~~~  222 (454)
                      +++.|..+..+.++|+..  ..-......     ............-++.+.+.|+...           .+..||....
T Consensus        42 yv~gG~~~~~~~~~d~~~~~~~W~~l~~~-----p~~~r~~~~~v~~~~~IYV~GG~~~~~~~~~~~~~~~v~~YD~~~n  116 (376)
T PRK14131         42 YVGLGSAGTSWYKLDLNAPSKGWTKIAAF-----PGGPREQAVAAFIDGKLYVFGGIGKTNSEGSPQVFDDVYKYDPKTN  116 (376)
T ss_pred             EEEeCCCCCeEEEEECCCCCCCeEECCcC-----CCCCcccceEEEECCEEEEEcCCCCCCCCCceeEcccEEEEeCCCC


Q ss_pred             cEEeec--ccCCCeEEEEEc-CCCCEEEEEeCC---------------------------------------CcEEEEeC
Q psy17902        223 HLHTFT--GHKAPITGLAIS-FECDTLYSSSND---------------------------------------RSIKVWNI  260 (454)
Q Consensus       223 ~~~~~~--~~~~~v~~~~~~-~~~~~l~~~~~d---------------------------------------g~i~iwd~  260 (454)
                      .-..+.  .....-...+.. .++++++.|+.+                                       ..+.+||.
T Consensus       117 ~W~~~~~~~p~~~~~~~~~~~~~~~IYv~GG~~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~v~~YD~  196 (376)
T PRK14131        117 SWQKLDTRSPVGLAGHVAVSLHNGKAYITGGVNKNIFDGYFEDLAAAGKDKTPKDKINDAYFDKKPEDYFFNKEVLSYDP  196 (376)
T ss_pred             EEEeCCCCCCCcccceEEEEeeCCEEEEECCCCHHHHHHHHhhhhhcccchhhhhhhHHHHhcCChhhcCcCceEEEEEC


Q ss_pred             CCceeEEEeeccC-CceeEEEeecCCCEEEEeeCC----CcEEEe----eccCCeEEEEccccCCe----------EEEE
Q psy17902        261 EDRAYVETLFGHQ-SAITSLDILAKNRVISSGGTD----KSVRVW----KIQEESQLVFNGHSRGI----------DMTR  321 (454)
Q Consensus       261 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d----g~i~i~----d~~~~~~~~~~~~~~~i----------~~~~  321 (454)
                      .+......-.... .........-++++.+.|+.+    .+..+|    |..+.+-..........          ....
T Consensus       197 ~t~~W~~~~~~p~~~~~~~a~v~~~~~iYv~GG~~~~~~~~~~~~~~~~~~~~~~W~~~~~~p~~~~~~~~~~~~~~~a~  276 (376)
T PRK14131        197 STNQWKNAGESPFLGTAGSAVVIKGNKLWLINGEIKPGLRTDAVKQGKFTGNNLKWQKLPDLPPAPGGSSQEGVAGAFAG  276 (376)
T ss_pred             CCCeeeECCcCCCCCCCcceEEEECCEEEEEeeeECCCcCChhheEEEecCCCcceeecCCCCCCCcCCcCCccceEece


Q ss_pred             ecCCCEEEEEeCC----------------------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902        322 RVNDQQFITCGED----------------------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       322 ~~~~~~l~~~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      ...+..++.|+.+                      ..+.+||+.+.+-...-......         -...+..-++.++
T Consensus       277 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~~r---------~~~~av~~~~~iy  347 (376)
T PRK14131        277 YSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGELPQGL---------AYGVSVSWNNGVL  347 (376)
T ss_pred             eECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcCCCCc---------cceEEEEeCCEEE


Q ss_pred             EEecCCC------cEEEEEcCCCceeeE
Q psy17902        380 ASGSYDG------CVKLWKITPKRTLEF  401 (454)
Q Consensus       380 ~~~~~dg------~v~iwd~~~~~~~~~  401 (454)
                      +.|+...      .|..+....+.....
T Consensus       348 v~GG~~~~~~~~~~v~~~~~~~~~~~~~  375 (376)
T PRK14131        348 LIGGETAGGKAVSDVTLLSWDGKKLTVE  375 (376)
T ss_pred             EEcCCCCCCcEeeeEEEEEEcCCEEEEe

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=90.24  E-value=15  Score=33.89  Aligned_cols=187  Identities=11%  Similarity=0.142  Sum_probs=105.3

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec----CCCE--EEEee-CC---CcEEEeeccC--CeEEE
Q psy17902        242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA----KNRV--ISSGG-TD---KSVRVWKIQE--ESQLV  309 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~~-~d---g~i~i~d~~~--~~~~~  309 (454)
                      ...+++....++-+.+||+. |+.+..+.  .+.++.+..-.    .+..  |+.++ .+   ..|++|.+..  +....
T Consensus        67 ~kSlIigTdK~~GL~VYdL~-Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~  143 (381)
T PF02333_consen   67 AKSLIIGTDKKGGLYVYDLD-GKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTD  143 (381)
T ss_dssp             GG-EEEEEETTTEEEEEETT-S-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE
T ss_pred             ccceEEEEeCCCCEEEEcCC-CcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceE
Confidence            45678888888899999998 55555553  23444444321    2322  33333 32   4699998763  33222


Q ss_pred             Ecccc-------CCe--EEEEec--CCC-EEEEEeCCCCEEEEecCC---C----ccceeeecccCCCCCCCCCCcEEEE
Q psy17902        310 FNGHS-------RGI--DMTRRV--NDQ-QFITCGEDGTLSLWSILK---K----VPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       310 ~~~~~-------~~i--~~~~~~--~~~-~l~~~~~dg~i~iwd~~~---~----~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      .....       ..+  .|+...  .+. +.++...+|.+..|.+..   +    ..++.+....          .+-.|
T Consensus       144 v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~s----------Q~EGC  213 (381)
T PF02333_consen  144 VTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGS----------QPEGC  213 (381)
T ss_dssp             -CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-----------EEEE
T ss_pred             cCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCC----------cceEE
Confidence            22111       112  233222  233 556677889998887742   2    2355554422          38889


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCC-----ceeeEeccCCCceeeeEEEEc--CCC-CEEEEEecCCCceeeeeeeCC
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPK-----RTLEFLQDIPLSGVINSLVFT--SDH-KHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~-----~~~~~~~~~~~~~~v~~l~~s--~d~-~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      .......+|+.|-.+--|.-|+....     ..+...........|-.|++-  +++ .||++++-.++...+|+....
T Consensus       214 VVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~  292 (381)
T PF02333_consen  214 VVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP  292 (381)
T ss_dssp             EEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred             EEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence            99988889999999877777777532     222222222234557777764  344 478877677888999997653

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast)

Probab=90.20  E-value=21  Score=35.50  Aligned_cols=159  Identities=8%  Similarity=0.085  Sum_probs=85.2

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE---Eeec-ccCCCeEEEEEcC------CCCEEEEEeC-C---CcE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHL---HTFT-GHKAPITGLAISF------ECDTLYSSSN-D---RSI  255 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~---~~~~-~~~~~v~~~~~~~------~~~~l~~~~~-d---g~i  255 (454)
                      ...|..+.|.+++..+++...+|.|.+|+.....+   ..+. .+...+.--+|-+      ...++++.+. +   -..
T Consensus       129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~y  208 (670)
T PF10395_consen  129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLSY  208 (670)
T ss_pred             ccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEEE
Confidence            45789999999999999999999999999811111   1111 1222111112222      2345555444 3   246


Q ss_pred             EEEeC-CCceeEEEee---ccCCcee--EEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEc---ccc-CCeEEEEe
Q psy17902        256 KVWNI-EDRAYVETLF---GHQSAIT--SLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFN---GHS-RGIDMTRR  322 (454)
Q Consensus       256 ~iwd~-~~~~~~~~~~---~~~~~v~--~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~---~~~-~~i~~~~~  322 (454)
                      +++.+ .....+..+.   .+.....  .+++. +|.+..-  .++.|.+|++...+..   .+.   ... ..+..+..
T Consensus       209 kL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~-~G~LY~l--~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~~  285 (670)
T PF10395_consen  209 KLISLSNESSSIFELSSTILENFGLEDSKFCYQ-FGKLYQL--SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLKP  285 (670)
T ss_pred             EEEEeccCCcceEEeehheeccCCcccceEEEe-CCEEEEE--eCCEEEEEEcCCceEEEEEEechhhccccccceEeec
Confidence            67777 1122222222   1111222  23333 4543322  6789999999876554   111   111 23334444


Q ss_pred             cCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        323 VNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       323 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      +..++++.+ .++.|++.|+.-...+..+.
T Consensus       286 ~s~nRvLLs-~~nkIyLld~~~~siLse~~  314 (670)
T PF10395_consen  286 PSPNRVLLS-VNNKIYLLDLKFESILSEFE  314 (670)
T ss_pred             CCCCeEEEE-cCCEEEEEeehhhhhhhhhh
Confidence            555555443 46789999997776666655

It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=89.97  E-value=9.9  Score=34.71  Aligned_cols=103  Identities=12%  Similarity=0.126  Sum_probs=57.4

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc---EEee----cccCCCeEEEEEcCC---CCEEEEEeC-C--------
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEH---LHTF----TGHKAPITGLAISFE---CDTLYSSSN-D--------  252 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~-d--------  252 (454)
                      ....|+|.|+|+++++ ...|.|++++..+..   +..+    .........++++|+   ..+|++... .        
T Consensus         3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~   81 (331)
T PF07995_consen    3 NPRSMAFLPDGRLLVA-ERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDND   81 (331)
T ss_dssp             SEEEEEEETTSCEEEE-ETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEE
T ss_pred             CceEEEEeCCCcEEEE-eCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcc
Confidence            4678999999987665 458999999953332   2222    234457889999994   334444333 1        


Q ss_pred             CcEEEEeCCCc-------eeE-EEeec---cCCceeEEEeecCCCEEEEeeCCC
Q psy17902        253 RSIKVWNIEDR-------AYV-ETLFG---HQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       253 g~i~iwd~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                      ..|.-|.+...       +.+ ..+..   .......|.|.|+|.+.++.+..+
T Consensus        82 ~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~  135 (331)
T PF07995_consen   82 NRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGG  135 (331)
T ss_dssp             EEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TT
T ss_pred             eeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCC
Confidence            23444544332       111 11122   233456799999997776665443

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=89.49  E-value=3  Score=33.85  Aligned_cols=31  Identities=6%  Similarity=0.055  Sum_probs=24.8

Q ss_pred             CceeEEEeecCC------CEEEEeeCCCcEEEeeccC
Q psy17902        274 SAITSLDILAKN------RVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       274 ~~v~~~~~~~~~------~~l~~~~~dg~i~i~d~~~  304 (454)
                      ..|.+++|+|.|      .+|++.+.++.|.||....
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            478999999954      4778888899999997664

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>KOG1983|consensus

Probab=89.44  E-value=19  Score=38.21  Aligned_cols=228  Identities=16%  Similarity=0.125  Sum_probs=104.9

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKA--PITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      .....++|+|.-.++|.|+..|.|+++-..+-.......-..  .+..+.+-.......+...+..+.+|.......+  
T Consensus        36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~--  113 (993)
T KOG1983|consen   36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGV--  113 (993)
T ss_pred             CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeeccccccee--
Confidence            356678999999999999999999999864433222211111  1222222222222333334445555554322211  


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC-C
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK-K  345 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~-~  345 (454)
                        -+...+++....+--.+ +-+ ..+.+++||..-....  .+.............       .+. ..-..|.... .
T Consensus       114 --~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~s~-~~~~~~~~~~~~  181 (993)
T KOG1983|consen  114 --FLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYES-------LSP-TLSIEGLVIDLD  181 (993)
T ss_pred             --ecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeee-------ecc-ceeeeccccccc
Confidence              12333444443322233 445 7888888886543222  111111111000000       000 0000011111 1


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEE
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVA  425 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~  425 (454)
                      .....+....  .....+...+.+..+......+ .+..-+.+-+|+.........+..       ....+++++..+++
T Consensus       182 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~v~  251 (993)
T KOG1983|consen  182 TVLISLPDAY--LGLSLIEYESLQVLYYSPTKIL-IGFNRGLVVIKDRASKYVQSAYLP-------NGQLESRDGSHFVS  251 (993)
T ss_pred             cceeeccccc--ccccccccccceeeeecCCCcc-eeeeeeeeeehhcccccchhhccc-------ccccCccCCceEEE
Confidence            1111111000  0111123334555444433333 344456777777655433333322       11122888998888


Q ss_pred             EecCCCceeeeeeeCCCe
Q psy17902        426 GIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       426 ~~~~d~~i~~W~~~~~~~  443 (454)
                      + -.||.+.+|+...+..
T Consensus       252 ~-h~Dgs~~fWd~s~g~~  268 (993)
T KOG1983|consen  252 Y-HTDGSYAFWDVSSGKL  268 (993)
T ss_pred             E-EecCCEEeeecCCCce
Confidence            8 7999999999988654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	454
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		5e-18
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		6e-12
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		3e-11
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		7e-12
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		3e-11
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		7e-12
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-10
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		1e-11
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		3e-11
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-11
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-11
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		1e-11
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		1e-11
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		3e-11
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		3e-11
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		3e-11
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		4e-11
2gnq_A	336	Structure Of Wdr5 Length = 336		4e-11
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		5e-11
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-11
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		5e-11
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		5e-11
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		5e-11
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		5e-11
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		5e-11
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		6e-11
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		6e-11
2h9l_A	329	Wdr5delta23 Length = 329		6e-11
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		6e-11
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		6e-11
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		7e-11
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		7e-11
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		8e-11
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		1e-10
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-10
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		7e-10
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		9e-09
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		1e-08
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		1e-08
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		3e-08
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		5e-08
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		1e-07
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		3e-07
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		3e-07
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		3e-07
1r5m_A	425	Crystal Structure Of The C-Terminal Wd40 Domain Of		5e-07
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		8e-07
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		9e-07
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		1e-06
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		1e-05
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		2e-06
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		1e-05
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		2e-06
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		1e-05
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		2e-06
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		1e-05
3acp_A	417	Crystal Structure Of Yeast Rpn14, A Chaperone Of Th		2e-06
3vl1_A	420	Crystal Structure Of Yeast Rpn14 Length = 420		2e-06
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		2e-06
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		1e-05
4g56_B	357	Crystal Structure Of Full Length Prmt5/mep50 Comple		4e-06
1gxr_A	337	Wd40 Region Of Human Groucho/tle1 Length = 337		4e-06
3zwl_B	369	Structure Of Eukaryotic Translation Initiation Fact		5e-06
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		7e-06
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		8e-06
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		7e-05
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		2e-04
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		2e-04
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		6e-04

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKW-----LLETRSKVCSSPFVKTDRKSYPPIXX 195
           H +S+  +A   D + + SA  D  +  W     LL+T +   SS +      ++ P   
Sbjct: 261 HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVW----GVAFSP--- 313
Query: 196 XXXXXXXXXXXSGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                      S  ++  +KLW+ + +HL T TGH + + G+A S +  T+ S+S+D+++
Sbjct: 314 -----DGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 368
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSR 315
           K+WN  +   ++TL GH S++  +      + I+S   DK+V++W    +      GHS 
Sbjct: 369 KLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS 427
Query: 316 GI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH 374
            +  +    +DQ   +  +D T+ LW+   ++    +    G+ SS      +  VA   
Sbjct: 428 SVWGVAFSPDDQTIASASDDKTVKLWNRNGQL----LQTLTGHSSS------VRGVAFSP 477
Query: 375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDHKHLVA 425
           +   +AS S D  VKLW     R  + LQ +   S  +  + F+ D + + +
Sbjct: 478 DGQTIASASDDKTVKLW----NRNGQLLQTLTGHSSSVRGVAFSPDGQTIAS 525

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVK 184
           +A+  V+  +   + H   +T +A ++   ++  SA +D  +I W L    +    P V+
Sbjct: 1   MASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VR 59
Query: 185 TDRKSYPPIXXXXXXXXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFEC 243
           + +     +             S   +  ++LW  ++ E    F GHK+ +  + I  + 
Sbjct: 60  SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA 119
Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSV 297
             + S S D++IKVW I+ +  + TL GH   ++ + ++   +       I S G DK V
Sbjct: 120 SMIISGSRDKTIKVWTIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178
Query: 298 RVWKI-QEESQLVFNGHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAH 355
           + W + Q + +  F GH+  I+      D   I + G+DG + LW++  K   +T+    
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD 238
Query: 356 GYDSSSSEPN--WITSVAC 372
              S +  PN  W+ +   
Sbjct: 239 EVFSLAFSPNRYWLAAATA 257

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K  +I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 178 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           + +  L  QD      + SL F+ +   L A   T
Sbjct: 229 KAMYTLSAQD-----EVFSLAFSPNRYWLAAATAT 258

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 14/259 (5%)
Query: 126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVK 184
           +A+  V+  +   + H   +T +A ++   ++  SA +D  +I W L    +    P V+
Sbjct: 1   MASNEVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VR 59
Query: 185 TDRKSYPPIXXXXXXXXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFEC 243
           + +     +             S   +  ++LW  ++ E    F GHK+ +  + I  + 
Sbjct: 60  SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA 119
Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSV 297
             + S S D++IKVW I+ +  + TL GH   ++ + ++   +       I S G DK V
Sbjct: 120 SMIISGSRDKTIKVWTIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMV 178
Query: 298 RVWKI-QEESQLVFNGHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAH 355
           + W + Q + +  F GH+  I+      D   I + G+DG + LW++  K   +T+    
Sbjct: 179 KAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD 238
Query: 356 GYDSSSSEPN--WITSVAC 372
              S +  PN  W+ +   
Sbjct: 239 EVFSLAFSPNRYWLAAATA 257

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K  +I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 178 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           + +  L  QD      + SL F+ +   L A   T
Sbjct: 229 KAMYTLSAQD-----EVFSLAFSPNRYWLAAATAT 258

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 141 HRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXXX 199
           H   +T +A ++   ++  SA +D  +I W L    +    P V++ +     +      
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLT 74
Query: 200 XXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
                  S   +  ++LW  ++ E    F GHK+ +  + I  +   + S S D++IKVW
Sbjct: 75  ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDKKASXIISGSRDKTIKVW 134
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSVRVWKI-QEESQLVFN 311
            I+ +  + TL GH   ++ + ++   +       I S G DK V+ W + Q + +  F 
Sbjct: 135 TIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKXVKAWNLNQFQIEADFI 193
Query: 312 GHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN--WIT 368
           GH+  I+      D   I + G+DG + LW++  K   +T+       S +  PN  W+ 
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIXLWNLAAKKAXYTLSAQDEVFSLAFSPNRYWLA 253
Query: 369 SVAC 372
           +   
Sbjct: 254 AATA 257

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDK 117
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K   I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 118 KASXIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKX 177
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 178 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIXLWNLAAK 228
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           +    L  QD      + SL F+ +   L A   T
Sbjct: 229 KAXYTLSAQD-----EVFSLAFSPNRYWLAAATAT 258

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 141 HRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXXX 199
           H   +T +A ++   ++  SA +D  +I W L    +    P V++ +     +      
Sbjct: 10  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLT 68
Query: 200 XXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
                  S   +  ++LW  ++ E    F GHK+ +  + I  +   + S S D++IKVW
Sbjct: 69  ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 128
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSVRVWKI-QEESQLVFN 311
            I+ +  + TL GH   ++ + ++   +       I S G DK V+ W + Q + +  F 
Sbjct: 129 TIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 187
Query: 312 GHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN--WIT 368
           GH+  I+      D   I + G+DG + LW++  K   +T+       S +  PN  W+ 
Sbjct: 188 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLA 247
Query: 369 SVAC 372
           +   
Sbjct: 248 AATA 251

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 52  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 111
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K  +I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 112 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 171
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 172 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLWNLAAK 222
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           + +  L  QD      + SL F+ +   L A   T
Sbjct: 223 KAMYTLSAQD-----EVFSLAFSPNRYWLAAATAT 252

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 141 HRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXXX 199
           H   +T +A ++   ++  SA +D  +I W L    +    P V++ +     +      
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLT 74
Query: 200 XXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
                  S   +  ++LW  ++ E    F GHK+ +  + I  +   + S S D++IKVW
Sbjct: 75  ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSVRVWKI-QEESQLVFN 311
            I+ +  + TL GH   ++ + ++   +       I S G DK V+ W + Q + +  F 
Sbjct: 135 TIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 193
Query: 312 GHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN--WIT 368
           GH+  I+      D   I + G+DG + LW++  K   +T+       S +  PN  W+ 
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLA 253
Query: 369 SVAC 372
           +   
Sbjct: 254 AATA 257

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K  +I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 178 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           + +  L  QD      + SL F+ +   L A   T
Sbjct: 229 KAMYTLSAQD-----EVFSLAFSPNRYWLAAATAT 258

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 27/209 (12%)
Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
             GH A ++ +A+S   +   S+S D S+++WN+++        GH   + S+     NR
Sbjct: 63  LEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNR 122
Query: 287 VISSGGTDKSVRVWKIQEESQ--LVFNGHSRGIDMTR---RVNDQQFITCGEDGTLSLWS 341
            I SGG D ++RVW ++ E    L    H+  +   R    ++    ++ G D  + +W 
Sbjct: 123 QIVSGGRDNALRVWNVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWD 182
Query: 342 -----ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
                ++  +  HT              N++TSV    +  L AS   DG  +LW +T  
Sbjct: 183 LATGRLVTDLKGHT--------------NYVTSVTVSPDGSLCASSDKDGVARLWDLTKG 228
Query: 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVA 425
              E L ++     IN + F+ +   + A
Sbjct: 229 ---EALSEMAAGAPINQICFSPNRYWMCA 254

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 107/244 (43%), Gaps = 14/244 (5%)
Query: 141 HRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXXX 199
           H   +T +A ++   ++  SA +D  +I W L    +    P V++ +     +      
Sbjct: 16  HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVP-VRSFKGHSHIVQDCTLT 74
Query: 200 XXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
                  S   +  ++LW  ++ E    F GHK+ +  + I  +   + S S D++IKVW
Sbjct: 75  ADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVW 134
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRV------ISSGGTDKSVRVWKI-QEESQLVFN 311
            I+ +  + TL GH   ++ + ++   +       I S G DK V+ W + Q + +  F 
Sbjct: 135 TIKGQC-LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFI 193
Query: 312 GHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN--WIT 368
           GH+  I+      D   I + G+DG + LW++  K   +T+       S +  PN  W+ 
Sbjct: 194 GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLA 253
Query: 369 SVAC 372
           +   
Sbjct: 254 AATA 257

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 96/215 (44%), Gaps = 23/215 (10%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + +F GH   +    ++ +     S+S D+++++W++      +   GH+S + S+DI  
Sbjct: 58  VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQ-------FITCGEDGT 336
           K  +I SG  DK+++VW I+ +      GH+  +   R V +++        I+ G D  
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +  W+ L +       + H  +        I ++    +  L+AS   DG + LW +  K
Sbjct: 178 VKAWN-LNQFQIEADFIGHNSN--------INTLTASPDGTLIASAGKDGEIMLWNLAAK 228
Query: 397 RTLEFL--QDIPLSGVINSLVFTSDHKHLVAGIGT 429
           + +  L  QD      + SL F+ +   L A   T
Sbjct: 229 KAMYTLSAQD-----EVFSLAFSPNRYWLAAATAT 258

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   +
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 78
Query: 284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWS 341
            + ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W 
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 342 I-----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +     LK +P H+ PV              ++V    +  L+ S SYDG  ++W     
Sbjct: 139 VKTGMCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASG 184
Query: 397 RTLEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           + L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 185 QCLKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 227

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 29/228 (12%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283
           + T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   +
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 78
Query: 284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWS 341
            + ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W 
Sbjct: 79  DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 138
Query: 342 I-----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           +     LK +P H+ PV              ++V    +  L+ S SYDG  ++W     
Sbjct: 139 VKTGMCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASG 184
Query: 397 RTLEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           + L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 185 QCLKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNDLKLWDYSKG 227

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 40  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 160 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 205
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 206 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 246

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 42  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 101
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 102 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 161
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 162 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 207
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 208 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 248

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 83
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 84  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 143
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 144 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 189
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 190 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 230

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 14  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 73
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 74  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 134 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 179
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 180 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 220

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 18  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 77
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 78  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 138 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 184 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 224

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 65.9 bits (159), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 18  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 77
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 78  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 138 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 183
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 184 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 224

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 19  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 78
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 79  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 138
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 139 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 184
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 185 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 225

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 83
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 84  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 143
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 144 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 189
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 190 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 230

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 23  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 82
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 83  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 142
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 143 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 188
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 189 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 229

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 24  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 83
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 84  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 143
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 144 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 189
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 190 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 230

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 17  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 76
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 77  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 136
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 137 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 182
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 183 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 223

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 35  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 94
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 95  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 154
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 155 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 200
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 201 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 241

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   +    + FE + + + ++D+ I+V++  ++ ++  L GH   + +L   A  
Sbjct: 116 TLRGHXTSVI-TCLQFEDNYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALK-YAHG 173
Query: 286 RVISSGGTDKSVRVWKIQEE-SQLVFNGHS---RGIDMTRRVNDQQFITCGEDGTLSLWS 341
            ++ SG TD++VRVW I++     VF GH+   R +D+    N +  +T   D TL +W 
Sbjct: 174 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233
Query: 342 ILKK--VPTHTIPVAHGYDSSSSEPN-WITSVACLH---------NSDLVASGSYDGCVK 389
           + K+  VP H     +     + E N +   V   H         + ++V SGSYD  + 
Sbjct: 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHXASVRTVSGHGNIVVSGSYDNTLI 293
Query: 390 LWKITPKRTLEFL 402
           +W +   + L  L
Sbjct: 294 VWDVAQXKCLYIL 306

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 207 SGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---D 262
           +G ++S +++W  ++ E L+T   H   +  L + F    + + S DRSI VW++    D
Sbjct: 188 TGSSDSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTD 245
Query: 263 RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHSRGIDMTR 321
                 L GH++A+  +D    ++ I S   D++++VW     E     NGH RGI    
Sbjct: 246 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACL 302
Query: 322 RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVA 380
           +  D+  ++   D T+ LW I        + V  G++           V C+  ++  + 
Sbjct: 303 QYRDRLVVSGSSDNTIRLWDIECGA---CLRVLEGHEEL---------VRCIRFDNKRIV 350
Query: 381 SGSYDGCVKLWKI-------TPKRTLEFLQDIPLSGVINSLVF 416
           SG+YDG +K+W +        P  TL     +  SG +  L F
Sbjct: 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF 393

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 80
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 81  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 140
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 141 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 186
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 187 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 227

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L SSS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 80
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 81  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 140
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 141 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 186
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 187 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 227

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   +    + FE + + + ++D+ I+V++  ++ ++  L GH   + +L   A  
Sbjct: 116 TLRGHMTSVI-TCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK-YAHG 173
Query: 286 RVISSGGTDKSVRVWKIQEE-SQLVFNGHS---RGIDMTRRVNDQQFITCGEDGTLSLWS 341
            ++ SG TD++VRVW I++     VF GH+   R +D+    N +  +T   D TL +W 
Sbjct: 174 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233
Query: 342 ILKK--VPTHTIPVAHGYDSSSSEPN-WITSVACLH---------NSDLVASGSYDGCVK 389
           + K+  VP H     +     + E N +   V   H         + ++V SGSYD  + 
Sbjct: 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 293
Query: 390 LWKITPKRTLEFL 402
           +W +   + L  L
Sbjct: 294 VWDVAQMKCLYIL 306

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 20/202 (9%)
Query: 207 SGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY 265
           SG  ++ +++W   + + LH   GH A +    + ++   + S + D  +KVW+ E    
Sbjct: 214 SGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQYDGRRVVSGAYDFMVKVWDPETETC 271
Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN 324
           + TL GH + + SL     + V  SG  D S+RVW ++  + +    GH + +     + 
Sbjct: 272 LHTLQGHTNRVYSLQFDGIHVV--SGSLDTSIRVWDVETGNCIHTLTGH-QSLTSGMELK 328
Query: 325 DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGS 383
           D   ++   D T+ +W I       T+   + + S+         V CL  N + V + S
Sbjct: 329 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA---------VTCLQFNKNFVITSS 379
Query: 384 YDGCVKLWKITPKRTLEFLQDI 405
            DG VKLW +   +T EF++++
Sbjct: 380 DDGTVKLWDL---KTGEFIRNL 398

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 226 TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285
           T  GH   ++ +  S   + L +SS D+ IK+W   D  + +T+ GH+  I+ +   + +
Sbjct: 21  TLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 80
Query: 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGE-DGTLSLWSI- 342
            ++ S   DK++++W +     L    GHS  +           I  G  D ++ +W + 
Sbjct: 81  NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 140
Query: 343 ----LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
               LK +P H+ PV              ++V    +  L+ S SYDG  ++W     + 
Sbjct: 141 TGKCLKTLPAHSDPV--------------SAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 186
Query: 399 LEFLQD---IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441
           L+ L D    P+S V     F+ + K+++A    ++    W   KG
Sbjct: 187 LKTLIDDDNPPVSFV----KFSPNGKYILAAT-LDNTLKLWDYSKG 227

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/315 (20%), Positives = 119/315 (37%), Gaps = 40/315 (12%)
Query: 135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIX 194
           K+    HR+ +T +        + SA +D  I  W  ET        F +T +     + 
Sbjct: 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYET------GDFERTLKGHTDSVQ 154
Query: 195 XXXXXXXXXXXXSGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
                       S   +  IKLW     E + T  GH   ++ ++I    D + S+S D+
Sbjct: 155 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDK 214
Query: 254 SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-EESQLVFNG 312
           +IK+W ++    V+T  GH+  +  +       +I+S   D++VRVW +  +E +     
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 313 HSRGIDMTRRVNDQQFITCGE---------------------DGTLSLWSILKKVPTHTI 351
           H   ++      +  + +  E                     D T+ +W +   +   T+
Sbjct: 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334
Query: 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI 411
               G+D      NW+  V        + S + D  +++W    KR ++ L        +
Sbjct: 335 V---GHD------NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN--AHEHFV 383
Query: 412 NSLVFTSDHKHLVAG 426
            SL F     ++V G
Sbjct: 384 TSLDFHKTAPYVVTG 398

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 25/209 (11%)
Query: 214 IKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH 272
           I++W   + + +    GH+  I  L      D L S S DR++++W++       TL   
Sbjct: 147 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 206
Query: 273 QSAITSLDILAKNRVISSGGTDKSVRVW---------KIQEESQLVFNGHSRGIDMTRRV 323
               T        + I++G  D++VRVW         ++  E++    GH   +      
Sbjct: 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE-SGTGHKDSVYSVVFT 265
Query: 324 NDQQFITCGE-DGTLSLWSILK-------KVP-THTIPVAHGYDSSSSEPNWITSVACLH 374
            D Q +  G  D ++ LW++         K P + T  V +         +++ SVA   
Sbjct: 266 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY-----IGHKDFVLSVATTQ 320
Query: 375 NSDLVASGSYDGCVKLWKITPKRTLEFLQ 403
           N + + SGS D  V  W       L  LQ
Sbjct: 321 NDEYILSGSKDRGVLFWDKKSGNPLLMLQ 349

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 229 GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI 288
           GH   ++ + IS +     S S D ++++W++          GH   + S+   + NR I
Sbjct: 61  GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 120
Query: 289 SSGGTDKSVRVWK--------IQEESQLVFNGHSRGIDMTR---RVNDQQFITCGEDGTL 337
            SG  DK++++W         +Q+ES      HS  +   R     ++   ++CG D  +
Sbjct: 121 VSGSRDKTIKLWNTLGVCKYTVQDES------HSEWVSCVRFSPNSSNPIIVSCGWDKLV 174
Query: 338 SLWSILKKVPTHTIPVAH-GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
            +W+ L      T  + H GY         + +V    +  L ASG  DG   LW +   
Sbjct: 175 KVWN-LANCKLKTNHIGHTGY---------LNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
Query: 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428
           + L  L       +IN+L F+ +   L A  G
Sbjct: 225 KHLYTLDG---GDIINALCFSPNRYWLCAATG 253

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 229 GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI 288
           GH   ++ + IS +     S S D ++++W++          GH   + S+   + NR I
Sbjct: 84  GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 143
Query: 289 SSGGTDKSVRVWK--------IQEESQLVFNGHSRGIDMTR---RVNDQQFITCGEDGTL 337
            SG  DK++++W         +Q+ES      HS  +   R     ++   ++CG D  +
Sbjct: 144 VSGSRDKTIKLWNTLGVCKYTVQDES------HSEWVSCVRFSPNSSNPIIVSCGWDKLV 197
Query: 338 SLWSILKKVPTHTIPVAH-GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
            +W+ L      T  + H GY         + +V    +  L ASG  DG   LW +   
Sbjct: 198 KVWN-LANCKLKTNHIGHTGY---------LNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247
Query: 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428
           + L  L       +IN+L F+ +   L A  G
Sbjct: 248 KHLYTLDG---GDIINALCFSPNRYWLCAATG 276

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 21/217 (9%)
Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
            TGH   +  + +S +     S S D  +++W++          GH   + S+     NR
Sbjct: 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 485
Query: 287 VISSGGTDKSVRVWKIQEESQLVFN----GHSRGIDMTR-RVNDQQ--FITCGEDGTLSL 339
            I S   D+++++W    E +   +    GH   +   R   N  Q   ++   D T+ +
Sbjct: 486 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 545
Query: 340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
           W++       T+    GY         +++VA   +  L ASG  DG V LW +   + L
Sbjct: 546 WNLSNCKLRSTLAGHTGY---------VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596
Query: 400 EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW 436
             L+    + VI++L F+ +   L A   TEH    W
Sbjct: 597 YSLE---ANSVIHALCFSPNRYWLCA--ATEHGIKIW 628

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 42/246 (17%)
Query: 207 SGDNNSNIKLWSSSLEHLHTF--------TGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
           SG  +  + +W    E  + +        TGH   ++ LA+S E     SSS D+++++W
Sbjct: 44  SGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLW 103
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF---NGHSR 315
           ++      +   GHQS + S+     NR I S G ++ +++W I  E +        HS 
Sbjct: 104 DLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSD 163
Query: 316 GIDMTRR------VNDQQ-----FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364
            +   R        N  Q     F + G DG L +W+   ++          Y   + E 
Sbjct: 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIR---------YTFKAHES 214
Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWKI----TPKRTLEFLQDIPLSGVINSLVFTSDH 420
           N +  ++   N   +A+G  D  + +W I     P+R  +          IN + F    
Sbjct: 215 N-VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD------AGSTINQIAFNPKL 267
Query: 421 KHLVAG 426
           + +  G
Sbjct: 268 QWVAVG 273

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLD 280
           E +  F  H   I  +A+      + S S+D ++K+WN E+   +E  F GH+  +  + 
Sbjct: 88  EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147
Query: 281 ILAKN-RVISSGGTDKSVRVWKIQEESQ--LVFNGHSRG---IDMTRRVNDQQFITCGED 334
              K+    +SG  D++V+VW + + +    +  G  RG   +D     +    IT  +D
Sbjct: 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207
Query: 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLW 391
            T+ +W    K    T+    G+ S+        S A  H +  ++ SGS DG +K+W
Sbjct: 208 LTIKIWDYQTKSCVATL---EGHMSN-------VSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLD 280
           E +  F  H   I  +A+      + S S+D ++K+WN E+   +E  F GH+  +  + 
Sbjct: 88  EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147
Query: 281 ILAKN-RVISSGGTDKSVRVWKIQEESQ--LVFNGHSRG---IDMTRRVNDQQFITCGED 334
              K+    +SG  D++V+VW + + +    +  G  RG   +D     +    IT  +D
Sbjct: 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207
Query: 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLW 391
            T+ +W    K    T+    G+ S+        S A  H +  ++ SGS DG +K+W
Sbjct: 208 LTIKIWDYQTKSCVATL---EGHMSN-------VSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 18/183 (9%)
Query: 212 SNIKLWSSSLEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF 270
           + + L+++S E  L+T  GH+  +  L  SF+   + S S D++ KVW  ++ + V  L 
Sbjct: 84  NGVPLFATSGEDPLYTLIGHQGNVCSL--SFQDGVVISGSWDKTAKVW--KEGSLVYNLQ 139
Query: 271 GHQSAITSLDILA--KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQF 328
            H +++    +++  +N+ +++   DK++++W+  +  +     H+  +     V+D  F
Sbjct: 140 AHNASVWDAKVVSFSENKFLTAS-ADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHF 198
Query: 329 ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV 388
           I+C  DG      ++K V  HT  V   Y+   S   ++  +  L N D+V+ G  D  V
Sbjct: 199 ISCSNDG------LIKLVDXHTGDVLRTYEGHES---FVYCIKLLPNGDIVSCGE-DRTV 248
Query: 389 KLW 391
           ++W
Sbjct: 249 RIW 251

>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2 Length = 425

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 254 SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNG 312
           +I V+ I ++     L GH   I+ L+    N+++ S   D ++R+W      SQ  F G
Sbjct: 228 AIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG 287
Query: 313 HSRGIDMTRRVNDQQFITCGEDGTLSLWSI 342
           HS+ I     V D + I+C  DG++ LWS+
Sbjct: 288 HSQSIVSASWVGDDKVISCSMDGSVRLWSL 317

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLD 280
           E +  F  H   I  +A+      + S S+D ++K+WN E+   +E  F GH+  +  + 
Sbjct: 88  EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147
Query: 281 ILAKN-RVISSGGTDKSVRVWKIQEESQ--LVFNGHSRG---IDMTRRVNDQQFITCGED 334
              K+    +SG  D++V+VW + + +    +  G  RG   +D     +    IT  +D
Sbjct: 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207
Query: 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLW 391
            T+ +W    K    T+    G+ S+        S A  H +  ++ SGS DG +K+W
Sbjct: 208 LTIKIWDYQTKSCVATL---EGHMSN-------VSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 18/178 (10%)
Query: 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLD 280
           E +  F  H   I  +A+      + S S+D ++K+WN E+   +E  F GH+  +  + 
Sbjct: 88  EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147
Query: 281 ILAKN-RVISSGGTDKSVRVWKIQEESQ--LVFNGHSRG---IDMTRRVNDQQFITCGED 334
              K+    +SG  D++V+VW + + +    +  G  RG   +D     +    IT  +D
Sbjct: 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207
Query: 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLW 391
            T+ +W    K    T+    G+ S+        S A  H +  ++ SGS DG +K+W
Sbjct: 208 LTIKIWDYQTKSCVATL---EGHMSN-------VSFAVFHPTLPIIISGSEDGTLKIW 255

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXX 198
           + H A I  +   +DS+ + SA +DG +I W   T +KV + P     R S+        
Sbjct: 52  RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL----RSSWVMTCAYAP 107
Query: 199 XXXXXXXXSGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                     DN     N+K    ++       GH   ++      + + + +SS D + 
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTC 166
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHS 314
            +W+IE      T  GH   + SL +    R+  SG  D S ++W ++E   +  F GH 
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 315 RGID-MTRRVNDQQFITCGEDGTLSLWSI 342
             I+ +    N   F T  +D T  L+ +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDL 255

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289
           H   +  L+++ +     S + D S K+W++ +    +T  GH+S I ++         +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 290 SGGTDKSVRVWKIQEESQLVFNGHSR---GIDMTRRVNDQQFITCG-EDGTLSLWSILKK 345
           +G  D + R++ ++ + +L+   H     GI         + +  G +D   ++W  LK 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK- 301
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD---LVASGSYDGCVKLWK 392
                  V  G+D+          V+CL  +D    VA+GS+D  +K+W 
Sbjct: 302 --ADRAGVLAGHDN---------RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXX 198
           + H A I  +   +DS+ + SA +DG +I W   T +KV + P     R S+        
Sbjct: 52  RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL----RSSWVMTCAYAP 107
Query: 199 XXXXXXXXSGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                     DN     N+K    ++       GH   ++      + + + +SS D + 
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTC 166
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHS 314
            +W+IE      T  GH   + SL +    R+  SG  D S ++W ++E   +  F GH 
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 315 RGID-MTRRVNDQQFITCGEDGTLSLWSI 342
             I+ +    N   F T  +D T  L+ +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDL 255

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289
           H   +  L+++ +     S + D S K+W++ +    +T  GH+S I ++         +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 290 SGGTDKSVRVWKIQEESQLVFNGHSR---GIDMTRRVNDQQFITCG-EDGTLSLWSILKK 345
           +G  D + R++ ++ + +L+   H     GI         + +  G +D   ++W  LK 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK- 301
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD---LVASGSYDGCVKLWK 392
                  V  G+D+          V+CL  +D    VA+GS+D  +K+W 
Sbjct: 302 --ADRAGVLAGHDN---------RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXX 198
           + H A I  +   +DS+ + SA +DG +I W   T +KV + P     R S+        
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL----RSSWVMTCAYAP 107
Query: 199 XXXXXXXXSGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                     DN     N+K    ++       GH   ++      + + + +SS D + 
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTC 166
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHS 314
            +W+IE      T  GH   + SL +    R+  SG  D S ++W ++E   +  F GH 
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 315 RGID-MTRRVNDQQFITCGEDGTLSLWSI 342
             I+ +    N   F T  +D T  L+ +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDL 255

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289
           H   +  L+++ +     S + D S K+W++ +    +T  GH+S I ++         +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 290 SGGTDKSVRVWKIQEESQLVFNGHSR---GIDMTRRVNDQQFITCG-EDGTLSLWSILKK 345
           +G  D + R++ ++ + +L+   H     GI         + +  G +D   ++W  LK 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK- 301
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD---LVASGSYDGCVKLWK 392
                  V  G+D+          V+CL  +D    VA+GS+D  +K+W 
Sbjct: 302 --ADRAGVLAGHDN---------RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXX 198
           + H A I  +   +DS+ + SA +DG +I W   T +KV + P     R S+        
Sbjct: 52  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL----RSSWVMTCAYAP 107
Query: 199 XXXXXXXXSGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                     DN     N+K    ++       GH   ++      + + + +SS D + 
Sbjct: 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTC 166
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHS 314
            +W+IE      T  GH   + SL +    R+  SG  D S ++W ++E   +  F GH 
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 315 RGID-MTRRVNDQQFITCGEDGTLSLWSI 342
             I+ +    N   F T  +D T  L+ +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDL 255

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289
           H   +  L+++ +     S + D S K+W++ +    +T  GH+S I ++         +
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 290 SGGTDKSVRVWKIQEESQLVFNGHSR---GIDMTRRVNDQQFITCG-EDGTLSLWSILKK 345
           +G  D + R++ ++ + +L+   H     GI         + +  G +D   ++W  LK 
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK- 301
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD---LVASGSYDGCVKLWK 392
                  V  G+D+          V+CL  +D    VA+GS+D  +K+W 
Sbjct: 302 --ADRAGVLAGHDN---------RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>pdb|3ACP|A Chain A, Crystal Structure Of Yeast Rpn14, A Chaperone Of The 19s Reg Particle Of The Proteasome Length = 417

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 229 GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI 288
            H + IT L      + L SSS D  +K+W+++D +   TL GH++ +T + I+ + R +
Sbjct: 134 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 193
Query: 289 SSGGTDKSVRVWK 301
            S   D ++R+W+
Sbjct: 194 LSASLDGTIRLWE 206

>pdb|3VL1|A Chain A, Crystal Structure Of Yeast Rpn14 Length = 420

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 229 GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI 288
            H + IT L      + L SSS D  +K+W+++D +   TL GH++ +T + I+ + R +
Sbjct: 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196
Query: 289 SSGGTDKSVRVWK 301
            S   D ++R+W+
Sbjct: 197 LSASLDGTIRLWE 209

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 10/209 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIXXXXX 198
           + H A I  +   +DS+ + SA +DG +I W   T +KV + P     R S+        
Sbjct: 63  RGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL----RSSWVMTCAYAP 118
Query: 199 XXXXXXXXSGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
                     DN     N+K    ++       GH   ++      + + + +SS D + 
Sbjct: 119 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVTSSGDTTC 177
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHS 314
            +W+IE      T  GH   + SL +    R+  SG  D S ++W ++E   +  F GH 
Sbjct: 178 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 237
Query: 315 RGID-MTRRVNDQQFITCGEDGTLSLWSI 342
             I+ +    N   F T  +D T  L+ +
Sbjct: 238 SDINAICFFPNGNAFATGSDDATCRLFDL 266

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289
           H   +  L+++ +     S + D S K+W++ +    +T  GH+S I ++         +
Sbjct: 194 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 253
Query: 290 SGGTDKSVRVWKIQEESQLVFNGHSR---GIDMTRRVNDQQFITCG-EDGTLSLWSILKK 345
           +G  D + R++ ++ + +L+   H     GI         + +  G +D   ++W  LK 
Sbjct: 254 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK- 312
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSD---LVASGSYDGCVKLWK 392
                  V  G+D+          V+CL  +D    VA+GS+D  +K+W 
Sbjct: 313 --ADRAGVLAGHDN---------RVSCLGVTDDGMAVATGSWDSFLKIWN 351

>pdb|4G56|B Chain B, Crystal Structure Of Full Length Prmt5/mep50 Complexes From Xenopus Laevis Length = 357

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 249 SSNDRSIKVWNIEDRAYVETL-------FGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
           +S+  ++++W I ++   E+L       + H   + +L + +      SGG D SV+VW 
Sbjct: 111 ASDSGAVELWEILEK---ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167
Query: 302 IQEESQL-VFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKVPTHTI 351
           + +++ L  +N HS  ++        D  F++CGEDG + LW   K  P   I
Sbjct: 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI 220

>pdb|1GXR|A Chain A, Wd40 Region Of Human Groucho/tle1 Length = 337

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 11/180 (6%)
Query: 135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD---RKSYP 191
           + N   H   +  + +++ ++HVY+  K G +  W +        SP  + D   R +Y 
Sbjct: 44  QINTLNHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISHPGN--KSPVSQLDCLNRDNY- 99
Query: 192 PIXXXXXXXXXXXXXSGDNNSNIKLW--SSSLEHLHTFTGHKAPIT-GLAISFECDTLYS 248
            I              G   S + +W  ++    +       AP    LAIS +    +S
Sbjct: 100 -IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS 158
Query: 249 SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL 308
             +D +I VW++ ++  V    GH    + +DI      + +GG D +VR W ++E  QL
Sbjct: 159 CCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL 218

>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor Eif3i Complex With Eif3b C-Terminus (655-700) Length = 369

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
            TGH+ P+T +  + E D L+S S D S  VW   +   + TL GH   I S+D+    +
Sbjct: 28  LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTK 87
Query: 287 VISSGGTDKSVRVWKI 302
              +G  D S+++W +
Sbjct: 88  YCVTGSADYSIKLWDV 103

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 7/191 (3%)
Query: 207  SGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266
            S   +S I++W+           H+  +    +  +   L S S D ++KVWN+      
Sbjct: 1020 SSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL-LQDSRLLSWSFDGTVKVWNVITGRIE 1078
Query: 267  ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND 325
                 HQ  + S  I +     SS   DK+ ++W     S L    GH+  +  +    D
Sbjct: 1079 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD 1138
Query: 326  QQFITCGED-GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS 383
               +  G+D G + +W++      H+       + +++   W+T V    +S  LV++G 
Sbjct: 1139 GILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG 1198
Query: 384  YDGCVKLWKIT 394
            Y   +K W + 
Sbjct: 1199 Y---LKWWNVA 1206

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 7/191 (3%)
Query: 207  SGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266
            S   +S I++W+           H+  +    +  +   L S S D ++KVWN+      
Sbjct: 1027 SSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL-LQDSRLLSWSFDGTVKVWNVITGRIE 1085
Query: 267  ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND 325
                 HQ  + S  I +     SS   DK+ ++W     S L    GH+  +  +    D
Sbjct: 1086 RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLD 1145
Query: 326  QQFITCGED-GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS 383
               +  G+D G + +W++      H+       + +++   W+T V    +S  LV++G 
Sbjct: 1146 GILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG 1205
Query: 384  YDGCVKLWKIT 394
            Y   +K W + 
Sbjct: 1206 Y---LKWWNVA 1213

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 24/313 (7%)
Query: 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS----SPFVKTD 186
           V C    G  H   +  +  T +   + SA +DG +I W   T  K  +     P+V   
Sbjct: 57  VCCRTLQG--HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-- 112
Query: 187 RKSYPPIXXXXXXXXXXXXXSGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDT- 245
             ++ P              S  N S+      ++      TGHK   +      + +T 
Sbjct: 113 ECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETR 172
Query: 246 LYSSSNDRSIKVWNIEDRAYV-----ETLFGHQSAITSLDILAKN-RVISSGGTDKSVRV 299
           L + S D++  +W++     +     E   GH + + SL I + N  +  SG  D +VR+
Sbjct: 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232
Query: 300 WKIQEESQLV--FNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356
           W ++  S+ V  ++GH   I+  +   D Q+F T  +DGT  L+ +      H + V + 
Sbjct: 233 WDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG---HQLQVYNR 289
Query: 357 Y-DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLS--GVINS 413
             D + +E   +TSVA   +  L+ +G  +G   +W       +  L  +  S  G I+ 
Sbjct: 290 EPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISC 349
Query: 414 LVFTSDHKHLVAG 426
           L  +SD   L  G
Sbjct: 350 LGLSSDGSALCTG 362

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 229 GHKAPITGLAISFECDTLYSSSNDRSIKVW--NIEDRAYVETLFGHQSAITSLDILAKNR 286
           GH+  +  +A S   + L S+S D +  +W  N +D   V TL GH++ + S+       
Sbjct: 59  GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN 118
Query: 287 VISSGGTDKSVRVWKIQEESQL----VFNGHSRGI 317
           ++++   DKSV VW++ EE +     V N H++ +
Sbjct: 119 LLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV 153

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 207 SGDNNSNIKLWS-SSLEHLHTFTGHKAPIT--GLAISFECDTLYSSSNDRSIKVWNIEDR 263
           SGD      LW   S + L +F GH A +    LA S   +T  S   D+   VW++   
Sbjct: 173 SGDGT--CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230
Query: 264 AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ--------LVFNGHSR 315
             V+    H+S + S+         +SG  D + R++ ++ + +        ++F   S 
Sbjct: 231 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290
Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
              ++ R+    +     D T+++W +LK      + +  G++      N ++++    +
Sbjct: 291 DFSLSGRLLFAGY----NDYTINVWDVLKG---SRVSILFGHE------NRVSTLRVSPD 337
Query: 376 SDLVASGSYDGCVKLW 391
                SGS+D  +++W
Sbjct: 338 GTAFCSGSWDHTLRVW 353

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 244 DTLYSSSNDRSIKVWNIED-RAYVE-TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301
           +T+ + S D  +KVW   D R  ++ +L GHQ  + S+DI     + +S   D  +R+W 
Sbjct: 49  ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 108
Query: 302 IQEESQL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS 359
           ++   Q+  +  G      +    + Q   T    G ++++ +      +++        
Sbjct: 109 LENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-------- 160
Query: 360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD 419
             +   +I S+A   +   +ASG+ DG + ++ I   + L  L+   +   I SL F+ D
Sbjct: 161 -DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP--IRSLTFSPD 217
Query: 420 HKHLV 424
            + LV
Sbjct: 218 SQLLV 222

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	454
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.98
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.97
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.96
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.96
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.95
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.95
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.95
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.95
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.94
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.94
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.94
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.93
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.93
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.93
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.93
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.93
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.93
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.92
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.92
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.92
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.91
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.91
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.9
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.9
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.9
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.9
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.9
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.89
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.88
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.88
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.88
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.88
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.86
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.86
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.86
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.86
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.85
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.85
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.85
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.84
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.83
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.83
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.83
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.83
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.82
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.82
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.82
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.81
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.8
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.8
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.79
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.78
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.78
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.78
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.77
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.76
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.76
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.75
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.75
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.75
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.74
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.74
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.74
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.73
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.72
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.72
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.72
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.72
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.71
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.71
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.7
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.69
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.69
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.65
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.65
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.65
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.65
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.62
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.61
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.58
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.58
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.58
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.57
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.54
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.54
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.53
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.53
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.52
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.52
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.52
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.52
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.51
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.49
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.49
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.45
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.43
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.42
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.41
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.41
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	99.41
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.36
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	99.36
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.36
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	99.36
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.35
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.35
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.33
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.29
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.22
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.22
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.21
4a2l_A	795	BT_4663, two-component system sensor histidine kin	99.2
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.18
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	99.18
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.14
2ece_A	462	462AA long hypothetical selenium-binding protein;	99.11
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	99.11
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	99.1
2p4o_A	306	Hypothetical protein; putative lactonase, structur	99.1
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	99.1
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	99.05
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	99.05
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.04
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.03
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	99.03
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	99.03
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.02
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	99.01
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	99.0
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	99.0
3v9f_A	781	Two-component system sensor histidine kinase/RESP	99.0
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	99.0
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.99
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.98
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.98
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.98
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.91
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.87
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.81
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.79
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.76
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.72
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.71
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.71
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.67
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.65
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.63
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.63
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.62
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.62
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	98.62
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.61
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.58
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.58
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.58
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.58
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.57
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	98.55
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.53
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.52
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.48
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.46
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	98.46
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.46
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.43
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.38
3kya_A	496	Putative phosphatase; structural genomics, joint c	98.37
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.34
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.3
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	98.29
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	98.28
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	98.25
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.24
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.18
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.18
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	98.15
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	98.15
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	98.13
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	98.13
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.13
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	98.13
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.08
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	98.08
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	98.04
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	98.01
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.98
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.98
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	97.96
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.88
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.85
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.84
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.79
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.77
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.63
3ott_A	758	Two-component system sensor histidine kinase; beta	97.62
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	97.6
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.59
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	97.54
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	97.49
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.49
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.43
3ott_A	758	Two-component system sensor histidine kinase; beta	97.35
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.31
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.27
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	97.27
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	97.25
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	97.15
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.15
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	97.1
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	97.1
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	97.1
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	97.02
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	97.01
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.95
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	96.94
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	96.81
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.8
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	96.79
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	96.65
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	96.55
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	95.23
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.83
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	94.51
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	94.34
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	94.3
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	94.01
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	93.93
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	93.89
1zi0_A	307	DNA gyrase subunit A; beta pinwheel, topoisomerase	92.55
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	91.8
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	90.18
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	89.98
1suu_A	312	DNA gyrase subunit A; topoisomerase,DNA gyrase, be	89.62
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	89.47
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	88.33
3no0_A	276	DNA gyrase subunit A; DNA topology, topoisomerase,	87.86
1wp5_A	323	Topoisomerase IV; broken beta-propeller, hairpin-i	87.57
3uc1_A	327	DNA gyrase subunit A; DNA binding protein, topoiso	86.45
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	86.09
3zwu_A	592	Alkaline phosphatase PHOX; hydrolase, beta-propell	84.38
4hvt_A	711	Ritya.17583.B, post-proline cleaving enzyme; ssgci	83.31
3l6v_A	370	GYRA, DNA gyrase subunit A; gyrase A C-terminal do	81.06
4a9v_A	592	PHOX; hydrolase, beta-propeller; 1.10A {Pseudomona	80.88

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.1e-49  Score=374.23  Aligned_cols=287  Identities=21%  Similarity=0.378  Sum_probs=264.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.++|++++|+|++++|++|+.||.|++||+.++.....+.      +|...|.+++|+|++++|++|+.|
T Consensus       100 ~~~~l~g--h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~------~h~~~V~~v~~~~~~~~l~sgs~D  171 (410)
T 1vyh_C          100 EKYALSG--HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK------GHTDSVQDISFDHSGKLLASCSAD  171 (410)
T ss_dssp             CSCEEEC--CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ceEeecc--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------ccCCcEEEEEEcCCCCEEEEEeCC
Confidence            3456778  99999999999999999999999999999999988766665      688999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      |.|++||+ ....+..+.+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.++|++.+|++
T Consensus       172 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s  251 (410)
T 1vyh_C          172 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS  251 (410)
T ss_dssp             SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence            99999999 66778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC---------------------CCEEEEEeCCCCEEEEecCCCccc
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN---------------------DQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~---------------------~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      |+.|+.|++||+.++... .+.+|...+.++.+.+                     +.+|++|+.|+.|++||+.++.++
T Consensus       252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~  331 (410)
T 1vyh_C          252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL  331 (410)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred             EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence            999999999999988776 7788999999888865                     568999999999999999999888


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ..+..         |..+|++++|+|++++|++|+.||+|++||+.+++.+..+..  |...|++++|+|++.+|+++ +
T Consensus       332 ~~~~~---------h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~sg-s  399 (410)
T 1vyh_C          332 MTLVG---------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--HEHFVTSLDFHKTAPYVVTG-S  399 (410)
T ss_dssp             EEEEC---------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC--CSSCEEEEEECSSSSCEEEE-E
T ss_pred             EEEEC---------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC--CCCcEEEEEEcCCCCEEEEE-e
Confidence            87753         456699999999999999999999999999999988888876  88899999999999999998 8


Q ss_pred             CCCceeeeee
Q psy17902        429 TEHRFGRWKT  438 (454)
Q Consensus       429 ~d~~i~~W~~  438 (454)
                      .|+.|++|+.
T Consensus       400 ~D~~i~vW~~  409 (410)
T 1vyh_C          400 VDQTVKVWEC  409 (410)
T ss_dssp             TTSEEEEEC-
T ss_pred             CCCcEEEEeC
Confidence            9999999985

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=6.4e-48  Score=353.39  Aligned_cols=287  Identities=23%  Similarity=0.329  Sum_probs=258.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....|.+  |.+.|++++|+|++++|++|+.||.|++||+.++.....+.      .|...|.+++|+|++++|++|+.|
T Consensus        47 ~~~~l~g--H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~s~~~d  118 (340)
T 1got_B           47 TRRTLRG--HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP------LRSSWVMTCAYAPSGNYVACGGLD  118 (340)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE------CSSSCEEEEEECTTSSEEEEEETT
T ss_pred             hheeecC--CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee------cCCccEEEEEECCCCCEEEEEeCC
Confidence            5678899  99999999999999999999999999999999888776665      478899999999999999999999


Q ss_pred             CcEEEEeCCC-----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        212 SNIKLWSSSL-----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       212 g~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      +.|++|++..     .....+.+|.+.|.++.|++++ .+++++.|++|++||+.++..+..+.+|...|.+++|+|++.
T Consensus       119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~  197 (340)
T 1got_B          119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR  197 (340)
T ss_dssp             CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC
Confidence            9999999832     3456678999999999999876 589999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +|++|+.|+.|++||++++... .+.+|...+.++.+. ++.+|++++.||.|++||++++..+..+....       +.
T Consensus       198 ~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-------~~  270 (340)
T 1got_B          198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-------II  270 (340)
T ss_dssp             EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-------CC
T ss_pred             EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-------cc
Confidence            9999999999999999998776 788899999887775 57789999999999999999887776654211       23


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      ..|++++|+|+|++|++|+.||.|++||+.++..+..+..  |.++|++++|+|+|.+|+++ +.|+.|++|+
T Consensus       271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~s~dg~~l~s~-s~D~~i~iWd  340 (340)
T 1got_B          271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATG-SWDSFLKIWN  340 (340)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred             cceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeec--CCCcEEEEEEcCCCCEEEEE-cCCccEEecC
Confidence            4599999999999999999999999999999988888876  88999999999999999999 8999999996

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=3.9e-47  Score=349.81  Aligned_cols=289  Identities=18%  Similarity=0.332  Sum_probs=257.9

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ...+.|.+  |.+.|++++|+|++++|++|+.||+|++||..++.....+.      .+...|.+++|+|++.+|++|+.
T Consensus        55 ~~~~~l~g--H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~------~~~~~v~~~~~sp~g~~lasg~~  126 (354)
T 2pbi_B           55 KTRRTLKG--HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT------MPCTWVMACAYAPSGCAIACGGL  126 (354)
T ss_dssp             CEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------CSSSCCCEEEECTTSSEEEEEST
T ss_pred             EEEEEecC--CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe------cCCCCEEEEEECCCCCEEEEeeC
Confidence            35678899  99999999999999999999999999999998887766655      36778999999999999999999


Q ss_pred             CCcEEEEeCCC-------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        211 NSNIKLWSSSL-------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       211 dg~v~vw~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      |+.+++|++..       .....+..|...|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus       127 d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~  206 (354)
T 2pbi_B          127 DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP  206 (354)
T ss_dssp             TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred             CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence            99999999832       34566778999999999999999999999999999999999999999999999999999987


Q ss_pred             --CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        284 --KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       284 --~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                        ++++|++|+.||.|++||++++..+ .+..|...+.++.+. ++..|++++.|++|++||++....+..+....    
T Consensus       207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~----  282 (354)
T 2pbi_B          207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES----  282 (354)
T ss_dssp             CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT----
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC----
Confidence              4689999999999999999998877 778899999888775 57799999999999999999887665554221    


Q ss_pred             CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       360 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                         +...+.+++|+|++.+|++|+.|++|++||+.++..+..+..  |.+.|++++|+|+|++|+++ +.|+.|++|+
T Consensus       283 ---~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~--h~~~v~~l~~spdg~~l~sg-s~D~~v~vW~  354 (354)
T 2pbi_B          283 ---IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG--HENRVSTLRVSPDGTAFCSG-SWDHTLRVWA  354 (354)
T ss_dssp             ---CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEEC
T ss_pred             ---cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC--CCCcEEEEEECCCCCEEEEE-cCCCCEEecC
Confidence               233489999999999999999999999999999988888876  88999999999999999999 8999999995

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.8e-47  Score=345.76  Aligned_cols=289  Identities=16%  Similarity=0.276  Sum_probs=257.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS  207 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  207 (454)
                      ..+.+.+  |.+.|++++|+|+    +.+|++|+.||+|+||++.........    ...+|...|.+++|++++.++++
T Consensus        24 ~~~~~~~--H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~----~l~gh~~~v~~~~~~~~~~~l~s   97 (321)
T 3ow8_A           24 LFKQEQA--HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW----SLEGHQLGVVSVDISHTLPIAAS   97 (321)
T ss_dssp             EEEETTS--SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEE----EECCCSSCEEEEEECSSSSEEEE
T ss_pred             eeeeccc--CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeee----eeccCCCCEEEEEECCCCCEEEE
Confidence            4456667  9999999999985    679999999999999999876533211    12378899999999999999999


Q ss_pred             ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      ++.|+.|++||+ ++..+..+..|...+.+++|+|++++|++|+.||.|++|++.++.....+..|...|.+++|+|+++
T Consensus        98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~  177 (321)
T 3ow8_A           98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK  177 (321)
T ss_dssp             EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS
T ss_pred             EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC
Confidence            999999999999 7778888889999999999999999999999999999999999999988989999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +|++|+.||.|++||+++++.+ .+.+|...+.++.+. ++.+|++++.|+.|++||+.++.....+..         |.
T Consensus       178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------h~  248 (321)
T 3ow8_A          178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG---------HA  248 (321)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC---------CS
T ss_pred             EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC---------CC
Confidence            9999999999999999998877 678888888877765 567899999999999999998887776643         45


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ..|.+++|+|++.+|++|+.||+|++||+.++.++..+..  |.+.|++++|+|++++|+++ +.|+.|++|+.
T Consensus       249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~g~~l~s~-~~d~~i~vwd~  319 (321)
T 3ow8_A          249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSV-GDDQEIHIYDC  319 (321)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTCCEEEEEC
T ss_pred             CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC--CCCcEEEEEECCCCCEEEEE-eCCCeEEEEeC
Confidence            6699999999999999999999999999999999888876  88999999999999999988 89999999985

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.6e-47  Score=345.06  Aligned_cols=287  Identities=19%  Similarity=0.308  Sum_probs=250.7

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..++|.+  |.+.|++++|+|++++|++|+.||.|++||+.++.....+.      .|..+|.+++|+|++++|++|+.|
T Consensus         5 ~~~~~~~--h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~s~d   76 (304)
T 2ynn_A            5 IKKTFSN--RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ------VTETPVRAGKFIARKNWIIVGSDD   76 (304)
T ss_dssp             CEEEEEE--ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred             eEEeecC--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee------ccCCcEEEEEEeCCCCEEEEECCC
Confidence            3567888  99999999999999999999999999999999988776665      578899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeec-CCCEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILA-KNRVI  288 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l  288 (454)
                      +.|++||+ ++..+..+.+|...|.+++|+|++.+|++|+.||+|++||+.++ .....+.+|...|.+++|+| ++.+|
T Consensus        77 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l  156 (304)
T 2ynn_A           77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF  156 (304)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred             CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence            99999999 77888899999999999999999999999999999999999877 45567889999999999999 57899


Q ss_pred             EEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEec---CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRV---NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      ++|+.|+.|++||++.....  ...++...+..+.+.   ++.+|++++.|+.|++||+.++.++..+..         |
T Consensus       157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~---------h  227 (304)
T 2ynn_A          157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---------H  227 (304)
T ss_dssp             EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC---------C
T ss_pred             EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC---------C
Confidence            99999999999999876544  344555677766654   456899999999999999999988888764         4


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC--EEEEEecCCCceeeeeee
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK--HLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~--~l~~~~~~d~~i~~W~~~  439 (454)
                      ...|.+++|+|++.+|++|+.||+|++||+.+++.+..+..  +...+.+++|+|++.  +|+++  .+..+.+|+..
T Consensus       228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~asg--~~~g~~~~~~~  301 (304)
T 2ynn_A          228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIATHPTGRKNYIASG--FDNGFTVLSLG  301 (304)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC--SSSSEEEEEECTTCGGGCEEEE--ETTEEEEEECC
T ss_pred             CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC--CCccEEEEEECCCCCceEEEEe--cCCceEEEEec
Confidence            45599999999999999999999999999999999988876  778899999999986  35544  45556677654

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=9.1e-47  Score=351.07  Aligned_cols=300  Identities=23%  Similarity=0.356  Sum_probs=258.6

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ...+.|.|  |.+.|++++|+|++++|++|+.||+|+|||+.++.....+.      .|...|.+++|+|++++|++|+.
T Consensus        57 ~~~~~l~g--H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~------~h~~~v~~~~~s~~g~~las~~~  128 (380)
T 3iz6_a           57 VCCRTLQG--HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK------LHCPWVMECAFAPNGQSVACGGL  128 (380)
T ss_dssp             EEEEEECC--CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE------CCCTTCCCCEECTTSSEEEECCS
T ss_pred             EEeecccc--cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe------cCCCCEEEEEECCCCCEEEEeeC
Confidence            46788999  99999999999999999999999999999999988776665      58889999999999999999999


Q ss_pred             CCcEEEEeCCC--------ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEe-----eccCCce
Q psy17902        211 NSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETL-----FGHQSAI  276 (454)
Q Consensus       211 dg~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v  276 (454)
                      |+.|++|++..        .....+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+     .+|...|
T Consensus       129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v  208 (380)
T 3iz6_a          129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV  208 (380)
T ss_dssp             SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred             CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence            99999999832        234567899999999999996 457999999999999999999988776     5799999


Q ss_pred             eEEEeec-CCCEEEEeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        277 TSLDILA-KNRVISSGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       277 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .+++|++ ++++|++|+.|+.|++||++.. ..+ .+.+|...|.++.+. ++.+|++++.||+|++||++++..+..+.
T Consensus       209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~  288 (380)
T 3iz6_a          209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN  288 (380)
T ss_dssp             EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred             EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence            9999987 7899999999999999999843 333 788899999887765 56799999999999999999998887765


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc--CCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD--IPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      ......  ..+...|++++|+|+|++|++|+.||.|++||+..++.+..+..  ..|.+.|++++|+|+|.+|+++ +.|
T Consensus       289 ~~~~~~--~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~D  365 (380)
T 3iz6_a          289 REPDRN--DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG-SWD  365 (380)
T ss_dssp             CCCSSS--CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE-CTT
T ss_pred             cccccc--ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe-eCC
Confidence            433211  12334589999999999999999999999999998887776632  2488999999999999999998 899


Q ss_pred             CceeeeeeeCC
Q psy17902        431 HRFGRWKTIKG  441 (454)
Q Consensus       431 ~~i~~W~~~~~  441 (454)
                      +.|++|+....
T Consensus       366 ~~i~iW~~~~~  376 (380)
T 3iz6_a          366 KNLKIWAFSGH  376 (380)
T ss_dssp             SCEEEEECCSS
T ss_pred             CCEEEEecCCC
Confidence            99999998654

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=6.5e-45  Score=329.62  Aligned_cols=295  Identities=18%  Similarity=0.303  Sum_probs=256.3

Q ss_pred             cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902        128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS  207 (454)
Q Consensus       128 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  207 (454)
                      +.......+.+  |.+.|++++|+|++++|++|+.||.|++|++.++.....+.      +|...|.+++|+|++++|++
T Consensus        11 ~~~~~~~~~~g--h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s   82 (312)
T 4ery_A           11 PNYALKFTLAG--HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDSNLLVS   82 (312)
T ss_dssp             CCCEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEE
T ss_pred             CCceeEEEEcc--cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc------cCCCceEEEEEcCCCCEEEE
Confidence            33446677888  99999999999999999999999999999999887766655      68889999999999999999


Q ss_pred             ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      |+.||.|++||+ ++..+..+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|..+|.+++|+|+++
T Consensus        83 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  162 (312)
T 4ery_A           83 ASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS  162 (312)
T ss_dssp             EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred             ECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC
Confidence            999999999999 7778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEE--EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLV--FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      +|++++.||.|++||++++..+.  ...+...+..+.+. ++.+|++++.||.|++||+.+++.+..+..+...      
T Consensus       163 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------  236 (312)
T 4ery_A          163 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE------  236 (312)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS------
T ss_pred             EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc------
Confidence            99999999999999999987762  23455567766655 5778999999999999999999887776543321      


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe-cCCCceeeeee
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI-GTEHRFGRWKT  438 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~-~~d~~i~~W~~  438 (454)
                      ...+......+++.+|++|+.||.|++||+.++..+..+..  |...|.+++|+|++.+|++++ +.|+.|++|+.
T Consensus       237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~  310 (312)
T 4ery_A          237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG--HTDVVISTACHPTENIIASAALENDKTIKLWKS  310 (312)
T ss_dssp             SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred             eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc--cCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence            11133333446788999999999999999999999888886  888999999999999999884 37999999985

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=5.3e-46  Score=342.50  Aligned_cols=287  Identities=17%  Similarity=0.220  Sum_probs=234.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        141 HRASITCIAVTSDSKHVYSACK------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      |...|++++|||||++||+|+.      ||.|++|+..++.....+...  ...|...|.+++|+|++.+| +++.||.|
T Consensus        41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~--~~~~~~~V~~~~~s~d~~~l-~~s~dg~v  117 (357)
T 4g56_B           41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTA--GVQTEAGVTDVAWVSEKGIL-VASDSGAV  117 (357)
T ss_dssp             CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSE--EEECSSCEEEEEEETTTEEE-EEETTSCE
T ss_pred             ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecc--cCCCCCCEEEEEEcCCCCEE-EEECCCEE
Confidence            9999999999999999999997      788999998776544433221  12477789999999998655 56779999


Q ss_pred             EEEeC-CCccE----EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEE
Q psy17902        215 KLWSS-SLEHL----HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVI  288 (454)
Q Consensus       215 ~vw~~-~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l  288 (454)
                      +|||+ +++..    ....+|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ .++
T Consensus       118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~  197 (357)
T 4g56_B          118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF  197 (357)
T ss_dssp             EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred             EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence            99998 33332    2345799999999999999999999999999999999999999999999999999999987 478


Q ss_pred             EEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      ++++.|+.|++||+++++..   ....+...+.++.+.+  +.+|++|+.|+.|++||+++++++..+..         |
T Consensus       198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~---------~  268 (357)
T 4g56_B          198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV---------H  268 (357)
T ss_dssp             EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC---------C
T ss_pred             eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec---------c
Confidence            99999999999999988766   3345566677777754  45788999999999999999988887754         3


Q ss_pred             CCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC-CCCEEEEEecCCCceeeeeeeCC
Q psy17902        364 PNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS-DHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       364 ~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ...|++++|+|++ ++||+|+.||+|+|||+.+++.+..+.   |.+.|++|+|+| ++.+|+++ |.|+.|++|++...
T Consensus       269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~---H~~~V~~vafsP~d~~~l~s~-s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS---HRDFVTGVAWSPLDHSKFTTV-GWDHKVLHHHLPSE  344 (357)
T ss_dssp             SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC---CSSCEEEEEECSSSTTEEEEE-ETTSCEEEEECC--
T ss_pred             ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC---CCCCEEEEEEeCCCCCEEEEE-cCCCeEEEEECCCC
Confidence            4559999999987 589999999999999999988776653   889999999998 78899888 89999999998654


Q ss_pred             Ce
Q psy17902        442 VK  443 (454)
Q Consensus       442 ~~  443 (454)
                      .+
T Consensus       345 ~~  346 (357)
T 4g56_B          345 GR  346 (357)
T ss_dssp             --
T ss_pred             Cc
Confidence            33

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.1e-46  Score=342.50  Aligned_cols=287  Identities=14%  Similarity=0.159  Sum_probs=229.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-----ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK-----VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK  215 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~  215 (454)
                      |...|.+++|+|||++|++++ |+++++||......     ............+...|.+++|+|++ .|++|+.||.|+
T Consensus        29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~  106 (344)
T 4gqb_B           29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE  106 (344)
T ss_dssp             CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred             ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE
Confidence            778899999999999999887 67778886321100     00000000011245679999999986 678999999999


Q ss_pred             EEeC-CCccEE----eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEE
Q psy17902        216 LWSS-SLEHLH----TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVIS  289 (454)
Q Consensus       216 vw~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~  289 (454)
                      |||+ +++.+.    .+.+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|...|++++|+|++ .+|+
T Consensus       107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~  186 (344)
T 4gqb_B          107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFL  186 (344)
T ss_dssp             EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEE
T ss_pred             EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCcee
Confidence            9999 444433    345899999999999999999999999999999999999999999999999999999988 5789


Q ss_pred             EeeCCCcEEEeeccCCeEEE-E--ccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        290 SGGTDKSVRVWKIQEESQLV-F--NGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~~-~--~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +++.|++|++||+++++... +  ..+...+.++.+.+  +.+|++|+.||.|++||+++++++..+..         |.
T Consensus       187 s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~---------h~  257 (344)
T 4gqb_B          187 SCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV---------HS  257 (344)
T ss_dssp             EEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC---------CS
T ss_pred             eeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC---------CC
Confidence            99999999999999987763 2  33445566666653  45788999999999999999999888764         45


Q ss_pred             CcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        365 NWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       365 ~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ..|++++|+|++ ++|++|+.||+|+|||+.+++.+. +..  |.+.|++++|+|+++.|++++|.|+.|++|++...
T Consensus       258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~--H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA--HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC--CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred             CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC--CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence            559999999998 589999999999999999887654 333  88999999999999876665589999999998654

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=6.1e-45  Score=330.39  Aligned_cols=295  Identities=22%  Similarity=0.411  Sum_probs=250.7

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ....+|.|  |.+.|++++|+|++ ++|++|+.||+|++|++......... ......+|...|.+++|+|++.+|++|+
T Consensus         8 ~l~~~l~g--H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~s   84 (319)
T 3frx_A            8 VLRGTLEG--HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGV-PVRSFKGHSHIVQDCTLTADGAYALSAS   84 (319)
T ss_dssp             EEEEEECC--CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEE-EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEEEcc--ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccc-cceEEeCCcccEEEEEECCCCCEEEEEe
Confidence            35677889  99999999999965 89999999999999998653221100 0111236889999999999999999999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC----
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK----  284 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----  284 (454)
                      .|+.|++||+ ++..+..+.+|...|.+++|+|++.+|++|+.|++|++||+. +.++..+.+|...|.++.|+|.    
T Consensus        85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~  163 (319)
T 3frx_A           85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD  163 (319)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred             CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC
Confidence            9999999999 777888999999999999999999999999999999999997 5567788899999999999985    


Q ss_pred             --CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        285 --NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       285 --~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                        +.+|++++.|+.|++||+++.... .+.+|...+.++.+. ++.+|++++.||.|++||+.+++.+..+..       
T Consensus       164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------  236 (319)
T 3frx_A          164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-------  236 (319)
T ss_dssp             --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-------
T ss_pred             CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------
Confidence              448999999999999999988776 778899999888776 567899999999999999999988887763       


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC------CCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------PLSGVINSLVFTSDHKHLVAGIGTEHRFG  434 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~  434 (454)
                         ...|.+++|+|++.+|++++.+ .+++|++..+..+..+...      .+...+.+++|+|||++|+++ +.|+.|+
T Consensus       237 ---~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~Dg~i~  311 (319)
T 3frx_A          237 ---QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTDNVIR  311 (319)
T ss_dssp             ---CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETTSCEE
T ss_pred             ---CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ecCceEE
Confidence               2339999999999999988865 4999999887666555421      245678999999999999998 8999999


Q ss_pred             eeeeeCC
Q psy17902        435 RWKTIKG  441 (454)
Q Consensus       435 ~W~~~~~  441 (454)
                      +|++.++
T Consensus       312 vWd~~t~  318 (319)
T 3frx_A          312 VWQVMTA  318 (319)
T ss_dssp             EEEEEEC
T ss_pred             EEEEeec
Confidence            9998653

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=334.83  Aligned_cols=306  Identities=17%  Similarity=0.264  Sum_probs=244.8

Q ss_pred             eEeEeccCCCCC-CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRA-SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~-~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ....+.+  |.. .|.+++|+|++++||+|+.||.|+||++.++.......   ...+|...|.+++|+|++++|++|+.
T Consensus         7 ~~~~~~~--h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~---~~~~h~~~v~~~~~sp~g~~l~s~s~   81 (345)
T 3fm0_A            7 LLGRVPA--HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV---LSEGHQRTVRKVAWSPCGNYLASASF   81 (345)
T ss_dssp             EEEEECC--STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE---ECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred             EeeeecC--CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee---eccccCCcEEEEEECCCCCEEEEEEC
Confidence            5677888  988 99999999999999999999999999998765332111   11268889999999999999999999


Q ss_pred             CCcEEEEeCCC---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---eeEEEeeccCCceeEEEeecC
Q psy17902        211 NSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       211 dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      |+.|++|++..   ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.++   .++..+.+|...|.+++|+|+
T Consensus        82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~  161 (345)
T 3fm0_A           82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS  161 (345)
T ss_dssp             TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred             CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence            99999999843   356788999999999999999999999999999999999875   345677889999999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC----
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG----  356 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~----  356 (454)
                      +.+|++++.|+.|++||+..+...   .+.+|...|.++.+. ++.+|++++.|++|++|+.........+.....    
T Consensus       162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~  241 (345)
T 3fm0_A          162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW  241 (345)
T ss_dssp             SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred             CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence            999999999999999999887533   678899999888776 567899999999999999743221111000000    


Q ss_pred             ---CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----eeEe---ccCCCceeeeEEEEcCCCC-EEEE
Q psy17902        357 ---YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LEFL---QDIPLSGVINSLVFTSDHK-HLVA  425 (454)
Q Consensus       357 ---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~---~~~~~~~~v~~l~~s~d~~-~l~~  425 (454)
                         ......|...|.+++|+|++.+|++++.|+.|++|+...+..    ...+   ....|...|++++|+|++. +|++
T Consensus       242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS  321 (345)
T 3fm0_A          242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS  321 (345)
T ss_dssp             EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred             ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence               000012566699999999999999999999999999876521    1111   1124788999999999985 7777


Q ss_pred             EecCCCceeeeeeeCCCe
Q psy17902        426 GIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       426 ~~~~d~~i~~W~~~~~~~  443 (454)
                      + +.|+.|++|+.....+
T Consensus       322 ~-s~Dg~v~~W~~~~~~~  338 (345)
T 3fm0_A          322 C-SDDGEVAFWKYQRPEG  338 (345)
T ss_dssp             E-ETTSCEEEEEECC---
T ss_pred             c-CCCCcEEEEEecCCCC
Confidence            7 8999999999876543

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.7e-44  Score=325.65  Aligned_cols=290  Identities=18%  Similarity=0.288  Sum_probs=230.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ....|.+  |.+.|++++|+|+  +|++|+.||.|++|++..+.  ....+.    ...|...|.+++|+|++++|++|+
T Consensus         6 ~~~~~~~--h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~----~~~h~~~v~~v~~sp~~~~las~s   77 (330)
T 2hes_X            6 LIKSLKL--YKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD----ETAHKKAIRSVAWRPHTSLLAAGS   77 (330)
T ss_dssp             EEEEEEC--CSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC----TTCCCSCEEEEEECTTSSEEEEEE
T ss_pred             cceeecc--CCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe----cCCccCCEEEEEECCCCCEEEEEe
Confidence            4677888  9999999999997  99999999999999998753  222221    113888999999999999999999


Q ss_pred             CCCcEEEEeCC--------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC----ceeEEEeeccCCcee
Q psy17902        210 NNSNIKLWSSS--------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED----RAYVETLFGHQSAIT  277 (454)
Q Consensus       210 ~dg~v~vw~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~  277 (454)
                      .|+.|+||++.        ...+..+.+|...|.+++|+|++++|++|+.|++|++||+..    .+++..+.+|...|.
T Consensus        78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~  157 (330)
T 2hes_X           78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK  157 (330)
T ss_dssp             TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred             CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence            99999999982        235667889999999999999999999999999999999943    256777889999999


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccCC--eEE-EEccccCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCcc----
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQEE--SQL-VFNGHSRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVP----  347 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~-~~~~~~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~----  347 (454)
                      +++|+|++.+|++++.|++|++||+..+  .++ .+.+|...+.++.+.+.   ..|++++.|++|++||+..+..    
T Consensus       158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~  237 (330)
T 2hes_X          158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ  237 (330)
T ss_dssp             EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred             EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence            9999999999999999999999999876  333 77889999988888753   5799999999999999865421    


Q ss_pred             ----ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc--eeeEeccCCCce-eeeEEEEcC--
Q psy17902        348 ----THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR--TLEFLQDIPLSG-VINSLVFTS--  418 (454)
Q Consensus       348 ----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~-~v~~l~~s~--  418 (454)
                          ...+.        ..|...|.+++|++++ +|++++.||+|++|+..++.  .+.... ..|.. .|++++|+|  
T Consensus       238 ~~~~~~~~~--------~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~-~~h~~~~v~~v~~~~~~  307 (330)
T 2hes_X          238 EWVCEAILP--------DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRA-LCHGVYEINVVKWLELN  307 (330)
T ss_dssp             EEEEEEECC--------SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEES-CTTTTSCEEEEEEC---
T ss_pred             eeEEeeecc--------cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccc-cccccceEEEEEEecCC
Confidence                11111        1256669999999765 89999999999999998763  222221 23655 899999999  


Q ss_pred             CCCEEEEEecCCCceeeeeeeC
Q psy17902        419 DHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ++++|+++ +.|+.|++|+...
T Consensus       308 ~~~~las~-s~Dg~v~~W~~~~  328 (330)
T 2hes_X          308 GKTILATG-GDDGIVNFWSLEK  328 (330)
T ss_dssp             --CCEEEE-ETTSEEEEEEC--
T ss_pred             CceEEEEe-cCCCcEEEEEecc
Confidence            68888888 8999999999754

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.2e-43  Score=325.37  Aligned_cols=295  Identities=21%  Similarity=0.288  Sum_probs=240.6

Q ss_pred             eEeEeccCCCCCCeEEEEE-----cC-CCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCCCCCCceEEEEEeCCCcE
Q psy17902        132 VCTKFNGKPHRASITCIAV-----TS-DSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDRKSYPPILALAVANNNEL  204 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~-----s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~  204 (454)
                      ....|.|  |.+.|++++|     ++ ++++|++|+.||+|++||+......... .......+|...|.+++|+|++.+
T Consensus        13 ~~~~l~g--H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~   90 (343)
T 2xzm_R           13 KRGILEG--HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF   90 (343)
T ss_dssp             EEEEEEC--CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred             eeeeecc--chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence            5677889  9999999999     76 8999999999999999999764321110 011122368899999999999999


Q ss_pred             EEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee---ccCCceeEEE
Q psy17902        205 VASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF---GHQSAITSLD  280 (454)
Q Consensus       205 l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~  280 (454)
                      |++|+.|+.|++||+ ++..+..+.+|...|.+++|+|++++|++++.|+.|++||+.... .....   +|...|.+++
T Consensus        91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~  169 (343)
T 2xzm_R           91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVR  169 (343)
T ss_dssp             EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEE
T ss_pred             EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeee
Confidence            999999999999999 677888999999999999999999999999999999999998433 33333   6889999999


Q ss_pred             eecCC----------CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCC-Cccc
Q psy17902        281 ILAKN----------RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILK-KVPT  348 (454)
Q Consensus       281 ~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~  348 (454)
                      |+|++          .+|++++.|+.|++||........+.+|...+.++.+. ++.+|++++.||.|++||+.. ..+.
T Consensus       170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~  249 (343)
T 2xzm_R          170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ  249 (343)
T ss_dssp             ECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred             eccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence            99987          78999999999999996554444788899999888775 567899999999999999944 3344


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee--Eecc---------CCCceeeeEEEEc
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE--FLQD---------IPLSGVINSLVFT  417 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~---------~~~~~~v~~l~~s  417 (454)
                      ..+..          ...|.+++|+|++.+|+++ .|+.|++|++.++....  .+..         ..|...|++++|+
T Consensus       250 ~~~~~----------~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s  318 (343)
T 2xzm_R          250 REFDA----------GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN  318 (343)
T ss_dssp             EEEEC----------SSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred             eeecC----------CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence            43321          2239999999999888765 57789999998775443  3321         1366789999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      |+|++|+++ +.|+.|++|+..++
T Consensus       319 p~g~~l~sg-~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          319 ALGKKLFAG-FTDGVIRTFSFETS  341 (343)
T ss_dssp             SSSCCEEEE-ETTSEEEEEEEEEE
T ss_pred             CCCCeEEEe-cCCceEEEEEEEcc
Confidence            999999998 89999999998654

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=6.9e-43  Score=326.40  Aligned_cols=296  Identities=19%  Similarity=0.342  Sum_probs=241.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccC------------CCCCCceEEEEEeCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD------------RKSYPPILALAVANNNELVASG  208 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~l~~~  208 (454)
                      |.+.|+|++|+|+|++||+|+ ++.+++|++.++.....+......            ..+...|.+++|+|++++|++|
T Consensus        63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~  141 (393)
T 1erj_A           63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG  141 (393)
T ss_dssp             CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred             CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence            999999999999999999987 689999999988776554321100            0122359999999999999999


Q ss_pred             cCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CCC
Q psy17902        209 DNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KNR  286 (454)
Q Consensus       209 ~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~  286 (454)
                      +.|+.|++||+ ++..+..+.+|...|.+++|+|++.+|++++.|++|++||+.++++...+. +...+.+++|+| ++.
T Consensus       142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~  220 (393)
T 1erj_A          142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK  220 (393)
T ss_dssp             ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred             cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence            99999999999 667778899999999999999999999999999999999999998887765 667899999999 889


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EE-------ccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC-
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VF-------NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG-  356 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~-------~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-  356 (454)
                      +|++|+.|+.|++||++++..+ .+       .+|...+.++.+. ++.+|++++.|+.|++||+.+............ 
T Consensus       221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~  300 (393)
T 1erj_A          221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG  300 (393)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred             EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence            9999999999999999988766 22       4678888887776 567899999999999999976533211110000 


Q ss_pred             --CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC------CCCEEEEEec
Q psy17902        357 --YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS------DHKHLVAGIG  428 (454)
Q Consensus       357 --~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~------d~~~l~~~~~  428 (454)
                        ......|...|.+++|+|++.+|++|+.||.|++||+.++..+..+..  |.+.|.+++|++      ++.+|+++ +
T Consensus       301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~p~~~~l~sg-s  377 (393)
T 1erj_A          301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--HRNSVISVAVANGSSLGPEYNVFATG-S  377 (393)
T ss_dssp             CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSCTTCTTCEEEEEE-E
T ss_pred             cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC--CCCCEEEEEecCCcCcCCCCCEEEEE-C
Confidence              000113566799999999999999999999999999999999888886  888999999986      67788888 8


Q ss_pred             CCCceeeeeeeCC
Q psy17902        429 TEHRFGRWKTIKG  441 (454)
Q Consensus       429 ~d~~i~~W~~~~~  441 (454)
                      .|+.|++|+....
T Consensus       378 ~Dg~i~iW~~~~~  390 (393)
T 1erj_A          378 GDCKARIWKYKKI  390 (393)
T ss_dssp             TTSEEEEEEEEEC
T ss_pred             CCCcEEECccccc
Confidence            9999999997643

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3.8e-43  Score=346.71  Aligned_cols=293  Identities=16%  Similarity=0.227  Sum_probs=238.4

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ...+.+  |...|++++|+|++. +|++|+.|++|++||..+++....+.      +|...|.+++|+|++++|++|+.|
T Consensus       140 ~~~l~g--h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~------~H~~~V~~v~fspdg~~las~s~D  211 (611)
T 1nr0_A          140 NGNLTG--QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG------EHTKFVHSVRYNPDGSLFASTGGD  211 (611)
T ss_dssp             CBCCCC--CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred             cceecC--CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec------cccCceEEEEECCCCCEEEEEECC
Confidence            345778  999999999999987 69999999999999988776665554      688999999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE----------------
Q psy17902        212 SNIKLWSS-SLEHLHTFT-------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE----------------  267 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----------------  267 (454)
                      +.|++||+ ++..+..+.       +|.+.|.+++|+|++++|++++.|++|++||+.+++++.                
T Consensus       212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~  291 (611)
T 1nr0_A          212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII  291 (611)
T ss_dssp             SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred             CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence            99999998 666776663       799999999999999999999999999999998876543                


Q ss_pred             ---------------------------EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--cccc----
Q psy17902        268 ---------------------------TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHS----  314 (454)
Q Consensus       268 ---------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~----  314 (454)
                                                 .+.+|...|++++|+|++++|++++.|+.|++||+.++.....  ..|.    
T Consensus       292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~  371 (611)
T 1nr0_A          292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT  371 (611)
T ss_dssp             ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred             EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence                                       3347899999999999999999999999999999987654321  1111    


Q ss_pred             -----------------------------------------------------------------------------CCe
Q psy17902        315 -----------------------------------------------------------------------------RGI  317 (454)
Q Consensus       315 -----------------------------------------------------------------------------~~i  317 (454)
                                                                                                   ..+
T Consensus       372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v  451 (611)
T 1nr0_A          372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS  451 (611)
T ss_dssp             EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCE
T ss_pred             EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCc
Confidence                                                                                         122


Q ss_pred             EEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-
Q psy17902        318 DMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-  395 (454)
Q Consensus       318 ~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-  395 (454)
                      .++.+ +++.+|++|+.|+.|++||+..+........        .|...|++++|+|+|++|++++.|++|++|++.+ 
T Consensus       452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~--------~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~  523 (611)
T 1nr0_A          452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTI--------VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN  523 (611)
T ss_dssp             EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEE--------ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred             eEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeecc--------CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC
Confidence            33333 4567888899999999999876543211111        1456699999999999999999999999999987 


Q ss_pred             CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        396 KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       396 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++.+.......|...|++++|+|||++|+++ +.|+.|++|+...+.
T Consensus       524 ~~~~~~~~~~~H~~~V~~v~fspdg~~lasg-s~D~~v~lW~~~~~~  569 (611)
T 1nr0_A          524 FELAHTNSWTFHTAKVACVSWSPDNVRLATG-SLDNSVIVWNMNKPS  569 (611)
T ss_dssp             TEESCCCCCCCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCTT
T ss_pred             CceeeeeeeeecccceeEEEECCCCCEEEEE-ECCCcEEEEECCCcc
Confidence            4444331111388999999999999999998 899999999986543

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1e-41  Score=312.43  Aligned_cols=298  Identities=21%  Similarity=0.343  Sum_probs=248.8

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ....+|+|  |.+.|++|+|+|+ +++|+||+.||+|+|||+.+........ .....+|...|.+++|+|++++|++|+
T Consensus        29 ~l~~tL~G--H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~  105 (340)
T 4aow_A           29 TLRGTLKG--HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGS  105 (340)
T ss_dssp             EEEEEECC--CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             EEEEEECC--ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence            35567999  9999999999997 6899999999999999998754322111 112236889999999999999999999


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE-EEeeccCCceeEEEeecCC--
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV-ETLFGHQSAITSLDILAKN--  285 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~--  285 (454)
                      .|+.|++|+. ..........+...+..+.+++++.+|++++.|+.+++||+...... ....+|...+.+++|++++  
T Consensus       106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  185 (340)
T 4aow_A          106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN  185 (340)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred             ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence            9999999999 66666677788889999999999999999999999999999766543 3456799999999998765  


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      .++++++.|+.|++||++++... .+.+|...|.++.+. ++.+|++++.||.|++||+.+..++..+..          
T Consensus       186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~----------  255 (340)
T 4aow_A          186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG----------  255 (340)
T ss_dssp             CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC----------
T ss_pred             cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC----------
Confidence            57889999999999999998877 778899999888765 567899999999999999999988887763          


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc-------CCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD-------IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW  436 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W  436 (454)
                      ...+.++.|+|++.++ +++.|+.|++||+.++..+..+..       ..|...|++++|+|||++|+++ +.|+.|++|
T Consensus       256 ~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~Dg~v~iW  333 (340)
T 4aow_A          256 GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG-YTDNLVRVW  333 (340)
T ss_dssp             SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred             CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE-eCCCEEEEE
Confidence            2349999999988655 555699999999998766655542       2367889999999999999998 899999999


Q ss_pred             eeeCCCe
Q psy17902        437 KTIKGVK  443 (454)
Q Consensus       437 ~~~~~~~  443 (454)
                      ++.+|.+
T Consensus       334 ~~~tGtr  340 (340)
T 4aow_A          334 QVTIGTR  340 (340)
T ss_dssp             EEEC---
T ss_pred             eCCCcCC
Confidence            9988764

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=3.7e-42  Score=338.43  Aligned_cols=282  Identities=23%  Similarity=0.428  Sum_probs=251.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |...|.+++|+|++++|++++.||.|++||+..... ..+.      .|...|.+++|+|++++|++|+.+
T Consensus       295 ~~~~~~~--h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~-~~~~------~~~~~v~~~~~s~~g~~l~~~~~d  365 (577)
T 2ymu_A          295 LLQTLTG--HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL-QTLT------GHSSSVWGVAFSPDGQTIASASDD  365 (577)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE-EEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEEec--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee-EEEe------CCCCCEEEEEECCCCCEEEEEeCC
Confidence            4567788  999999999999999999999999999999875443 2332      578899999999999999999999


Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      |.|++|+.++..+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|+++
T Consensus       366 g~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~  444 (577)
T 2ymu_A          366 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASA  444 (577)
T ss_dssp             SEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             CEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence            9999999988999999999999999999999999999999999999996 467788889999999999999999999999


Q ss_pred             eCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      +.|+.|++||+.......+.+|...+.++.+. ++.+|++++.|+.|++||. +++.+..+..         |...|+++
T Consensus       445 ~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~---------h~~~v~~l  514 (577)
T 2ymu_A          445 SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG---------HSSSVRGV  514 (577)
T ss_dssp             ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC---------CSSCEEEE
T ss_pred             cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC---------CCCCEEEE
Confidence            99999999998766556888999999887765 5678999999999999995 5666666653         45559999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +|+|++++|++++.||.|++||. +++.+..+..  |.+.|++++|+|||++|+++ |.|+.|++||
T Consensus       515 ~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~--h~~~v~~~~fs~dg~~l~s~-~~D~~i~~Wd  577 (577)
T 2ymu_A          515 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDGQTIASA-SSDKTVKLWN  577 (577)
T ss_dssp             EECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred             EEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC--CCCCEEEEEEcCCCCEEEEE-eCCCEEEEeC
Confidence            99999999999999999999996 5778888876  88999999999999999988 8999999997

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=3.6e-41  Score=308.17  Aligned_cols=283  Identities=17%  Similarity=0.275  Sum_probs=245.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |.+.|++++|+|++++|++++ ||.|++|++.+......+... ....|...|.+++|+|++++|++++.||.|++|++.
T Consensus        50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~  127 (337)
T 1gxr_A           50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL-DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA  127 (337)
T ss_dssp             CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE-ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred             CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecc-cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence            999999999999999999999 999999999876543332211 112477899999999999999999999999999993


Q ss_pred             -Cc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        221 -LE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       221 -~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                       ..  ....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|
T Consensus       128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i  207 (337)
T 1gxr_A          128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV  207 (337)
T ss_dssp             CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcE
Confidence             33  456778899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        298 RVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       298 ~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      ++||++++.......+...+..+.+. ++..+++++.++.|++||+.+..... +.         .|...|.+++|+|++
T Consensus       208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~---------~~~~~v~~~~~~~~~  277 (337)
T 1gxr_A          208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH---------LHESCVLSLKFAYCG  277 (337)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC---------CCSSCEEEEEECTTS
T ss_pred             EEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec---------CCccceeEEEECCCC
Confidence            99999999888666677777777664 67789999999999999998876432 21         245669999999999


Q ss_pred             CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++|++++.||.|++|++.+++.+....   +...|++++|+|++++|+++ +.|+.|++|++.
T Consensus       278 ~~l~~~~~dg~i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~  336 (337)
T 1gxr_A          278 KWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTG-SGDKKATVYEVI  336 (337)
T ss_dssp             SEEEEEETTSEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEEEEE-ETTSCEEEEEEE
T ss_pred             CEEEEecCCCcEEEEECCCCeEEEEec---CCCcEEEEEECCCCCEEEEe-cCCCeEEEEEEe
Confidence            999999999999999999988775543   67889999999999999998 799999999864

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.1e-41  Score=317.67  Aligned_cols=298  Identities=12%  Similarity=0.133  Sum_probs=249.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~  209 (454)
                      ....+.+  |.+.|++++|+|++ ++|++|+.||.|++||+.++.....+..    .+|...|.+++|+| ++.+|++++
T Consensus        65 ~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~  138 (383)
T 3ei3_B           65 LHRTASP--FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG----MGPGDAITGMKFNQFNTNQLFVSS  138 (383)
T ss_dssp             EEEEECC--CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC----CSTTCBEEEEEEETTEEEEEEEEE
T ss_pred             eEEeccC--CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec----CCcCCceeEEEeCCCCCCEEEEEe
Confidence            4557778  99999999999998 9999999999999999998776554431    25888999999999 789999999


Q ss_pred             CCCcEEEEeCCCccEEeeccc---CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        210 NNSNIKLWSSSLEHLHTFTGH---KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       210 ~dg~v~vw~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      .|+.|++||+.+..+..+..|   ...|.+++|+|++++|++|+.||.|++||+ ++..+..+.+|...|.+++|+|++.
T Consensus       139 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~  217 (383)
T 3ei3_B          139 IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD  217 (383)
T ss_dssp             TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred             CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence            999999999977777776554   488999999999999999999999999999 5778888899999999999999998


Q ss_pred             -EEEEeeCCCcEEEeeccC----CeEEEEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        287 -VISSGGTDKSVRVWKIQE----ESQLVFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       287 -~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                       +|++++.|+.|++||+++    ...+....|...+.++.+.+  +.+|++++.|+.|++||+.++.....+........
T Consensus       218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  297 (383)
T 3ei3_B          218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF  297 (383)
T ss_dssp             TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred             CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence             999999999999999998    55665557888998888764  67899999999999999999887776653321100


Q ss_pred             C--------CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        360 S--------SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       360 ~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                      .        -.....+..++|+|++.+  +|+.||.|++||+.+++.+..+....+.+.+..++|+|++++|+++ + |+
T Consensus       298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s-d~  373 (383)
T 3ei3_B          298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M-GF  373 (383)
T ss_dssp             TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E-TT
T ss_pred             ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c-CC
Confidence            0        001123556777777777  8889999999999999999988875567788888999999999988 5 89


Q ss_pred             ceeeeeeeC
Q psy17902        432 RFGRWKTIK  440 (454)
Q Consensus       432 ~i~~W~~~~  440 (454)
                      .|++|+...
T Consensus       374 ~i~iw~~~~  382 (383)
T 3ei3_B          374 NILIWNRED  382 (383)
T ss_dssp             EEEEEECC-
T ss_pred             cEEEEecCC
Confidence            999999753

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=2.1e-42  Score=319.10  Aligned_cols=302  Identities=15%  Similarity=0.202  Sum_probs=249.7

Q ss_pred             ccCceeEeEeccCCCCCCeEEEEEcCCCCEE-EEEeC---CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-
Q psy17902        127 ANATVVCTKFNGKPHRASITCIAVTSDSKHV-YSACK---DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-  201 (454)
Q Consensus       127 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l-~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  201 (454)
                      ..+......+.+  |...|++++|+|++..+ ++|+.   ||.|++|++.++........     .|...|.+++|+|+ 
T Consensus         5 ~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~   77 (357)
T 3i2n_A            5 EKPQIIAHIQKG--FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-----EKAKPIKCGTFGATS   77 (357)
T ss_dssp             CCCCEEEEEEEE--CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-----EESSCEEEEECTTCC
T ss_pred             ChhHHhhhhccC--CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-----cccCcEEEEEEcCCC
Confidence            345566677788  99999999999998655 55655   89999999998776543332     47789999999998 


Q ss_pred             --CcEEEEecCCCcEEEEeC-CCc-cEEeecccCCCeEEEEE------cCCCCEEEEEeCCCcEEEEeCCCce-eEEEee
Q psy17902        202 --NELVASGDNNSNIKLWSS-SLE-HLHTFTGHKAPITGLAI------SFECDTLYSSSNDRSIKVWNIEDRA-YVETLF  270 (454)
Q Consensus       202 --~~~l~~~~~dg~v~vw~~-~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~  270 (454)
                        +.+|++|+.||.|++|++ ... .+..+.+|...|.++.|      +|++++|++++.||.|++||+.++. .+..+.
T Consensus        78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~  157 (357)
T 3i2n_A           78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME  157 (357)
T ss_dssp             TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred             CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc
Confidence              699999999999999999 444 78889999999999955      6789999999999999999999886 666776


Q ss_pred             ccCC----ceeEEE----eecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec----CCCEEEEEeCCCCEE
Q psy17902        271 GHQS----AITSLD----ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV----NDQQFITCGEDGTLS  338 (454)
Q Consensus       271 ~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~----~~~~l~~~~~dg~i~  338 (454)
                      .|.+    .|.+++    |+|++++|++++.||.|++||++++.......|...+.++.+.    ++..|++++.||.|+
T Consensus       158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~  237 (357)
T 3i2n_A          158 PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH  237 (357)
T ss_dssp             CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred             ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence            5554    789998    7789999999999999999999999988778888899888887    578999999999999


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCc-------------------e
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKR-------------------T  398 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~-------------------~  398 (454)
                      +||+.++.+...+....    ...|...|++++|+|++. +|++|+.||.|++||+..+.                   .
T Consensus       238 i~d~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~  313 (357)
T 3i2n_A          238 VFDMRTQHPTKGFASVS----EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL  313 (357)
T ss_dssp             EEEEEEEETTTEEEEEE----EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred             EEeCcCCCcccceeeec----cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence            99998887776654211    012456699999999998 89999999999999998653                   3


Q ss_pred             eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       399 ~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +..+..  |.+.|++++|+|++++|+++++.|+.|++|+....
T Consensus       314 ~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~  354 (357)
T 3i2n_A          314 LQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL  354 (357)
T ss_dssp             EEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred             eecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence            444444  78899999999999999954489999999998654

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.5e-42  Score=321.05  Aligned_cols=292  Identities=16%  Similarity=0.264  Sum_probs=245.3

Q ss_pred             eEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----CcEE
Q psy17902        134 TKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NELV  205 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l  205 (454)
                      ....+  |.+.|++++|+|+    ...+++++.++.|++|++.++.....+.... ...|...|.+++|+|+    +.+|
T Consensus        12 ~~~~~--h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l   88 (366)
T 3k26_A           12 SLKED--HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV-DADADENFYTCAWTYDSNTSHPLL   88 (366)
T ss_dssp             EEECT--TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE-CSCTTCCEEEEEEEECTTTCCEEE
T ss_pred             EeecC--CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc-ccCCCCcEEEEEeccCCCCCCCEE
Confidence            44557  9999999999984    5567777778899999999776654443211 1236678999999999    6799


Q ss_pred             EEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEE
Q psy17902        206 ASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLD  280 (454)
Q Consensus       206 ~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~  280 (454)
                      ++|+.||.|++||+ ++..+..+.+|...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+   .+|...|.+++
T Consensus        89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~  168 (366)
T 3k26_A           89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD  168 (366)
T ss_dssp             EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred             EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence            99999999999999 6788888999999999999999 8999999999999999999999988887   68999999999


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEE-----------------------------EEccccCCeEEEEecCCCEEEEE
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQL-----------------------------VFNGHSRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------------------------~~~~~~~~i~~~~~~~~~~l~~~  331 (454)
                      |+|++++|++++.||.|++||++++...                             ....|...+.++.+. +++++++
T Consensus       169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~  247 (366)
T 3k26_A          169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSK  247 (366)
T ss_dssp             ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEE
T ss_pred             ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEE
Confidence            9999999999999999999999875433                             122378888888887 7899999


Q ss_pred             eCCCCEEEEecCCCcc--------------ceeeecccCCCCCCCCCCcEEEEEEecC--CCEEEEecCCCcEEEEEcCC
Q psy17902        332 GEDGTLSLWSILKKVP--------------THTIPVAHGYDSSSSEPNWITSVACLHN--SDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~  395 (454)
                      +.||.|++||+.+...              +..+.         .|...|++++|+|+  +++|++|+.||.|++||+.+
T Consensus       248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~  318 (366)
T 3k26_A          248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD---------YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV  318 (366)
T ss_dssp             CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE---------CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred             ecCCEEEEEeCCCccccccccccCCcchheecccc---------ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence            9999999999987654              22222         24455889999999  99999999999999999998


Q ss_pred             Ccee----eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        396 KRTL----EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       396 ~~~~----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      +...    ..+....+...|++++|+|++++|+++ +.|+.|++|+..
T Consensus       319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~  365 (366)
T 3k26_A          319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV-CDDASIWRWDRL  365 (366)
T ss_dssp             SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEEC-
T ss_pred             CCCccccceEEcccccCCceEEEEeCCCCCeEEEE-eCCCEEEEEEec
Confidence            7543    356653347899999999999999998 899999999974

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=8.4e-42  Score=337.15  Aligned_cols=292  Identities=14%  Similarity=0.202  Sum_probs=249.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....|.+  |...|++++|+|+|++||+|+.||+|+|||+.++......    ....|..+|.+++|+|++++|++++.+
T Consensus        51 ~~~~~~~--h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~----~~~~~~~~v~~v~fs~dg~~l~~~~~~  124 (611)
T 1nr0_A           51 DTEIYTE--HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT----TIPVFSGPVKDISWDSESKRIAAVGEG  124 (611)
T ss_dssp             CCEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE----EEECSSSCEEEEEECTTSCEEEEEECC
T ss_pred             cCeEecC--CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE----eecccCCceEEEEECCCCCEEEEEECC
Confidence            4567888  9999999999999999999999999999999754332111    112578899999999999999998765


Q ss_pred             ----CcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        212 ----SNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       212 ----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                          +.|++||. +.....+.+|...|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|++++|+|+++
T Consensus       125 ~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~  203 (611)
T 1nr0_A          125 RERFGHVFLFDT-GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS  203 (611)
T ss_dssp             SSCSEEEEETTT-CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred             CCceeEEEEeeC-CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence                47888884 556677899999999999999986 599999999999999999999999999999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEc-------cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFN-------GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~-------~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      +|++++.|++|++||+.++... .+.       +|...|.++.+. ++.+|++++.|++|++||+.+++.+..+..... 
T Consensus       204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~-  282 (611)
T 1nr0_A          204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR-  282 (611)
T ss_dssp             EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-
T ss_pred             EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC-
Confidence            9999999999999999988776 332       688889888776 567899999999999999999988887764322 


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                           +...+..+.|  ++..|++++.||.|++|+...+.....+.+  |...|++++|+|+|++|+++ +.|+.|++|+
T Consensus       283 -----~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g--h~~~v~~l~~spdg~~l~s~-s~D~~v~~Wd  352 (611)
T 1nr0_A          283 -----IEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYG--HNKAITALSSSADGKTLFSA-DAEGHINSWD  352 (611)
T ss_dssp             -----GGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred             -----ccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcC--CCCCEEEEEEeCCCCEEEEE-eCCCcEEEEE
Confidence                 1223566666  678999999999999999998887777765  88999999999999999999 8999999999


Q ss_pred             eeCC
Q psy17902        438 TIKG  441 (454)
Q Consensus       438 ~~~~  441 (454)
                      ...+
T Consensus       353 ~~~~  356 (611)
T 1nr0_A          353 ISTG  356 (611)
T ss_dssp             TTTC
T ss_pred             CCCC
Confidence            7654

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.8e-41  Score=311.29  Aligned_cols=292  Identities=15%  Similarity=0.221  Sum_probs=256.6

Q ss_pred             cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902        128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS  207 (454)
Q Consensus       128 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  207 (454)
                      ........|.+  |.+.|++++|+|++++|++|+.||.|++||+.++.....+.      .|...|.+++|+|++++|++
T Consensus        20 G~~~~~~~l~~--h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s   91 (369)
T 3zwl_B           20 GSHMKAIKLTG--HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD------GHTGTIWSIDVDCFTKYCVT   91 (369)
T ss_dssp             CCSEEEEEEEC--CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEE
T ss_pred             ccccccEEEEE--eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh------hcCCcEEEEEEcCCCCEEEE
Confidence            33446677888  99999999999999999999999999999999988877665      58889999999999999999


Q ss_pred             ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCce-----------eEEEee
Q psy17902        208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRA-----------YVETLF  270 (454)
Q Consensus       208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-----------~~~~~~  270 (454)
                      ++.||.|++||+ ++..+..+. |...|.+++|+|++.+|++++.+     |.|++||+....           .+..+.
T Consensus        92 ~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~  170 (369)
T 3zwl_B           92 GSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII  170 (369)
T ss_dssp             EETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred             EeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence            999999999999 566666666 88999999999999999999999     999999987653           334445


Q ss_pred             ccCC--ceeEEEeecCCCEEEEeeCCCcEEEeeccC-CeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC
Q psy17902        271 GHQS--AITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       271 ~~~~--~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                      .|..  .+.+++|+|++++|++++.||.|++||+++ .... .+..|...+.++.+. ++.+|++++.||.|++||+.++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~  250 (369)
T 3zwl_B          171 THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL  250 (369)
T ss_dssp             CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence            5666  899999999999999999999999999998 4555 677788888877765 5678999999999999999999


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--------------cEEEEEcCCCceeeEeccCCCceee
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--------------CVKLWKITPKRTLEFLQDIPLSGVI  411 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~v~iwd~~~~~~~~~~~~~~~~~~v  411 (454)
                      ..+..+..          ...+.+++|+|++.++++++.++              .|++||+.+++.+..+..  |.+.|
T Consensus       251 ~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~v  318 (369)
T 3zwl_B          251 QVLKKYET----------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG--HFGPL  318 (369)
T ss_dssp             CEEEEEEC----------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC--CSSCE
T ss_pred             ceeeeecC----------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec--ccCcE
Confidence            88888762          33499999999999999999988              899999999999888876  88999


Q ss_pred             eEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       412 ~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++++|+|++++|+++ +.|+.|++|+...+
T Consensus       319 ~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~  347 (369)
T 3zwl_B          319 NTVAISPQGTSYASG-GEDGFIRLHHFEKS  347 (369)
T ss_dssp             EEEEECTTSSEEEEE-ETTSEEEEEEECHH
T ss_pred             EEEEECCCCCEEEEE-cCCCeEEEEECccc
Confidence            999999999999998 89999999998653

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-41  Score=304.76  Aligned_cols=285  Identities=18%  Similarity=0.300  Sum_probs=248.2

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ...+.|.+  |.+.|++++| |++++|++|+.||.|++||+.+......+.      .|...|.+++|+|++.+|++|+.
T Consensus         9 ~~~~~l~~--h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~   79 (313)
T 3odt_A            9 QLSATLKG--HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY------TGQGFLNSVCYDSEKELLLFGGK   79 (313)
T ss_dssp             EEEEEECC--CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE------ECSSCEEEEEEETTTTEEEEEET
T ss_pred             HHHHHhhC--CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee------cCCccEEEEEECCCCCEEEEecC
Confidence            46778889  9999999999 999999999999999999998877665554      47889999999999999999999


Q ss_pred             CCcEEEEeC----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CC
Q psy17902        211 NSNIKLWSS----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KN  285 (454)
Q Consensus       211 dg~v~vw~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~  285 (454)
                      ||.|++|++    ....+..+..|...|.+++|  ++++|++++.||.|++||  .+..+..+..|...|.++.|+| ++
T Consensus        80 dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~  155 (313)
T 3odt_A           80 DTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSE  155 (313)
T ss_dssp             TSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred             CCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCC
Confidence            999999998    23557788899999999999  577999999999999999  6777888889999999999998 88


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      ++|++++.||.|++||...... .+.. +...+.++.+.++..+++++.||.|++||+.+++++..+..         |.
T Consensus       156 ~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---------~~  225 (313)
T 3odt_A          156 NKFLTASADKTIKLWQNDKVIK-TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG---------HE  225 (313)
T ss_dssp             TEEEEEETTSCEEEEETTEEEE-EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC---------CS
T ss_pred             CEEEEEECCCCEEEEecCceEE-EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc---------CC
Confidence            9999999999999999443222 4444 88889999888777799999999999999999988888764         34


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ..|++++|+|++ .|++++.||.|++||+.+++.+..+..  +...|++++|+|+++ ++++ +.|+.|++|+...+..
T Consensus       226 ~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~-~~~~-~~dg~i~iw~~~~~~~  299 (313)
T 3odt_A          226 SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL--PAISIWSVDCMSNGD-IIVG-SSDNLVRIFSQEKSRW  299 (313)
T ss_dssp             SCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC--SSSCEEEEEECTTSC-EEEE-ETTSCEEEEESCGGGC
T ss_pred             ceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec--cCceEEEEEEccCCC-EEEE-eCCCcEEEEeCCCCce
Confidence            559999999999 588999999999999999998888876  778999999999998 4455 7899999999876543

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.1e-41  Score=319.25  Aligned_cols=304  Identities=13%  Similarity=0.201  Sum_probs=249.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----C---cE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----N---EL  204 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~---~~  204 (454)
                      ....+.+  |.+.|++++|+|  ++|++|+.||.|++|++.+...............|...|.+++|+|+    +   .+
T Consensus         8 ~~~~~~~--h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~   83 (397)
T 1sq9_A            8 TANAGKA--HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL   83 (397)
T ss_dssp             EEEESSC--SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred             hhhhhhh--hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence            4667788  999999999999  89999999999999999987722111122222268889999999999    9   99


Q ss_pred             EEEecCCCcEEEEeC-CCcc-----EEeeccc-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------
Q psy17902        205 VASGDNNSNIKLWSS-SLEH-----LHTFTGH-----KAPITGLAIS----FECDT-LYSSSNDRSIKVWNIED------  262 (454)
Q Consensus       205 l~~~~~dg~v~vw~~-~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------  262 (454)
                      |++++.||.|++|++ ....     +..+..|     ...|.+++|+    |++.+ |++++.||.|++||+.+      
T Consensus        84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  163 (397)
T 1sq9_A           84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN  163 (397)
T ss_dssp             EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred             EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence            999999999999999 4454     7888888     5999999999    99999 99999999999999998      


Q ss_pred             ceeEE-----Ee-------eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEcc---c---cCCeEEEEec
Q psy17902        263 RAYVE-----TL-------FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNG---H---SRGIDMTRRV  323 (454)
Q Consensus       263 ~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~---~---~~~i~~~~~~  323 (454)
                      +..+.     .+       ..|...|.+++|+|++ +|++++.||.|++||++++..+ .+..   |   ...+.++.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~  242 (397)
T 1sq9_A          164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS  242 (397)
T ss_dssp             HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred             cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence            66655     66       3488999999999999 9999999999999999998877 5666   7   8888887776


Q ss_pred             -CCCEEEEEeCC---CCEEEEecCCCccceeeecccCC----CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        324 -NDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGY----DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       324 -~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                       ++.+|++++.|   |.|++||+.+++++..+......    .....|...|.+++|+|++++|++++.||.|++||+.+
T Consensus       243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  322 (397)
T 1sq9_A          243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT  322 (397)
T ss_dssp             SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence             57789999999   99999999999888777541000    00001455699999999999999999999999999999


Q ss_pred             CceeeEeccC----CC---------------ceeeeEEEEcCCC----------CEEEEEecCCCceeeeeeeCC
Q psy17902        396 KRTLEFLQDI----PL---------------SGVINSLVFTSDH----------KHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       396 ~~~~~~~~~~----~~---------------~~~v~~l~~s~d~----------~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++.+..+...    .|               ...|++++|+|++          ++|+++ +.|+.|++|+...+
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~-~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV-CLDRSIRWFREAGG  396 (397)
T ss_dssp             TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE-ETTTEEEEEEEEC-
T ss_pred             CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe-cCCCcEEEEEcCCC
Confidence            9888888711    15               8899999999998          688888 89999999998765

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-41  Score=320.08  Aligned_cols=287  Identities=18%  Similarity=0.265  Sum_probs=243.8

Q ss_pred             CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEc----CCCce------ecccCCcc----cCCCCCCceEEEEEeCCCcEE
Q psy17902        141 HRASITCIAVTSDSK-HVYSACKDGIIIKWLL----ETRSK------VCSSPFVK----TDRKSYPPILALAVANNNELV  205 (454)
Q Consensus       141 h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~----~~~~~------~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l  205 (454)
                      |.+.|++++|+|+++ +||+|+.||.|++|++    .++..      ...+....    ...+|...|.+++|+|++++|
T Consensus        44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l  123 (425)
T 1r5m_A           44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI  123 (425)
T ss_dssp             ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred             ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence            779999999999999 9999999999999999    77762      22221100    011256799999999999999


Q ss_pred             EEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE------------------
Q psy17902        206 ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE------------------  267 (454)
Q Consensus       206 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------  267 (454)
                      ++|+.||.|++|+.++..+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+.                  
T Consensus       124 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (425)
T 1r5m_A          124 VTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHS  203 (425)
T ss_dssp             EEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------------
T ss_pred             EEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecccc
Confidence            99999999999999888999999999999999999999999999999999999998765443                  


Q ss_pred             --------------------------------------EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902        268 --------------------------------------TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-  308 (454)
Q Consensus       268 --------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-  308 (454)
                                                            .+..|...|.+++|+|++++|++++.|+.|++||++++... 
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~  283 (425)
T 1r5m_A          204 GDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN  283 (425)
T ss_dssp             --CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred             CCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence                                                  23357788999999999999999999999999999987765 


Q ss_pred             EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902        309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV  388 (454)
Q Consensus       309 ~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v  388 (454)
                      .+..|...+.++.+.++..+++++.||.|++||+.++..+..+..         |...|.+++|+|++++|++++.||.|
T Consensus       284 ~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i  354 (425)
T 1r5m_A          284 CFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV---------DGVPIFAGRISQDGQKYAVAFMDGQV  354 (425)
T ss_dssp             EECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC---------TTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc---------CCccEEEEEEcCCCCEEEEEECCCeE
Confidence            667788899888887766999999999999999999988877764         34459999999999999999999999


Q ss_pred             EEEEcCCCc--------------------eeeEeccCCCce--eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        389 KLWKITPKR--------------------TLEFLQDIPLSG--VINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       389 ~iwd~~~~~--------------------~~~~~~~~~~~~--~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++|++.++.                    .+..+..  |..  .|++++|+|++++|+++ +.|+.|++|++.
T Consensus       355 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~  424 (425)
T 1r5m_A          355 NVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS--SQDNDYIFDLSWNCAGNKISVA-YSLQEGSVVAIP  424 (425)
T ss_dssp             EEEECHHHHC--------------CEECCEEEEECC--TTCCCCEEEEEECTTSSEEEEE-ESSSCCEEEECC
T ss_pred             EEEECCCCccceeeeecccccccCcccchhhhhhcC--cccCCceEEEEccCCCceEEEE-ecCceEEEEeec
Confidence            999998877                    6777765  544  89999999999999988 899999999864

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=5e-41  Score=336.94  Aligned_cols=295  Identities=21%  Similarity=0.331  Sum_probs=244.8

Q ss_pred             ceeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe
Q psy17902        130 TVVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG  208 (454)
Q Consensus       130 ~~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  208 (454)
                      ......+.+  |.+.|++++|+|+ +++|++|+.||+|++|++......... ......+|...|.+++|+|++++|++|
T Consensus       372 l~~~~~l~~--H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~-~~~~~~~h~~~v~~v~~s~~g~~l~sg  448 (694)
T 3dm0_A          372 LVLKGTMRA--HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGV-AQRRLTGHSHFVEDVVLSSDGQFALSG  448 (694)
T ss_dssp             SEEEEEEEC--CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCE-EEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred             cchhhhccc--CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccc-ccceecCCCCcEEEEEECCCCCEEEEE
Confidence            345567888  9999999999986 479999999999999999764321110 011123688999999999999999999


Q ss_pred             cCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEEeecC
Q psy17902        209 DNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLDILAK  284 (454)
Q Consensus       209 ~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~  284 (454)
                      +.||.|+|||+ ++..+..+.+|...|.+++|+|++++|++|+.|++|++||+.........   .+|...|.+++|+|+
T Consensus       449 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  528 (694)
T 3dm0_A          449 SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN  528 (694)
T ss_dssp             ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred             eCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence            99999999999 67778889999999999999999999999999999999998765433322   368899999999998


Q ss_pred             C--CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        285 N--RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       285 ~--~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                      +  .+|++++.|+.|++||+++.... .+.+|...+.++.++ ++.+|++++.||.|++||+.+++.+..+..       
T Consensus       529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-------  601 (694)
T 3dm0_A          529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-------  601 (694)
T ss_dssp             SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-------
T ss_pred             CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-------
Confidence            7  68999999999999999988776 788899999888776 567899999999999999999987766542       


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-----------------CceeeeEEEEcCCCCEE
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-----------------LSGVINSLVFTSDHKHL  423 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~v~~l~~s~d~~~l  423 (454)
                         ...|.+++|+|++.+|++++ ++.|++||+.++..+..+....                 +...+++++|+|+|++|
T Consensus       602 ---~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l  677 (694)
T 3dm0_A          602 ---NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL  677 (694)
T ss_dssp             ---SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred             ---CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence               23499999999999888776 4569999999987776654311                 11237899999999999


Q ss_pred             EEEecCCCceeeeeee
Q psy17902        424 VAGIGTEHRFGRWKTI  439 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~  439 (454)
                      +++ +.||.|++|++.
T Consensus       678 ~sg-s~Dg~i~iW~i~  692 (694)
T 3dm0_A          678 FSG-YTDGVIRVWGIG  692 (694)
T ss_dssp             EEE-ETTSEEEEEEC-
T ss_pred             EEE-cCCCeEEEEecc
Confidence            998 899999999974

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=5.9e-41  Score=302.15  Aligned_cols=244  Identities=16%  Similarity=0.278  Sum_probs=221.3

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +|...|.+++|+|++++|++|+.||.|++||+ ++..+..+..|..+|.+++|+|++++|++|+.|++|++||+.+++.+
T Consensus        11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~   90 (304)
T 2ynn_A           11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV   90 (304)
T ss_dssp             EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence            68889999999999999999999999999999 67778889999999999999999999999999999999999999999


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEec
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~  342 (454)
                      ..+.+|...|++++|+|++.+|++|+.|++|++||++++...  .+.+|...+.++.+.+  +..|++|+.|+.|++||+
T Consensus        91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~  170 (304)
T 2ynn_A           91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL  170 (304)
T ss_dssp             EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred             EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence            999999999999999999999999999999999999987443  6788999999988875  468999999999999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEec--CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      ....+...+...+        ...+..+.|+|  ++.+|++|+.||+|++||+.+++.+..+..  |...|++++|+|++
T Consensus       171 ~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~--h~~~v~~~~~~p~~  240 (304)
T 2ynn_A          171 GQSTPNFTLTTGQ--------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG--HMSNVSFAVFHPTL  240 (304)
T ss_dssp             TCSSCSEEEECCC--------TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSS
T ss_pred             CCCCccceeccCC--------cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC--CCCCEEEEEECCCC
Confidence            8887776665332        34488999987  678999999999999999999999988887  88999999999999


Q ss_pred             CEEEEEecCCCceeeeeeeCCC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++|+++ +.|+.|++|+..++.
T Consensus       241 ~~l~s~-s~Dg~i~iWd~~~~~  261 (304)
T 2ynn_A          241 PIIISG-SEDGTLKIWNSSTYK  261 (304)
T ss_dssp             SEEEEE-ETTSCEEEEETTTCC
T ss_pred             CEEEEE-cCCCeEEEEECCCCc
Confidence            999988 899999999976543

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=300.88  Aligned_cols=246  Identities=17%  Similarity=0.272  Sum_probs=224.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |...|.+++|+|++.++++++.||.|++||+.++..+..+.      .+...+.+++|+|++++|++|+.+
T Consensus        72 ~~~~l~g--h~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~------~~~~~~~~~~~spdg~~l~~g~~d  143 (321)
T 3ow8_A           72 LQWSLEG--HQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID------AGPVDAWTLAFSPDSQYLATGTHV  143 (321)
T ss_dssp             EEEEECC--CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCTTCCCCEEECTTSSEEEEECTT
T ss_pred             eeeeecc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe------CCCccEEEEEECCCCCEEEEEcCC
Confidence            3456788  99999999999999999999999999999999988776654      466788999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      |.|++|++ .+.....+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|..+|++++|+|++++|++
T Consensus       144 g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s  223 (321)
T 3ow8_A          144 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT  223 (321)
T ss_dssp             SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred             CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE
Confidence            99999999 67777888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      |+.|+.|++||++++... .+.+|...+.++.+. ++.+|++++.|+.|++||+.++.++..+..         |...|.
T Consensus       224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---------h~~~v~  294 (321)
T 3ow8_A          224 ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD---------HQDQVW  294 (321)
T ss_dssp             ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---------CSSCEE
T ss_pred             EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC---------CCCcEE
Confidence            999999999999988776 788899989887776 567899999999999999999988888753         445599


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      +++|+|++.+|++++.||+|++||+.
T Consensus       295 ~v~~s~~g~~l~s~~~d~~i~vwd~p  320 (321)
T 3ow8_A          295 GVKYNGNGSKIVSVGDDQEIHIYDCP  320 (321)
T ss_dssp             EEEECTTSSEEEEEETTCCEEEEECC
T ss_pred             EEEECCCCCEEEEEeCCCeEEEEeCC
Confidence            99999999999999999999999963

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=7.7e-40  Score=321.89  Aligned_cols=283  Identities=24%  Similarity=0.440  Sum_probs=250.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |...|++++|+|++++|++++.|+.|++|+... .....+.      +|...|.+++|+|++.+|++++.|
T Consensus       254 ~~~~~~~--~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~~~~~------~h~~~v~~~~~~~~~~~l~t~~~d  324 (577)
T 2ymu_A          254 LLQTLTG--HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLLQTLT------GHSSSVWGVAFSPDGQTIASASDD  324 (577)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEEEec--CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEEEEEe------cCCCCeEEEEECCCCCEEEEEeCC
Confidence            5567788  999999999999999999999999999999754 3333333      688899999999999999999999


Q ss_pred             CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      |.|++|+..+..+..+..|...|.+++|+|++.+|++++.||.|++||. +++.+..+.+|...|++++|+|++++|+++
T Consensus       325 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~  403 (577)
T 2ymu_A          325 KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA  403 (577)
T ss_dssp             SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred             CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence            9999999988888999999999999999999999999999999999996 467788889999999999999999999999


Q ss_pred             eCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      +.|+.|++||........+.+|...+.++.+. ++.+|++++.|+.|++||+ +++.+..+..         |...|+++
T Consensus       404 ~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~---------~~~~v~~~  473 (577)
T 2ymu_A          404 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTG---------HSSSVRGV  473 (577)
T ss_dssp             ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEEC---------CSSCEEEE
T ss_pred             eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcC---------CCCCEEEE
Confidence            99999999997655555788899999877765 5678999999999999996 4455555543         45559999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +|+|++++|++++.|++|++|+. +++.+..+..  |...|++++|+|||++|+++ +.|+.|++|+.
T Consensus       474 ~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~-~~dg~v~lwd~  537 (577)
T 2ymu_A          474 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQTIASA-SDDKTVKLWNR  537 (577)
T ss_dssp             EECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEECT
T ss_pred             EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC--CCCCEEEEEEcCCCCEEEEE-ECcCEEEEEeC
Confidence            99999999999999999999995 5778888876  88999999999999999998 89999999995

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=1.5e-40  Score=312.06  Aligned_cols=245  Identities=21%  Similarity=0.380  Sum_probs=224.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.+.|++++|+|++++|++|+.||+|++||+.+...+..+.      +|...|.+++|+|++.+|++|+.|
T Consensus       142 ~~~~l~~--h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~~p~~~~l~s~s~D  213 (410)
T 1vyh_C          142 FERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH------GHDHNVSSVSIMPNGDHIVSASRD  213 (410)
T ss_dssp             CCEEECC--CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred             EEEEEec--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc------CCCCCEEEEEEeCCCCEEEEEeCC
Confidence            3567888  99999999999999999999999999999999888776665      688899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC------
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK------  284 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------  284 (454)
                      +.|++||+ ++..+..+.+|...|.++.|+|++.+|++|+.|+.|++||+.++.+...+.+|...|.+++|+|+      
T Consensus       214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~  293 (410)
T 1vyh_C          214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI  293 (410)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred             CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccch
Confidence            99999999 77888899999999999999999999999999999999999999999999999999999999986      


Q ss_pred             --------------CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        285 --------------NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       285 --------------~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                                    +.+|++|+.|+.|++||++++..+ .+.+|...+.++.+. ++.+|++++.||.|++||+.++.++
T Consensus       294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~  373 (410)
T 1vyh_C          294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  373 (410)
T ss_dssp             GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             hhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence                          678999999999999999998877 778899999877776 5678999999999999999999888


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ..+..         |...|++++|+|++.+|++|+.||+|++|++
T Consensus       374 ~~~~~---------h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~  409 (410)
T 1vyh_C          374 KTLNA---------HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC  409 (410)
T ss_dssp             EEEEC---------CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred             EEEcC---------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence            88764         4455999999999999999999999999986

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.4e-40  Score=305.40  Aligned_cols=283  Identities=13%  Similarity=0.122  Sum_probs=237.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |.++|++++|+|++++|++|+.||.|++||+.++.  ....+.      .|...|.+++|+|++++|++++.||.|++|+
T Consensus         7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd   80 (372)
T 1k8k_C            7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK------EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT   80 (372)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE------CCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred             cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec------CCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence            99999999999999999999999999999999876  444443      5888999999999999999999999999999


Q ss_pred             C-CCcc--EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee---E-EEeeccCCceeEEEeecCCCEEEEe
Q psy17902        219 S-SLEH--LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY---V-ETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       219 ~-~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      + .+..  ...+..|...|.+++|+|++++|++++.||.|++||+..+..   . ....+|...|.+++|+|++++|+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  160 (372)
T 1k8k_C           81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG  160 (372)
T ss_dssp             EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred             CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence            9 4433  334467999999999999999999999999999999988762   2 2335689999999999999999999


Q ss_pred             eCCCcEEEeecc------------------CCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902        292 GTDKSVRVWKIQ------------------EESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       292 ~~dg~i~i~d~~------------------~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                      +.||.|++||++                  .+..+ .+..|...+.++.+. ++.+|++++.||.|++||+.+++++..+
T Consensus       161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  240 (372)
T 1k8k_C          161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL  240 (372)
T ss_dssp             ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred             cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence            999999999964                  44554 666888888888775 5679999999999999999999888887


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC--Cce--e----------------------------
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP--KRT--L----------------------------  399 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~--~~~--~----------------------------  399 (454)
                      ..         |...|.+++|+|++.+|++| .||.|++|++..  +..  +                            
T Consensus       241 ~~---------~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (372)
T 1k8k_C          241 AS---------ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS  310 (372)
T ss_dssp             EC---------SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred             cc---------CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence            64         33449999999999988888 899999999987  420  0                            


Q ss_pred             --------eEeccCCCceeeeEEEEc-CCC---CEEEEEecCCCceeeeeeeCC
Q psy17902        400 --------EFLQDIPLSGVINSLVFT-SDH---KHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       400 --------~~~~~~~~~~~v~~l~~s-~d~---~~l~~~~~~d~~i~~W~~~~~  441 (454)
                              ..+. ..|..+|++++|+ ++|   .+|+++ +.||.|++|+...+
T Consensus       311 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~-~~Dg~i~~W~~~~~  362 (372)
T 1k8k_C          311 SEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTT-GMDGGMSIWDVRSL  362 (372)
T ss_dssp             --------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEE-ETTSEEEEEEHHHH
T ss_pred             cccCcccccccc-ccccCCcceeEEecCCCcceeeEEEe-cCCCceEEEEecCh
Confidence                    1121 1488899999966 666   899888 89999999997543

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.3e-40  Score=315.52  Aligned_cols=295  Identities=14%  Similarity=0.137  Sum_probs=231.4

Q ss_pred             eEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCC
Q psy17902        134 TKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNN  211 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d  211 (454)
                      ....+  |...|+||+|+| ++++||+|+.||.|+|||+.++.....+.    ..+|...|++|+|+| ++.+|++|+.|
T Consensus       113 ~~~~~--~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~----~~gH~~~V~~l~f~p~~~~~l~s~s~D  186 (435)
T 4e54_B          113 QKAAP--FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK----GIGAGGSITGLKFNPLNTNQFYASSME  186 (435)
T ss_dssp             CEEEE--CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC----CCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred             ccCCC--CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE----ccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence            34455  999999999999 56799999999999999998765443322    236899999999998 68999999999


Q ss_pred             CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC-E
Q psy17902        212 SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR-V  287 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~  287 (454)
                      |+|++||+.+..+..+..   +...+.+++|+|++.+|++|+.||.|++||++. +.+..+.+|...|++++|+|++. +
T Consensus       187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~  265 (435)
T 4e54_B          187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWF  265 (435)
T ss_dssp             SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred             CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceE
Confidence            999999997666555443   345678999999999999999999999999974 55677889999999999999875 7


Q ss_pred             EEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      |++|+.|+.|++||+++....    ...+|...|.++.+. ++.+|++++.||.|+|||+.++.....+..+.....   
T Consensus       266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~---  342 (435)
T 4e54_B          266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF---  342 (435)
T ss_dssp             EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC---
T ss_pred             EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc---
Confidence            889999999999999876543    446788889888765 578999999999999999998877666543221100   


Q ss_pred             CCCcEEEEEEecCCCEEEEec------------CCCcEEEEEcCCCceeeEeccCCCceeeeEE-EEcCCCCEEEEEecC
Q psy17902        363 EPNWITSVACLHNSDLVASGS------------YDGCVKLWKITPKRTLEFLQDIPLSGVINSL-VFTSDHKHLVAGIGT  429 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~~~~~~  429 (454)
                      ....+..+.|+|++.++++++            .++.|++||..+++.+..+.. .|...|.++ +|+|+|.+|+++  .
T Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~-~~~~~v~s~~~fspdg~~lasg--~  419 (435)
T 4e54_B          343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD-PESSGISSLNEFNPMGDTLASA--M  419 (435)
T ss_dssp             SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC-SSCCCCCCEEEECTTSSCEEEE--C
T ss_pred             ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC-CCCCcEEEEEEECCCCCEEEEE--c
Confidence            111123345566555555543            345799999999988887754 367778887 699999999876  4


Q ss_pred             CCceeeeeeeCC
Q psy17902        430 EHRFGRWKTIKG  441 (454)
Q Consensus       430 d~~i~~W~~~~~  441 (454)
                      |+.|++|+...+
T Consensus       420 d~~i~iW~~~~g  431 (435)
T 4e54_B          420 GYHILIWSQQEA  431 (435)
T ss_dssp             SSEEEECCCC--
T ss_pred             CCcEEEEECCcC
Confidence            789999998765

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-39  Score=305.93  Aligned_cols=282  Identities=16%  Similarity=0.266  Sum_probs=240.6

Q ss_pred             CCCC--eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRAS--ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~--V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |...  +.+++|++  ..+++++.||.|++|++.++........     .|...|.+++|+|++.+|++|+.||.|++||
T Consensus        90 ~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd  162 (401)
T 4aez_A           90 IIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-----DESTYVASVKWSHDGSFLSVGLGNGLVDIYD  162 (401)
T ss_dssp             CCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-----CTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             CcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-----CCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence            7665  45566665  5688889999999999999887665543     4778999999999999999999999999999


Q ss_pred             C-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        219 S-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       219 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      + .+..+..+..|...|.+++|+  +++|++|+.||.|++||+. ....+..+.+|...|.+++|+|++++|++|+.|+.
T Consensus       163 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~  240 (401)
T 4aez_A          163 VESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV  240 (401)
T ss_dssp             TTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             CcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence            9 678888999999999999994  6799999999999999998 56667888899999999999999999999999999


Q ss_pred             EEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        297 VRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       297 i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      |++||++++... .+..|...+.++.+.+ + ..+++++  .|+.|++||+.++.++..+..          ...|.+++
T Consensus       241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~----------~~~v~~~~  310 (401)
T 4aez_A          241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA----------GSQVTSLI  310 (401)
T ss_dssp             EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC----------SSCEEEEE
T ss_pred             EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC----------CCcEEEEE
Confidence            999999988777 6778888888888875 4 4556654  799999999999988887752          23499999


Q ss_pred             EecCCCEEEE--ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        372 CLHNSDLVAS--GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       372 ~s~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |+|++++|++  |+.||.|++|++.++..........|.+.|++++|+|+|++|+++ +.|+.|++|+...+.
T Consensus       311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-~~dg~i~iw~~~~~~  382 (401)
T 4aez_A          311 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA-ASDENLKFWRVYDGD  382 (401)
T ss_dssp             ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE-CTTSEEEEEECCC--
T ss_pred             ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCc
Confidence            9999999998  558999999999987655554333488999999999999999998 899999999987654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-40  Score=313.53  Aligned_cols=298  Identities=14%  Similarity=0.191  Sum_probs=241.8

Q ss_pred             eeEeEe-ccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC---Cceec-ccCCcccCCCCCCceEEEEEeCCCcE
Q psy17902        131 VVCTKF-NGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLET---RSKVC-SSPFVKTDRKSYPPILALAVANNNEL  204 (454)
Q Consensus       131 ~~~~~~-~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~---~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~  204 (454)
                      ..+..+ .+  |.+.|++++|+| ++++|++|+.||.|+|||+.+   +.... ...     ..|...|.+++|+|++.+
T Consensus        53 ~~~~~~~~~--h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~  125 (437)
T 3gre_A           53 KLIATLMEN--EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT-----YDCSSTVTQITMIPNFDA  125 (437)
T ss_dssp             CEEEEECTT--TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE-----EECSSCEEEEEECTTSSE
T ss_pred             eEEeeeccC--CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee-----ccCCCCEEEEEEeCCCCE
Confidence            345566 78  999999999999 999999999999999999876   32111 111     147889999999999999


Q ss_pred             EEEecCCCcEEEEeC----CCccEEeec----------c--cCCCeEEEE--EcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        205 VASGDNNSNIKLWSS----SLEHLHTFT----------G--HKAPITGLA--ISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       205 l~~~~~dg~v~vw~~----~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      |++|+.||.|++||+    .+..+..+.          .  +...+.++.  +++++.+|++|+.||.|++||+.+++.+
T Consensus       126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~  205 (437)
T 3gre_A          126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL  205 (437)
T ss_dssp             EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred             EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence            999999999999998    333333222          1  556677777  5578999999999999999999999999


Q ss_pred             EEeec--cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc-cccCCeEEEEec-----CCCEEEEEeCCCCE
Q psy17902        267 ETLFG--HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN-GHSRGIDMTRRV-----NDQQFITCGEDGTL  337 (454)
Q Consensus       267 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~-~~~~~i~~~~~~-----~~~~l~~~~~dg~i  337 (454)
                      ..+.+  |...|++++|+|++++|++|+.||.|++||++++..+ .+. .|...+.++.+.     ++.+|++++.||.|
T Consensus       206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i  285 (437)
T 3gre_A          206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL  285 (437)
T ss_dssp             EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred             EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence            99988  8999999999999999999999999999999998887 333 666778777544     24588999999999


Q ss_pred             EEEecCCCccceeeecccCCCC---------------C--CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDS---------------S--SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~---------------~--~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                      ++||+.++..+..+........               .  ..|...|++++|+ ++++|++|+.||.|++||+.+++.+.
T Consensus       286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~  364 (437)
T 3gre_A          286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK  364 (437)
T ss_dssp             EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred             EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence            9999999988877764321100               0  1267779999999 77899999999999999999988777


Q ss_pred             EeccC-----------------------------------CCceeeeEEEEcCC--CCEEEEEecCCCceeeee
Q psy17902        401 FLQDI-----------------------------------PLSGVINSLVFTSD--HKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       401 ~~~~~-----------------------------------~~~~~v~~l~~s~d--~~~l~~~~~~d~~i~~W~  437 (454)
                      .+...                                   .|...|++++|+++  +.+|+++ +.||.|++|+
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~-~~dG~I~iw~  437 (437)
T 3gre_A          365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVAC-DNSGLIGIFQ  437 (437)
T ss_dssp             EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEE-ETTSCEEEEC
T ss_pred             EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEE-cCCceEEEeC
Confidence            66542                                   17788999999998  6677777 8999999995

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.5e-39  Score=294.90  Aligned_cols=257  Identities=17%  Similarity=0.317  Sum_probs=220.8

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .....|.+  |...|.+++|+|++++|++|+.||+|++||+.+++....+.      +|...|.+++|+|++.+|++|+.
T Consensus        56 ~~~~~~~~--h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~  127 (319)
T 3frx_A           56 VPVRSFKG--HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV------GHKSDVMSVDIDKKASMIISGSR  127 (319)
T ss_dssp             EEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEECTTSCEEEEEET
T ss_pred             ccceEEeC--CcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc------cCCCcEEEEEEcCCCCEEEEEeC
Confidence            35678889  99999999999999999999999999999999988776655      68899999999999999999999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFE------CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      |+.|++||+.+..+..+.+|...|.++.|+|.      +..|++++.|+.|++||+.+++....+.+|...|++++|+|+
T Consensus       128 D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~  207 (319)
T 3frx_A          128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD  207 (319)
T ss_dssp             TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT
T ss_pred             CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC
Confidence            99999999988899999999999999999985      448999999999999999999999899999999999999999


Q ss_pred             CCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +++|++++.||.|++||+.+++.+....+...+..+.+.++..+++++.++.+++|++.....+..+..... .....+.
T Consensus       208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~-~~~~~~~  286 (319)
T 3frx_A          208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFA-GYSKAAE  286 (319)
T ss_dssp             SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCT-TCCGGGC
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCcccc-ccccCcC
Confidence            999999999999999999999887444455677777776655555555566699999988766655542211 1111245


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ..+.+++|+|+|++|++|+.||.|+||++.++
T Consensus       287 ~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~  318 (319)
T 3frx_A          287 PHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA  318 (319)
T ss_dssp             CCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred             cceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence            56999999999999999999999999998754

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.3e-39  Score=307.34  Aligned_cols=279  Identities=18%  Similarity=0.233  Sum_probs=235.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~  222 (454)
                      .+++++|+|++++|++++.||.|++||+.+......+.      .+ ..+....|++++++|++|+.||.|++||+ .+.
T Consensus        58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~------~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  130 (420)
T 3vl1_A           58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK------RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL  130 (420)
T ss_dssp             CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC------SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred             cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe------cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence            35589999999999999999999999998766554433      23 44555678999999999999999999999 555


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                      ....+..|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus       131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~  210 (420)
T 3vl1_A          131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC  210 (420)
T ss_dssp             EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence            66666899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCeEE-EEcc---ccCCeEEEEe----------------------cCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        303 QEESQL-VFNG---HSRGIDMTRR----------------------VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       303 ~~~~~~-~~~~---~~~~i~~~~~----------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      ++++.. .+..   +...+..+.+                      +++.+|++++.||.|++||++++..+..+...  
T Consensus       211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--  288 (420)
T 3vl1_A          211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK--  288 (420)
T ss_dssp             TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT--
T ss_pred             CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc--
Confidence            998877 4443   3444544443                      35668999999999999999998877776432  


Q ss_pred             CCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCce-eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902        357 YDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRT-LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFG  434 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~  434 (454)
                            |...|++++|+|++. +|++|+.||.|++||+.++.. +..+.. .+...|+++.| +++++|+++ +.|+.|+
T Consensus       289 ------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~-~~~~~l~s~-~~d~~v~  359 (420)
T 3vl1_A          289 ------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEGTPINNVYF-AAGALFVSS-GFDTSIK  359 (420)
T ss_dssp             ------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-STTSCEEEEEE-ETTEEEEEE-TTTEEEE
T ss_pred             ------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCCCCceEEEe-CCCCEEEEe-cCCccEE
Confidence                  345599999999999 999999999999999998743 555554 25677888855 577888887 8999999


Q ss_pred             eeeeeC
Q psy17902        435 RWKTIK  440 (454)
Q Consensus       435 ~W~~~~  440 (454)
                      +|+...
T Consensus       360 iw~~~~  365 (420)
T 3vl1_A          360 LDIISD  365 (420)
T ss_dssp             EEEECC
T ss_pred             EEeccC
Confidence            999865

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.7e-40  Score=299.81  Aligned_cols=295  Identities=13%  Similarity=0.148  Sum_probs=250.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce---ecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK---VCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~v  216 (454)
                      |.+.|++++|+|++++|++++.||.|++|++.++..   .....      .|...|.+++|+|+++ +|++|+.||.|++
T Consensus        10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~   83 (342)
T 1yfq_A           10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL------RYKHPLLCCNFIDNTDLQIYVGTVQGEILK   83 (342)
T ss_dssp             CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE------ECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred             CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee------ecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence            999999999999999999999999999999987761   11111      5788999999999999 9999999999999


Q ss_pred             EeC-CCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------ceeEEEeeccCCceeEEEeecC
Q psy17902        217 WSS-SLEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIED---------RAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       217 w~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                      |++ .......+..  |...|.+++|+| +.+|++++.|+.|++||+.+         ++.+..+. |...|.+++|+|+
T Consensus        84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~  161 (342)
T 1yfq_A           84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS  161 (342)
T ss_dssp             ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred             EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence            999 8888888999  999999999999 99999999999999999987         66666665 8899999999987


Q ss_pred             CCEEEEeeCCCcEEEeeccC-CeEE---EEccccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCC------ccceeee
Q psy17902        285 NRVISSGGTDKSVRVWKIQE-ESQL---VFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKK------VPTHTIP  352 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~~-~~~~---~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~  352 (454)
                      +  +++++.++.|++||+++ ....   ....+...+.++.+.  ++.++++++.||.|++|++...      .....+.
T Consensus       162 ~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~  239 (342)
T 1yfq_A          162 R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR  239 (342)
T ss_dssp             E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred             c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence            7  88999999999999998 4432   555677788887776  4789999999999999999887      6666666


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC-ceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                      .+........|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..  | .++|++++  |++++|+++ +.|+
T Consensus       240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~h~~~v~~~~--~~~~~l~s~-s~Dg  314 (342)
T 1yfq_A          240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK--FNEDSVVKIA--CSDNILCLA-TSDD  314 (342)
T ss_dssp             CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--CSSSEEEEEE--ECSSEEEEE-EECT
T ss_pred             cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc--ccCCCceEec--CCCCeEEEE-ecCC
Confidence            5433222223455799999999999999999999999999999998888876  5 88999999  999999999 7899


Q ss_pred             c-eeeee---eeCCCeeEEEEEE
Q psy17902        432 R-FGRWK---TIKGVKNTVAIID  450 (454)
Q Consensus       432 ~-i~~W~---~~~~~~~~~~~~~  450 (454)
                      . ...|.   ......+.+++..
T Consensus       315 ~~~~~~~~~~~~~~~~~~i~~~~  337 (342)
T 1yfq_A          315 TFKTNAAIDQTIELNASSIYIIF  337 (342)
T ss_dssp             HHHHCSSSCTTSCCCCCEEEEEE
T ss_pred             cccccccccccCCCCCceEEEec
Confidence            8 66666   3455566777765

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1.4e-39  Score=297.28  Aligned_cols=243  Identities=16%  Similarity=0.193  Sum_probs=205.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      |...|++++|+|++ .|++|+.||.|+|||+.+++.......  ...+|...|++++|+|++++|++|+.||.|++||+ 
T Consensus        81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~--~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~  157 (344)
T 4gqb_B           81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKF--CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA  157 (344)
T ss_dssp             ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEE--EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeec--cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence            67789999999984 788999999999999998765443221  11268889999999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecC-CCEEEEeeCCC
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAK-NRVISSGGTDK  295 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~dg  295 (454)
                      ++..+..+.+|...|++++|++++ .+|++|+.|++|++||+++++.+..+.  .|...+.+++|+|+ +++|++|+.||
T Consensus       158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg  237 (344)
T 4gqb_B          158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG  237 (344)
T ss_dssp             TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred             CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence            778889999999999999999987 478999999999999999998887764  45667999999985 57889999999


Q ss_pred             cEEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        296 SVRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       296 ~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      .|++||+++++.+ .+.+|...|.++.+.+ + .+|++|+.|++|+|||+.+++.... .         .|...|++++|
T Consensus       238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~---------~H~~~V~~v~~  307 (344)
T 4gqb_B          238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-Q---------AHRDFVRDATW  307 (344)
T ss_dssp             EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-C---------CCSSCEEEEEE
T ss_pred             cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-c---------CCCCCEEEEEE
Confidence            9999999988776 7889999999888875 3 4688999999999999988865432 1         25667999999


Q ss_pred             ecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902        373 LHNSD-LVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       373 s~~~~-~l~~~~~dg~v~iwd~~~~  396 (454)
                      +|++. +|++|+.||+|++|++.+.
T Consensus       308 sp~~~~llas~s~D~~v~~w~v~~~  332 (344)
T 4gqb_B          308 SPLNHSLLTTVGWDHQVVHHVVPTE  332 (344)
T ss_dssp             CSSSTTEEEEEETTSCEEEEECCC-
T ss_pred             eCCCCeEEEEEcCCCeEEEEECCCC
Confidence            99886 6789999999999999765

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-40  Score=313.55  Aligned_cols=285  Identities=14%  Similarity=0.229  Sum_probs=241.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----CceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLET----RSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIK  215 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~  215 (454)
                      |...|++++|+|++++|++|+.||.|++|++.+    ......+.      .|...|.+++|+|+ +.+|++++.||.|+
T Consensus        66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  139 (416)
T 2pm9_A           66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS------NHSSSVKTVKFNAKQDNVLASGGNNGEIF  139 (416)
T ss_dssp             CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC------CSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred             cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc------CCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence            889999999999999999999999999999987    23444333      68889999999998 89999999999999


Q ss_pred             EEeC-CCc------cE---EeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeecc------CCceeE
Q psy17902        216 LWSS-SLE------HL---HTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGH------QSAITS  278 (454)
Q Consensus       216 vw~~-~~~------~~---~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~  278 (454)
                      +||+ ...      ..   ..+..|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+..|      ...|.+
T Consensus       140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~  219 (416)
T 2pm9_A          140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV  219 (416)
T ss_dssp             BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred             EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence            9999 333      22   234679999999999998 789999999999999999999998888766      789999


Q ss_pred             EEeecCC-CEEEEeeCCC---cEEEeeccCCe-EE-EEc-cccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        279 LDILAKN-RVISSGGTDK---SVRVWKIQEES-QL-VFN-GHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       279 ~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~-~~-~~~-~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      ++|+|++ .+|++++.|+   .|++||++++. .. .+. +|...+.++.+.  ++.+|++++.||.|++||+.+++++.
T Consensus       220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~  299 (416)
T 2pm9_A          220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS  299 (416)
T ss_dssp             EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred             EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence            9999997 6899999998   99999999863 33 555 788899888876  47789999999999999999998888


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEecc------------------------
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQD------------------------  404 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~------------------------  404 (454)
                      .+..         |...|.+++|+|++ .+|++++.||.|++|++.++........                        
T Consensus       300 ~~~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (416)
T 2pm9_A          300 QFPA---------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK  370 (416)
T ss_dssp             EEEC---------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC
T ss_pred             eecC---------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc
Confidence            8764         34459999999999 8999999999999999987643322110                        


Q ss_pred             ---------CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        405 ---------IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       405 ---------~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                               ..+..++++++|+|+|++|+++ +.|+.|++|++.++
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~-~~d~~v~~w~~~~~  415 (416)
T 2pm9_A          371 PSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT-PDGKGVSITNPKIS  415 (416)
T ss_dssp             CCSSCCCCCSTTCCCSCCCEEETTTEEECBC-TTSSCBCCBCCCCC
T ss_pred             cccccccCCccccCCccceEEeeCCeEEEEe-CCCCeEEEEEeccC
Confidence                     0145678899999999999988 89999999998654

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-40  Score=312.18  Aligned_cols=287  Identities=15%  Similarity=0.240  Sum_probs=241.7

Q ss_pred             CCCCeEEEEEcCCCC-EEEEE----------eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        141 HRASITCIAVTSDSK-HVYSA----------CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~-~l~~~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      +...|.+++|+|++. +|++|          +.||.|++|++.++........    ..|...|.+++|+|++.+|++|+
T Consensus        11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~   86 (416)
T 2pm9_A           11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS----LQVDSKFNDLDWSHNNKIIAGAL   86 (416)
T ss_dssp             EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC----CCCSSCEEEEEECSSSSCEEEEE
T ss_pred             hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE----EecCCceEEEEECCCCCeEEEEc
Confidence            344689999999987 99999          8899999999988653211111    14778999999999999999999


Q ss_pred             CCCcEEEEeCCC-----ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCce------eEEE---eeccCC
Q psy17902        210 NNSNIKLWSSSL-----EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRA------YVET---LFGHQS  274 (454)
Q Consensus       210 ~dg~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~---~~~~~~  274 (454)
                      .||.|++|++..     ..+..+..|...|.+++|+|+ +.+|++++.||.|++||+.++.      ....   +..|..
T Consensus        87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~  166 (416)
T 2pm9_A           87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD  166 (416)
T ss_dssp             SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred             cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence            999999999944     478888999999999999998 8999999999999999999876      3322   357999


Q ss_pred             ceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccc------cCCeEEEEecCC--CEEEEEeCCC---CEEEEe
Q psy17902        275 AITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGH------SRGIDMTRRVND--QQFITCGEDG---TLSLWS  341 (454)
Q Consensus       275 ~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~------~~~i~~~~~~~~--~~l~~~~~dg---~i~iwd  341 (454)
                      .|.+++|+|+ +.+|++++.|+.|++||++++... .+..+      ...+.++.+.++  .++++++.|+   .|++||
T Consensus       167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d  246 (416)
T 2pm9_A          167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD  246 (416)
T ss_dssp             CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred             CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence            9999999999 789999999999999999998877 44444      677888887764  4899999998   999999


Q ss_pred             cCCC-ccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        342 ILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       342 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      ++++ .++..+..        .|...|.+++|+| ++.+|++++.||.|++||+.+++.+..+..  |.+.|++++|+|+
T Consensus       247 ~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~v~~~~~s~~  316 (416)
T 2pm9_A          247 LRNANTPLQTLNQ--------GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA--RGNWCFKTKFAPE  316 (416)
T ss_dssp             TTSTTSCSBCCCS--------CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC--SSSCCCCEEECTT
T ss_pred             CCCCCCCcEEeec--------CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC--CCCceEEEEECCC
Confidence            9886 44444331        2455699999999 999999999999999999999999888876  7889999999999


Q ss_pred             C-CEEEEEecCCCceeeeeeeCCC
Q psy17902        420 H-KHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       420 ~-~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      + .+|+++ +.|+.|++|+.....
T Consensus       317 ~~~~l~s~-~~d~~i~iw~~~~~~  339 (416)
T 2pm9_A          317 APDLFACA-SFDNKIEVQTLQNLT  339 (416)
T ss_dssp             CTTEEEEC-CSSSEEEEEESCCCC
T ss_pred             CCCEEEEE-ecCCcEEEEEccCCC
Confidence            9 677777 899999999986544

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2e-39  Score=331.88  Aligned_cols=289  Identities=19%  Similarity=0.311  Sum_probs=253.2

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.|.+  |.+.|++++|+|++++|++|+.||.|+|||+.++.....+.      .|..+|.+++|+|++++|++|+.|
T Consensus         5 ~~~~~~~--h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d   76 (814)
T 3mkq_A            5 IKKTFSN--RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ------VTETPVRAGKFIARKNWIIVGSDD   76 (814)
T ss_dssp             CEEEEEE--ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred             cceeeec--CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe------cCCCcEEEEEEeCCCCEEEEEeCC
Confidence            4567888  99999999999999999999999999999999988777665      588899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeec-CCCEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILA-KNRVI  288 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l  288 (454)
                      |.|++|++ ++..+..+.+|...|++++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| ++.+|
T Consensus        77 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l  156 (814)
T 3mkq_A           77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF  156 (814)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred             CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence            99999999 77888899999999999999999999999999999999999887 66778889999999999999 78999


Q ss_pred             EEeeCCCcEEEeeccCCeEE-EEc-cccCCeEEEEec---CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-VFN-GHSRGIDMTRRV---NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-~~~-~~~~~i~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      ++++.||.|++||+.++... .+. .+...+.++.+.   ++.++++++.||.|++||+.++..+..+..         |
T Consensus       157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---------~  227 (814)
T 3mkq_A          157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---------H  227 (814)
T ss_dssp             EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC---------C
T ss_pred             EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC---------C
Confidence            99999999999999876654 333 343667666665   577999999999999999999988877753         3


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE-EEEecCCCceeeeeeeC
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL-VAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l-~~~~~~d~~i~~W~~~~  440 (454)
                      ...|++++|+|++++|++++.||.|++||+.+++.+..+..  +...+.+++|+|++..+ +++ +.++.+.+|+...
T Consensus       228 ~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  302 (814)
T 3mkq_A          228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIATHPTGRKNYIAS-GFDNGFTVLSLGN  302 (814)
T ss_dssp             SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC--SSSSEEEEEECTTCGGGEEEE-EETTEEEEEECSC
T ss_pred             CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec--CCCcEEEEEEccCCCceEEEE-EeCCCEEEEEcCC
Confidence            44599999999999999999999999999999988888876  67889999999999853 333 4677788888654

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.1e-40  Score=308.29  Aligned_cols=281  Identities=13%  Similarity=0.077  Sum_probs=222.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |.++|++++|+|++++|++|+.||.|++|++.++  .....+.      +|...|.+++|+|++++|++|+.||.|++||
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd   83 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS------DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE   83 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC------CCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe------cCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence            7889999999999999999999999999999987  4444444      6889999999999999999999999999999


Q ss_pred             CC-Cc---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce---eEEEeec-cCCceeEEEeecCCCEEEE
Q psy17902        219 SS-LE---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA---YVETLFG-HQSAITSLDILAKNRVISS  290 (454)
Q Consensus       219 ~~-~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~  290 (454)
                      +. +.   ....+..|...|.+++|+|++++|++++.|+.|++||+.++.   ....+.. |...|++++|+|++++|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~  163 (377)
T 3dwl_C           84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA  163 (377)
T ss_dssp             -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred             cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence            93 33   577788999999999999999999999999999999999887   3667777 9999999999999999999


Q ss_pred             eeCCCcEEEeeccC------------------CeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc----
Q psy17902        291 GGTDKSVRVWKIQE------------------ESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP----  347 (454)
Q Consensus       291 ~~~dg~i~i~d~~~------------------~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~----  347 (454)
                      ++.|+.|++||+..                  +.......|...+.++.+. ++.+|++++.||.|++||+.++..    
T Consensus       164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~  243 (377)
T 3dwl_C          164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA  243 (377)
T ss_dssp             EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred             EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence            99999999999852                  3333222788888887776 567899999999999999998877    


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc--eeeE------------------------
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR--TLEF------------------------  401 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--~~~~------------------------  401 (454)
                      +..+..         |...|.+++|+|++++|++|+.++.+ +|+.....  ....                        
T Consensus       244 ~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (377)
T 3dwl_C          244 LITVKL---------SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEG  313 (377)
T ss_dssp             CCCEEC---------SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--
T ss_pred             eEeecC---------CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccc
Confidence            444443         45569999999999999999877655 77654211  0000                        


Q ss_pred             ----------ec--------------cCCCceeeeEEEEcCCCC----EEEEEecCCCceeeeee
Q psy17902        402 ----------LQ--------------DIPLSGVINSLVFTSDHK----HLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       402 ----------~~--------------~~~~~~~v~~l~~s~d~~----~l~~~~~~d~~i~~W~~  438 (454)
                                +.              ...|.+.|+++++.+...    .|+++ |.||.|++|++
T Consensus       314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~-g~Dg~i~iWdl  377 (377)
T 3dwl_C          314 PVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSS-GTDGRVVLWTL  377 (377)
T ss_dssp             -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEE-ETTSEEEEECC
T ss_pred             ccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEee-cCCCcEEEecC
Confidence                      00              012788899999766543    47777 89999999984

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=9.1e-39  Score=301.65  Aligned_cols=279  Identities=15%  Similarity=0.191  Sum_probs=232.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      ..+....|+|++++|++|+.||.|++||+.++.....+.      .|...|.+++|+|++++|++|+.||.|++||+ ++
T Consensus        98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~  171 (420)
T 3vl1_A           98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG  171 (420)
T ss_dssp             CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred             CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence            445556789999999999999999999999887766554      68899999999999999999999999999999 67


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec---cCC---------------------cee
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG---HQS---------------------AIT  277 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~---------------------~v~  277 (454)
                      ..+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..   |..                     .+.
T Consensus       172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~  251 (420)
T 3vl1_A          172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN  251 (420)
T ss_dssp             CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred             cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence            78888999999999999999999999999999999999999998888764   333                     444


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccCCeEE-E-EccccCCeEEEEecC-CC-EEEEEeCCCCEEEEecCCCcc-ceeee
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-V-FNGHSRGIDMTRRVN-DQ-QFITCGEDGTLSLWSILKKVP-THTIP  352 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~-~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~  352 (454)
                      +++|+|++++|++++.||.|++||++++... . ...|...+.++.+.+ +. +|++++.||.|++||+.++.. +..+.
T Consensus       252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~  331 (420)
T 3vl1_A          252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL  331 (420)
T ss_dssp             TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred             ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence            4556788999999999999999999998776 3 345677888877765 44 899999999999999998754 56665


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce---------eeEeccCCCceeeeEEEEcCCCC--
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT---------LEFLQDIPLSGVINSLVFTSDHK--  421 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~---------~~~~~~~~~~~~v~~l~~s~d~~--  421 (454)
                      ..+        ...|.++.+ +++.+|++++.||.|++|++.....         ...+.  .+.+.|.+++|+|++.  
T Consensus       332 ~~~--------~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~  400 (420)
T 3vl1_A          332 INE--------GTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLV--SNDDAVSQFCYVSDDESN  400 (420)
T ss_dssp             EST--------TSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEEC--CSSCCCCEEEEECCSSSS
T ss_pred             ccC--------CCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEc--cCCcceEEEEEccCCCCc
Confidence            433        334888855 5788999999999999999987421         11222  3678899999999999  


Q ss_pred             -EEEEEecCCCceeeeeee
Q psy17902        422 -HLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       422 -~l~~~~~~d~~i~~W~~~  439 (454)
                       .|+++ |.+|.+.+|+..
T Consensus       401 g~l~a~-g~~g~~~~~~~~  418 (420)
T 3vl1_A          401 GEVLEV-GKNNFCALYNLS  418 (420)
T ss_dssp             CEEEEE-ETTTEEEEEESC
T ss_pred             ceEEEE-cCCceEEEEecc
Confidence             77777 689999999875

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.9e-38  Score=288.41  Aligned_cols=244  Identities=18%  Similarity=0.337  Sum_probs=216.9

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---  263 (454)
                      +|...|.+++|+|++++|++|+.||.|++||+ ++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.+.   
T Consensus        53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~  132 (340)
T 1got_B           53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN  132 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred             CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence            68899999999999999999999999999999 77888889999999999999999999999999999999999875   


Q ss_pred             -eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEE
Q psy17902        264 -AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLW  340 (454)
Q Consensus       264 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iw  340 (454)
                       .....+.+|...|.++.|++++. +++++.|+.|++||+.++... .+.+|...+.++.+. ++.+|++|+.|+.|++|
T Consensus       133 ~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w  211 (340)
T 1got_B          133 VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW  211 (340)
T ss_dssp             CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence             35567789999999999998765 888999999999999998877 778899999888776 46789999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      |++++.+...+..         |...|++++|+|++++|++|+.||+|++||+.++..+..+....+...|++++|+|+|
T Consensus       212 d~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g  282 (340)
T 1got_B          212 DVREGMCRQTFTG---------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG  282 (340)
T ss_dssp             ETTTCSEEEEECC---------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred             ECCCCeeEEEEcC---------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence            9999888777653         4555999999999999999999999999999988877766543345679999999999


Q ss_pred             CEEEEEecCCCceeeeeeeCCC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++|+++ +.|+.|++|+...+.
T Consensus       283 ~~l~~g-~~d~~i~vwd~~~~~  303 (340)
T 1got_B          283 RLLLAG-YDDFNCNVWDALKAD  303 (340)
T ss_dssp             SEEEEE-ETTSEEEEEETTTCC
T ss_pred             CEEEEE-CCCCeEEEEEcccCc
Confidence            999999 899999999976543

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=4.1e-38  Score=296.90  Aligned_cols=276  Identities=17%  Similarity=0.291  Sum_probs=237.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~  222 (454)
                      .++.|+||++ ++||+|. |++|+|||..+++....+..    ..|...|++++|+|+|++|++|+.||.|+|||+ +++
T Consensus       107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~----~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~  180 (420)
T 4gga_A          107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQM----EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK  180 (420)
T ss_dssp             TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEEC----CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred             cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEe----cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence            4678999975 6888775 89999999999887654432    257778999999999999999999999999999 778


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      .+..+.+|...+.+++++  +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|++.++++++.|+.|++|+
T Consensus       181 ~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~  258 (420)
T 4gga_A          181 RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP  258 (420)
T ss_dssp             EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence            889999999999998875  679999999999999998864 45677889999999999999999999999999999999


Q ss_pred             ccCCeE-----EEEccccCCeEEEEecC--CCEEEEE--eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        302 IQEESQ-----LVFNGHSRGIDMTRRVN--DQQFITC--GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       302 ~~~~~~-----~~~~~~~~~i~~~~~~~--~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      ..++..     .....|...+.++.+.+  ...++++  +.|++|++||+.++.+...+...          ..+.++.|
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~----------~~v~~~~~  328 (420)
T 4gga_A          259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH----------SQVCSILW  328 (420)
T ss_dssp             SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS----------SCEEEEEE
T ss_pred             eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc----------cceeeeee
Confidence            987653     26677888888887764  3455543  47999999999999988887643          23899999


Q ss_pred             ecCCCEEEEec--CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        373 LHNSDLVASGS--YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       373 s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +|+++.|++++  .||.|+|||+.+++++..+.+  |.+.|++++|+|||++|+++ |.|++|++|++..
T Consensus       329 ~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g--H~~~V~~l~~spdg~~l~S~-s~D~tvriWdv~~  395 (420)
T 4gga_A          329 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASA-AADETLRLWRCFE  395 (420)
T ss_dssp             ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTTEEEEECCSC
T ss_pred             cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEE-ecCCeEEEEECCC
Confidence            99999887654  799999999999999999987  88999999999999999998 8999999999754

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=2.5e-38  Score=283.96  Aligned_cols=251  Identities=16%  Similarity=0.231  Sum_probs=207.3

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCC--CcEEEEec
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANN--NELVASGD  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~  209 (454)
                      ..+.+  |.+.|++++|+|+|++||+|+.||+|+||++.+.  .....+      .+|..+|.+++|+++  +++|++|+
T Consensus         3 ~~~~~--h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l------~gH~~~V~~v~~s~~~~g~~l~s~s   74 (297)
T 2pm7_B            3 VIANA--HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL------TGHEGPVWRVDWAHPKFGTILASCS   74 (297)
T ss_dssp             EECCS--CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE------CCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred             eeccC--CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE------ccccCCeEEEEecCCCcCCEEEEEc
Confidence            35667  9999999999999999999999999999999753  223333      379999999999863  89999999


Q ss_pred             CCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEee
Q psy17902        210 NNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDIL  282 (454)
Q Consensus       210 ~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~  282 (454)
                      .||+|++||+..   ..+..+..|...|.+++|+|+  +.+|++++.|+.|++||+.++.  ....+.+|...|.+++|+
T Consensus        75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~  154 (297)
T 2pm7_B           75 YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA  154 (297)
T ss_dssp             TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred             CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence            999999999943   356677889999999999997  8899999999999999998763  235667899999999999


Q ss_pred             cC-------------CCEEEEeeCCCcEEEeeccCCe----EE-EEccccCCeEEEEecCC----CEEEEEeCCCCEEEE
Q psy17902        283 AK-------------NRVISSGGTDKSVRVWKIQEES----QL-VFNGHSRGIDMTRRVND----QQFITCGEDGTLSLW  340 (454)
Q Consensus       283 ~~-------------~~~l~~~~~dg~i~i~d~~~~~----~~-~~~~~~~~i~~~~~~~~----~~l~~~~~dg~i~iw  340 (454)
                      |+             +++|++|+.|+.|++||++++.    .. .+.+|...|.++.+.+.    .+|++++.|++|++|
T Consensus       155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW  234 (297)
T 2pm7_B          155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW  234 (297)
T ss_dssp             CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred             CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence            97             4799999999999999998764    22 67889999999988764    689999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      |+.............    ...+...|.+++|+|++++||+++.||+|+||+....
T Consensus       235 d~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~  286 (297)
T 2pm7_B          235 TQDNEQGPWKKTLLK----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  286 (297)
T ss_dssp             EESSTTSCCEEEESS----SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred             EeCCCCCccceeeee----cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence            997643211111110    0124566999999999999999999999999998643

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.7e-37  Score=295.11  Aligned_cols=285  Identities=20%  Similarity=0.325  Sum_probs=249.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.+.|.+++|+  +++|++|+.||.|++||+.++.....+.      +|...|.+++|+  +.+|++|+.|
T Consensus       151 ~~~~~~~--h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~--~~~l~s~s~d  218 (445)
T 2ovr_B          151 CLRTLVG--HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY------GHTSTVRCMHLH--EKRVVSGSRD  218 (445)
T ss_dssp             EEEECCC--CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEE--TTEEEEEETT
T ss_pred             EEEEEcC--CCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC------CCCCcEEEEEec--CCEEEEEeCC
Confidence            5667788  99999999998  4799999999999999999988777665      688899999996  5689999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      |.|++||+ ++..+..+.+|...|.+++|  ++.+|++|+.||.|++||+.+++.+..+.+|...|.++.|  ++.++++
T Consensus       219 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~  294 (445)
T 2ovr_B          219 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVS  294 (445)
T ss_dssp             SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEE
T ss_pred             CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEE
Confidence            99999999 67888899999999999999  6889999999999999999999999999999999999999  7899999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      ++.|+.|++||++++..+ .+.+|...+.++.+ +++++++++.||.|++||+.++.++..+....      .|...|++
T Consensus       295 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~v~~  367 (445)
T 2ovr_B          295 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQGPN------KHQSAVTC  367 (445)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCCSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECSTT------SCSSCEEE
T ss_pred             EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE-eCCEEEEEeCCCeEEEEECCCCcEEEEEccCC------CCCCCEEE
Confidence            999999999999998877 67778887777665 56799999999999999999998888776432      24566999


Q ss_pred             EEEecCCCEEEEecCCCcEEEEEcCCCceeeEec---cCCCceeeeEEEEcCCCCEEEEEecCCCc----eeeeeeeCCC
Q psy17902        370 VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ---DIPLSGVINSLVFTSDHKHLVAGIGTEHR----FGRWKTIKGV  442 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~~~~v~~l~~s~d~~~l~~~~~~d~~----i~~W~~~~~~  442 (454)
                      ++|+  +++|++|+.||.|++||+.+++.+..+.   ...+.+.|++++|+|++.+|+++ +.||.    |.+|+.....
T Consensus       368 ~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~dg~~~~~l~v~df~~~~  444 (445)
T 2ovr_B          368 LQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG-SRNGTEETKLLVLDFDVDM  444 (445)
T ss_dssp             EEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEE-CSSSSSCCEEEEEECCCCC
T ss_pred             EEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEc-ccCCCCccEEEEEECCCCC
Confidence            9995  5799999999999999999998887772   12478899999999999999988 78887    9999986543

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=2.8e-38  Score=337.42  Aligned_cols=289  Identities=16%  Similarity=0.287  Sum_probs=253.8

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .....+.+  |.+.|++++|+|++++|++|+.||.|++||+.++.....+.      +|...|.+++|+|++++|++|+.
T Consensus       606 ~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~~~  677 (1249)
T 3sfz_A          606 LSRLVVRP--HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK------AHEDEVLCCAFSSDDSYIATCSA  677 (1249)
T ss_dssp             CCSEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEET
T ss_pred             cceEEEec--ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec------cCCCCEEEEEEecCCCEEEEEeC
Confidence            34456777  99999999999999999999999999999999998877766      68899999999999999999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      ||.|++||+ ++..+..+.+|...|.+++|+|  ++.++++|+.||.|++||+.++.++..+.+|...|++++|+|++++
T Consensus       678 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~  757 (1249)
T 3sfz_A          678 DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL  757 (1249)
T ss_dssp             TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE
T ss_pred             CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE
Confidence            999999999 7888899999999999999999  5568999999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEEEEcc--------------ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        288 ISSGGTDKSVRVWKIQEESQLVFNG--------------HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~~~~~--------------~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      |++++.||.|++||+.++.......              ....+.++.+.+ +..+++++ ++.+.+||+.++.....+.
T Consensus       758 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~  836 (1249)
T 3sfz_A          758 LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIH  836 (1249)
T ss_dssp             EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEE
T ss_pred             EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEc
Confidence            9999999999999999887652211              112344555554 55555555 7899999999998887775


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                      ..        |...|.+++|+|++.++++++.||.|++|++.++..+..+..  |.+.|++++|+|+|++|+++ +.|+.
T Consensus       837 ~~--------~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~-s~dg~  905 (1249)
T 3sfz_A          837 TG--------HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTA-SDDQT  905 (1249)
T ss_dssp             CS--------SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSC
T ss_pred             CC--------CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEE-eCCCe
Confidence            43        345599999999999999999999999999999988888876  88999999999999999998 89999


Q ss_pred             eeeeeee
Q psy17902        433 FGRWKTI  439 (454)
Q Consensus       433 i~~W~~~  439 (454)
                      |++|+..
T Consensus       906 v~vw~~~  912 (1249)
T 3sfz_A          906 IRVWETK  912 (1249)
T ss_dssp             EEEEEHH
T ss_pred             EEEEEcc
Confidence            9999964

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=3.5e-38  Score=289.16  Aligned_cols=256  Identities=19%  Similarity=0.254  Sum_probs=212.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |...|++++|+|++.+|++|+.||+|++||+.++.....+.      +|...|.+++|+|++++|++|+.|
T Consensus        68 ~~~~l~~--h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~------~h~~~v~~v~~sp~~~~l~s~~~d  139 (343)
T 2xzm_R           68 PHKALTG--HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV------GHQSEVYSVAFSPDNRQILSAGAE  139 (343)
T ss_dssp             EEEEECC--CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE------CCCSCEEEEEECSSTTEEEEEETT
T ss_pred             ccchhcc--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc------CCCCcEEEEEECCCCCEEEEEcCC
Confidence            4567888  99999999999999999999999999999999988776654      688899999999999999999999


Q ss_pred             CcEEEEeCCCccEEeec---ccCCCeEEEEEcCCC----------CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeE
Q psy17902        212 SNIKLWSSSLEHLHTFT---GHKAPITGLAISFEC----------DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITS  278 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~  278 (454)
                      +.|++||+.+.......   .|...|.+++|+|++          .+|++++.||.|++||. .......+.+|...|++
T Consensus       140 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~  218 (343)
T 2xzm_R          140 REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNH  218 (343)
T ss_dssp             SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEE
T ss_pred             CEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceE
Confidence            99999999655554443   789999999999986          78999999999999994 46667788899999999


Q ss_pred             EEeecCCCEEEEeeCCCcEEEeeccCCe-EEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce--eeeccc
Q psy17902        279 LDILAKNRVISSGGTDKSVRVWKIQEES-QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH--TIPVAH  355 (454)
Q Consensus       279 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~  355 (454)
                      ++|+|++++|++|+.||.|++||+.... ......+...+.++.+.++..+++++.|+.|++|++.++....  .+....
T Consensus       219 ~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~  298 (343)
T 2xzm_R          219 LSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEP  298 (343)
T ss_dssp             EEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCS
T ss_pred             EEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCc
Confidence            9999999999999999999999995433 3333345566888888877777778889999999998776554  222110


Q ss_pred             --CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        356 --GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       356 --~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                        .......|...|.+++|+|+|++|++|+.||+|++|++.++
T Consensus       299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g  341 (343)
T 2xzm_R          299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS  341 (343)
T ss_dssp             GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred             chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence              01111245667999999999999999999999999998654

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.5e-38  Score=291.87  Aligned_cols=307  Identities=12%  Similarity=0.180  Sum_probs=239.3

Q ss_pred             CceeEeEeccCCCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCC-Ccee-cccCCcccCCCCCCceEEEEEeCCCc
Q psy17902        129 ATVVCTKFNGKPHRASITCIAVTSD---SKHVYSACKDGIIIKWLLET-RSKV-CSSPFVKTDRKSYPPILALAVANNNE  203 (454)
Q Consensus       129 ~~~~~~~~~~~~h~~~V~~~~~s~~---~~~l~~~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~  203 (454)
                      +......+.+  |.+.|++++|+|+   |++|++|+.||.|++||+.+ +... ..+.      +|...|.+++|+|+++
T Consensus        28 ~~~~~~~~~~--h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~   99 (368)
T 3mmy_A           28 PMKDIEVTSS--PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ------MHTGPVLDVCWSDDGS   99 (368)
T ss_dssp             TTCCEECSSC--CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE------ECSSCEEEEEECTTSS
T ss_pred             CcceeEeccC--CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec------cccCCEEEEEECcCCC
Confidence            3446677888  9999999999999   69999999999999999987 4333 2222      5888999999999999


Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEE--cCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAI--SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  281 (454)
                      +|++++.||.|++||+.......+..|...|.+++|  ++++.+|++++.||.|++||+.+++.+..+..+. .+.++.+
T Consensus       100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~  178 (368)
T 3mmy_A          100 KVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADV  178 (368)
T ss_dssp             EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEE
T ss_pred             EEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEe
Confidence            999999999999999966666667889999999999  8899999999999999999999999888887654 5666666


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEEEE---ccccCCeEEEEec-CC----CEEEEEeCCCCEEEEecCCC---cccee
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQLVF---NGHSRGIDMTRRV-ND----QQFITCGEDGTLSLWSILKK---VPTHT  350 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~i~~~~~~-~~----~~l~~~~~dg~i~iwd~~~~---~~~~~  350 (454)
                      .  ...+++++.++.+.+|+++.......   ..+.....++.+. ..    ..+++++.||.|++|++...   .....
T Consensus       179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~  256 (368)
T 3mmy_A          179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT  256 (368)
T ss_dssp             E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred             c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence            5  45788889999999999987655421   1122333333322 22    23999999999999999887   44555


Q ss_pred             eecccCCC---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        351 IPVAHGYD---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       351 ~~~~~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      +..+....   ....|...|++++|+|++++|++|+.||.|++||+.+++.+..+..  |..+|++++|+|+|++|+++ 
T Consensus       257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~-  333 (368)
T 3mmy_A          257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ--LDQPISACCFNHNGNIFAYA-  333 (368)
T ss_dssp             EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--CSSCEEEEEECTTSSCEEEE-
T ss_pred             eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC--CCCCceEEEECCCCCeEEEE-
Confidence            54332210   0111223599999999999999999999999999999998888876  78899999999999999999 


Q ss_pred             cCCCceeeeeeeC-CCeeEEEEE
Q psy17902        428 GTEHRFGRWKTIK-GVKNTVAII  449 (454)
Q Consensus       428 ~~d~~i~~W~~~~-~~~~~~~~~  449 (454)
                      +.|+....|+... .....+.+.
T Consensus       334 s~d~~~~~~~~~~~~~~~~i~~~  356 (368)
T 3mmy_A          334 SSYDWSKGHEFYNPQKKNYIFLR  356 (368)
T ss_dssp             ECCCSTTCGGGCCTTSCCEEEEE
T ss_pred             ecccccccccccCCCccceeeeh
Confidence            5666655555432 223444443

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-38  Score=287.57  Aligned_cols=247  Identities=19%  Similarity=0.297  Sum_probs=195.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |...|.+++|+|++++|++|+.|+.|+||++...... ..........+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus        57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~  136 (330)
T 2hes_X           57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET  136 (330)
T ss_dssp             CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred             ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence            9999999999999999999999999999998642210 000111122368899999999999999999999999999998


Q ss_pred             -CC----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc--eeEEEeeccCCceeEEEeecC--CCEEEE
Q psy17902        220 -SL----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--AYVETLFGHQSAITSLDILAK--NRVISS  290 (454)
Q Consensus       220 -~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~  290 (454)
                       ..    ..+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++  .++..+.+|...|.+++|+|+  +.+|++
T Consensus       137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s  216 (330)
T 2hes_X          137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS  216 (330)
T ss_dssp             CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred             cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence             32    346678899999999999999999999999999999998766  677888999999999999998  678999


Q ss_pred             eeCCCcEEEeeccCC--------eEE-EEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc--ceeeecccCCC
Q psy17902        291 GGTDKSVRVWKIQEE--------SQL-VFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP--THTIPVAHGYD  358 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~--------~~~-~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~  358 (454)
                      |+.|++|++||+..+        ... .+.. |...+.++.+.++..|++++.||.|++|+..++..  ......     
T Consensus       217 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~-----  291 (330)
T 2hes_X          217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRAL-----  291 (330)
T ss_dssp             EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESC-----
T ss_pred             EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecccc-----
Confidence            999999999999764        222 3333 78889999998888999999999999999876632  222211     


Q ss_pred             CCCCCCC-cEEEEEEec--CCCEEEEecCCCcEEEEEcCC
Q psy17902        359 SSSSEPN-WITSVACLH--NSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       359 ~~~~~~~-~i~~~~~s~--~~~~l~~~~~dg~v~iwd~~~  395 (454)
                         .|.. .|.+++|+|  ++++|++|+.||+|+||++..
T Consensus       292 ---~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~  328 (330)
T 2hes_X          292 ---CHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK  328 (330)
T ss_dssp             ---TTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred             ---ccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence               1333 599999999  688999999999999999864

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.3e-38  Score=291.29  Aligned_cols=281  Identities=17%  Similarity=0.264  Sum_probs=237.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |.+.|.+++|+|+|++++++..++.+.+|............      .|...|.+++|+|++++|++++ ||.|++|++.
T Consensus         8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~   80 (337)
T 1gxr_A            8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL------NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS   80 (337)
T ss_dssp             EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE------CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred             cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceec------cCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence            66789999999999999998888777666544332222211      5888999999999999999999 9999999993


Q ss_pred             -Cc---cEEeec--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902        221 -LE---HLHTFT--GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       221 -~~---~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                       ..   .+..+.  .|...|.+++|+|++++|++++.||.|++||+.+++  ....+..|...|.+++|+|++++|++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~  160 (337)
T 1gxr_A           81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC  160 (337)
T ss_dssp             STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence             22   223333  799999999999999999999999999999999887  5667788999999999999999999999


Q ss_pred             CCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      .||.|++||++++... .+..|...+.++.+. ++.+|++++.||.|++||+.++..+..+..          ...+.++
T Consensus       161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----------~~~v~~~  230 (337)
T 1gxr_A          161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF----------TSQIFSL  230 (337)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC----------SSCEEEE
T ss_pred             CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC----------CCceEEE
Confidence            9999999999998877 677788888887776 567899999999999999999888777642          3449999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|+|++++|++++.+|.|++|++.++.... +.  .|...|.+++|+|++++|+++ +.|+.|++|+...+.
T Consensus       231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~  298 (337)
T 1gxr_A          231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH--LHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGA  298 (337)
T ss_dssp             EECTTSSEEEEEETTSCEEEEETTSSCEEE-EC--CCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC
T ss_pred             EECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec--CCccceeEEEECCCCCEEEEe-cCCCcEEEEECCCCe
Confidence            999999999999999999999999876543 33  378899999999999999988 789999999987654

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=2.5e-37  Score=280.41  Aligned_cols=275  Identities=17%  Similarity=0.279  Sum_probs=230.8

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCcc
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEH  223 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~  223 (454)
                      +++|+||+++ +||+|. |++|+|||+.+++....+..    ..|...|.+++|+|++++|++|+.||.|++|++ +++.
T Consensus        28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~----~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~  101 (318)
T 4ggc_A           28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQM----EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR  101 (318)
T ss_dssp             CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEEC----CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred             ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEe----cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence            5789999875 777764 89999999999887765432    257788999999999999999999999999999 7788


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                      +..+.+|...+.++.+  ++..+++++.++.+++|+.... ..+..+.+|...+.++.+++++++|++++.|+.|++||+
T Consensus       102 ~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~  179 (318)
T 4ggc_A          102 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS  179 (318)
T ss_dssp             EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred             EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence            8899999998887665  4679999999999999998876 445677899999999999999999999999999999999


Q ss_pred             cCCeEE-----EEccccCCeEEEEecC-C-CEE--EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        303 QEESQL-----VFNGHSRGIDMTRRVN-D-QQF--ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       303 ~~~~~~-----~~~~~~~~i~~~~~~~-~-~~l--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      ++++..     ....+...+..+.+.+ + ..+  ++++.++.|++||............          ...+..+.|+
T Consensus       180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~----------~~~v~~~~~~  249 (318)
T 4ggc_A          180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----------HSQVCSILWS  249 (318)
T ss_dssp             SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC----------SSCEEEEEEE
T ss_pred             CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc----------eeeeeeeeec
Confidence            875432     5556667777666654 2 333  3566889999999988877665542          3339999999


Q ss_pred             cCCCEEEEe--cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        374 HNSDLVASG--SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       374 ~~~~~l~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |++..++++  +.||.|++||+.+++++..+.+  |.+.|++++|+|||++|+++ |.|+.|++|+...
T Consensus       250 ~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~-s~D~~v~iWd~~~  315 (318)
T 4ggc_A          250 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASA-AADETLRLWRCFE  315 (318)
T ss_dssp             TTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTTEEEEECCSC
T ss_pred             ccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEE-ecCCeEEEEECCC
Confidence            999977664  4799999999999999999987  88999999999999999998 8999999999754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.4e-37  Score=295.77  Aligned_cols=281  Identities=16%  Similarity=0.280  Sum_probs=242.9

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe--CCCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA--NNNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~  209 (454)
                      ....+.+  |.+.|++++|+|++ +|++|+.||.|++||+.++.....+.      +|...|.+++|+  +++.+|++|+
T Consensus       154 ~~~~~~~--h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~~l~s~s  224 (464)
T 3v7d_B          154 FLLQLSG--HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE------GHNSTVRCLDIVEYKNIKYIVTGS  224 (464)
T ss_dssp             EEEEECC--CSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEEESSSCEEEEEEE
T ss_pred             EEEEEeC--CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC------CCCCccEEEEEecCCCCCEEEEEc
Confidence            5667788  99999999999987 99999999999999999988777665      688999999998  5789999999


Q ss_pred             CCCcEEEEeCCCc------------------------cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902        210 NNSNIKLWSSSLE------------------------HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY  265 (454)
Q Consensus       210 ~dg~v~vw~~~~~------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  265 (454)
                      .||.|++||+...                        .+..+.+|...|.++  ++++++|++|+.||.|++||+.+++.
T Consensus       225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~  302 (464)
T 3v7d_B          225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC  302 (464)
T ss_dssp             TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE
T ss_pred             CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE
Confidence            9999999998332                        155677899998877  56789999999999999999999999


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      +..+.+|...|.+++|+|++++|++|+.||.|++||++++..+ .+.+|...+.++.+. +.+|++++.||.|++||+.+
T Consensus       303 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~  381 (464)
T 3v7d_B          303 LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-DKFLVSAAADGSIRGWDAND  381 (464)
T ss_dssp             EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSEEEEEETTT
T ss_pred             EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-CCEEEEEeCCCcEEEEECCC
Confidence            9999999999999999999999999999999999999998887 778899999888876 68999999999999999998


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                      .........          ...+..++|+|++.+|++|+ ||.|++||+.+++.+..+.. .+.+.|.+++|+  +..++
T Consensus       382 ~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~-~~~~~v~~v~~~--~~~l~  447 (464)
T 3v7d_B          382 YSRKFSYHH----------TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANIL-KDADQIWSVNFK--GKTLV  447 (464)
T ss_dssp             CCEEEEEEC----------TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTT-TTCSEEEEEEEE--TTEEE
T ss_pred             CceeeeecC----------CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhc-cCCCcEEEEEec--CCEEE
Confidence            776655532          23377889999999999998 89999999999988875332 378899999997  66777


Q ss_pred             EEecCCCceeeeee
Q psy17902        425 AGIGTEHRFGRWKT  438 (454)
Q Consensus       425 ~~~~~d~~i~~W~~  438 (454)
                      ++++.++.+.+|-.
T Consensus       448 ~~~~~~g~~~i~~l  461 (464)
T 3v7d_B          448 AAVEKDGQSFLEIL  461 (464)
T ss_dssp             EEEEETTEEEEEEE
T ss_pred             EEEEeCCeEEEEEe
Confidence            77677877766643

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=4.2e-38  Score=282.49  Aligned_cols=247  Identities=17%  Similarity=0.322  Sum_probs=206.1

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~  262 (454)
                      +|...|.+++|+|+|++||+|+.|+.|+||++.   ...+..+.+|.++|++++|+++  +++|++|+.|++|++||+.+
T Consensus         7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~   86 (297)
T 2pm7_B            7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN   86 (297)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred             CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence            688999999999999999999999999999983   3567889999999999999863  89999999999999999987


Q ss_pred             ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecCC----------
Q psy17902        263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVND----------  325 (454)
Q Consensus       263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~~----------  325 (454)
                      +.  .+..+.+|...|.+++|+|+  +.+|++++.|+.|++||++...   ...+.+|...+.++.+.+.          
T Consensus        87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~  166 (297)
T 2pm7_B           87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG  166 (297)
T ss_dssp             SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred             CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence            74  45667789999999999997  7899999999999999998753   3467788888988887753          


Q ss_pred             ----CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC---CEEEEecCCCcEEEEEcCCCc-
Q psy17902        326 ----QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS---DLVASGSYDGCVKLWKITPKR-  397 (454)
Q Consensus       326 ----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~-  397 (454)
                          .+|++|+.|+.|++||+.++.........     ...|..+|.+++|+|++   .+|++|+.|++|+|||+.... 
T Consensus       167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~-----l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~  241 (297)
T 2pm7_B          167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-----LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG  241 (297)
T ss_dssp             ---CCEEEEEETTSCEEEEEEETTTTEEEEEEE-----ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred             CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE-----ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence                58999999999999999876532211100     01356679999999985   799999999999999998753 


Q ss_pred             --eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        398 --TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       398 --~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                        ....+....+...|.+++|+|+|++|+++ +.|+.|++|+...
T Consensus       242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~-~~D~~v~lw~~~~  285 (297)
T 2pm7_B          242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENL  285 (297)
T ss_dssp             CCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ETTSCEEEEEECT
T ss_pred             ccceeeeecccCCCcEEEEEECCCCCEEEEE-cCCCcEEEEEECC
Confidence              12233223467889999999999999998 8899999999764

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=6.2e-39  Score=296.11  Aligned_cols=289  Identities=12%  Similarity=0.054  Sum_probs=216.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCC-------eEEEEEcCCCceecccCC----cccCCCCCCceEEEEEeCCCcEEEEe--
Q psy17902        142 RASITCIAVTSDSKHVYSACKDG-------IIIKWLLETRSKVCSSPF----VKTDRKSYPPILALAVANNNELVASG--  208 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~--  208 (454)
                      .-+|+|++|+|++++|++|+.+.       .|++|++...........    ......+...|.+++++  +..+++|  
T Consensus        14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~   91 (365)
T 4h5i_A           14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN   91 (365)
T ss_dssp             SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred             CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence            35799999999999999997543       599999876543221110    01123566778887765  4456655  


Q ss_pred             ---------cCCCcEEEEeC-CCc-cEEe--------ecccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEE
Q psy17902        209 ---------DNNSNIKLWSS-SLE-HLHT--------FTGHKAPITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVE  267 (454)
Q Consensus       209 ---------~~dg~v~vw~~-~~~-~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~  267 (454)
                               +.|+.+++|++ ... .+..        ...+...+.+++|+|||++|++++  .|++|+|||+.+++.+.
T Consensus        92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~  171 (365)
T 4h5i_A           92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF  171 (365)
T ss_dssp             CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred             CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence                     45778999997 222 2211        123455689999999999987654  68999999999999988


Q ss_pred             EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEec-CCCEEEEEeCCC----CEEE
Q psy17902        268 TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRV-NDQQFITCGEDG----TLSL  339 (454)
Q Consensus       268 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~-~~~~l~~~~~dg----~i~i  339 (454)
                      .+. |...|.+++|+|++++|++++.+ .+.+|+..++...   ....|...+..+.+. ++..+++++.++    .+++
T Consensus       172 ~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~  249 (365)
T 4h5i_A          172 EIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK  249 (365)
T ss_dssp             EEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred             EeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence            875 78889999999999999998855 5666666666554   334566677766654 567888888776    5888


Q ss_pred             EecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe-ccCCCceeeeEEEEc
Q psy17902        340 WSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL-QDIPLSGVINSLVFT  417 (454)
Q Consensus       340 wd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s  417 (454)
                      |++.......... ...      .|...|++++|+|+|++||+|+.|++|+|||+.+++++..+ ..  |.++|++|+||
T Consensus       250 ~~~~~~~~~~~~~~~~~------~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g--H~~~V~~v~fS  321 (365)
T 4h5i_A          250 ISIKSGNTSVLRSKQVT------NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA--HSFAITEVTIS  321 (365)
T ss_dssp             EEEETTEEEEEEEEEEE------SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS--SSSCEEEEEEC
T ss_pred             cccccceecceeeeeec------CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc--ccCCEEEEEEC
Confidence            9887654322111 111      24556999999999999999999999999999999888775 44  89999999999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      |||++||++ +.|++|++|++.....
T Consensus       322 pdg~~laS~-S~D~tvrvw~ip~~~~  346 (365)
T 4h5i_A          322 PDSTYVASV-SAANTIHIIKLPLNYA  346 (365)
T ss_dssp             TTSCEEEEE-ETTSEEEEEECCTTTT
T ss_pred             CCCCEEEEE-eCCCeEEEEEcCCCCc
Confidence            999999999 8999999999865543

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1.2e-37  Score=292.59  Aligned_cols=301  Identities=12%  Similarity=0.204  Sum_probs=240.5

Q ss_pred             EeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCc-------ccCCCCCCceEEEEEeC-CCc
Q psy17902        133 CTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFV-------KTDRKSYPPILALAVAN-NNE  203 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~-~~~  203 (454)
                      ...+.+  |.+.|++++|+| ++++|++|+.||.|++||+.++.........       ....+|...|.+++|+| ++.
T Consensus        36 ~~~~~~--h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  113 (408)
T 4a11_B           36 RDVERI--HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG  113 (408)
T ss_dssp             EEECCC--CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred             eeeeec--cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence            456677  999999999999 9999999999999999999987655443210       01124888999999999 788


Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      +|++++.||.|++||+..........+...+.++.|++.   +.++++++.+|.|++||+.++..+..+.+|...|++++
T Consensus       114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~  193 (408)
T 4a11_B          114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS  193 (408)
T ss_dssp             CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred             EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence            999999999999999954444444448889999999985   45999999999999999999999999999999999999


Q ss_pred             eecCCC-EEEEeeCCCcEEEeeccCCeEE--EE---------------ccccCCeEEEEec-CCCEEEEEeCCCCEEEEe
Q psy17902        281 ILAKNR-VISSGGTDKSVRVWKIQEESQL--VF---------------NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       281 ~~~~~~-~l~~~~~dg~i~i~d~~~~~~~--~~---------------~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd  341 (454)
                      |+|++. +|++++.||.|++||++.....  .+               ..|...+.++.+. ++.+|++++.||.|++||
T Consensus       194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd  273 (408)
T 4a11_B          194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN  273 (408)
T ss_dssp             ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence            999998 5899999999999999876522  22               4677778777766 567899999999999999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      +.++.............    ....+........+..+++++.++.|++||+.++..+..+..  |.+.|++++|+|+++
T Consensus       274 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~  347 (408)
T 4a11_B          274 SSNGENTLVNYGKVCNN----SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNFQ  347 (408)
T ss_dssp             TTTCCBCCCCCCCCCCC----CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTTT
T ss_pred             CCCCccceecccccccc----ccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCCC
Confidence            99887655443221111    111122222233445677778899999999999999988886  889999999999999


Q ss_pred             EEEEEecCCCceeeeeeeCCC
Q psy17902        422 HLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       422 ~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|+++ +.||.|++|+.....
T Consensus       348 ~l~s~-~~dg~i~iw~~~~~~  367 (408)
T 4a11_B          348 ELYSG-SRDCNILAWVPSLYE  367 (408)
T ss_dssp             EEEEE-ETTSCEEEEEECC--
T ss_pred             EEEEE-CCCCeEEEEeCCCCC
Confidence            99988 899999999987653

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=1.5e-38  Score=292.73  Aligned_cols=248  Identities=16%  Similarity=0.217  Sum_probs=203.8

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ....+  |...|++++|+|++. +++++.||+|+|||+.+++.......  ...+|...|.+++|+|++++|++|+.||.
T Consensus        88 ~~~~~--~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~--~~~~h~~~V~~v~~spdg~~l~sgs~dg~  162 (357)
T 4g56_B           88 TAGVQ--TEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKF--AKYEHDDIVKTLSVFSDGTQAVSGGKDFS  162 (357)
T ss_dssp             SEEEE--CSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCE--EECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred             cccCC--CCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEee--ccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence            33445  999999999999975 55678899999999988765443322  12358889999999999999999999999


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEe--eccCCceeEEEeecCC-CEE
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILAKN-RVI  288 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l  288 (454)
                      |++||+ ++..+..+..|...|++++|++++. ++++++.||.|++||+++++.+..+  ..|...+++++|+|++ .+|
T Consensus       163 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l  242 (357)
T 4g56_B          163 VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF  242 (357)
T ss_dssp             EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence            999999 7778889999999999999999874 7899999999999999998876554  3567789999999985 688


Q ss_pred             EEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      ++|+.|+.|++||+++++.. .+.+|...+.++.+.+ + .+|++++.|++|+|||+.+++.+..+          .|..
T Consensus       243 a~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----------~H~~  312 (357)
T 4g56_B          243 ACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----------SHRD  312 (357)
T ss_dssp             EEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----------CCSS
T ss_pred             EEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----------CCCC
Confidence            99999999999999988766 7888999999888764 3 47889999999999999988776554          2566


Q ss_pred             cEEEEEEec-CCCEEEEecCCCcEEEEEcCCC
Q psy17902        366 WITSVACLH-NSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       366 ~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      .|++++|+| ++.+|++|+.||+|++|++.+.
T Consensus       313 ~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~  344 (357)
T 4g56_B          313 FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE  344 (357)
T ss_dssp             CEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred             CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence            699999998 7899999999999999999754

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=2.3e-37  Score=295.96  Aligned_cols=282  Identities=20%  Similarity=0.357  Sum_probs=243.5

Q ss_pred             eEeEeccCCCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASI-TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ....+.+  |...| .|+.+  ++++|++|+.||.|++||+.+++....+.      +|...|.+++|++++ +|++|+.
T Consensus       113 ~~~~l~~--h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~------~h~~~V~~l~~~~~~-~l~s~s~  181 (464)
T 3v7d_B          113 QRTTLRG--HMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLS------GHDGGVWALKYAHGG-ILVSGST  181 (464)
T ss_dssp             EEEEEEC--CSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECSTT-EEEEEET
T ss_pred             ceEEEcC--CCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEe------CCCcCEEEEEEcCCC-EEEEEeC
Confidence            5667888  99885 66666  45899999999999999999988877766      699999999999988 8999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeCCCcee----------------------
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAIS--FECDTLYSSSNDRSIKVWNIEDRAY----------------------  265 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~----------------------  265 (454)
                      ||.|++||+ ++..+..+.+|...|.+++|+  +++.+|++|+.||.|++||+.++..                      
T Consensus       182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (464)
T 3v7d_B          182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY  261 (464)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred             CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence            999999999 777888999999999999998  5778999999999999999987652                      


Q ss_pred             -EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902        266 -VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       266 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~  342 (454)
                       +..+.+|...|.++  ++++++|++++.||.|++||++++..+ .+.+|...+.++.+. ++..+++++.||.|++||+
T Consensus       262 ~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~  339 (464)
T 3v7d_B          262 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL  339 (464)
T ss_dssp             EEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             EEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence             45667888888877  567899999999999999999998877 777888889877776 5679999999999999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                      .++.++..+..         |...|.++.|+  +.+|++|+.||.|++||+.++.......   +...+..++|+|++.+
T Consensus       340 ~~~~~~~~~~~---------h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~  405 (464)
T 3v7d_B          340 ENGELMYTLQG---------HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNI  405 (464)
T ss_dssp             TTTEEEEEECC---------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSE
T ss_pred             CCCcEEEEEeC---------CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCE
Confidence            99988887753         45559999997  5799999999999999999887665554   5667888999999999


Q ss_pred             EEEEecCCCceeeeeeeCCC
Q psy17902        423 LVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |+++ + |+.|++|+..++.
T Consensus       406 l~~~-~-dg~i~iwd~~~g~  423 (464)
T 3v7d_B          406 LVSG-S-ENQFNIYNLRSGK  423 (464)
T ss_dssp             EEEE-E-TTEEEEEETTTCC
T ss_pred             EEEe-c-CCeEEEEECCCCc
Confidence            9988 4 8999999987654

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.8e-38  Score=302.02  Aligned_cols=294  Identities=14%  Similarity=0.206  Sum_probs=223.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec-----ccCCcccCCCCC------------CceEEEEEeCCC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC-----SSPFVKTDRKSY------------PPILALAVANNN-  202 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~------------~~v~~~~~~~~~-  202 (454)
                      |.+.|++++|+|++++||+|+.||.|+||++.++....     .+.......+|.            ..|.+++|+|++ 
T Consensus        27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~  106 (447)
T 3dw8_B           27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN  106 (447)
T ss_dssp             GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred             ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence            78899999999999999999999999999998765200     000111112566            789999999998 


Q ss_pred             -cEEEEecCCCcEEEEeCCCccE----------------------------------------Ee-ecccCCCeEEEEEc
Q psy17902        203 -ELVASGDNNSNIKLWSSSLEHL----------------------------------------HT-FTGHKAPITGLAIS  240 (454)
Q Consensus       203 -~~l~~~~~dg~v~vw~~~~~~~----------------------------------------~~-~~~~~~~v~~~~~~  240 (454)
                       .+|++++.||.|++|++.....                                        .. ..+|...|.+++|+
T Consensus       107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~  186 (447)
T 3dw8_B          107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN  186 (447)
T ss_dssp             SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred             cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence             7999999999999999832111                                        12 36799999999999


Q ss_pred             CCCCEEEEEeCCCcEEEEeCCC-ceeEE-------EeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeE----
Q psy17902        241 FECDTLYSSSNDRSIKVWNIED-RAYVE-------TLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQ----  307 (454)
Q Consensus       241 ~~~~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~----  307 (454)
                      |++++|++| .|+.|++||+.+ +..+.       .+.+|...|++++|+|++ ++|++|+.||.|++||++++..    
T Consensus       187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  265 (447)
T 3dw8_B          187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH  265 (447)
T ss_dssp             TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred             CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence            999999998 799999999994 44443       255899999999999998 9999999999999999998875    


Q ss_pred             -EEEccccC------------CeEEEEec-CCCEEEEEeCCCCEEEEecCC-CccceeeecccCCCCC------CCCCCc
Q psy17902        308 -LVFNGHSR------------GIDMTRRV-NDQQFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSS------SSEPNW  366 (454)
Q Consensus       308 -~~~~~~~~------------~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~------~~~~~~  366 (454)
                       ..+..|..            .+.++.+. ++.+|++++. +.|++||+.+ +.++..+..+......      ......
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~  344 (447)
T 3dw8_B          266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD  344 (447)
T ss_dssp             CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred             eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence             46666664            78777766 4667888888 9999999997 7777777654321100      000001


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec------------------------------cCCCceeeeEEEE
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ------------------------------DIPLSGVINSLVF  416 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~------------------------------~~~~~~~v~~l~~  416 (454)
                      +..++|+|++.+|++|+.||.|++||+.+++.+....                              .......|..++|
T Consensus       345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  424 (447)
T 3dw8_B          345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW  424 (447)
T ss_dssp             CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred             ceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence            3359999999999999999999999999886653211                              1124567899999


Q ss_pred             cCCCCEEEEEecCCCceeeeee
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +|++.+|+++ +.+ .+++|..
T Consensus       425 ~p~~~~la~~-~~~-~~~~~~~  444 (447)
T 3dw8_B          425 HPKENIIAVA-TTN-NLYIFQD  444 (447)
T ss_dssp             CSSSSEEEEE-CSS-CEEEEEC
T ss_pred             CCCCCEEEEE-ecc-eeeeecc
Confidence            9999999988 444 4777753

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.1e-37  Score=286.74  Aligned_cols=245  Identities=16%  Similarity=0.260  Sum_probs=217.6

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---  263 (454)
                      +|...|++++|+|++.+|++|+.||.|+|||. .+.....+..|...|.+++|+|++.+|++|+.|+.+++|++...   
T Consensus        62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~  141 (354)
T 2pbi_B           62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE  141 (354)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred             CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence            68899999999999999999999999999998 77778888889999999999999999999999999999998643   


Q ss_pred             ---eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC---CCEEEEEeCCCC
Q psy17902        264 ---AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN---DQQFITCGEDGT  336 (454)
Q Consensus       264 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~---~~~l~~~~~dg~  336 (454)
                         .....+.+|...|.+++|+|++..|++++.|++|++||+.+++.+ .+.+|...+.++.+.+   +.+|++|+.||.
T Consensus       142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~  221 (354)
T 2pbi_B          142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK  221 (354)
T ss_dssp             CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred             cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence               234566789999999999999999999999999999999998877 7788999998877653   579999999999


Q ss_pred             EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      |++||++++.++..+..         |...|++++|+|++.+|++|+.|++|++||+..+..+..+....+...+++++|
T Consensus       222 v~~wd~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~  292 (354)
T 2pbi_B          222 AMVWDMRSGQCVQAFET---------HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF  292 (354)
T ss_dssp             EEEEETTTCCEEEEECC---------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred             EEEEECCCCcEEEEecC---------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence            99999999988877653         455699999999999999999999999999998877776665444567899999


Q ss_pred             cCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|+|.+|+++ +.|+.|++|+...+.
T Consensus       293 s~~g~~l~~g-~~d~~i~vwd~~~~~  317 (354)
T 2pbi_B          293 SLSGRLLFAG-YNDYTINVWDVLKGS  317 (354)
T ss_dssp             CTTSSEEEEE-ETTSCEEEEETTTCS
T ss_pred             eCCCCEEEEE-ECCCcEEEEECCCCc
Confidence            9999999998 899999999986654

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=6.2e-38  Score=297.19  Aligned_cols=272  Identities=23%  Similarity=0.455  Sum_probs=236.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      |...|+|++|  ++++|++|+.||.|++||+.++.....+.      +|...|.+++|  ++++|++|+.||.|++||+ 
T Consensus       132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~  201 (435)
T 1p22_A          132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT------GHTGSVLCLQY--DERVIITGSSDSTVRVWDVN  201 (435)
T ss_dssp             SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC------CCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred             CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEc------CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence            7788999987  78999999999999999999988777665      68889999998  7889999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE---EEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV---ETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      ++..+..+..|...|.+++|+  +.+|++|+.||.|++||+.++..+   ..+.+|...|.+++|  ++++|++|+.||.
T Consensus       202 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~  277 (435)
T 1p22_A          202 TGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT  277 (435)
T ss_dssp             SCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred             CCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence            778888999999999999997  459999999999999999887655   567789999999999  6889999999999


Q ss_pred             EEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        297 VRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       297 i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      |++||++++..+ .+.+|...+.++.+ ++.++++|+.||.|++||+.++.++..+..         |...|.+++|  +
T Consensus       278 i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---------h~~~v~~~~~--~  345 (435)
T 1p22_A          278 IKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG---------HEELVRCIRF--D  345 (435)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECC---------CSSCEEEEEC--C
T ss_pred             EEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCCCCEEEEEeC---------CcCcEEEEEe--c
Confidence            999999998877 77788888988877 578999999999999999999988887753         4455999999  7


Q ss_pred             CCEEEEecCCCcEEEEEcCCCc---------eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        376 SDLVASGSYDGCVKLWKITPKR---------TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +.+|++|+.||.|++||+.++.         .+..+..  |.+.|++++|  ++.+|+++ +.||.|++|+......
T Consensus       346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~s~-s~Dg~i~iwd~~~~~~  417 (435)
T 1p22_A          346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQF--DEFQIVSS-SHDDTILIWDFLNDPA  417 (435)
T ss_dssp             SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEE--CSSCEEEC-CSSSEEEEEC------
T ss_pred             CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC--CCCCeEEEEe--CCCEEEEE-eCCCEEEEEECCCCCC
Confidence            8899999999999999997665         5666665  8899999999  67888887 8999999999876543

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=1.2e-36  Score=289.39  Aligned_cols=281  Identities=20%  Similarity=0.413  Sum_probs=245.2

Q ss_pred             eEeEeccCCCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASI-TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ....+.+  |.+.| +|+.  +++++|++|+.||.|++||+.++.....+.      +|...|.+++|+  +.+|++|+.
T Consensus       110 ~~~~l~~--h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~--~~~l~s~~~  177 (445)
T 2ovr_B          110 SPKVLKG--HDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLV------GHTGGVWSSQMR--DNIIISGST  177 (445)
T ss_dssp             CCEEEEC--STTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECC------CCSSCEEEEEEE--TTEEEEEET
T ss_pred             eeEEecc--cCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEc------CCCCCEEEEEec--CCEEEEEeC
Confidence            3456788  99875 5544  568999999999999999999988877765      688999999998  569999999


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      ||.|++||+ ++..+..+.+|...|.++.|+  ++.|++|+.||.|++||+.+++.+..+.+|...|.++.|  ++++|+
T Consensus       178 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~  253 (445)
T 2ovr_B          178 DRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVV  253 (445)
T ss_dssp             TSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEE
T ss_pred             CCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEE
Confidence            999999999 778888999999999999996  568999999999999999999999999999999999999  688999


Q ss_pred             EeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        290 SGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +|+.||.|++||++++..+ .+.+|...+.++.+ ++.++++++.||.|++||+.++..+..+..         |...+.
T Consensus       254 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~v~  323 (445)
T 2ovr_B          254 SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTG---------HQSLTS  323 (445)
T ss_dssp             EEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECC---------CCSCEE
T ss_pred             EEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcC---------CcccEE
Confidence            9999999999999998877 67788889988888 788999999999999999999988877753         344488


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ++.+  ++++|++|+.||.|++||+.+++.+..+... .|...|++++|+  +.+|+++ +.||.|++|+...+..
T Consensus       324 ~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~v~iwd~~~~~~  394 (445)
T 2ovr_B          324 GMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITS-SDDGTVKLWDLKTGEF  394 (445)
T ss_dssp             EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEE-ETTSEEEEEETTTCCE
T ss_pred             EEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEE-eCCCeEEEEECCCCce
Confidence            7777  4669999999999999999999888887653 277889999996  5788888 8999999999876643

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=8e-38  Score=286.81  Aligned_cols=254  Identities=21%  Similarity=0.278  Sum_probs=204.3

Q ss_pred             eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ..+  |...|.+++|+|++++|++|+.|+.|++|++.....  ...+.      +|...|.+++|+|++++|++|+.|+.
T Consensus        57 ~~~--h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~------~h~~~v~~v~~sp~~~~l~s~s~D~~  128 (345)
T 3fm0_A           57 SEG--HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE------GHENEVKSVAWAPSGNLLATCSRDKS  128 (345)
T ss_dssp             CSS--CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             ccc--cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc------CCCCCceEEEEeCCCCEEEEEECCCe
Confidence            356  999999999999999999999999999999887643  23333      68899999999999999999999999


Q ss_pred             EEEEeCC-C---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEeecCCCE
Q psy17902        214 IKLWSSS-L---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       214 v~vw~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      |++||+. .   ..+..+..|...|.+++|+|++.+|++|+.|+.|++||+.++.  +...+.+|...|++++|+|++++
T Consensus       129 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~  208 (345)
T 3fm0_A          129 VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR  208 (345)
T ss_dssp             EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE
Confidence            9999983 2   2356778999999999999999999999999999999998775  44678899999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCe---------------EE-EEcc-ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc--
Q psy17902        288 ISSGGTDKSVRVWKIQEES---------------QL-VFNG-HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP--  347 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~---------------~~-~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~--  347 (454)
                      |++++.|++|++|+.....               ++ .+.+ |...+..+.+. .+..|++++.|+.|++|+......  
T Consensus       209 l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~  288 (345)
T 3fm0_A          209 LASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ  288 (345)
T ss_dssp             EEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT
T ss_pred             EEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc
Confidence            9999999999999974321               11 2233 66777777665 567899999999999999876432  


Q ss_pred             --ceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeE
Q psy17902        348 --THTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       348 --~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                        ...+....    ...|...|++++|+|++. +||+|+.||+|++|++.+++.+..
T Consensus       289 ~~~~~~~~~~----~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~  341 (345)
T 3fm0_A          289 QPTFSLTAHL----HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH  341 (345)
T ss_dssp             SCCEEEEEEE----TTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred             eeeEEEEeee----cccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence              11111110    123667799999999884 999999999999999988765543

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-37  Score=287.75  Aligned_cols=252  Identities=16%  Similarity=0.235  Sum_probs=211.8

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCC--CcEEEEe
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANN--NELVASG  208 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~  208 (454)
                      ...+.+  |.+.|++++|+|++++|++|+.||.|++|++..  ......+.      +|...|.+++|+++  +.+|++|
T Consensus         4 ~~~~~~--h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~   75 (379)
T 3jrp_A            4 VVIANA--HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT------GHEGPVWRVDWAHPKFGTILASC   75 (379)
T ss_dssp             -CCEEE--CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC------CCSSCEEEEEECCGGGCSEEEEE
T ss_pred             cEEecC--CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec------CCCCcEEEEEeCCCCCCCEEEEe
Confidence            456778  999999999999999999999999999999983  33333333      68889999999977  9999999


Q ss_pred             cCCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEe
Q psy17902        209 DNNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDI  281 (454)
Q Consensus       209 ~~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~  281 (454)
                      +.||.|++||+ .+.  .+..+..|...|.+++|+|+  +.+|++++.||.|++||+.++.  ....+..|...|.+++|
T Consensus        76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~  155 (379)
T 3jrp_A           76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW  155 (379)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred             ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence            99999999999 444  67778889999999999999  9999999999999999998873  34566789999999999


Q ss_pred             ec-------------CCCEEEEeeCCCcEEEeeccCCeE----E-EEccccCCeEEEEecC----CCEEEEEeCCCCEEE
Q psy17902        282 LA-------------KNRVISSGGTDKSVRVWKIQEESQ----L-VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSL  339 (454)
Q Consensus       282 ~~-------------~~~~l~~~~~dg~i~i~d~~~~~~----~-~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~i  339 (454)
                      +|             ++.+|++++.||.|++||++++..    . .+.+|...+.++.+.+    +.+|++++.||.|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i  235 (379)
T 3jrp_A          156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII  235 (379)
T ss_dssp             CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred             cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence            99             689999999999999999987542    2 6677888998888775    468999999999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ||+.++...........    ..+...|++++|+|++++|++++.||.|++|++..+
T Consensus       236 wd~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          236 WTQDNEQGPWKKTLLKE----EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE  288 (379)
T ss_dssp             EEESSTTSCCEEEESSS----SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred             EeCCCCCccceeeeecc----ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence            99988753322222211    125566999999999999999999999999999743

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=6.2e-37  Score=280.53  Aligned_cols=275  Identities=19%  Similarity=0.304  Sum_probs=230.2

Q ss_pred             cCcEeeeehhhhc-cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce
Q psy17902        115 EGKLRVNIADRLA-NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI  193 (454)
Q Consensus       115 ~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v  193 (454)
                      ++.+..|-..... ......+.+.+  |...|.+++|+|++++|++|+.||.|++|+...........      .+...+
T Consensus        60 D~~i~vWd~~~~~~~~~~~~~~l~~--h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~------~~~~~~  131 (340)
T 4aow_A           60 DKTIIMWKLTRDETNYGIPQRALRG--HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV------GHTKDV  131 (340)
T ss_dssp             TSCEEEEEECCSSSCSEEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCE
T ss_pred             CCeEEEEECCCCCcccceeeEEEeC--CCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec------CCCCce
Confidence            4555555433322 22346778889  99999999999999999999999999999998877665544      466788


Q ss_pred             EEEEEeCCCcEEEEecCCCcEEEEeCCCc--cEEeecccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        194 LALAVANNNELVASGDNNSNIKLWSSSLE--HLHTFTGHKAPITGLAISFEC--DTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      ..+.+++++.+|++|+.|+.+++||+...  .......|...+.+++|++++  .++++++.|+.|++||+.+++.+..+
T Consensus       132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~  211 (340)
T 4aow_A          132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH  211 (340)
T ss_dssp             EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred             eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe
Confidence            89999999999999999999999999433  344567899999999998864  57889999999999999999999999


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      .+|...|++++|+|++++|++|+.|+.|++||+++...+....+...+..+.+.++..+++++.|+.|++||+..+..+.
T Consensus       212 ~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~  291 (340)
T 4aow_A          212 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD  291 (340)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred             cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence            99999999999999999999999999999999999998866666778888888888889999999999999999988877


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                      .+...........|...|++++|+|+|++|++|+.||.|+|||+.+|.
T Consensus       292 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt  339 (340)
T 4aow_A          292 ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT  339 (340)
T ss_dssp             EECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred             eccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence            766544333444577889999999999999999999999999999874

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=1.7e-36  Score=274.27  Aligned_cols=247  Identities=21%  Similarity=0.352  Sum_probs=215.1

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY  265 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  265 (454)
                      .+|...|.+++|+|++++|++|+.||.|++|++ ++.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++.
T Consensus        20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~   99 (312)
T 4ery_A           20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC   99 (312)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred             cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence            368899999999999999999999999999999 7778888999999999999999999999999999999999999999


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~  343 (454)
                      +..+.+|...|.++.|+|++++|++|+.|+.|++||++++... .+..|...+.++.+. ++.+|++++.||.|++||+.
T Consensus       100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~  179 (312)
T 4ery_A          100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA  179 (312)
T ss_dssp             EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred             EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            9999999999999999999999999999999999999988876 777888888887775 56789999999999999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc-CCCCE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT-SDHKH  422 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s-~d~~~  422 (454)
                      +++.+..+...        +...+..++|+|++++|++++.||.|++||+.+++.+..+.............|+ +++.+
T Consensus       180 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (312)
T 4ery_A          180 SGQCLKTLIDD--------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW  251 (312)
T ss_dssp             TCCEEEEECCS--------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred             CCceeeEEecc--------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence            98877765432        2344999999999999999999999999999999888887763222222233444 67778


Q ss_pred             EEEEecCCCceeeeeeeCCC
Q psy17902        423 LVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |+++ +.|+.|++|+...+.
T Consensus       252 l~sg-~~dg~i~vwd~~~~~  270 (312)
T 4ery_A          252 IVSG-SEDNLVYIWNLQTKE  270 (312)
T ss_dssp             EEEC-CTTSCEEEEETTTCC
T ss_pred             EEEE-CCCCEEEEEECCCch
Confidence            8877 899999999986543

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.7e-37  Score=288.56  Aligned_cols=259  Identities=17%  Similarity=0.313  Sum_probs=214.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCC-CcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANN-NELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~  209 (454)
                      ....+.+  |...|.+++|+|++++|++|+.|+.|++|++.+.... ..........+|...|.++.|+|+ +..|++|+
T Consensus       100 ~~~~~~~--h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s  177 (380)
T 3iz6_a          100 KTHAIKL--HCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS  177 (380)
T ss_dssp             EEEEEEC--CCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC
T ss_pred             cceEEec--CCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC
Confidence            4566777  9999999999999999999999999999999754321 112222333478889999999996 45799999


Q ss_pred             CCCcEEEEeC-CCccEEee-----cccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CceeEEEeeccCCceeEEEe
Q psy17902        210 NNSNIKLWSS-SLEHLHTF-----TGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIE-DRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~  281 (454)
                      .|+.|++||+ ++..+..+     .+|...|.+++|++ ++++|++|+.||+|++||++ ....+..+.+|...|++++|
T Consensus       178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~  257 (380)
T 3iz6_a          178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKF  257 (380)
T ss_dssp             TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEE
T ss_pred             CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEE
Confidence            9999999999 66666665     67999999999987 78999999999999999998 45777888899999999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE-EEcccc-------CCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHS-------RGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      +|++.+|++|+.||+|++||++++..+ .+..+.       ..+.++.+ +++.+|++|+.||.|++||+..+..+..+.
T Consensus       258 ~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~  337 (380)
T 3iz6_a          258 FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG  337 (380)
T ss_dssp             CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred             ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe
Confidence            999999999999999999999998877 333322       12455554 568899999999999999998887776653


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                      ...     ..|...|++++|+|+|.+|++|+.||+|++|++...+
T Consensus       338 ~~~-----~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~  377 (380)
T 3iz6_a          338 TLQ-----NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR  377 (380)
T ss_dssp             CSC-----SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred             ccc-----CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence            221     1366779999999999999999999999999997654

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=1.6e-37  Score=331.51  Aligned_cols=297  Identities=19%  Similarity=0.335  Sum_probs=258.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc----------------------------
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV----------------------------  183 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----------------------------  183 (454)
                      ....+.+  |.+.|++++|+|++++|++++.||.|++||+.++.....+...                            
T Consensus       735 ~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~  812 (1249)
T 3sfz_A          735 CRNTMFG--HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK  812 (1249)
T ss_dssp             EEEEECC--CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred             hhheecC--CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence            4556777  9999999999999999999999999999999876543322100                            


Q ss_pred             ---------------------ccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC
Q psy17902        184 ---------------------KTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       184 ---------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                                           ....+|...|.+++|+|++.++++++.+|.|++|++ ++..+..+.+|...|.+++|+|
T Consensus       813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp  892 (1249)
T 3sfz_A          813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP  892 (1249)
T ss_dssp             EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred             EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence                                 001257788999999999999999999999999999 7777888899999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEeCC------------------------------------------------------------
Q psy17902        242 ECDTLYSSSNDRSIKVWNIE------------------------------------------------------------  261 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~------------------------------------------------------------  261 (454)
                      ++.+|++++.||.|++|++.                                                            
T Consensus       893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~  972 (1249)
T 3sfz_A          893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH  972 (1249)
T ss_dssp             TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred             CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence            99999999999999988843                                                            


Q ss_pred             -------------------CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe
Q psy17902        262 -------------------DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR  322 (454)
Q Consensus       262 -------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~  322 (454)
                                         ++..+..+.+|...|++++|+|++++|++++.||.|++||+.++.......|...+..+.+
T Consensus       973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A          973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL 1052 (1249)
T ss_dssp             SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEE
T ss_pred             CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEE
Confidence                               2233344557889999999999999999999999999999999998888899999999999


Q ss_pred             cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902        323 VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       323 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  402 (454)
                      .++..+++++.||.|++||+.++.....+..         |...|++++|+|++++|++++.||+|++||+.++..+..+
T Consensus      1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---------~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A         1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTC---------HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp             CSSSEEEEEESSSEEEEEETTTTCCCEEEEC---------CSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCC
T ss_pred             cCCCcEEEEECCCcEEEEECCCCceeEEEcc---------cCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeee
Confidence            9999999999999999999999988887764         3445999999999999999999999999999999888888


Q ss_pred             ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        403 QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       403 ~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ..  |.+.|++++|+|+|++|+++ +.||.|++|+..++.
T Consensus      1124 ~~--h~~~v~~~~~s~dg~~lat~-~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A         1124 KG--HNGCVRCSAFSLDGILLATG-DDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp             CC--CSSCEEEEEECSSSSEEEEE-ETTSCCCEEESSSSC
T ss_pred             cc--CCCcEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc
Confidence            76  88899999999999999999 899999999987654

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=3.9e-37  Score=288.67  Aligned_cols=290  Identities=19%  Similarity=0.193  Sum_probs=233.0

Q ss_pred             CCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC-
Q psy17902        143 ASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~-  219 (454)
                      .....++++|+...+ ++++.||.|+||++........  ......+|...|.+++|+| ++.+|++|+.||.|+||++ 
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~--~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~  112 (402)
T 2aq5_A           35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDK--NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP  112 (402)
T ss_dssp             CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCT--TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred             cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCC--CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence            345578899876544 4578899999999976433211  1122236889999999999 9999999999999999999 


Q ss_pred             CC-------ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEe--eccCCceeEEEeecCCCEEE
Q psy17902        220 SL-------EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       220 ~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~  289 (454)
                      .+       ..+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+..+  .+|...|.+++|+|++++|+
T Consensus       113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  192 (402)
T 2aq5_A          113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC  192 (402)
T ss_dssp             TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred             CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence            33       5678889999999999999998 69999999999999999999999888  78999999999999999999


Q ss_pred             EeeCCCcEEEeeccCCeEE-EE-ccccCC-eEEEEec-CCCEEEEE---eCCCCEEEEecCCCcc-ceeeecccCCCCCC
Q psy17902        290 SGGTDKSVRVWKIQEESQL-VF-NGHSRG-IDMTRRV-NDQQFITC---GEDGTLSLWSILKKVP-THTIPVAHGYDSSS  361 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~-~~-~~~~~~-i~~~~~~-~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~  361 (454)
                      +++.||.|++||++++..+ .+ ..|... +..+.+. ++.+|++|   +.|+.|++||+.+... +......       
T Consensus       193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~-------  265 (402)
T 2aq5_A          193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD-------  265 (402)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC-------
T ss_pred             EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc-------
Confidence            9999999999999998877 44 566654 5555554 55566666   6899999999988654 3333322       


Q ss_pred             CCCCcEEEEEEecCCCEEE-EecCCCcEEEEEcCCCce-eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        362 SEPNWITSVACLHNSDLVA-SGSYDGCVKLWKITPKRT-LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~-~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                       +...+.+++|+|++++|+ +|+.||.|++|++.++.. +..+....+..+|.+++|+|++.++++   .++.+++|+..
T Consensus       266 -~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s---~~~~~~~~~l~  341 (402)
T 2aq5_A          266 -TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN---KCEIARFYKLH  341 (402)
T ss_dssp             -CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG---GTEEEEEEEEE
T ss_pred             -CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee---cceeEEEEEcC
Confidence             234499999999999886 566799999999998874 666665556789999999999998764   46699999998


Q ss_pred             CCCeeE
Q psy17902        440 KGVKNT  445 (454)
Q Consensus       440 ~~~~~~  445 (454)
                      .+....
T Consensus       342 ~~~~~~  347 (402)
T 2aq5_A          342 ERKCEP  347 (402)
T ss_dssp             TTEEEE
T ss_pred             CCcEEE
Confidence            764433

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.2e-37  Score=315.27  Aligned_cols=159  Identities=9%  Similarity=0.103  Sum_probs=140.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |...|.+++|+| +++|++++.|++|++||+.+++.+..+.       +...|++++|+|++++|++|+.||.|++||+.
T Consensus        57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~  128 (902)
T 2oaj_A           57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-------VPGKITSIDTDASLDWMLIGLQNGSMIVYDID  128 (902)
T ss_dssp             SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-------CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred             CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence            888999999999 8899999999999999999988766553       45689999999999999999999999999995


Q ss_pred             CccE------------EeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeecc---------------
Q psy17902        221 LEHL------------HTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGH---------------  272 (454)
Q Consensus       221 ~~~~------------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------  272 (454)
                      ...+            ..+.+|.+.|++++|+|+ +..|++|+.||.| +||+++++.+..+..|               
T Consensus       129 ~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~  207 (902)
T 2oaj_A          129 RDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTN  207 (902)
T ss_dssp             TTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTT
T ss_pred             CCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccc
Confidence            4433            234679999999999996 5789999999999 9999999988887655               


Q ss_pred             ---CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        273 ---QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       273 ---~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                         ...|++++|+|++.+|++++.||.|++||+++++.+
T Consensus       208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~  246 (902)
T 2oaj_A          208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI  246 (902)
T ss_dssp             SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred             cccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence               477999999999999999999999999999876654

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=1.2e-36  Score=301.47  Aligned_cols=271  Identities=15%  Similarity=0.226  Sum_probs=233.2

Q ss_pred             eeEeEeccCCCCCC-eEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC--------ceecccCCcccCCCCCCceEEEEEe
Q psy17902        131 VVCTKFNGKPHRAS-ITCIAVTS--DSKHVYSACKDGIIIKWLLETR--------SKVCSSPFVKTDRKSYPPILALAVA  199 (454)
Q Consensus       131 ~~~~~~~~~~h~~~-V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~  199 (454)
                      .....+.+  |.+. |++++|+|  ++++|++|+.||.|++||+.++        .....+.      .|...|.+++|+
T Consensus        54 ~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s  125 (615)
T 1pgu_A           54 PPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ------VLAGPISDISWD  125 (615)
T ss_dssp             CSEEEECT--TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE------CCSSCEEEEEEC
T ss_pred             ccceEEec--CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh------cccccEEEEEEe
Confidence            45677888  9999 99999999  9999999999999999999754        3333332      477899999999


Q ss_pred             CCCcEEEEecCC----CcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCC
Q psy17902        200 NNNELVASGDNN----SNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQS  274 (454)
Q Consensus       200 ~~~~~l~~~~~d----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  274 (454)
                      |++++|++++.+    +.|.+|+ .+..+..+..|...|.+++|+|++. .|++++.|+.|++||+.+++.+..+.+|..
T Consensus       126 ~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~  204 (615)
T 1pgu_A          126 FEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK  204 (615)
T ss_dssp             TTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC
T ss_pred             CCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCC
Confidence            999999999987    7899999 6677888999999999999999997 899999999999999999999999999999


Q ss_pred             ---ceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEEEEc-----cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC
Q psy17902        275 ---AITSLDILAK-NRVISSGGTDKSVRVWKIQEESQLVFN-----GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       275 ---~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                         .|++++|+|+ +++|++++.||.|++||+.+++.+...     .|...+..+.+.++.+|++++.||.|++||+.++
T Consensus       205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~  284 (615)
T 1pgu_A          205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS  284 (615)
T ss_dssp             TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT
T ss_pred             CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCC
Confidence               9999999999 999999999999999999998887443     8888998888877779999999999999999999


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +.+..+.....     .....+.++.|+ ++.+|++++.||.|++||+.++..+..+..  |...|++++| |+
T Consensus       285 ~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~--~~~~v~~~~~-~~  349 (615)
T 1pgu_A          285 KCVQKWTLDKQ-----QLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISG--HNKGITALTV-NP  349 (615)
T ss_dssp             EEEEEEECCTT-----CGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECC--CSSCEEEEET-TT
T ss_pred             cEEEEEcCCCC-----cccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeC--CCCCEEEEEe-cC
Confidence            88888765421     123448888886 888999999999999999998877777765  5556666666 54

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.5e-37  Score=283.80  Aligned_cols=295  Identities=15%  Similarity=0.175  Sum_probs=218.9

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDN  210 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~  210 (454)
                      ...+.+  |.+.|++++|+|++++|++|+.||.|++|++.+.......  .....+|...|.+++|+|  ++.+|++|+.
T Consensus         4 ~~~~~g--H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~   79 (351)
T 3f3f_A            4 QPFDSG--HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWEL--SDSWRAHDSSIVAIDWASPEYGRIIASASY   79 (351)
T ss_dssp             CCEECC--CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEE--EEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             cccCcc--cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCccee--cceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence            345677  9999999999999999999999999999999876422111  111125888999999999  6999999999


Q ss_pred             CCcEEEEeCCC----------ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCceeEEEee--------
Q psy17902        211 NSNIKLWSSSL----------EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAYVETLF--------  270 (454)
Q Consensus       211 dg~v~vw~~~~----------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~--------  270 (454)
                      ||.|++||+..          ..+..+..|...|.+++|+|+  +.+|++++.||.|++||+.+++.+..+.        
T Consensus        80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  159 (351)
T 3f3f_A           80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL  159 (351)
T ss_dssp             TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred             CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence            99999999943          457788899999999999999  9999999999999999998876543332        


Q ss_pred             -----ccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCC-----CEEEEEeCC
Q psy17902        271 -----GHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVND-----QQFITCGED  334 (454)
Q Consensus       271 -----~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~-----~~l~~~~~d  334 (454)
                           .|...+.+++|+|+   +.+|++++.++.+.+|+...+...   .+.+|...+.++.+.++     .+|++++.|
T Consensus       160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d  239 (351)
T 3f3f_A          160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD  239 (351)
T ss_dssp             SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred             ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence                 57889999999997   899999999999988888777642   66788899998888876     589999999


Q ss_pred             CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe----cCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902        335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG----SYDGCVKLWKITPKRTLEFLQDIPLSGV  410 (454)
Q Consensus       335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~dg~v~iwd~~~~~~~~~~~~~~~~~~  410 (454)
                      |.|++||+..+..........         ..+.....++....++.+    .....+.+|+......+..+..  |.+.
T Consensus       240 g~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~  308 (351)
T 3f3f_A          240 GRIRIFKITEKLSPLASEESL---------TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGE  308 (351)
T ss_dssp             SCEEEEEEEECC------------------------------------------------CCSEEEEEEEEECT--TSSC
T ss_pred             CeEEEEeCCCCcCccccCCcc---------cceeccCCCcccccccccccccccceeeeecccccccEEEEEec--cccc
Confidence            999999998764443322111         113333333443333333    3344566666665666776765  8889


Q ss_pred             eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        411 INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       411 v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      |++++|+|++++|+++ +.|+.|++|+...+..
T Consensus       309 v~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          309 VWSVSWNLTGTILSSA-GDDGKVRLWKATYSNE  340 (351)
T ss_dssp             EEEEEECSSSCCEEEE-ETTSCEEEEEECTTSC
T ss_pred             EEEEEEcCCCCEEEEe-cCCCcEEEEecCcCcc
Confidence            9999999999999998 8999999999987643

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=3.8e-36  Score=297.73  Aligned_cols=287  Identities=17%  Similarity=0.240  Sum_probs=228.7

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC---ceEEEEEeCC-CcEEE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP---PILALAVANN-NELVA  206 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~  206 (454)
                      ....+.+  |...|++++|+|+++ +|++++.||.|++||+.++.....+.      .|..   .|.+++|+|+ +++|+
T Consensus       152 ~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~l~  223 (615)
T 1pgu_A          152 SLGEVSG--HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR------THHKQGSFVRDVEFSPDSGEFVI  223 (615)
T ss_dssp             EEEECCS--CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC------SSSCTTCCEEEEEECSTTCCEEE
T ss_pred             cceeeec--CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec------ccCCCCceEEEEEECCCCCCEEE
Confidence            5567778  999999999999998 89999999999999999888776665      5777   8999999999 99999


Q ss_pred             EecCCCcEEEEeC-CCccEEee-c---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-----------
Q psy17902        207 SGDNNSNIKLWSS-SLEHLHTF-T---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-----------  270 (454)
Q Consensus       207 ~~~~dg~v~vw~~-~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----------  270 (454)
                      +++.||.|++||+ ++..+..+ .   .|...|.+++|+ ++.+|++++.||.|++||+.+++.+..+.           
T Consensus       224 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~  302 (615)
T 1pgu_A          224 TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV  302 (615)
T ss_dssp             EEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred             EEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence            9999999999999 67777777 5   899999999999 99999999999999999998765544332           


Q ss_pred             ----------------------------------ccCCceeEEEeec---------------------------------
Q psy17902        271 ----------------------------------GHQSAITSLDILA---------------------------------  283 (454)
Q Consensus       271 ----------------------------------~~~~~v~~~~~~~---------------------------------  283 (454)
                                                        +|...|++++| |                                 
T Consensus       303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~  381 (615)
T 1pgu_A          303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS  381 (615)
T ss_dssp             EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECC
T ss_pred             EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEEC
Confidence                                              23333333333 2                                 


Q ss_pred             CCCEEEEeeCCCcEEEeecc------------------------------------------------------------
Q psy17902        284 KNRVISSGGTDKSVRVWKIQ------------------------------------------------------------  303 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~------------------------------------------------------------  303 (454)
                      ++..|++++.|+.|++|++.                                                            
T Consensus       382 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  461 (615)
T 1pgu_A          382 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAV  461 (615)
T ss_dssp             STTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEE
T ss_pred             CCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEE
Confidence            24444444444444444443                                                            


Q ss_pred             --------------CCeE--EEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        304 --------------EESQ--LVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       304 --------------~~~~--~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                                    ++..  ..+..|...+.++.+. ++.+|++++.||.|++||+.++..+..+...        |...
T Consensus       462 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------h~~~  533 (615)
T 1pgu_A          462 GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF--------RTSK  533 (615)
T ss_dssp             EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC--------CSSC
T ss_pred             eecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC--------CCCc
Confidence                          2222  2233456667766665 5778999999999999999988887665431        4556


Q ss_pred             EEEEEEec----------CCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        367 ITSVACLH----------NSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       367 i~~~~~s~----------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      |++++|+|          ++++|++|+.||.|++|++.++ +.+..+..  |...|++++|+|+++ |+++ +.|+.|++
T Consensus       534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~-l~s~-~~d~~v~i  609 (615)
T 1pgu_A          534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA--HKDGVNNLLWETPST-LVSS-GADACIKR  609 (615)
T ss_dssp             EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS--STTCEEEEEEEETTE-EEEE-ETTSCEEE
T ss_pred             eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhc--CccceEEEEEcCCCC-eEEe-cCCceEEE
Confidence            99999999          9999999999999999999988 67777765  889999999999999 8887 89999999


Q ss_pred             eeeeC
Q psy17902        436 WKTIK  440 (454)
Q Consensus       436 W~~~~  440 (454)
                      |++..
T Consensus       610 w~~~~  614 (615)
T 1pgu_A          610 WNVVL  614 (615)
T ss_dssp             EEEC-
T ss_pred             Eeeec
Confidence            99864

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=1e-37  Score=282.44  Aligned_cols=245  Identities=16%  Similarity=0.254  Sum_probs=199.2

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCcccCCCCCCceEEEEEeC--CCcEEEEec
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKTDRKSYPPILALAVAN--NNELVASGD  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~  209 (454)
                      ..+.+  |.+.|++++|+|+|++||+|+.|++|+|||+.++..  ...+.      +|...|.+++|++  ++++|++|+
T Consensus         7 ~~~~~--H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~------gH~~~V~~v~~~~~~~~~~l~s~s   78 (316)
T 3bg1_A            7 TVDTS--HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR------GHEGPVWQVAWAHPMYGNILASCS   78 (316)
T ss_dssp             ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE------CCSSCEEEEEECCGGGSSCEEEEE
T ss_pred             eeccc--ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc------CCCccEEEEEeCCCCCCCEEEEEE
Confidence            34567  999999999999999999999999999999987643  22222      6889999999986  489999999


Q ss_pred             CCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEe
Q psy17902        210 NNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDI  281 (454)
Q Consensus       210 ~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~  281 (454)
                      .|+.|++||+..   ..+..+.+|...|.+++|+|+  +.+|++|+.|+.|++||+..+..   ...+.+|...|.+++|
T Consensus        79 ~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~  158 (316)
T 3bg1_A           79 YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW  158 (316)
T ss_dssp             TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred             CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence            999999999943   356678899999999999997  78999999999999999987632   3455689999999999


Q ss_pred             ecC-----------------CCEEEEeeCCCcEEEeeccCCe---EE-EEccccCCeEEEEecCC-----CEEEEEeCCC
Q psy17902        282 LAK-----------------NRVISSGGTDKSVRVWKIQEES---QL-VFNGHSRGIDMTRRVND-----QQFITCGEDG  335 (454)
Q Consensus       282 ~~~-----------------~~~l~~~~~dg~i~i~d~~~~~---~~-~~~~~~~~i~~~~~~~~-----~~l~~~~~dg  335 (454)
                      +|+                 +.+|++|+.|+.|++||++...   .. .+.+|...|.++.+.+.     .+|++++.|+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~  238 (316)
T 3bg1_A          159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG  238 (316)
T ss_dssp             CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred             ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence            987                 4689999999999999997542   22 57789999998888764     6899999999


Q ss_pred             CEEEEecCCCc----cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        336 TLSLWSILKKV----PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       336 ~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      +|++|++.+..    ....+.         .|...|.+++|+|++++||+++.||+|++|+...
T Consensus       239 ~v~iw~~~~~~~~~~~~~~~~---------~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~  293 (316)
T 3bg1_A          239 RVFIWTCDDASSNTWSPKLLH---------KFNDVVWHVSWSITANILAVSGGDNKVTLWKESV  293 (316)
T ss_dssp             EEEEEECSSTTCCCCBCCEEE---------ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred             eEEEEEccCccccchhhhhhh---------cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence            99999987631    111221         1345699999999999999999999999999753

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.9e-36  Score=282.78  Aligned_cols=239  Identities=23%  Similarity=0.391  Sum_probs=205.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      +...|.+++|+|++++|++|+.||.|++||+.++.....+.      +|...|.+++|+|++.+|++|+.|+.|++||+ 
T Consensus       122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~  195 (393)
T 1erj_A          122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR  195 (393)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence            44469999999999999999999999999999887766655      68899999999999999999999999999999 


Q ss_pred             CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEe-------eccCCceeEEEeecCCCEEEEe
Q psy17902        220 SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETL-------FGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      ++.....+. +...+.+++|+| ++.+|++|+.||.|++||+.++..+..+       .+|...|.+++|+|++.+|++|
T Consensus       196 ~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~  274 (393)
T 1erj_A          196 TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG  274 (393)
T ss_dssp             TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred             CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence            445444444 667899999999 8999999999999999999998877666       5799999999999999999999


Q ss_pred             eCCCcEEEeeccCCe-------------EEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902        292 GTDKSVRVWKIQEES-------------QLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~-------------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      +.|+.|++||+++..             ...+.+|...+.++.+. ++.+|++++.|+.|++||+.++.++..+..    
T Consensus       275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~----  350 (393)
T 1erj_A          275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG----  350 (393)
T ss_dssp             ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred             eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC----
Confidence            999999999997632             12567788888777665 577899999999999999999988877753    


Q ss_pred             CCCCCCCCcEEEEEEec------CCCEEEEecCCCcEEEEEcCC
Q psy17902        358 DSSSSEPNWITSVACLH------NSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~------~~~~l~~~~~dg~v~iwd~~~  395 (454)
                           |...|.+++|++      ++++|++|+.||+|+||++..
T Consensus       351 -----h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~  389 (393)
T 1erj_A          351 -----HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK  389 (393)
T ss_dssp             -----CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred             -----CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence                 455599999886      678999999999999999864

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.2e-36  Score=305.21  Aligned_cols=255  Identities=21%  Similarity=0.358  Sum_probs=218.7

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.+.+  |...|.+++|+|++++|++|+.||.|+|||+.++.....+.      +|...|.+++|+|++++|++|+.|
T Consensus       422 ~~~~~~~--h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~D  493 (694)
T 3dm0_A          422 AQRRLTG--HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV------GHTKDVLSVAFSLDNRQIVSASRD  493 (694)
T ss_dssp             EEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEECTTSSCEEEEETT
T ss_pred             ccceecC--CCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe------CCCCCEEEEEEeCCCCEEEEEeCC
Confidence            4567888  99999999999999999999999999999999887776654      688999999999999999999999


Q ss_pred             CcEEEEeCCCccEEee----cccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC
Q psy17902        212 SNIKLWSSSLEHLHTF----TGHKAPITGLAISFEC--DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~  285 (454)
                      ++|++||+.+.....+    .+|...|.+++|+|++  ..|++|+.|++|++||+.+++....+.+|...|++++|+|++
T Consensus       494 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg  573 (694)
T 3dm0_A          494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG  573 (694)
T ss_dssp             SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred             CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCC
Confidence            9999999865544443    4688999999999986  689999999999999999999999999999999999999999


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCC-------
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD-------  358 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------  358 (454)
                      ++|++|+.||.|++||+++++.+....+...+.++.++++..+++++.++.|++||+.++..+..+.......       
T Consensus       574 ~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  653 (694)
T 3dm0_A          574 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNS  653 (694)
T ss_dssp             SEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC---------
T ss_pred             CEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhcccccccccccccc
Confidence            9999999999999999999988865566677888888877777777778889999999998877765332111       


Q ss_pred             ---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        359 ---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       359 ---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                         ....+...+++++|+|+|++|++|+.||+|+||++.
T Consensus       654 ~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~  692 (694)
T 3dm0_A          654 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG  692 (694)
T ss_dssp             -------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             ccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence               011123358899999999999999999999999985

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.1e-36  Score=309.23  Aligned_cols=200  Identities=14%  Similarity=0.077  Sum_probs=170.2

Q ss_pred             eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902        136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK  215 (454)
Q Consensus       136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~  215 (454)
                      ..|  |.+.|++++|+|++++||+|+.||.|+||+..+.......       .|..+|.+++|+| +++|++++.|+.|+
T Consensus        13 ~~g--h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-------~~~~~V~~l~fsp-g~~L~S~s~D~~v~   82 (902)
T 2oaj_A           13 KYG--MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-------EDRSAIKEMRFVK-GIYLVVINAKDTVY   82 (902)
T ss_dssp             EEE--CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-------SSCCCEEEEEEET-TTEEEEEETTCEEE
T ss_pred             ccC--CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-------CCCCCEEEEEEcC-CCEEEEEECcCeEE
Confidence            346  9999999999999999999999999999998876554432       3667899999999 88999999999999


Q ss_pred             EEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE-----------EEeeccCCceeEEEeec
Q psy17902        216 LWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV-----------ETLFGHQSAITSLDILA  283 (454)
Q Consensus       216 vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~  283 (454)
                      |||+ ++..+..+. |...|++++|+|++++|++|+.||.|++||+.++...           ..+.+|.+.|++++|+|
T Consensus        83 lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp  161 (902)
T 2oaj_A           83 VLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP  161 (902)
T ss_dssp             EEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred             EEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence            9999 566666665 7789999999999999999999999999999988754           23357899999999999


Q ss_pred             C-CCEEEEeeCCCcEEEeeccCCeEE-EEccc------------------cCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902        284 K-NRVISSGGTDKSVRVWKIQEESQL-VFNGH------------------SRGIDMTRRV-NDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       284 ~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~------------------~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~  342 (454)
                      + +..|++|+.||.| +||++++... .+..|                  ...+.++.|. ++.+|++++.||.|++||+
T Consensus       162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~  240 (902)
T 2oaj_A          162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA  240 (902)
T ss_dssp             TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred             CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence            6 4789999999999 9999998876 44443                  3567777665 5778999999999999999


Q ss_pred             CCCcc
Q psy17902        343 LKKVP  347 (454)
Q Consensus       343 ~~~~~  347 (454)
                      .++++
T Consensus       241 ~~g~~  245 (902)
T 2oaj_A          241 NSGHM  245 (902)
T ss_dssp             TTCCE
T ss_pred             CCCcE
Confidence            76543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-37  Score=297.07  Aligned_cols=295  Identities=9%  Similarity=-0.027  Sum_probs=219.9

Q ss_pred             eEeccCCCCCCeEEEEEcCC------CCEEEEEeCCCeEEEEEcCCCceec-----ccCCcccCCCCCCceEEEEEeCCC
Q psy17902        134 TKFNGKPHRASITCIAVTSD------SKHVYSACKDGIIIKWLLETRSKVC-----SSPFVKTDRKSYPPILALAVANNN  202 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~  202 (454)
                      ..+.+  |.+.|.+++|+|+      +.+||+++.||+|+|||+.++....     .........+|...|++++|++++
T Consensus       201 ~~l~~--~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~  278 (524)
T 2j04_B          201 QTIVH--SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT  278 (524)
T ss_dssp             EEEEE--CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS
T ss_pred             EEEEe--cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC
Confidence            44667  8999999999996      5799999999999999998764220     000111223678899999999864


Q ss_pred             cEEEEecCCCcEEEEeCC-C-ccEEeecccCCCeEEE--EEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCC--c
Q psy17902        203 ELVASGDNNSNIKLWSSS-L-EHLHTFTGHKAPITGL--AISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQS--A  275 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~~-~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~  275 (454)
                       .|++|+.||+|++||+. + .+...+.+|...|+++  +|+|++ .+|++|+.|++|+|||+++++++..+.+|..  .
T Consensus       279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~  357 (524)
T 2j04_B          279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN  357 (524)
T ss_dssp             -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred             -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence             89999999999999994 3 3456688999999999  567887 8999999999999999999887777767653  5


Q ss_pred             eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        276 ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |.+++|+|++..|++++.|++|++||++++..+ .+.+|...|.++.+++ +..|++|+.||+|++||+... .+.....
T Consensus       358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~  436 (524)
T 2j04_B          358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKN  436 (524)
T ss_dssp             CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC--
T ss_pred             ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcccccc
Confidence            889999999999999999999999999988764 6778999998888765 678999999999999998653 2222110


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCC---EEEEEecC
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHK---HLVAGIGT  429 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~---~l~~~~~~  429 (454)
                      ...    ..+...+.+++|+|++..+.. ..  .+.+|+.. ++..+..+.+  |.+.|++++|+|++.   +|++| +.
T Consensus       437 ~~~----~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~g--h~~~V~~Vafsp~~~~~~~lAsg-~~  506 (524)
T 2j04_B          437 SSA----TQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDA--HGINITCTKWNETSAGGKCYAFS-NS  506 (524)
T ss_dssp             --------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC---------------CCCSCCCEEECCSTTTTTEEEEE-CT
T ss_pred             Ccc----ceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecC--CCceEEEEECCCCCCccHHHHhh-cc
Confidence            000    001224789999999985532 22  23444432 3556666665  889999999999965   77777 89


Q ss_pred             CCceeeeeeeCCC
Q psy17902        430 EHRFGRWKTIKGV  442 (454)
Q Consensus       430 d~~i~~W~~~~~~  442 (454)
                      +|.|++|+.....
T Consensus       507 ~g~vrlw~l~~~~  519 (524)
T 2j04_B          507 AGLLTLEYLSLEH  519 (524)
T ss_dssp             TSEEEEEECSCC-
T ss_pred             CceEEEEEccccc
Confidence            9999999976543

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=2.8e-37  Score=279.57  Aligned_cols=241  Identities=19%  Similarity=0.343  Sum_probs=198.4

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~  262 (454)
                      +|...|.+++|+|+|++||+|+.|++|+|||+ .+.  .+..+.+|...|.+++|++  ++++|++|+.|++|++||+.+
T Consensus        11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~   90 (316)
T 3bg1_A           11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN   90 (316)
T ss_dssp             ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred             cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence            68899999999999999999999999999999 333  4677899999999999986  489999999999999999988


Q ss_pred             ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEecCC---------
Q psy17902        263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRVND---------  325 (454)
Q Consensus       263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~~~---------  325 (454)
                      +.  .+..+.+|...|++++|+|+  +.+|++|+.|+.|++||++.....    .+.+|...+.++.+.+.         
T Consensus        91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~  170 (316)
T 3bg1_A           91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH  170 (316)
T ss_dssp             SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred             CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence            73  56677889999999999998  789999999999999999876321    44567777776666543         


Q ss_pred             ---------CEEEEEeCCCCEEEEecCCCc---cceeeecccCCCCCCCCCCcEEEEEEecCC----CEEEEecCCCcEE
Q psy17902        326 ---------QQFITCGEDGTLSLWSILKKV---PTHTIPVAHGYDSSSSEPNWITSVACLHNS----DLVASGSYDGCVK  389 (454)
Q Consensus       326 ---------~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~v~  389 (454)
                               .+|++++.|+.|++||+....   ++..+.         .|..+|.+++|+|++    .+|++|+.||+|+
T Consensus       171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~---------~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~  241 (316)
T 3bg1_A          171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE---------AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF  241 (316)
T ss_dssp             CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB---------CCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred             ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc---------cCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence                     589999999999999997543   222222         366779999999986    7999999999999


Q ss_pred             EEEcCCCc----eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        390 LWKITPKR----TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       390 iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +|++.+..    ....+..  |.+.|.+++|+|++++|+++ +.|+.|++|+...
T Consensus       242 iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~-~~D~~v~lw~~~~  293 (316)
T 3bg1_A          242 IWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVS-GGDNKVTLWKESV  293 (316)
T ss_dssp             EEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEE-ESSSCEEEEEECT
T ss_pred             EEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEE-cCCCeEEEEEECC
Confidence            99997631    1223333  67889999999999999998 8999999999753

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.9e-36  Score=278.14  Aligned_cols=248  Identities=17%  Similarity=0.323  Sum_probs=211.9

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIED  262 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~  262 (454)
                      +|...|.+++|+|++++|++|+.||.|+||++.   ...+..+.+|...|++++|+++  +.+|++|+.||.|++||+.+
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~   88 (379)
T 3jrp_A            9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN   88 (379)
T ss_dssp             ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred             CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence            688999999999999999999999999999983   3456678899999999999977  89999999999999999998


Q ss_pred             ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecC-----------
Q psy17902        263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVN-----------  324 (454)
Q Consensus       263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~-----------  324 (454)
                      ++  .+..+..|...|.+++|+|+  +.+|++++.|+.|++||+....   ...+..|...+.++.+.+           
T Consensus        89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  168 (379)
T 3jrp_A           89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG  168 (379)
T ss_dssp             TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred             CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence            87  67777889999999999999  8999999999999999998873   336778888998888876           


Q ss_pred             ---CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC---CCEEEEecCCCcEEEEEcCCCc-
Q psy17902        325 ---DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN---SDLVASGSYDGCVKLWKITPKR-  397 (454)
Q Consensus       325 ---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~v~iwd~~~~~-  397 (454)
                         +.+|++++.||.|++||++++..........     ..|...|.+++|+|+   +.+|++++.||.|++||+.++. 
T Consensus       169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~  243 (379)
T 3jrp_A          169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-----EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG  243 (379)
T ss_dssp             -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE-----CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred             CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE-----ecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence               7899999999999999998765443222111     125566999999999   8999999999999999998864 


Q ss_pred             --eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        398 --TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       398 --~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                        ....+....+...|++++|+|+|++|+++ +.|+.|++|+...+
T Consensus       244 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw~~~~~  288 (379)
T 3jrp_A          244 PWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENLE  288 (379)
T ss_dssp             CCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ESSSSEEEEEEEET
T ss_pred             cceeeeeccccCCCcEEEEEEcCCCCEEEEe-cCCCcEEEEeCCCC
Confidence              23333434478889999999999999998 78999999998743

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-36  Score=303.11  Aligned_cols=250  Identities=16%  Similarity=0.230  Sum_probs=207.7

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCC--CcEEEEec
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANN--NELVASGD  209 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~  209 (454)
                      ..+.+  |.+.|++++|+|++++|++|+.||.|++|++.+.  .....+.      +|..+|.+++|+++  +++|++|+
T Consensus         3 ~~l~g--H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~------~h~~~V~~l~~s~~~~~~~l~s~s   74 (753)
T 3jro_A            3 VIANA--HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT------GHEGPVWRVDWAHPKFGTILASCS   74 (753)
T ss_dssp             -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC------CCSSCEEEEEECCTTSCSEEEEEE
T ss_pred             eeccc--CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc------CCcCceEEEEecCCCCCCEEEEEe
Confidence            45677  9999999999999999999999999999999843  3333333      68899999999988  99999999


Q ss_pred             CCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEee
Q psy17902        210 NNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDIL  282 (454)
Q Consensus       210 ~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~  282 (454)
                      .||.|++||+ .+.  .+..+..|...|++++|+|+  +++|++|+.||.|++||+.++.  ....+.+|...|.+++|+
T Consensus        75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~  154 (753)
T 3jro_A           75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA  154 (753)
T ss_dssp             TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred             CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence            9999999999 443  67778889999999999999  9999999999999999998773  344567899999999999


Q ss_pred             c-------------CCCEEEEeeCCCcEEEeeccCCe----EE-EEccccCCeEEEEecC----CCEEEEEeCCCCEEEE
Q psy17902        283 A-------------KNRVISSGGTDKSVRVWKIQEES----QL-VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLW  340 (454)
Q Consensus       283 ~-------------~~~~l~~~~~dg~i~i~d~~~~~----~~-~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iw  340 (454)
                      |             ++.+|++|+.||.|++||++++.    .. .+.+|...+.++.+.+    +.+|++++.||.|++|
T Consensus       155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw  234 (753)
T 3jro_A          155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW  234 (753)
T ss_dssp             CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred             CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence            9             58999999999999999998763    22 6778899998888775    4689999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      |+.++..........    ...+...|++++|+|+|.+|++|+.||.|++|++..
T Consensus       235 d~~~~~~~~~~~~~~----~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~  285 (753)
T 3jro_A          235 TQDNEQGPWKKTLLK----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL  285 (753)
T ss_dssp             EESSSSSCCBCCBSS----SSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred             cCCCCCCcceeEEec----cCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence            998864322221111    123566699999999999999999999999999874

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-35  Score=279.93  Aligned_cols=295  Identities=12%  Similarity=0.098  Sum_probs=232.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eecccCCcc----------------------------------
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRS---KVCSSPFVK----------------------------------  184 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~----------------------------------  184 (454)
                      ..+|.+++|+|+|++|+++ .++.|++||+.+++   .+..+....                                  
T Consensus         4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (450)
T 2vdu_B            4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD   82 (450)
T ss_dssp             ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred             cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence            4578999999999976665 57899999999887   433322100                                  


Q ss_pred             --------------cCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCC---CccEEeec--ccCCCeEEEEEcCCCC
Q psy17902        185 --------------TDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSS---LEHLHTFT--GHKAPITGLAISFECD  244 (454)
Q Consensus       185 --------------~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~---~~~~~~~~--~~~~~v~~~~~~~~~~  244 (454)
                                    ....|...|.+++|+|++++| ++|+.||.|+||++.   +..+..+.  .|...|++++|+|++.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~  162 (450)
T 2vdu_B           83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT  162 (450)
T ss_dssp             -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred             cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence                          001344579999999999996 899999999999985   45566665  5778999999999999


Q ss_pred             EEEEEeCCCcEEEEeCCCceeEE----EeeccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCCeEE-E-EccccC
Q psy17902        245 TLYSSSNDRSIKVWNIEDRAYVE----TLFGHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEESQL-V-FNGHSR  315 (454)
Q Consensus       245 ~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~-~-~~~~~~  315 (454)
                      +|++|+.+|.|++|++.++....    .+.+|...|++++|+|+   +++|++|+.|+.|++||++++..+ . +.+|..
T Consensus       163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~  242 (450)
T 2vdu_B          163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH  242 (450)
T ss_dssp             EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred             EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence            99999999999999998876544    67789999999999999   999999999999999999988766 3 558888


Q ss_pred             CeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCC----------------CCCCCCCCcEEEEEEecCCCEE
Q psy17902        316 GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY----------------DSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       316 ~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      .+.++.+.++.+|++++.|+.|++||+.+++.+..+......                .........|.+++|+|++++|
T Consensus       243 ~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l  322 (450)
T 2vdu_B          243 FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV  322 (450)
T ss_dssp             CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred             ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence            998888777789999999999999999999888877643200                0000223459999999999999


Q ss_pred             EEec-CCCcEEEEEc--CCC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecC------CCceeeeeeeCC
Q psy17902        380 ASGS-YDGCVKLWKI--TPK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT------EHRFGRWKTIKG  441 (454)
Q Consensus       380 ~~~~-~dg~v~iwd~--~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~------d~~i~~W~~~~~  441 (454)
                      ++++ .++.|++|++  ..+   ..+..+..  + +.|.+++|+|++ .+++..+.      +..|.+|.....
T Consensus       323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~  392 (450)
T 2vdu_B          323 AFFVEATKCIIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN  392 (450)
T ss_dssp             EEEETTCSEEEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred             EEEECCCCeEEEEEeccCCCCceeeccEecc--C-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence            9998 8999999999  555   44555554  3 789999999954 45544232      455788887654

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.6e-36  Score=278.33  Aligned_cols=293  Identities=10%  Similarity=0.073  Sum_probs=224.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc------------------cCCc------ccCCCCCCceEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS------------------SPFV------KTDRKSYPPILAL  196 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~------------------~~~~------~~~~~~~~~v~~~  196 (454)
                      -...|.+++|+|||+++|+++.|++|+  |....+.+..                  +...      .....+...|.++
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v   91 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC   91 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence            667899999999999999999999996  5443332100                  0000      0011346789999


Q ss_pred             EEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-------
Q psy17902        197 AVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKA-----PITGLAISFECDTLYSSSNDRSIKVWNIEDRA-------  264 (454)
Q Consensus       197 ~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-------  264 (454)
                      +|+|+|.+||+++.||.|++|+..+ .+..+. |..     .|.+++|+|+|++|++|+.||+|++||+.++.       
T Consensus        92 awSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i  169 (588)
T 2j04_A           92 KPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY  169 (588)
T ss_dssp             EECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred             EECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence            9999999999999999999999754 566666 665     49999999999999999999999999999875       


Q ss_pred             eEEEe----eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EE-ccccCCeEEEEecCCCEEEEEeCCC
Q psy17902        265 YVETL----FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL----VF-NGHSRGIDMTRRVNDQQFITCGEDG  335 (454)
Q Consensus       265 ~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~-~~~~~~i~~~~~~~~~~l~~~~~dg  335 (454)
                      .+.++    .+|...|.+++|+|+|  +++++.|++|++||+..+...    .+ .+|...|..+.|. ++.+++++ ++
T Consensus       170 ~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~  245 (588)
T 2j04_A          170 FESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PG  245 (588)
T ss_dssp             EEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SS
T ss_pred             eeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CC
Confidence            25665    5677899999999999  778899999999999887742    34 4677788888887 78888887 69


Q ss_pred             CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE--ecCCCEEEEecCCCcEEEEEcCC-----C-ce-------ee
Q psy17902        336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC--LHNSDLVASGSYDGCVKLWKITP-----K-RT-------LE  400 (454)
Q Consensus       336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~v~iwd~~~-----~-~~-------~~  400 (454)
                      .|++||+.++........         |...+..++|  +|++..|++++.||+ ++|....     . ..       +.
T Consensus       246 tIkLWd~~~~~~~~~~~g---------h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~  315 (588)
T 2j04_A          246 YVHKIDLKNYSISSLKTG---------SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFK  315 (588)
T ss_dssp             EEEEEETTTTEEEEEECS---------CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHH
T ss_pred             eEEEEECCCCeEEEEEcC---------CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEE
Confidence            999999988766332211         4555999999  999999999999999 9998631     1 00       00


Q ss_pred             -------EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902        401 -------FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI  451 (454)
Q Consensus       401 -------~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~  451 (454)
                             .+....+...|++++|||||+.+|++..-+..+.-+.......-.+.+++|
T Consensus       316 lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i~~~~~~y~i~s~~~~~i~f~pL  373 (588)
T 2j04_A          316 KWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDMERVAFKYKIASEQSFNIMFAPL  373 (588)
T ss_dssp             HTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEEECSSCCCCCSSSCCEEEEEEES
T ss_pred             EEECCCCceeeeccceEEEEEEECCCCCEEEEEEeccCceeEEeeccceEEEEEEEEc
Confidence                   011222455699999999999999986666555666666666666666665

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=7.4e-35  Score=274.68  Aligned_cols=252  Identities=16%  Similarity=0.286  Sum_probs=210.3

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .+....|...|+||+|+|+|++||+|+.||.|+|||+.+++.+..+.      +|...+.+++++  +.+|++|+.|+.+
T Consensus       140 ~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~------~h~~~v~~~s~~--~~~l~sgs~d~~i  211 (420)
T 4gga_A          140 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT------SHSARVGSLSWN--SYILSSGSRSGHI  211 (420)
T ss_dssp             EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred             EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe------CCCCceEEEeeC--CCEEEEEeCCCce
Confidence            33333399999999999999999999999999999999998877765      688889888775  6799999999999


Q ss_pred             EEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce----eEEEeeccCCceeEEEeecCC-CE
Q psy17902        215 KLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA----YVETLFGHQSAITSLDILAKN-RV  287 (454)
Q Consensus       215 ~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~  287 (454)
                      ++|+.  ....+..+.+|...+..+.|+|++.++++++.|+.|++|++.+++    .+.....|...|.+++|+|.+ .+
T Consensus       212 ~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~  291 (420)
T 4gga_A          212 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV  291 (420)
T ss_dssp             EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred             eEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence            99998  456677889999999999999999999999999999999998764    345667899999999999976 45


Q ss_pred             EEE--eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        288 ISS--GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       288 l~~--~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      +++  |+.|++|++||+.++... .+..+...+..++.+++..+++++  .|+.|+|||+.++.++..+..         
T Consensus       292 la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g---------  362 (420)
T 4gga_A          292 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG---------  362 (420)
T ss_dssp             EEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---------
T ss_pred             EEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC---------
Confidence            554  457999999999999888 444455555566666778887765  789999999999999888753         


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      |...|++++|+|+|.+|++|+.||+|+|||+....+.....
T Consensus       363 H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~  403 (420)
T 4gga_A          363 HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRE  403 (420)
T ss_dssp             CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----
T ss_pred             CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhh
Confidence            55669999999999999999999999999998765554443

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.2e-35  Score=272.35  Aligned_cols=248  Identities=15%  Similarity=0.274  Sum_probs=209.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      |...|++++|+|++++|++|+.||.|++||+.++.....+.      .|...|.+++|+  +.+|++|+.||.|++||+.
T Consensus       133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~  204 (401)
T 4aez_A          133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA------GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVR  204 (401)
T ss_dssp             TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETT
T ss_pred             CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec------CCCCceEEEEEC--CCEEEEEcCCCCEEEEecc
Confidence            89999999999999999999999999999999988777665      588899999994  5799999999999999993


Q ss_pred             --CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEee--CCC
Q psy17902        221 --LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGG--TDK  295 (454)
Q Consensus       221 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg  295 (454)
                        ...+..+..|...|.+++|+|++.+|++|+.||.|++||+.++..+..+..|...|.+++|+|++ .++++++  .|+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~  284 (401)
T 4aez_A          205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK  284 (401)
T ss_dssp             SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred             cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence              56678889999999999999999999999999999999999999998998999999999999977 5666654  799


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEE--eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITC--GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      .|++||+.++.......+...+..+.+. ++..++++  +.||.|++||+.++.........       .|...|.+++|
T Consensus       285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-------~h~~~v~~~~~  357 (401)
T 4aez_A          285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-------AHDTRVLYSAL  357 (401)
T ss_dssp             EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-------CCSSCCCEEEE
T ss_pred             EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-------CCCCCEEEEEE
Confidence            9999999999888555666777777765 56677774  48999999999887655544322       14556999999


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      +|++.+|++++.||.|++|++.+++.+....
T Consensus       358 s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~  388 (401)
T 4aez_A          358 SPDGRILSTAASDENLKFWRVYDGDHVKRPI  388 (401)
T ss_dssp             CTTSSEEEEECTTSEEEEEECCC--------
T ss_pred             CCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence            9999999999999999999999887665543

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-36  Score=291.34  Aligned_cols=260  Identities=14%  Similarity=0.065  Sum_probs=201.3

Q ss_pred             CCCCeEEEEEcCCC---------CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        141 HRASITCIAVTSDS---------KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~---------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      +.+.|.+|+|+|++         ++||+|+.++..              .               ..+|++..|++++.|
T Consensus       132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~--------------~---------------~~~~~~~~laS~s~D  182 (524)
T 2j04_B          132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD--------------E---------------PLNEHLEMFDKEKHS  182 (524)
T ss_dssp             CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------------C
T ss_pred             CCCceeEEEecccCCCCccCcCCeEEEEEEecccC--------------C---------------ccchhhhhhccCCCC
Confidence            67889999999987         799999876420              0               126889999999999


Q ss_pred             CcEEEEeCC-Ccc----EEeecccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCcee-----------EEEe
Q psy17902        212 SNIKLWSSS-LEH----LHTFTGHKAPITGLAISFE------CDTLYSSSNDRSIKVWNIEDRAY-----------VETL  269 (454)
Q Consensus       212 g~v~vw~~~-~~~----~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~-----------~~~~  269 (454)
                      ++|+||++. +..    ...+..|.+.|.+++|+|+      +.+|++++.||+|++||+.++..           ...+
T Consensus       183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l  262 (524)
T 2j04_B          183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL  262 (524)
T ss_dssp             EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred             ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence            999999993 332    2345678899999999996      57999999999999999986632           2356


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEE--EecC-C-CEEEEEeCCCCEEEEecC
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMT--RRVN-D-QQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~--~~~~-~-~~l~~~~~dg~i~iwd~~  343 (454)
                      .+|...|++++|+++ ..|++|+.||+|++||++++...  .+.+|...|.++  .+++ + .+|++++.|++|+|||++
T Consensus       263 ~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~  341 (524)
T 2j04_B          263 SLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK  341 (524)
T ss_dssp             CCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred             EcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence            789999999999986 48999999999999999976432  578899999888  4555 4 689999999999999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      ++++...+.....       ...|.+++|+|++..|++++.|++|++||+.++..+..+..  |.+.|++|+|||+|++|
T Consensus       342 ~~~~~~~~~~~~~-------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l  412 (524)
T 2j04_B          342 DIATTKTTVSRFR-------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMV  412 (524)
T ss_dssp             GHHHHCEEEEECS-------CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBC
T ss_pred             CCCcccccccccc-------cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec--CCCceEEEEeCCCCCeE
Confidence            8887766643221       11278899999999999999999999999999888777776  88999999999999999


Q ss_pred             EEEecCCCceeeeeeeC
Q psy17902        424 VAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~~  440 (454)
                      ++| +.|+.|++|+...
T Consensus       413 ~Sg-s~Dgtv~lwd~~~  428 (524)
T 2j04_B          413 LAG-SADGSLIITNAAR  428 (524)
T ss_dssp             EEE-ETTTEEECCBSCS
T ss_pred             EEE-ECCCEEEEEechH
Confidence            988 8999999999654

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=1.6e-34  Score=295.60  Aligned_cols=288  Identities=19%  Similarity=0.252  Sum_probs=242.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.+.|++++|+|++++|++|+.||.|++||+.++.....+.      +|...|.+++|+|++.+|++++.|
T Consensus        47 ~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d  118 (814)
T 3mkq_A           47 EVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE------AHPDYIRSIAVHPTKPYVLSGSDD  118 (814)
T ss_dssp             EEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred             eEEEEec--CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------cCCCCEEEEEEeCCCCEEEEEcCC
Confidence            5667778  99999999999999999999999999999999988777665      588899999999999999999999


Q ss_pred             CcEEEEeC-CC-ccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccC-CceeEEEeec--CC
Q psy17902        212 SNIKLWSS-SL-EHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ-SAITSLDILA--KN  285 (454)
Q Consensus       212 g~v~vw~~-~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~  285 (454)
                      |.|++|++ .+ .....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..+.+++|+|  ++
T Consensus       119 g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  198 (814)
T 3mkq_A          119 LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK  198 (814)
T ss_dssp             SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred             CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence            99999999 33 56678889999999999999 88999999999999999999887777766554 8899999999  89


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      .+|++++.||.|++||+.++... .+.+|...+.++.+. ++.++++++.||.|++||+.++..+..+...         
T Consensus       199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------  269 (814)
T 3mkq_A          199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG---------  269 (814)
T ss_dssp             CEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS---------
T ss_pred             CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC---------
Confidence            99999999999999999998877 677788888877766 4678999999999999999998888777643         


Q ss_pred             CCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEecc-------------------------------------
Q psy17902        364 PNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQD-------------------------------------  404 (454)
Q Consensus       364 ~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~-------------------------------------  404 (454)
                      ...+.+++|+|++.  ++++++ ++.+.+|++..+.....+..                                     
T Consensus       270 ~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (814)
T 3mkq_A          270 LERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQ  348 (814)
T ss_dssp             SSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCC
T ss_pred             CCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceee
Confidence            34499999999987  455555 66689998765422211110                                     


Q ss_pred             ----CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        405 ----IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       405 ----~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                          ..+...+.+++|+|+|++|+++ + ++.+.+|+..
T Consensus       349 ~~~~~~~~~~~~~~~~spdg~~la~~-~-~~~~~i~~~~  385 (814)
T 3mkq_A          349 TKELGSVDVFPQSLAHSPNGRFVTVV-G-DGEYVIYTAL  385 (814)
T ss_dssp             CEEECCCSSCCSEEEECTTSSEEEEE-E-TTEEEEEETT
T ss_pred             eecCCCCccCCceeEECCCCCEEEEe-c-CCEEEEEECc
Confidence                1133457899999999999988 4 8999999854

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=7.3e-35  Score=271.45  Aligned_cols=241  Identities=15%  Similarity=0.224  Sum_probs=199.2

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |.+.|.+++|+| ++++|++++.||.|++||+.+.. ...+.   ....+...|.+++|+|++.+|++|+.||.|++||+
T Consensus       117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~  192 (383)
T 3ei3_B          117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFA---KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL  192 (383)
T ss_dssp             TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEE---CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred             cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEe---ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence            999999999999 78999999999999999998633 22221   11235578999999999999999999999999999


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCC----ceeEEEeeccCCceeEEEeec-CCCEEEEeeC
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIED----RAYVETLFGHQSAITSLDILA-KNRVISSGGT  293 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~  293 (454)
                      .+..+..+..|...|.+++|+|++. +|++++.|+.|++||+.+    +..+..+ +|...|++++|+| ++.+|++++.
T Consensus       193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~  271 (383)
T 3ei3_B          193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ  271 (383)
T ss_dssp             TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred             CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence            8889999999999999999999998 999999999999999987    5666666 7999999999999 9999999999


Q ss_pred             CCcEEEeeccCCeEE-EEccc-------cCCeEE----------EEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        294 DKSVRVWKIQEESQL-VFNGH-------SRGIDM----------TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       294 dg~i~i~d~~~~~~~-~~~~~-------~~~i~~----------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      |+.|++||++++... .+..|       ...+.+          +.+.+++.+ +++.||.|++||+.++..+..+....
T Consensus       272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~  350 (383)
T 3ei3_B          272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPN  350 (383)
T ss_dssp             SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTT
T ss_pred             CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCC
Confidence            999999999987654 33332       222222          333333333 67789999999999999888876432


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                             +...+.+++|+|++++|++|+ ||.|++||+.+
T Consensus       351 -------~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~  382 (383)
T 3ei3_B          351 -------AAGIISLNKFSPTGDVLASGM-GFNILIWNRED  382 (383)
T ss_dssp             -------BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred             -------CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence                   234478889999999999997 99999999864

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=3.4e-35  Score=271.71  Aligned_cols=251  Identities=16%  Similarity=0.205  Sum_probs=206.7

Q ss_pred             EeEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEE
Q psy17902        133 CTKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVAS  207 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~  207 (454)
                      ...+....|...|++++|+|+    +++|++|+.||.|++||+.++.....+.      +|...|.+++|+| ++.+|++
T Consensus        60 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~s  133 (366)
T 3k26_A           60 LQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV------GHGNAINELKFHPRDPNLLLS  133 (366)
T ss_dssp             EEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE------SCCSCEEEEEECSSCTTEEEE
T ss_pred             eeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec------CCCCcEEEEEECCCCCCEEEE
Confidence            333343348899999999998    6799999999999999999888776654      5888999999999 9999999


Q ss_pred             ecCCCcEEEEeC-CCccEEee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-------------
Q psy17902        208 GDNNSNIKLWSS-SLEHLHTF---TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-------------  270 (454)
Q Consensus       208 ~~~dg~v~vw~~-~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------------  270 (454)
                      |+.||.|++||+ .+..+..+   ..|...|.+++|+|++.+|++++.||.|++||+.+++.+..+.             
T Consensus       134 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~  213 (366)
T 3k26_A          134 VSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRP  213 (366)
T ss_dssp             EETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSC
T ss_pred             EeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccc
Confidence            999999999999 56666666   6899999999999999999999999999999999876543333             


Q ss_pred             ---------------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE--------------E-EEccccCCeEEE
Q psy17902        271 ---------------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ--------------L-VFNGHSRGIDMT  320 (454)
Q Consensus       271 ---------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------------~-~~~~~~~~i~~~  320 (454)
                                     .|...|.+++|+  +++|++++.|+.|++||+.+...              + .+..|...+.++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  291 (366)
T 3k26_A          214 FISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM  291 (366)
T ss_dssp             CCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred             ccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence                           399999999998  77999999999999999987643              2 566677777666


Q ss_pred             Eec-C--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        321 RRV-N--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       321 ~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      .+. +  +.+|++++.||.|++||+.++.+..........   ..+...|++++|+|++++|++++.||.|++||+.
T Consensus       292 ~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~  365 (366)
T 3k26_A          292 RFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH---HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL  365 (366)
T ss_dssp             CCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC---TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred             EEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc---cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence            554 4  688999999999999999988765421111000   0125669999999999999999999999999985

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=8.4e-35  Score=272.35  Aligned_cols=256  Identities=11%  Similarity=0.129  Sum_probs=215.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCC----C---CEEEEEeCCCeEEEEEcCCCce-----ecccCCcccCCCC-----CCceE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSD----S---KHVYSACKDGIIIKWLLETRSK-----VCSSPFVKTDRKS-----YPPIL  194 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~----~---~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~-----~~~v~  194 (454)
                      ....+.+  |...|++++|+|+    +   ++|++++.||.|++|++.++..     ...+.      .|     ...|.
T Consensus        54 ~~~~~~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~  125 (397)
T 1sq9_A           54 KSYSHFV--HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD------LLDSDMKKHSFW  125 (397)
T ss_dssp             GEEEEEC--CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC------CSCTTGGGSCEE
T ss_pred             cceEEec--CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec------ccccccCCCcEE
Confidence            4666778  9999999999999    9   9999999999999999988775     44433      35     57999


Q ss_pred             EEEEe----CCCcE-EEEecCCCcEEEEeC-C------CccEE-----ee-------cccCCCeEEEEEcCCCCEEEEEe
Q psy17902        195 ALAVA----NNNEL-VASGDNNSNIKLWSS-S------LEHLH-----TF-------TGHKAPITGLAISFECDTLYSSS  250 (454)
Q Consensus       195 ~~~~~----~~~~~-l~~~~~dg~v~vw~~-~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~  250 (454)
                      +++|+    |++.+ |++++.||.|++||+ .      ...+.     .+       ..|...|.+++|+|++ +|++++
T Consensus       126 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~  204 (397)
T 1sq9_A          126 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF  204 (397)
T ss_dssp             EEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC
T ss_pred             EEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe
Confidence            99999    99999 999999999999999 4      45555     66       4589999999999999 999999


Q ss_pred             CCCcEEEEeCCCceeEEEeec---c---CCceeEEEeecCCCEEEEeeCC---CcEEEeeccCCeEE-EEcc--------
Q psy17902        251 NDRSIKVWNIEDRAYVETLFG---H---QSAITSLDILAKNRVISSGGTD---KSVRVWKIQEESQL-VFNG--------  312 (454)
Q Consensus       251 ~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~-~~~~--------  312 (454)
                      .||.|++||+.+++.+..+..   |   ...|.+++|+|++.+|++++.|   +.|++||+++++.+ .+..        
T Consensus       205 ~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~  284 (397)
T 1sq9_A          205 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS  284 (397)
T ss_dssp             TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred             CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccc
Confidence            999999999999999999988   8   9999999999999999999999   99999999988877 6666        


Q ss_pred             -----ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC------------CCCCCCCCcEEEEEEec
Q psy17902        313 -----HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY------------DSSSSEPNWITSVACLH  374 (454)
Q Consensus       313 -----~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~~~~i~~~~~s~  374 (454)
                           |...+.++.+. ++.+|++++.||.|++||+.+++.+..+......            .....|...|++++|+|
T Consensus       285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~  364 (397)
T 1sq9_A          285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK  364 (397)
T ss_dssp             -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred             ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence                 88888887776 5779999999999999999999988888721100            00011266799999999


Q ss_pred             CC----------CEEEEecCCCcEEEEEcCCC
Q psy17902        375 NS----------DLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       375 ~~----------~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ++          ++|++|+.||.|++|++.++
T Consensus       365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g  396 (397)
T 1sq9_A          365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGG  396 (397)
T ss_dssp             TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred             ccccccccccccceEEEecCCCcEEEEEcCCC
Confidence            98          79999999999999999876

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=1.3e-35  Score=281.02  Aligned_cols=252  Identities=17%  Similarity=0.185  Sum_probs=198.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ....+.+  |.+.|++|+|+| ++++|++|+.||+|++||+.+........    ...+...+.+++|+|++.+|++|+.
T Consensus       156 ~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~g~~  229 (435)
T 4e54_B          156 TFIKGIG--AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS----SDTINIWFCSLDVSASSRMVVTGDN  229 (435)
T ss_dssp             EEECCCS--SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC----CSSCSCCCCCEEEETTTTEEEEECS
T ss_pred             eEEEccC--CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec----cCCCCccEEEEEECCCCCEEEEEeC
Confidence            3445667  999999999998 68999999999999999998654332211    1134456889999999999999999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEE---eeccCCceeEEEeecCCC
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVET---LFGHQSAITSLDILAKNR  286 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~  286 (454)
                      ||.|++||+.+..+..+.+|...|++++|+|++. +|++|+.|+.|++||+++......   ..+|...|++++|+|++.
T Consensus       230 dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~  309 (435)
T 4e54_B          230 VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA  309 (435)
T ss_dssp             SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred             CCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence            9999999998888889999999999999999876 788999999999999987764433   357999999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEcccc-------CCeEEEEecCCCEEEEEe------------CCCCEEEEecCCCc
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFNGHS-------RGIDMTRRVNDQQFITCG------------EDGTLSLWSILKKV  346 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------~~i~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~  346 (454)
                      +|++++.||.|++||+.++... .+..|.       ..+...+.+.+..+++++            .++.|++||..++.
T Consensus       310 ~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~  389 (435)
T 4e54_B          310 RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK  389 (435)
T ss_dssp             EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred             eeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence            9999999999999999987655 333332       123344444555555543            34679999999998


Q ss_pred             cceeeecccCCCCCCCCCCcEEEE-EEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      .+..+...+        ...|.++ +|+|+|.+|++|+ |++|+||++.+++.
T Consensus       390 ~~~~l~~~~--------~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~  433 (435)
T 4e54_B          390 MMCQLYDPE--------SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART  433 (435)
T ss_dssp             EEEEECCSS--------CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred             EEEEEeCCC--------CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence            887765333        3347776 6999999999886 78999999988754

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=2.3e-34  Score=266.87  Aligned_cols=260  Identities=12%  Similarity=0.122  Sum_probs=212.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |...|++++|+|++++|++++.||.|++||+.++........    ..|...|.+++|+|++++|++++.+
T Consensus        44 ~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d  117 (372)
T 1k8k_C           44 QVHELKE--HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI----LRINRAARCVRWAPNEKKFAVGSGS  117 (372)
T ss_dssp             EEEEEEC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC----CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             eeeeecC--CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe----ecCCCceeEEEECCCCCEEEEEeCC
Confidence            5677788  999999999999999999999999999999988764333211    1477899999999999999999999


Q ss_pred             CcEEEEeC-CCcc---E-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC------------------CCceeEEE
Q psy17902        212 SNIKLWSS-SLEH---L-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI------------------EDRAYVET  268 (454)
Q Consensus       212 g~v~vw~~-~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~------------------~~~~~~~~  268 (454)
                      |.|++|++ ....   . .....|...|.+++|+|++++|++++.||.|++||+                  ..+..+..
T Consensus       118 ~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (372)
T 1k8k_C          118 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE  197 (372)
T ss_dssp             SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE
T ss_pred             CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe
Confidence            99999999 3332   2 333678999999999999999999999999999995                  46788888


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC--C
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK--K  345 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~--~  345 (454)
                      +.+|...|.+++|+|++++|++++.|+.|++||+++++.+ .+..|...+.++.+.+++.+++++.|+.|++|++..  +
T Consensus       198 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~  277 (372)
T 1k8k_C          198 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAG  277 (372)
T ss_dssp             CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTT
T ss_pred             cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCc
Confidence            8899999999999999999999999999999999988877 777888888888887666666666999999999987  4


Q ss_pred             c--cceeeec----------------------ccC------CCCCCCCCCcEEEEEEe-cCC---CEEEEecCCCcEEEE
Q psy17902        346 V--PTHTIPV----------------------AHG------YDSSSSEPNWITSVACL-HNS---DLVASGSYDGCVKLW  391 (454)
Q Consensus       346 ~--~~~~~~~----------------------~~~------~~~~~~~~~~i~~~~~s-~~~---~~l~~~~~dg~v~iw  391 (454)
                      .  .+..+..                      ...      ......|...|++++|+ ++|   .+|++|+.||.|++|
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W  357 (372)
T 1k8k_C          278 KLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW  357 (372)
T ss_dssp             EEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEE
T ss_pred             eEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEE
Confidence            2  1111100                      000      11113577889999976 566   899999999999999


Q ss_pred             EcCCCc
Q psy17902        392 KITPKR  397 (454)
Q Consensus       392 d~~~~~  397 (454)
                      ++.+++
T Consensus       358 ~~~~~~  363 (372)
T 1k8k_C          358 DVRSLE  363 (372)
T ss_dssp             EHHHHH
T ss_pred             EecChh
Confidence            997653

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3.1e-34  Score=271.08  Aligned_cols=241  Identities=15%  Similarity=0.278  Sum_probs=203.2

Q ss_pred             CCCCceEEEEEeCC-CcEEEEecCCCcEEEEeC-C----------CccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCc
Q psy17902        188 KSYPPILALAVANN-NELVASGDNNSNIKLWSS-S----------LEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRS  254 (454)
Q Consensus       188 ~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~-~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~  254 (454)
                      .|...|++++|+|+ +.+|++++.+|.|++|++ .          ...+..+.+|...|++++|+|++. +|++|+.||.
T Consensus       126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~  205 (430)
T 2xyi_A          126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT  205 (430)
T ss_dssp             EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred             cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence            57889999999997 789999999999999998 3          467788899999999999999988 9999999999


Q ss_pred             EEEEeCCCcee-------EEEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCe---EE-EEccccCCeEEEEe
Q psy17902        255 IKVWNIEDRAY-------VETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEES---QL-VFNGHSRGIDMTRR  322 (454)
Q Consensus       255 i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~---~~-~~~~~~~~i~~~~~  322 (454)
                      |++|++..+..       ...+.+|...|.+++|+| ++.+|++++.||.|++||+++..   .. .+..|...+.++.+
T Consensus       206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~  285 (430)
T 2xyi_A          206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF  285 (430)
T ss_dssp             EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred             EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence            99999987321       345668999999999999 67899999999999999999762   33 66788899988888


Q ss_pred             cC-CC-EEEEEeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC--
Q psy17902        323 VN-DQ-QFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK--  396 (454)
Q Consensus       323 ~~-~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~--  396 (454)
                      .+ +. .|++|+.||.|++||+++ ..++..+..         |...|++++|+|++. +|++++.||.|+|||+...  
T Consensus       286 ~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~  356 (430)
T 2xyi_A          286 NPYSEFILATGSADKTVALWDLRNLKLKLHSFES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE  356 (430)
T ss_dssp             CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred             CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence            76 33 688999999999999988 455666653         345599999999985 7999999999999999872  


Q ss_pred             ------------ceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCCceeeeeeeC
Q psy17902        397 ------------RTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       397 ------------~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~~i~~W~~~~  440 (454)
                                  ..+..+..  |...|++++|+|+++ +|+++ +.|+.|++|+...
T Consensus       357 ~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~-s~dg~i~iw~~~~  410 (430)
T 2xyi_A          357 EQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSV-SEDNIMQVWQMAE  410 (430)
T ss_dssp             CCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEE-ETTSEEEEEEECH
T ss_pred             ccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEE-ECCCCEEEeEccc
Confidence                        34444443  788899999999999 55555 8999999999754

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.4e-34  Score=263.84  Aligned_cols=249  Identities=15%  Similarity=0.158  Sum_probs=216.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.+.|++++|+|++++|++++.||.|++||+.++.....+.       +...|.+++|+|++.+|++++.+
T Consensus        66 ~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~  136 (369)
T 3zwl_B           66 RLGTLDG--HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-------SPVPVKRVEFSPCGNYFLAILDN  136 (369)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-------CSSCEEEEEECTTSSEEEEEECC
T ss_pred             hhhhhhh--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-------cCCCeEEEEEccCCCEEEEecCC
Confidence            5667788  99999999999999999999999999999999988776654       56689999999999999999998


Q ss_pred             -----CcEEEEeC-CC-----------ccEEeecccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-ceeEEEeec
Q psy17902        212 -----SNIKLWSS-SL-----------EHLHTFTGHKA--PITGLAISFECDTLYSSSNDRSIKVWNIED-RAYVETLFG  271 (454)
Q Consensus       212 -----g~v~vw~~-~~-----------~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~  271 (454)
                           |.|.+|++ ..           ..+..+..|..  .+.+++|+|++++|++++.||.|++||+.+ ...+..+..
T Consensus       137 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  216 (369)
T 3zwl_B          137 VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL  216 (369)
T ss_dssp             BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred             ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence                 99999998 22           13445556666  999999999999999999999999999998 788888889


Q ss_pred             cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCC--------------C
Q psy17902        272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDG--------------T  336 (454)
Q Consensus       272 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg--------------~  336 (454)
                      |...|.+++|+|++.+|++++.|+.|++||++++.......+...+..+.+. ++.++++++.++              .
T Consensus       217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  296 (369)
T 3zwl_B          217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE  296 (369)
T ss_dssp             CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE
T ss_pred             CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce
Confidence            9999999999999999999999999999999998888544566666665554 577888888888              8


Q ss_pred             EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      +++||+.++..+..+..         |...|++++|+|++++|++++.||.|++|++..+..
T Consensus       297 i~~~d~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~  349 (369)
T 3zwl_B          297 ARFYHKIFEEEIGRVQG---------HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF  349 (369)
T ss_dssp             EEEEETTTCCEEEEEEC---------CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred             eEEEecCCCcchhheec---------ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence            99999999988887764         345599999999999999999999999999986543

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.1e-35  Score=276.48  Aligned_cols=243  Identities=14%  Similarity=0.129  Sum_probs=194.0

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC--ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSS-SL--EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-  264 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-  264 (454)
                      +..+|.+++|+|++++|++|+.||.|++|++ .+  ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.++. 
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~   89 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT   89 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence            4568999999999999999999999999999 44  5677888999999999999999999999999999999999877 


Q ss_pred             --eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE----EEEcc-ccCCeEEEEec-CCCEEEEEeCCCC
Q psy17902        265 --YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ----LVFNG-HSRGIDMTRRV-NDQQFITCGEDGT  336 (454)
Q Consensus       265 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~  336 (454)
                        ....+.+|...|.+++|+|++++|++++.|+.|++||++++..    ..+.. |...+.++.+. ++.+|++++.|+.
T Consensus        90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~  169 (377)
T 3dwl_C           90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK  169 (377)
T ss_dssp             CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred             eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence              6667788999999999999999999999999999999998763    35666 88889888776 4678999999999


Q ss_pred             EEEEecCCCcccee------------eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----ee
Q psy17902        337 LSLWSILKKVPTHT------------IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LE  400 (454)
Q Consensus       337 i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~  400 (454)
                      |++||+........            ......   . .|...|++++|+|++++|++++.||.|++||+.++..    +.
T Consensus       170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~  245 (377)
T 3dwl_C          170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE---Y-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALI  245 (377)
T ss_dssp             EEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC---C-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred             EEEEEEEecccCCCccccccccccchhhhhhc---c-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence            99999964321110            000000   0 3667799999999999999999999999999999876    66


Q ss_pred             EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .+..  |..+|++++|+|++++|+++ ++++.+ +|+..
T Consensus       246 ~~~~--~~~~v~~~~~s~~~~~l~~~-~~~~~~-~~~~~  280 (377)
T 3dwl_C          246 TVKL--SQLPLRSLLWANESAIVAAG-YNYSPI-LLQGN  280 (377)
T ss_dssp             CEEC--SSSCEEEEEEEETTEEEEEE-SSSSEE-EECCC
T ss_pred             eecC--CCCceEEEEEcCCCCEEEEE-cCCcEE-EEEeC
Confidence            6665  78899999999999988877 555555 77654

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=100.00  E-value=7.1e-34  Score=261.45  Aligned_cols=288  Identities=12%  Similarity=0.129  Sum_probs=216.5

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCc
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSN  213 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~  213 (454)
                      .+.+  |.+.|++++|+|+|++|++|+.+| +++|++.+........        ...+..+++.++++++ ++|+.++.
T Consensus        14 ~~~~--h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~~   82 (355)
T 3vu4_A           14 PENH--VSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--------MRHLSKVRMLHRTNYVAFVTGVKEV   82 (355)
T ss_dssp             -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--------CSCCCEEEECTTSSEEEEECSSTTE
T ss_pred             cccc--CCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--------cCCeEEEEEcCCCCEEEEEECCccE
Confidence            3455  999999999999999999998775 7899988765544322        1247788888888877 56777899


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEE-
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISS-  290 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~-  290 (454)
                      |++||+ ++..+..+. |...|.+++|+++.  ++++ .++.|++||+.++ +.+..+..   +...+++++  .++++ 
T Consensus        83 v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~  153 (355)
T 3vu4_A           83 VHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYS  153 (355)
T ss_dssp             EEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEE
T ss_pred             EEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEe
Confidence            999999 666666665 67799999998763  4444 4789999999988 66666544   444566666  55555 


Q ss_pred             -eeCCCcEEEeeccCCe-----------------EEEEccccCCeEEEEec-CCCEEEEEeCCCC-EEEEecCCCcccee
Q psy17902        291 -GGTDKSVRVWKIQEES-----------------QLVFNGHSRGIDMTRRV-NDQQFITCGEDGT-LSLWSILKKVPTHT  350 (454)
Q Consensus       291 -~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~-i~iwd~~~~~~~~~  350 (454)
                       |+.+|.|++||+.++.                 ...+.+|...|.++.+. ++.+|++++.||+ |++||+.+++++..
T Consensus       154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~  233 (355)
T 3vu4_A          154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE  233 (355)
T ss_dssp             ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred             CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence             6899999999999865                 45788999999888876 4678999999999 99999999999888


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce--eeEecc-------------------CCCce
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT--LEFLQD-------------------IPLSG  409 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~-------------------~~~~~  409 (454)
                      +....       |...|.+++|+|++++|++++.|++|++||+..+..  ...+..                   .....
T Consensus       234 ~~~g~-------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (355)
T 3vu4_A          234 FRRGL-------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV  306 (355)
T ss_dssp             EECTT-------CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred             EEcCC-------CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence            86320       345599999999999999999999999999976521  111110                   00122


Q ss_pred             eeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEE
Q psy17902        410 VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIID  450 (454)
Q Consensus       410 ~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~  450 (454)
                      ....++|+|||++|+++ +.||.+.+|+...+......++.
T Consensus       307 ~~~~~a~~~d~~~l~~~-~~dg~~~~~~~~~~~~~~~~~~~  346 (355)
T 3vu4_A          307 RGCKIAWISESSLVVVW-PHTRMIETFKVVFDDEMERWLIQ  346 (355)
T ss_dssp             CCCEEEESSSSEEEEEE-TTTTEEEEEEEEEETTTTEEEEE
T ss_pred             CceEEEEeCCCCEEEEE-eCCCeEEEEEEEcCCCCceEEEe
Confidence            34779999999999999 78999999998765544444443

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=4.1e-34  Score=268.47  Aligned_cols=278  Identities=17%  Similarity=0.218  Sum_probs=202.0

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC---CcEEEEecCCCcEEE
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN---NELVASGDNNSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~v~v  216 (454)
                      |...|++++|+| ++++|++++.||.|++||+.++.....+.       +...+.++.|++.   +.++++|+.+|.|++
T Consensus        98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  170 (408)
T 4a11_B           98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQL  170 (408)
T ss_dssp             CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred             CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-------CCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence            999999999999 78899999999999999999887766554       5568999999984   459999999999999


Q ss_pred             EeC-CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCce-eEEEe---------------eccCCceeE
Q psy17902        217 WSS-SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRA-YVETL---------------FGHQSAITS  278 (454)
Q Consensus       217 w~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~  278 (454)
                      ||+ .+..+..+..|...|.+++|+|++. +|++|+.||.|++||++++. .+..+               ..|...|.+
T Consensus       171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  250 (408)
T 4a11_B          171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG  250 (408)
T ss_dssp             EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred             EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence            999 6777888999999999999999998 58899999999999998765 33333               578899999


Q ss_pred             EEeecCCCEEEEeeCCCcEEEeeccCCeEEE-Eccc-----cCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902        279 LDILAKNRVISSGGTDKSVRVWKIQEESQLV-FNGH-----SRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       279 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-----~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                      ++|+|++++|++++.||.|++||+.++.... ...+     ...+ ..........+++++.++.|++||+.++.++..+
T Consensus       251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~  330 (408)
T 4a11_B          251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML  330 (408)
T ss_dssp             EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred             EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence            9999999999999999999999999876551 1111     1112 2233345667888889999999999999988877


Q ss_pred             ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                      ..         |...|++++|+|++++|++|+.||.|++|++.+++.+......     .....+.|....+.+..+.++
T Consensus       331 ~~---------~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  396 (408)
T 4a11_B          331 KG---------HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET-----TTKSQLNPAFEDAWSSSDEEG  396 (408)
T ss_dssp             CC---------CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------
T ss_pred             cc---------CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce-----EeccccccccceeecccCccC
Confidence            53         4455999999999999999999999999999988776554431     122345555555555558899


Q ss_pred             ceeeeeee
Q psy17902        432 RFGRWKTI  439 (454)
Q Consensus       432 ~i~~W~~~  439 (454)
                      .+.+|...
T Consensus       397 ~~~~W~~~  404 (408)
T 4a11_B          397 GTSAWSHP  404 (408)
T ss_dssp             --------
T ss_pred             ceeecCCc
Confidence            99999764

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=100.00  E-value=2.7e-33  Score=265.31  Aligned_cols=282  Identities=13%  Similarity=0.093  Sum_probs=233.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      ..+.+++|+|++.++++++.++.|++||+.+++........ ...+|...|.+++|++++.++++++.++.|++||+ .+
T Consensus       123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~  201 (433)
T 3bws_A          123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE-KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL  201 (433)
T ss_dssp             SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH-HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred             CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc-cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence            44669999997778888888899999999988876543321 11257789999999999999999999999999999 66


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee--------
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG--------  292 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------  292 (454)
                      ..+..+..|...+.+++|+|+++++++++ .++.|++||+.+++.+..+.. ...+.+++|+|++++|++++        
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~  280 (433)
T 3bws_A          202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQES  280 (433)
T ss_dssp             CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred             eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCcccc
Confidence            77788888999999999999999886555 799999999999988877765 45689999999999998887        


Q ss_pred             CCCcEEEeeccCCeEEEEccccCCeEEEEecC-CCE-EEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        293 TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQ-FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      .|+.|++||+.+++......+...+..+.+.+ +.. +++++.++.|++||+.+++.+..+..          ...+.++
T Consensus       281 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~----------~~~~~~~  350 (433)
T 3bws_A          281 GGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV----------FDKPNTI  350 (433)
T ss_dssp             CCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC----------SSSEEEE
T ss_pred             CCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC----------CCCCCeE
Confidence            48899999999988876555655666666654 544 45668999999999998888777652          2338999


Q ss_pred             EEecCCCEEEEecC---------------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        371 ACLHNSDLVASGSY---------------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       371 ~~s~~~~~l~~~~~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      +|+|++++|++++.               ||.|++||+.+++.+..+..   ...+.+++|+|+|++|+++++.|+.|++
T Consensus       351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v  427 (433)
T 3bws_A          351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRV  427 (433)
T ss_dssp             EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred             EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence            99999998888776               57999999999988877764   4568999999999999988567999999


Q ss_pred             eeee
Q psy17902        436 WKTI  439 (454)
Q Consensus       436 W~~~  439 (454)
                      |+..
T Consensus       428 ~~~~  431 (433)
T 3bws_A          428 YRRD  431 (433)
T ss_dssp             EEET
T ss_pred             EEec
Confidence            9874

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5e-33  Score=251.40  Aligned_cols=251  Identities=20%  Similarity=0.300  Sum_probs=213.8

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .....+..  |...|.+++|+|++++|++|+.||.|++|++.........   .....|...|.+++|  ++.+|++++.
T Consensus        50 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~--~~~~l~~~~~  122 (313)
T 3odt_A           50 WLGTVVYT--GQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL---YTLIGHQGNVCSLSF--QDGVVISGSW  122 (313)
T ss_dssp             EEEEEEEE--CSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC----CEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred             EEEEEeec--CCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc---cchhhcccCEEEEEe--cCCEEEEEeC
Confidence            34566777  9999999999999999999999999999998765322111   112368889999999  5679999999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeec-cCCceeEEEeecCCCEE
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFG-HQSAITSLDILAKNRVI  288 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l  288 (454)
                      ||.|++|| ....+..+..|...+.+++|+| ++++|++++.||.|++||  ....+..+.. |...|.+++|+|++. +
T Consensus       123 d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~  198 (313)
T 3odt_A          123 DKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-F  198 (313)
T ss_dssp             TSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred             CCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-E
Confidence            99999999 7777888899999999999988 899999999999999999  4556666666 999999999999988 8


Q ss_pred             EEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        289 SSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      ++++.||.|++||++++..+ .+..|...+.++.+.+++.|++++.||.|++||+.+++.+..+..+         ...|
T Consensus       199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~---------~~~i  269 (313)
T 3odt_A          199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLP---------AISI  269 (313)
T ss_dssp             EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECS---------SSCE
T ss_pred             EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEecc---------CceE
Confidence            89999999999999988877 6778999999999887778999999999999999999888887643         3349


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  402 (454)
                      .+++|+|++. +++++.||.|++|++.+++.....
T Consensus       270 ~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~  303 (313)
T 3odt_A          270 WSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED  303 (313)
T ss_dssp             EEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred             EEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence            9999999998 567889999999999887655443

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-34  Score=264.37  Aligned_cols=269  Identities=12%  Similarity=0.040  Sum_probs=211.1

Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc------
Q psy17902        149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE------  222 (454)
Q Consensus       149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~------  222 (454)
                      .+.+++++|++|+.||.|++||+.+++.+..+.        ...|.++.|+|+   +++++.|+.|++|+....      
T Consensus        43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~  111 (343)
T 3lrv_A           43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDS  111 (343)
T ss_dssp             SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEET
T ss_pred             hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeec
Confidence            345678899999999999999999887765543        235777788887   999999999999976422      


Q ss_pred             ----cEEee-cccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCC
Q psy17902        223 ----HLHTF-TGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       223 ----~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                          .+..+ ..|...|.+++|+|  ++++|++++.||.|++||+.+++.+..+. .|...|++++|+|++.+|++|+.|
T Consensus       112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d  191 (343)
T 3lrv_A          112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD  191 (343)
T ss_dssp             TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred             CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence                13333 36778999999999  99999999999999999999998876653 456689999999999999999999


Q ss_pred             CcEEEeeccCCeEE--EEcc-ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE--E
Q psy17902        295 KSVRVWKIQEESQL--VFNG-HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI--T  368 (454)
Q Consensus       295 g~i~i~d~~~~~~~--~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i--~  368 (454)
                      |.|++||++++...  .+.. |...+.++.+.+ +.+|++++ ++.|++||+++...+..+......      ...+  .
T Consensus       192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~  264 (343)
T 3lrv_A          192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP------EFKTGTV  264 (343)
T ss_dssp             SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----------CCE
T ss_pred             CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc------cccccce
Confidence            99999999998765  6666 889998888765 56777887 559999999998776655432111      1112  4


Q ss_pred             EEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC---CCCEEEEEecCCCceeeeeeeCCC
Q psy17902        369 SVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS---DHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~---d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +++|+|+|++|++++. |+.|++|++.........      .++..++|+|   ++..|+++ +.|+.+.++-.....
T Consensus       265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~-~~d~~~~~~~~~~~~  335 (343)
T 3lrv_A          265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVV-CGDGGIAAILKTNDS  335 (343)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEE-EETTEEEEEEECSSE
T ss_pred             EEEECCCCCEEEEecCCCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEE-ecCCceEEEEecCCe
Confidence            7999999999999988 999999999765432222      5688899999   88999988 788888888765443

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=2.6e-34  Score=269.51  Aligned_cols=273  Identities=14%  Similarity=0.188  Sum_probs=213.7

Q ss_pred             cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCCCCCCc
Q psy17902        115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDRKSYPP  192 (454)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~  192 (454)
                      +|.+..+-.............+.+  |.+.|++++|+| ++++|++|+.||.|++|++.++...... .......+|...
T Consensus        56 ~g~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~  133 (402)
T 2aq5_A           56 GGAFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR  133 (402)
T ss_dssp             SCCEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred             CCEEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence            455555543322222224455777  999999999999 8999999999999999999887432111 111122368889


Q ss_pred             eEEEEEeCCC-cEEEEecCCCcEEEEeC-CCccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        193 ILALAVANNN-ELVASGDNNSNIKLWSS-SLEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       193 v~~~~~~~~~-~~l~~~~~dg~v~vw~~-~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      |.+++|+|++ .+|++|+.||.|++||+ ++..+..+  ..|...|.+++|+|++++|++++.||.|++||+++++.+..
T Consensus       134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~  213 (402)
T 2aq5_A          134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAE  213 (402)
T ss_dssp             EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE
T ss_pred             EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeee
Confidence            9999999998 69999999999999999 67777788  78999999999999999999999999999999999999888


Q ss_pred             e-eccCCc-eeEEEeecCCCEEEEe---eCCCcEEEeeccCCeE---EEEccccCCeEEEEec-CCCEEEE-EeCCCCEE
Q psy17902        269 L-FGHQSA-ITSLDILAKNRVISSG---GTDKSVRVWKIQEESQ---LVFNGHSRGIDMTRRV-NDQQFIT-CGEDGTLS  338 (454)
Q Consensus       269 ~-~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~---~~~~~~~~~i~~~~~~-~~~~l~~-~~~dg~i~  338 (454)
                      + .+|.+. +.++.|+|++.+|++|   +.|+.|++||+++...   .....+...+..+.+. ++..|++ ++.||.|+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~  293 (402)
T 2aq5_A          214 KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR  293 (402)
T ss_dssp             EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred             eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence            8 688776 8999999999999998   7999999999998654   2333455556655554 5667754 55799999


Q ss_pred             EEecCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        339 LWSILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       339 iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      +||+.++.+ +..+....       +...|.+++|+|++.++++  .++.+++|++.++..
T Consensus       294 i~d~~~~~~~~~~l~~~~-------~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~  345 (402)
T 2aq5_A          294 YFEITSEAPFLHYLSMFS-------SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC  345 (402)
T ss_dssp             EEEECSSTTCEEEEEEEC-------CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred             EEEecCCCcceEeecccc-------cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence            999998875 44443221       2345999999999988764  466899999988643

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.8e-34  Score=267.28  Aligned_cols=257  Identities=18%  Similarity=0.256  Sum_probs=208.8

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeC----CCcc-------EEeecc---
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSS----SLEH-------LHTFTG---  229 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~----~~~~-------~~~~~~---  229 (454)
                      .+.+|++..........      .|...|.+++|+|++. +|++|+.||.|++|++    ....       ...+..   
T Consensus        26 ~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (425)
T 1r5m_A           26 IDSSDDLDGFVKILKEI------VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFA   99 (425)
T ss_dssp             --------CCCEECEEE------EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCC
T ss_pred             ccccccchhhhhheeee------eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccc
Confidence            34567665544332222      3667999999999999 9999999999999998    5433       333333   


Q ss_pred             -------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        230 -------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       230 -------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                             |...|++++|+|++++|++++.||.|++|| .++..+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus       100 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~  178 (425)
T 1r5m_A          100 LSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV  178 (425)
T ss_dssp             CC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred             ccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence                   678999999999999999999999999999 667788888899999999999999999999999999999999


Q ss_pred             cCCeEE-EEccccCC---------------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        303 QEESQL-VFNGHSRG---------------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       303 ~~~~~~-~~~~~~~~---------------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      .++... .+..+...               +.++.+.++..+++++.+|.|++||+.++..+..+..         |...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~---------~~~~  249 (425)
T 1r5m_A          179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIG---------HHGP  249 (425)
T ss_dssp             TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECC---------CSSC
T ss_pred             CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeecc---------CCCc
Confidence            988877 45555444               6677777788999999999999999999888777653         4455


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      |.+++|+|++++|++++.||.|++||+.+++.+..+..  |...|.+++|+|++ +|+++ +.|+.|++|+...+
T Consensus       250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~  320 (425)
T 1r5m_A          250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISC-SMDGSVRLWSLKQN  320 (425)
T ss_dssp             EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEE-ETTSEEEEEETTTT
T ss_pred             eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEE-eCCCcEEEEECCCC
Confidence            99999999999999999999999999999888888865  78899999999999 77777 89999999998654

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.5e-34  Score=274.18  Aligned_cols=272  Identities=15%  Similarity=0.171  Sum_probs=215.6

Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC-C---Cc-
Q psy17902        149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSS-S---LE-  222 (454)
Q Consensus       149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~-~---~~-  222 (454)
                      .|+|++..+++++      .|+.. +..+..+.     .+|...|++++|+| ++.+|++|+.||.|+|||+ .   +. 
T Consensus        34 ~f~~~~~~~~~~~------~w~~~-g~~~~~~~-----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~  101 (437)
T 3gre_A           34 EFGPIQEIVRSPN------MGNLR-GKLIATLM-----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV  101 (437)
T ss_dssp             GGCCCCCCCCCCC------GGGCC-CCEEEEEC-----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC
T ss_pred             hcCCccccccccc------ccccc-ceEEeeec-----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc
Confidence            4678887777765      37743 44444442     26889999999999 9999999999999999998 3   22 


Q ss_pred             --cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CceeEEEeec------------cCCceeEEE--eec
Q psy17902        223 --HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DRAYVETLFG------------HQSAITSLD--ILA  283 (454)
Q Consensus       223 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~  283 (454)
                        ....+ .|...|++++|+|++.+|++|+.||.|++||+.   +++.+..+..            +...+.++.  +++
T Consensus       102 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  180 (437)
T 3gre_A          102 YSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE  180 (437)
T ss_dssp             CSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred             cceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence              12232 599999999999999999999999999999994   4444433322            445566666  457


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEcc--ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNG--HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                      ++.+|++++.|+.|++||++++..+ .+..  |...+.++.+. ++.+|++|+.||.|++||++++.++..+...     
T Consensus       181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----  255 (437)
T 3gre_A          181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-----  255 (437)
T ss_dssp             SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-----
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-----
Confidence            8999999999999999999998877 5555  78888888776 5678999999999999999998888877532     


Q ss_pred             CCCCCCcEEEEEEe----cCCCEEEEecCCCcEEEEEcCCCceeeEeccC------------------------CCceee
Q psy17902        360 SSSEPNWITSVACL----HNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------------------------PLSGVI  411 (454)
Q Consensus       360 ~~~~~~~i~~~~~s----~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------------------------~~~~~v  411 (454)
                         +...|++++|+    |++.+|++|+.||.|++||+.+++.+..+...                        .|...|
T Consensus       256 ---~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v  332 (437)
T 3gre_A          256 ---DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL  332 (437)
T ss_dssp             ---TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred             ---CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCce
Confidence               23459999665    46779999999999999999998877666532                        166779


Q ss_pred             eEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       412 ~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      ++++|+ ++++|+++ +.|+.|++|+...+..
T Consensus       333 ~~l~~~-~~~~l~s~-~~d~~i~~wd~~~~~~  362 (437)
T 3gre_A          333 STISVS-NDKILLTD-EATSSIVMFSLNELSS  362 (437)
T ss_dssp             CCEEEE-TTEEEEEE-GGGTEEEEEETTCGGG
T ss_pred             EEEEEC-CceEEEec-CCCCeEEEEECCCccc
Confidence            999999 77888888 8999999999876543

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=8.1e-34  Score=269.96  Aligned_cols=251  Identities=17%  Similarity=0.260  Sum_probs=201.1

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc-----------cEEeecccC------------CCeEEEEEcCCC
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE-----------HLHTFTGHK------------APITGLAISFEC  243 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~-----------~~~~~~~~~------------~~v~~~~~~~~~  243 (454)
                      .+...|.+++|+|++.+||+|+.||.|+||++. ..           ....+.+|.            ..|++++|+|++
T Consensus        26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~  105 (447)
T 3dw8_B           26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK  105 (447)
T ss_dssp             CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred             cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence            366799999999999999999999999999984 33           367888998            889999999998


Q ss_pred             --CEEEEEeCCCcEEEEeCCCceeE---------------------------------------EE-eeccCCceeEEEe
Q psy17902        244 --DTLYSSSNDRSIKVWNIEDRAYV---------------------------------------ET-LFGHQSAITSLDI  281 (454)
Q Consensus       244 --~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~  281 (454)
                        .+|++++.|+.|++||+.++...                                       .. ..+|...|++++|
T Consensus       106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~  185 (447)
T 3dw8_B          106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI  185 (447)
T ss_dssp             SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred             CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence              79999999999999999764432                                       12 3579999999999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCC-eEEE--------EccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCcc---
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEE-SQLV--------FNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKVP---  347 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~-~~~~--------~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~---  347 (454)
                      +|++++|++| .|+.|++||+... ....        +.+|...+.++.+.+.  .+|++++.||.|++||++++..   
T Consensus       186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~  264 (447)
T 3dw8_B          186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR  264 (447)
T ss_dssp             CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred             cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence            9999999998 7999999999943 3333        4578888988888764  6999999999999999998876   


Q ss_pred             -ceeeecccCCCC---CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-CceeeEeccCCCcee------------
Q psy17902        348 -THTIPVAHGYDS---SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQDIPLSGV------------  410 (454)
Q Consensus       348 -~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~------------  410 (454)
                       +..+........   ...|...|.+++|+|++++|++++. |.|++||+.. +.++..+..  |...            
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~  341 (447)
T 3dw8_B          265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV--HEYLRSKLCSLYENDC  341 (447)
T ss_dssp             TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES--CGGGTTTHHHHHHTSG
T ss_pred             eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec--cccccccccccccccc
Confidence             455443221000   0001125999999999999999999 9999999987 777777765  3321            


Q ss_pred             ---eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        411 ---INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       411 ---v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                         +..++|+|++++|+++ +.|+.|++|+...+..
T Consensus       342 i~~~~~~~~s~~~~~l~s~-s~dg~v~iwd~~~~~~  376 (447)
T 3dw8_B          342 IFDKFECCWNGSDSVVMTG-SYNNFFRMFDRNTKRD  376 (447)
T ss_dssp             GGCCCCEEECTTSSEEEEE-CSTTEEEEEETTTCCE
T ss_pred             cccceEEEECCCCCEEEEe-ccCCEEEEEEcCCCcc
Confidence               3349999999999888 8999999999877643

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.2e-34  Score=288.35  Aligned_cols=248  Identities=17%  Similarity=0.322  Sum_probs=210.2

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCC
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~  261 (454)
                      .+|.+.|++++|+|++++|++|+.||.|+||++.   ...+..+.+|.++|++++|+|+  +++|++|+.||.|++||+.
T Consensus         6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~   85 (753)
T 3jro_A            6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE   85 (753)
T ss_dssp             --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred             ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence            3799999999999999999999999999999983   3556788899999999999988  9999999999999999999


Q ss_pred             Cce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecC----------
Q psy17902        262 DRA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVN----------  324 (454)
Q Consensus       262 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~----------  324 (454)
                      ++.  .+..+.+|...|++++|+|+  +++|++|+.||.|++||++++.   ...+.+|...+.++.+.+          
T Consensus        86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~  165 (753)
T 3jro_A           86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN  165 (753)
T ss_dssp             TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred             CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence            886  67777889999999999999  9999999999999999998873   336778888998888876          


Q ss_pred             ----CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC---CCEEEEecCCCcEEEEEcCCCc
Q psy17902        325 ----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN---SDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       325 ----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                          +..+++|+.||.|++||++++..........     ..|...|++++|+|+   +.+|++|+.||.|++||+.++.
T Consensus       166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-----~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~  240 (753)
T 3jro_A          166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-----EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ  240 (753)
T ss_dssp             -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE-----CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred             cCCCCCEEEEEECCCeEEEEeccCCcccceeeeee-----cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence                6789999999999999998874432222111     125666999999999   8999999999999999998863


Q ss_pred             ee---eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        398 TL---EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       398 ~~---~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ..   .......+.+.|++++|+|+|++|+++ +.||.|++|+...
T Consensus       241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~Dg~I~vwd~~~  285 (753)
T 3jro_A          241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENL  285 (753)
T ss_dssp             SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CSSSCEECCBCCS
T ss_pred             CcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cCCCEEEEEecCC
Confidence            11   222223477889999999999999998 8899999999874

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=8.4e-34  Score=259.98  Aligned_cols=244  Identities=14%  Similarity=0.126  Sum_probs=205.7

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc----EEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC-C
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH----LHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNI-E  261 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~-~  261 (454)
                      +|...|.+++|+|++.+|++++.||.|++|++....    ...+..|...|.+++|+|+++ +|++|+.||.|++||+ .
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~   88 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG   88 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence            688899999999999999999999999999994333    566678999999999999999 9999999999999999 8


Q ss_pred             CceeEEEeec--cCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---------CeEEEEccccCCeEEEEecCCCEEEE
Q psy17902        262 DRAYVETLFG--HQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---------ESQLVFNGHSRGIDMTRRVNDQQFIT  330 (454)
Q Consensus       262 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~i~~~~~~~~~~l~~  330 (454)
                      ++.. ..+.+  |...|.+++|+| +++|++++.|+.|++||+++         ...+....+...+.++.+.++. +++
T Consensus        89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~  165 (342)
T 1yfq_A           89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIV  165 (342)
T ss_dssp             SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEE
T ss_pred             CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEE
Confidence            7754 67778  999999999999 99999999999999999987         5555333477888888887665 999


Q ss_pred             EeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCC------ceeeEe
Q psy17902        331 CGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPK------RTLEFL  402 (454)
Q Consensus       331 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~------~~~~~~  402 (454)
                      ++.++.|++||+.+ +.........       .+...+.+++|+| ++++|++++.||.|++|++...      .....+
T Consensus       166 ~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~  238 (342)
T 1yfq_A          166 GMNNSQVQWFRLPLCEDDNGTIEES-------GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF  238 (342)
T ss_dssp             EESTTEEEEEESSCCTTCCCEEEEC-------SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred             EeCCCeEEEEECCccccccceeeec-------CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence            99999999999987 5432222111       1345599999999 9999999999999999999876      666666


Q ss_pred             ccCC-------CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        403 QDIP-------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       403 ~~~~-------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ....       |.+.|++++|+|++++|+++ +.|+.|++|+...+.
T Consensus       239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~  284 (342)
T 1yfq_A          239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA-GSDGIISCWNLQTRK  284 (342)
T ss_dssp             ECCCCCTTCCSSCCCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTE
T ss_pred             ecccccccccccceeEEEEEEcCCCCEEEEe-cCCceEEEEcCccHh
Confidence            6521       24489999999999999988 799999999987653

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=1.4e-33  Score=259.89  Aligned_cols=250  Identities=14%  Similarity=0.207  Sum_probs=200.1

Q ss_pred             CCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEE------eCCCcEEEEecC
Q psy17902        141 HRASITCIAVTSD---SKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAV------ANNNELVASGDN  210 (454)
Q Consensus       141 h~~~V~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~  210 (454)
                      |...|++++|+|+   +++|++|+.||.|++||+.++. ....+.      +|...|.+++|      +|++++|++|+.
T Consensus        64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~s~~~~~l~~~~~  137 (357)
T 3i2n_A           64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK------GHKEIINAIDGIGGLGIGEGAPEIVTGSR  137 (357)
T ss_dssp             ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC------CCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred             ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE------ecccceEEEeeccccccCCCccEEEEEeC
Confidence            9999999999998   6999999999999999999876 444443      68889999955      678999999999


Q ss_pred             CCcEEEEeC-CCc-cEEeecccCC----CeEEEE----EcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        211 NSNIKLWSS-SLE-HLHTFTGHKA----PITGLA----ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       211 dg~v~vw~~-~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      ||.|++||+ ... .+..+..|.+    .+.+++    |+|++.+|++++.||.|++||+++++.... ..|...|.+++
T Consensus       138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~  216 (357)
T 3i2n_A          138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLE  216 (357)
T ss_dssp             TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEE
T ss_pred             CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEE
Confidence            999999999 443 5677766555    899998    678999999999999999999999887544 57899999999


Q ss_pred             eec---CCCEEEEeeCCCcEEEeeccCCeEE-E-----EccccCCeEEEEecCC-C-EEEEEeCCCCEEEEecCCCccce
Q psy17902        281 ILA---KNRVISSGGTDKSVRVWKIQEESQL-V-----FNGHSRGIDMTRRVND-Q-QFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       281 ~~~---~~~~l~~~~~dg~i~i~d~~~~~~~-~-----~~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      |+|   ++.+|++++.||.|++||++++... .     +..|...+.++.+.+. . +|++++.||.|++||+.......
T Consensus       217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  296 (357)
T 3i2n_A          217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRS  296 (357)
T ss_dssp             ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC-
T ss_pred             cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccc
Confidence            999   8999999999999999999876544 2     3378889988887764 4 68999999999999998654331


Q ss_pred             eeecccC----------CCCCCCCCCcEEEEEEecCCCEEE-EecCCCcEEEEEcCCCc
Q psy17902        350 TIPVAHG----------YDSSSSEPNWITSVACLHNSDLVA-SGSYDGCVKLWKITPKR  397 (454)
Q Consensus       350 ~~~~~~~----------~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~v~iwd~~~~~  397 (454)
                      .......          ......|...|++++|+|++++|+ +++.||.|++|++.+..
T Consensus       297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~  355 (357)
T 3i2n_A          297 KKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN  355 (357)
T ss_dssp             -CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred             cccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence            1100000          000112566699999999999888 89999999999998654

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=1.5e-33  Score=266.41  Aligned_cols=257  Identities=15%  Similarity=0.250  Sum_probs=206.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecc----cCCcccCCCCCCceEEEEEeCCCc-EE
Q psy17902        132 VCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCS----SPFVKTDRKSYPPILALAVANNNE-LV  205 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l  205 (454)
                      ....+.+  |.+.|++++|+|+ +.+|++++.+|.|++|++.+......    ........+|...|.+++|+|++. +|
T Consensus       120 ~~~~~~~--h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l  197 (430)
T 2xyi_A          120 EIEIKIN--HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL  197 (430)
T ss_dssp             EEEEEEE--ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEE
T ss_pred             EEEEEEc--CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeE
Confidence            3445556  9999999999997 78999999999999999986211000    111112226888999999999988 99


Q ss_pred             EEecCCCcEEEEeCCC-c---c----EEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCc---eeEEEeeccC
Q psy17902        206 ASGDNNSNIKLWSSSL-E---H----LHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQ  273 (454)
Q Consensus       206 ~~~~~dg~v~vw~~~~-~---~----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~  273 (454)
                      ++|+.||.|++|++.. .   .    ...+..|...|.+++|+| ++.+|++++.||.|++||++++   ..+..+..|.
T Consensus       198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~  277 (430)
T 2xyi_A          198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT  277 (430)
T ss_dssp             EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred             EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence            9999999999999943 1   1    456678999999999999 6789999999999999999987   5667778999


Q ss_pred             CceeEEEeecCCC-EEEEeeCCCcEEEeeccCCe-E-EEEccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCccc
Q psy17902        274 SAITSLDILAKNR-VISSGGTDKSVRVWKIQEES-Q-LVFNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       274 ~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~-~~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ..|++++|+|++. +|++|+.||.|++||+++.. . ..+..|...+.++.+.+.  ..|++++.||.|++||+......
T Consensus       278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~  357 (430)
T 2xyi_A          278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE  357 (430)
T ss_dssp             SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred             CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence            9999999999986 78899999999999999743 3 377788999988888764  36889999999999999763211


Q ss_pred             -----------eeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902        349 -----------HTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       349 -----------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~  396 (454)
                                 ..+..      ...|...|++++|+|++. +|++++.||.|+||++...
T Consensus       358 ~~~~~~~~~~~~~~~~------~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~  411 (430)
T 2xyi_A          358 QSTEDAEDGPPELLFI------HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN  411 (430)
T ss_dssp             CCHHHHHHCCTTEEEE------CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred             cCccccccCCcceEEE------cCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence                       11111      113566699999999999 9999999999999998754

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3e-33  Score=264.97  Aligned_cols=256  Identities=21%  Similarity=0.438  Sum_probs=204.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....+.+  |.+.|++++|  ++++|++|+.||.|++||+.++.....+.      .|...|.+++|++  .+|++|+.|
T Consensus       165 ~~~~~~~--h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~~~--~~l~s~s~d  232 (435)
T 1p22_A          165 CKRILTG--HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI------HHCEAVLHLRFNN--GMMVTCSKD  232 (435)
T ss_dssp             EEEEECC--CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC------CCCSCEEEEECCT--TEEEEEETT
T ss_pred             EEEEEcC--CCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc------CCCCcEEEEEEcC--CEEEEeeCC
Confidence            4567788  9999999999  67899999999999999999988877665      5888999999974  599999999


Q ss_pred             CcEEEEeC-CCccE---EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 SNIKLWSS-SLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 g~v~vw~~-~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      |.|++||+ ....+   ..+.+|...|.+++|  ++++|++|+.||.|++||+.+++.+..+.+|...|.++.++  +++
T Consensus       233 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~  308 (435)
T 1p22_A          233 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRL  308 (435)
T ss_dssp             SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTE
T ss_pred             CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCE
Confidence            99999999 44333   667889999999999  67899999999999999999999999999999999999994  689


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc---------cceeeecccCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV---------PTHTIPVAHGY  357 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~  357 (454)
                      |++|+.||.|++||++++..+ .+.+|...+.++.+ ++.+|++|+.||.|++||+.++.         ++..+.     
T Consensus       309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~-----  382 (435)
T 1p22_A          309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV-----  382 (435)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-----
T ss_pred             EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc-----
Confidence            999999999999999998877 78889999998888 78899999999999999997654         333332     


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                          .|...|.+++|  ++.+|++|+.||+|++||+.+........   ...+..++.|.+
T Consensus       383 ----~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~  434 (435)
T 1p22_A          383 ----EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP---PRSPSRTYTYIS  434 (435)
T ss_dssp             ----CCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------------------------
T ss_pred             ----CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC---CCCCccceeeec
Confidence                24556999999  77899999999999999998765444332   334455565543

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=7.4e-32  Score=244.35  Aligned_cols=247  Identities=16%  Similarity=0.258  Sum_probs=205.3

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      +.+....|...|++++|+|++++|++|+.||.|++|++.+++.+..+.      +|...+.++.+  ++.++++|+.++.
T Consensus        59 ~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~------~h~~~~~~~~~--~~~~l~s~~~~~~  130 (318)
T 4ggc_A           59 QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT------SHSARVGSLSW--NSYILSSGSRSGH  130 (318)
T ss_dssp             EEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred             EEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec------CccceEEEeec--CCCEEEEEecCCc
Confidence            334433399999999999999999999999999999999998877665      57777766554  5679999999999


Q ss_pred             EEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee----EEEeeccCCceeEEEeecCCCE
Q psy17902        214 IKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY----VETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       214 v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      +.+|+.  ....+..+.+|...+.++.|++++.+|++++.||.|++||+.+++.    ......|.+.|.++.++|.+..
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  210 (318)
T 4ggc_A          131 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN  210 (318)
T ss_dssp             EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred             eEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence            999998  4456678889999999999999999999999999999999987653    3445568889999999988753


Q ss_pred             ---EEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        288 ---ISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       288 ---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                         +++++.++.|++||...........+...+..+.+ +.+..+++++  .|+.|++||+.+++++..+..        
T Consensus       211 ~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--------  282 (318)
T 4ggc_A          211 VLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--------  282 (318)
T ss_dssp             EEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--------
T ss_pred             EEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--------
Confidence               34677889999999999888866666666655554 4566666654  799999999999999888753        


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                       |...|++++|+|+|++|++|+.||+|+|||+....
T Consensus       283 -H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d  317 (318)
T 4ggc_A          283 -HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  317 (318)
T ss_dssp             -CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred             -CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence             55669999999999999999999999999997543

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=2.9e-33  Score=261.08  Aligned_cols=240  Identities=13%  Similarity=0.147  Sum_probs=171.8

Q ss_pred             EEEEeCCCcEEEEecCCCcEEEEeCC-Ccc-----EEeecccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEeC
Q psy17902        195 ALAVANNNELVASGDNNSNIKLWSSS-LEH-----LHTFTGHKAPITGLAISF--------ECDTLYSSSNDRSIKVWNI  260 (454)
Q Consensus       195 ~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd~  260 (454)
                      ...+++++.+|++|+.|++|+|||.. +..     +..+.+|.+.|++++|+|        ++++|++|+.|++|+|||+
T Consensus        94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~  173 (393)
T 4gq1_A           94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL  173 (393)
T ss_dssp             ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred             eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence            33444567789999999999999983 322     234678999999999998        7889999999999999999


Q ss_pred             CCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEE--------------------------Eccc
Q psy17902        261 EDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLV--------------------------FNGH  313 (454)
Q Consensus       261 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~--------------------------~~~~  313 (454)
                      .++..+..+..|...|.+++|+|++ ++|++++.|++|++||++++....                          ..+|
T Consensus       174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~  253 (393)
T 4gq1_A          174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI  253 (393)
T ss_dssp             ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred             CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence            9888888888999999999999987 589999999999999998765431                          1234


Q ss_pred             cCCeEEEEe--cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC----------CCCCCcEEEEEEec--CCCEE
Q psy17902        314 SRGIDMTRR--VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS----------SSEPNWITSVACLH--NSDLV  379 (454)
Q Consensus       314 ~~~i~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~~~~s~--~~~~l  379 (454)
                      ...+.++.+  +++..+++++.|+.+++||+..+.....+.........          ..+.. .....|+|  ++.++
T Consensus       254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  332 (393)
T 4gq1_A          254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFA  332 (393)
T ss_dssp             SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC-SSCCEECSSCTTEEE
T ss_pred             cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-ceeEEEccCCCCEEE
Confidence            445555554  46789999999999999999877665544322211000          00111 12233443  34477


Q ss_pred             EEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        380 ASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       380 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++|+.||+|++||+.++.....+..  |..+|.+++|+|||++||++ +.+ .+.+|...
T Consensus       333 ~sgs~Dg~V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~a-s~~-Gv~lvrL~  388 (393)
T 4gq1_A          333 TAHSQHGLIQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIA-TEG-SVLLTRLM  388 (393)
T ss_dssp             EEETTTTEEEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEE-ESS-EEEEEEEG
T ss_pred             EEECCCCEEEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEE-eCC-CeEEEEEe
Confidence            8889999999999999987776665  77899999999999999988 544 46666543

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2.1e-31  Score=248.72  Aligned_cols=265  Identities=10%  Similarity=0.091  Sum_probs=214.7

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTGHKA  232 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~~~~  232 (454)
                      .++++++.|+.|++||+.+++....+.       +...+.+++|+|++++| ++++.++.|++||+ +++.+..+..+. 
T Consensus         3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-   74 (391)
T 1l0q_A            3 FAYIANSESDNISVIDVTSNKVTATIP-------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-   74 (391)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEEEE-------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred             EEEEEcCCCCEEEEEECCCCeEEEEee-------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence            467888899999999999988776654       23458999999999976 67778999999999 666666666554 


Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEeeCCCcEEEeeccCCeEEEE
Q psy17902        233 PITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGGTDKSVRVWKIQEESQLVF  310 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~  310 (454)
                      .+.+++|+|++++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.| ++++.++.|++||+.+++....
T Consensus        75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~  153 (391)
T 1l0q_A           75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT  153 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred             CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence            999999999999886555 6799999999999988777644 568999999999877 6888899999999999887743


Q ss_pred             ccccCCeEEEEec-CCCEE-EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec---CC
Q psy17902        311 NGHSRGIDMTRRV-NDQQF-ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS---YD  385 (454)
Q Consensus       311 ~~~~~~i~~~~~~-~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d  385 (454)
                      ......+..+.+. ++..+ ++++.++.|++||+.++.....+..          ...+.+++|+|++++|++++   .+
T Consensus       154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------~~~~~~~~~~~~g~~l~~~~~~~~~  223 (391)
T 1l0q_A          154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV----------EAAPSGIAVNPEGTKAYVTNVDKYF  223 (391)
T ss_dssp             EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----------SSEEEEEEECTTSSEEEEEEECSSC
T ss_pred             EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec----------CCCccceEECCCCCEEEEEecCcCC
Confidence            3333444555554 56666 5677889999999999887776653          23489999999999988887   68


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +.|++||+.+++.+..+..  + ..+.+++|+|+|++|+++++.|+.|++|+...+
T Consensus       224 ~~v~~~d~~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~  276 (391)
T 1l0q_A          224 NTVSMIDTGTNKITARIPV--G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN  276 (391)
T ss_dssp             CEEEEEETTTTEEEEEEEC--C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred             CcEEEEECCCCeEEEEEec--C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence            9999999999888877764  2 357899999999999777689999999998765

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=7.7e-33  Score=255.35  Aligned_cols=248  Identities=13%  Similarity=0.150  Sum_probs=192.9

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEe-----------CCCeEEEEEcCCCceecccCC---cccCCCCCCceEEEEEeC
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSAC-----------KDGIIIKWLLETRSKVCSSPF---VKTDRKSYPPILALAVAN  200 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~-----------~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~  200 (454)
                      .|.+  |...|.++++++  +.+++|+           .|+.+++|++...........   ......+...+.+++|+|
T Consensus        68 ~l~~--~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp  143 (365)
T 4h5i_A           68 ALED--NDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR  143 (365)
T ss_dssp             ECCT--TSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred             EccC--CCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC
Confidence            4566  999999988754  6777664           467899999876432211100   011123445689999999


Q ss_pred             CCcEEEE--ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE--EeeccCCc
Q psy17902        201 NNELVAS--GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE--TLFGHQSA  275 (454)
Q Consensus       201 ~~~~l~~--~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~  275 (454)
                      ||++|++  ++.|++|+|||+ ++..+..+. |...|.+++|+|+|++|++++.+ .+.+|+..++..+.  ....|...
T Consensus       144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~  221 (365)
T 4h5i_A          144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWS  221 (365)
T ss_dssp             TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEE
T ss_pred             CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCC
Confidence            9998765  446899999999 556666654 78899999999999999999855 56677777666553  34568899


Q ss_pred             eeEEEeecCCCEEEEeeCCC----cEEEeeccCCeEE-----EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC
Q psy17902        276 ITSLDILAKNRVISSGGTDK----SVRVWKIQEESQL-----VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK  345 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~  345 (454)
                      |.+++|+|++.++++++.|+    .+++|++......     .+.+|...|.++.++ ++.+|++|+.|++|+|||+.++
T Consensus       222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~  301 (365)
T 4h5i_A          222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL  301 (365)
T ss_dssp             EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred             EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence            99999999999999999887    6888998876543     466788888877765 5778999999999999999999


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      +++..+...        |...|++++|+|+|++||+|+.|++|+||++...
T Consensus       302 ~~~~~~~~g--------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~  344 (365)
T 4h5i_A          302 SMSKIFKQA--------HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN  344 (365)
T ss_dssp             EEEEEETTS--------SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred             cEEEEecCc--------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence            988876432        4566999999999999999999999999999644

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.7e-31  Score=245.57  Aligned_cols=242  Identities=14%  Similarity=0.279  Sum_probs=197.5

Q ss_pred             CCCCceEEEEEeCC---CcEEEEecCCCcEEEEeCC--CccE-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        188 KSYPPILALAVANN---NELVASGDNNSNIKLWSSS--LEHL-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       188 ~~~~~v~~~~~~~~---~~~l~~~~~dg~v~vw~~~--~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      +|...|++++|+|+   |.+|++|+.||.|++|++.  +..+ ..+.+|...|++++|+|++++|++++.||.|++||+.
T Consensus        37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~  116 (368)
T 3mmy_A           37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS  116 (368)
T ss_dssp             CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence            68999999999999   6999999999999999994  4444 6788899999999999999999999999999999999


Q ss_pred             CceeEEEeeccCCceeEEEe--ecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902        262 DRAYVETLFGHQSAITSLDI--LAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       262 ~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                      ++..+. +..|...|++++|  +|++.+|++++.||.|++||+++++.+........+.++.+. ...+++++.++.+.+
T Consensus       117 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~  194 (368)
T 3mmy_A          117 SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI-YPMAVVATAERGLIV  194 (368)
T ss_dssp             TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE-TTEEEEEEGGGCEEE
T ss_pred             CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec-CCeeEEEeCCCcEEE
Confidence            998776 5579999999999  889999999999999999999988776333333344444443 457888999999999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE----EEEecCCCcEEEEEcCCC---ceeeEeccCCCce---
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL----VASGSYDGCVKLWKITPK---RTLEFLQDIPLSG---  409 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~---  409 (454)
                      |++.............       +...+.++.+.++...    +++++.||.|++|++...   ..+..+..  |..   
T Consensus       195 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~~~~~~  265 (368)
T 3mmy_A          195 YQLENQPSEFRRIESP-------LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC--HRSNGT  265 (368)
T ss_dssp             EECSSSCEEEEECCCS-------CSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC--SEEC--
T ss_pred             EEeccccchhhhcccc-------ccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee--eecccc
Confidence            9998764433322111       2233677777766654    999999999999999887   44555554  444   


Q ss_pred             ---------eeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        410 ---------VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       410 ---------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                               .|++++|+|++++|+++ +.|+.|++|+...+
T Consensus       266 ~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~~~  305 (368)
T 3mmy_A          266 NTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKDAR  305 (368)
T ss_dssp             --CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETTTT
T ss_pred             cccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECCCC
Confidence                     69999999999999998 89999999998764

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.1e-30  Score=248.37  Aligned_cols=238  Identities=12%  Similarity=0.128  Sum_probs=199.3

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc---cEEeec--------------------------------------
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSS-SLE---HLHTFT--------------------------------------  228 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~---~~~~~~--------------------------------------  228 (454)
                      .++.+++|+++|++|+++. ++.|++||+ ++.   .+..+.                                      
T Consensus         5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            3789999999999777664 789999998 665   444443                                      


Q ss_pred             ----------------ccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CceeEEEee--ccCCceeEEEeecCCCE
Q psy17902        229 ----------------GHKAPITGLAISFECDTL-YSSSNDRSIKVWNIE--DRAYVETLF--GHQSAITSLDILAKNRV  287 (454)
Q Consensus       229 ----------------~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~  287 (454)
                                      .|.+.|++++|+|++++| ++++.||.|++||+.  ++..+..+.  .|...|++++|+|++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  163 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT  163 (450)
T ss_dssp             ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred             ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence                            233479999999999996 889899999999999  888887775  56789999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      |++|+.+|.|++|++.++...     .+.+|...+.++.+.+    +.+|++++.|+.|++||+.++..+..+..     
T Consensus       164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-----  238 (450)
T 2vdu_B          164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF-----  238 (450)
T ss_dssp             EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC-----
T ss_pred             EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec-----
Confidence            999999999999999876643     5667888888887765    45899999999999999998887766432     


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-----------------------CCceeeeEEE
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-----------------------PLSGVINSLV  415 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~l~  415 (454)
                         .|...|++++|+ ++.+|++|+.|++|++||+.+++.+..+...                       .....|.+++
T Consensus       239 ---~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~  314 (450)
T 2vdu_B          239 ---GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII  314 (450)
T ss_dssp             ---CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred             ---CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence               245669999999 9999999999999999999999887776531                       1235689999


Q ss_pred             EcCCCCEEEEEecCCCceeeeee
Q psy17902        416 FTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       416 ~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      |+|++++|+++++.++.|++|+.
T Consensus       315 ~~~~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          315 KSKNLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             ECSSSSEEEEEETTCSEEEEEEE
T ss_pred             EeCCCCEEEEEECCCCeEEEEEe
Confidence            99999999999658999999999

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=100.00  E-value=2.4e-29  Score=234.77  Aligned_cols=251  Identities=14%  Similarity=0.081  Sum_probs=201.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-Eec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~  209 (454)
                      ....+.+  |. .+.+++|+|++++| ++++.|+.|++||+.+++....+.       +...+.+++|+|++++|+ +++
T Consensus        24 ~~~~~~~--~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~v~~~~~spdg~~l~~~~~   93 (391)
T 1l0q_A           24 VTATIPV--GS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-------AGSSPQGVAVSPDGKQVYVTNM   93 (391)
T ss_dssp             EEEEEEC--SS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-------CSSSEEEEEECTTSSEEEEEET
T ss_pred             EEEEeec--CC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-------CCCCccceEECCCCCEEEEEEC
Confidence            3445555  54 48999999999987 566789999999999988776654       223899999999999875 455


Q ss_pred             CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      .++.|++||+ .++.+..+. +...+.+++|+|+++.| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++
T Consensus        94 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~  171 (391)
T 1l0q_A           94 ASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTK  171 (391)
T ss_dssp             TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSE
T ss_pred             CCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCE
Confidence            6799999999 455555555 45578999999999977 67778999999999999988887655 45699999999987


Q ss_pred             E-EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEe---CCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        288 I-SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCG---EDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       288 l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      | ++++.++.|++||++++.......+...+..+.+. ++.++++++   .++.|++||+.+++.+..+....       
T Consensus       172 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-------  244 (391)
T 1l0q_A          172 VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-------  244 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-------
T ss_pred             EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-------
Confidence            7 67788999999999998887555555556655554 566787777   68999999999998877776422       


Q ss_pred             CCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCCceeeEecc
Q psy17902        363 EPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                         .+.+++|+|++++| ++++.|+.|++||+.+++.+..+..
T Consensus       245 ---~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~  284 (391)
T 1l0q_A          245 ---DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV  284 (391)
T ss_dssp             ---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ---CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence               28899999999977 6778899999999999988777654

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1e-31  Score=250.56  Aligned_cols=243  Identities=9%  Similarity=0.096  Sum_probs=177.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--------CCcEEEEecCCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--------NNELVASGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg  212 (454)
                      |...+....+++++.+|++|+.|++|+|||+.++...... ......+|...|.+++|+|        ++++||+|+.|+
T Consensus        88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~-~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~  166 (393)
T 4gq1_A           88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQH-VLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC  166 (393)
T ss_dssp             ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEE-EECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred             cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceee-eecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence            4444555555667789999999999999999887654321 1223347999999999998        789999999999


Q ss_pred             cEEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEE----------------------
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVET----------------------  268 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----------------------  268 (454)
                      +|+|||+ ....+..+..|..+|.+++|+|++ .+|++|+.||+|++||+.+++....                      
T Consensus       167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~  246 (393)
T 4gq1_A          167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN  246 (393)
T ss_dssp             EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred             eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence            9999999 677788888899999999999987 4899999999999999987654322                      


Q ss_pred             ---eeccCCceeEEEee-cCCCEEEEeeCCCcEEEeeccCCeEE-EEcccc-------------------CCeEEEEecC
Q psy17902        269 ---LFGHQSAITSLDIL-AKNRVISSGGTDKSVRVWKIQEESQL-VFNGHS-------------------RGIDMTRRVN  324 (454)
Q Consensus       269 ---~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------------------~~i~~~~~~~  324 (454)
                         ..+|...|.++.|+ +++..|++++.|+.+++||+..+... .+..+.                   ..+.+++++.
T Consensus       247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (393)
T 4gq1_A          247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR  326 (393)
T ss_dssp             -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred             eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence               23577889999997 78999999999999999999876543 222221                   1223334432


Q ss_pred             -CC-EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        325 -DQ-QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       325 -~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                       +. ++++|+.||.|++||+.++........         |..+|.+++|+|+|++||+++.+| +.+|.+.
T Consensus       327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---------~~~~V~svafspdG~~LA~as~~G-v~lvrL~  388 (393)
T 4gq1_A          327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---------LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM  388 (393)
T ss_dssp             CTTEEEEEETTTTEEEEEETTCTTCCEEEEE---------CSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred             CCCEEEEEECCCCEEEEEECCCCcEEEEecC---------CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence             33 455677899999999999887776543         334599999999999999999776 7777653

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=6.1e-31  Score=241.15  Aligned_cols=278  Identities=19%  Similarity=0.201  Sum_probs=194.4

Q ss_pred             cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceeccc---CCcccCCCC
Q psy17902        115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTS--DSKHVYSACKDGIIIKWLLETRSKVCSS---PFVKTDRKS  189 (454)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~  189 (454)
                      ++.+..|-...-.........+.+  |...|++++|+|  ++++|++|+.||.|++||+.++......   ........|
T Consensus        32 dg~i~iw~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~  109 (351)
T 3f3f_A           32 DQHIKVFKLDKDTSNWELSDSWRA--HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS  109 (351)
T ss_dssp             TSEEEEEEECSSSCCEEEEEEEEC--CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred             CCeEEEEECCCCCCcceecceecc--CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc
Confidence            344555544333333346677888  999999999999  6999999999999999999876421100   011112258


Q ss_pred             CCceEEEEEeCC--CcEEEEecCCCcEEEEeC-CCccEEee-------------cccCCCeEEEEEcCC---CCEEEEEe
Q psy17902        190 YPPILALAVANN--NELVASGDNNSNIKLWSS-SLEHLHTF-------------TGHKAPITGLAISFE---CDTLYSSS  250 (454)
Q Consensus       190 ~~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~-~~~~~~~~-------------~~~~~~v~~~~~~~~---~~~l~~~~  250 (454)
                      ...|.+++|+|+  +.+|++++.||.|++||+ ....+..+             ..|...+.+++|+|+   +.+|++++
T Consensus       110 ~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~  189 (351)
T 3f3f_A          110 KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA  189 (351)
T ss_dssp             SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE
T ss_pred             CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec
Confidence            889999999999  999999999999999998 44333222             268889999999997   89999999


Q ss_pred             CCCcEEEEeCCCcee--EEEeeccCCceeEEEeecCC----CEEEEeeCCCcEEEeeccCCeEEEE-ccccCCeEEEEec
Q psy17902        251 NDRSIKVWNIEDRAY--VETLFGHQSAITSLDILAKN----RVISSGGTDKSVRVWKIQEESQLVF-NGHSRGIDMTRRV  323 (454)
Q Consensus       251 ~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~i~~~~~~  323 (454)
                      .++.+.+|+...+..  +..+.+|...|++++|+|++    ++|++++.||.|++||++.+..... ..+..........
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  269 (351)
T 3f3f_A          190 LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNS  269 (351)
T ss_dssp             TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------
T ss_pred             CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCC
Confidence            999998888877765  66777899999999999998    8999999999999999997655421 1111111111111


Q ss_pred             C-CCEE----EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        324 N-DQQF----ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       324 ~-~~~l----~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      . ...+    ..+.....+.+|+......+..+..         |...|++++|+|++++|++|+.||.|++|++.++..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~  340 (351)
T 3f3f_A          270 ADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD---------HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE  340 (351)
T ss_dssp             ---------------------CCSEEEEEEEEECT---------TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred             cccccccccccccccceeeeecccccccEEEEEec---------ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence            1 1111    2223444556666555555555542         455699999999999999999999999999998876


Q ss_pred             eeEec
Q psy17902        399 LEFLQ  403 (454)
Q Consensus       399 ~~~~~  403 (454)
                      +..+.
T Consensus       341 ~~~~~  345 (351)
T 3f3f_A          341 FKCMS  345 (351)
T ss_dssp             EEEEE
T ss_pred             hhhee
Confidence            66554

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.98  E-value=2.6e-30  Score=237.71  Aligned_cols=235  Identities=10%  Similarity=0.103  Sum_probs=180.9

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~  266 (454)
                      .|...|.+++|+|+|++|++|+.+| ++||++......... +...+..+++.++++.+ ++++.|++|++||+.+++.+
T Consensus        17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~   94 (355)
T 3vu4_A           17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV   94 (355)
T ss_dssp             --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred             cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence            5888999999999999999998775 789998433222222 22357888899888877 56778899999999999998


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEecCCCEEEE--EeCCCCEEEEec
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRVNDQQFIT--CGEDGTLSLWSI  342 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~~~~~l~~--~~~dg~i~iwd~  342 (454)
                      ..+. +...|.++.++++.  ++++ .++.|++||+.+. +.+ .+..   ....+.+.. ..+++  |+.+|.|++||+
T Consensus        95 ~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~  166 (355)
T 3vu4_A           95 SRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHITKL  166 (355)
T ss_dssp             EEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEEEC
T ss_pred             EEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEEEC
Confidence            8876 67799999998754  4433 4789999999987 444 2222   222333333 66665  579999999999


Q ss_pred             CCCcc----------------ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc-EEEEEcCCCceeeEeccC
Q psy17902        343 LKKVP----------------THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC-VKLWKITPKRTLEFLQDI  405 (454)
Q Consensus       343 ~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~~  405 (454)
                      .++..                +..+.         .|...|++++|+|+|.+|++|+.||+ |++||+.+++.+..+...
T Consensus       167 ~~~~~~~~~~~~~~~~~~~p~~~~~~---------~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g  237 (355)
T 3vu4_A          167 QSSGSATTQDQGVQQKAILGKGVLIK---------AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG  237 (355)
T ss_dssp             CC------------------CCEEEC---------CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred             CCCCccccccccccccccCcccEEEE---------ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence            87651                23332         36667999999999999999999998 999999999998888732


Q ss_pred             CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       406 ~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .|.+.|++++|+|+|++|+++ +.|+.|++|+...+.
T Consensus       238 ~h~~~v~~~~~s~~~~~l~s~-s~d~~v~iw~~~~~~  273 (355)
T 3vu4_A          238 LDRADVVDMKWSTDGSKLAVV-SDKWTLHVFEIFNDQ  273 (355)
T ss_dssp             TCCSCEEEEEECTTSCEEEEE-ETTCEEEEEESSCCS
T ss_pred             CCCCcEEEEEECCCCCEEEEE-ECCCEEEEEEccCCC
Confidence            377899999999999999998 899999999986543

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=4.8e-30  Score=225.52  Aligned_cols=275  Identities=13%  Similarity=0.149  Sum_probs=183.6

Q ss_pred             eEEEEEcCCCC---EEEEEeCCCeEEEEEcCCC---ceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCC-cEEE
Q psy17902        145 ITCIAVTSDSK---HVYSACKDGIIIKWLLETR---SKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNS-NIKL  216 (454)
Q Consensus       145 V~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg-~v~v  216 (454)
                      +.++.|-..+-   .+++++. ..|++|+..+.   +...+..      .|..+|..+.+.|+.. ++.++-.+= .-.+
T Consensus        42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v  114 (356)
T 2w18_A           42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWH------FAEVPVLQIVPVPDVYNLVCVALGNLEIREI  114 (356)
T ss_dssp             EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEE------CCSSCEEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred             EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEe------ccCceeEEEEEcCcccceeeeeeccccccce
Confidence            45555644333   6777776 68999999987   5555555      3666788888877543 222221111 1111


Q ss_pred             EeC----C---CccEEeecccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeC-CCceeEEEeeccCCceeEEEeec---
Q psy17902        217 WSS----S---LEHLHTFTGHKAPITGLAISFECDTLYSSS--NDRSIKVWNI-EDRAYVETLFGHQSAITSLDILA---  283 (454)
Q Consensus       217 w~~----~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~---  283 (454)
                      +.+    +   ........+|...|.++   ++++++.+++  .|+.|++|++ .+++.+..+.+|...++.++|++   
T Consensus       115 ~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g  191 (356)
T 2w18_A          115 RALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG  191 (356)
T ss_dssp             EEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred             EEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence            211    1   01111223344444443   4565555543  5999999999 55888888889999999999999   


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEE-EEccccC---CeEEEE-ecCCCEE------------EEEeCCCCEEEEecCCCc
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR---GIDMTR-RVNDQQF------------ITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~---~i~~~~-~~~~~~l------------~~~~~dg~i~iwd~~~~~  346 (454)
                      ++.+|++++.|++|+|||+.+++.+ .+.+|..   .+.++. .+++.++            ++|+.|++|++||..+++
T Consensus       192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk  271 (356)
T 2w18_A          192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL  271 (356)
T ss_dssp             STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred             CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence            7799999999999999999999877 5544432   343333 4444444            567889999999999998


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceee-eEEEEcCCCCEEEE
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI-NSLVFTSDHKHLVA  425 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~l~~s~d~~~l~~  425 (454)
                      .+..+....    ..+|...+.+..+  ++.++|+|+.||+|+|||+.+++.+..+..  |...+ .+++|||||++|++
T Consensus       272 ~l~v~~~~~----p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaS  343 (356)
T 2w18_A          272 SVGVMLYCL----PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLA  343 (356)
T ss_dssp             EEEEEEECC----CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECC--C--CCCCEEEECSSSSEEEE
T ss_pred             EEEEEEeec----cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecC--CCCCeEEEEEECCCCCEEEE
Confidence            876653221    0112323433333  488999999999999999999999999876  65554 46899999999999


Q ss_pred             EecCCCceeeeee
Q psy17902        426 GIGTEHRFGRWKT  438 (454)
Q Consensus       426 ~~~~d~~i~~W~~  438 (454)
                      | +.|++|++|+.
T Consensus       344 G-S~D~TIklWd~  355 (356)
T 2w18_A          344 G-QKDGNIFVYHY  355 (356)
T ss_dssp             E-CTTSCEEEEEE
T ss_pred             E-ECCCcEEEecC
Confidence            9 89999999985

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.8e-30  Score=241.65  Aligned_cols=231  Identities=11%  Similarity=0.017  Sum_probs=181.9

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEE------------------------------EEeCCCccEEeecccCCCeEEEE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIK------------------------------LWSSSLEHLHTFTGHKAPITGLA  238 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~------------------------------vw~~~~~~~~~~~~~~~~v~~~~  238 (454)
                      ....|.+++|+|||+++|+++.|++|+                              +|+..+..+..+ .|...|.+++
T Consensus        14 ~~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~-~~~~~V~~va   92 (588)
T 2j04_A           14 FEDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS-QPVCYPRVCK   92 (588)
T ss_dssp             CSSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT-SCSCCEEEEE
T ss_pred             hhccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec-CCCCcEEEEE
Confidence            345788888888888888888888873                              121121122222 4578899999


Q ss_pred             EcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-----ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE------
Q psy17902        239 ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-----AITSLDILAKNRVISSGGTDKSVRVWKIQEESQ------  307 (454)
Q Consensus       239 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------  307 (454)
                      |+|+|.+|++++.||.|++||...  ++..+. |..     .|.+++|+|+|++|++|+.||+|++||+.++..      
T Consensus        93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i  169 (588)
T 2j04_A           93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY  169 (588)
T ss_dssp             ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred             ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence            999999999999999999999654  566666 665     499999999999999999999999999998752      


Q ss_pred             -E-EE----ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc---eeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        308 -L-VF----NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT---HTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       308 -~-~~----~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                       + .+    .+|...|.++.|+++. +++++.|++|++||+..+...   .++...        |...|.+++|+  |.+
T Consensus       170 ~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~--------h~~~V~svaFs--g~~  238 (588)
T 2j04_A          170 FESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNA--------SRRKITDLKIV--DYK  238 (588)
T ss_dssp             EEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECC--------CSSCCCCEEEE--TTE
T ss_pred             eeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeeccc--------ccCcEEEEEEE--CCE
Confidence             2 43    6677899999888877 999999999999999887642   333222        33449999999  689


Q ss_pred             EEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE--cCCCCEEEEEecCCCceeeeeee
Q psy17902        379 VASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF--TSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       379 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~--s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ||+++ +++|++||+.++.......+  |.+.|.+++|  +||+..|+++ +.+|. ++|...
T Consensus       239 LASa~-~~tIkLWd~~~~~~~~~~~g--h~~~V~~va~~~s~d~~~La~a-~edG~-klw~~d  296 (588)
T 2j04_A          239 VVLTC-PGYVHKIDLKNYSISSLKTG--SLENFHIIPLNHEKESTILLMS-NKTSY-KVLLED  296 (588)
T ss_dssp             EEEEC-SSEEEEEETTTTEEEEEECS--CCSCCCEEEETTCSSCEEEEEC-SSCEE-EEEESS
T ss_pred             EEEEe-CCeEEEEECCCCeEEEEEcC--CCceEEEEEeeeCCCCCEEEEE-cCCCC-EEEeec
Confidence            99887 69999999998766333333  8899999999  9999888888 78899 888764

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.8e-30  Score=236.64  Aligned_cols=232  Identities=9%  Similarity=0.032  Sum_probs=181.5

Q ss_pred             EeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CceeEE
Q psy17902        198 VANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---------DRAYVE  267 (454)
Q Consensus       198 ~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~~~~~  267 (454)
                      +.+++.+|++|+.||.|++||+ ++..+..+.  ...|.++.|+|+   +++++.|++|++|+..         ++..+.
T Consensus        44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~  118 (343)
T 3lrv_A           44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR  118 (343)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred             hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence            4457889999999999999999 666666665  567888889887   9999999999999765         444444


Q ss_pred             Eee-ccCCceeEEEeec--CCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEec-CCCEEEEEeCCCCEEEEe
Q psy17902        268 TLF-GHQSAITSLDILA--KNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       268 ~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd  341 (454)
                      .+. +|...|.+++|+|  ++++|++++.||.|++||++++.....  ..+...+.++.+. ++.+|++|+.||.|++||
T Consensus       119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd  198 (343)
T 3lrv_A          119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN  198 (343)
T ss_dssp             EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred             EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            443 6778999999999  999999999999999999999888633  2344467666655 567888999999999999


Q ss_pred             cCCCccc-eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-Cceeee--EEEEc
Q psy17902        342 ILKKVPT-HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-LSGVIN--SLVFT  417 (454)
Q Consensus       342 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~--~l~~s  417 (454)
                      ++++..+ ..+..        .|...|++++|+|++.+|++++ ++.|++||+.++..+..+.... +...+.  +++|+
T Consensus       199 ~~~~~~~~~~~~~--------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T 3lrv_A          199 LSSPDQASSRFPV--------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID  269 (343)
T ss_dssp             SSCTTSCCEECCC--------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred             CCCCCCCccEEec--------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence            9998876 55543        1455699999999999999999 5599999999887665544311 223343  69999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      |+|++|+++++.|+.|++|+.....+
T Consensus       270 ~~g~~l~~~s~~d~~i~v~~~~~~~~  295 (343)
T 3lrv_A          270 DSGKNMIAYSNESNSLTIYKFDKKTK  295 (343)
T ss_dssp             TTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred             CCCCEEEEecCCCCcEEEEEEccccc
Confidence            99999999955599999998865543

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=7.6e-29  Score=234.69  Aligned_cols=281  Identities=10%  Similarity=0.041  Sum_probs=217.2

Q ss_pred             CCCCeEEEE---EcCCCCEEEEEeC--------------CCeEEEEEcCC--C--ceecccCCcccCCCCCCceEEEEEe
Q psy17902        141 HRASITCIA---VTSDSKHVYSACK--------------DGIIIKWLLET--R--SKVCSSPFVKTDRKSYPPILALAVA  199 (454)
Q Consensus       141 h~~~V~~~~---~s~~~~~l~~~~~--------------dg~i~iwd~~~--~--~~~~~~~~~~~~~~~~~~v~~~~~~  199 (454)
                      ....+..++   |+|+++.+++.+.              ++.+.||.++.  +  .....+.       ....+.+++|+
T Consensus        59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~~~~~s  131 (433)
T 3bws_A           59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFK-------TGFQPKSVRFI  131 (433)
T ss_dssp             TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEE-------CSSCBCCCEES
T ss_pred             cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEc-------CCCCceEEEEe
Confidence            445678888   8888776665432              23224444432  3  2222222       22356689999


Q ss_pred             CCCcEEEEecCCCcEEEEeC-CCccEE-----eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902        200 NNNELVASGDNNSNIKLWSS-SLEHLH-----TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~-~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  273 (454)
                      |++.++++++.++.|++||+ ++..+.     .+.+|...|.+++|++++.++++++.|+.|++||+.+++.+..+..|.
T Consensus       132 ~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~  211 (433)
T 3bws_A          132 DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG  211 (433)
T ss_dssp             SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred             CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence            98888888888999999999 455555     345788999999999999999999999999999999999998888899


Q ss_pred             CceeEEEeecCCCEEE-EeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEe--------CCCCEEEEecC
Q psy17902        274 SAITSLDILAKNRVIS-SGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCG--------EDGTLSLWSIL  343 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~--------~dg~i~iwd~~  343 (454)
                      ..+.+++|+|++++++ +++.++.|++||++++...........+..+.+. ++..+++++        .||.|++||+.
T Consensus       212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~  291 (433)
T 3bws_A          212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD  291 (433)
T ss_dssp             SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred             CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence            9999999999998875 5557999999999998887444444456655554 566888877        48899999999


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                      +++.+..+...          ..+.+++|+|+++ ++++++.++.|++||+.+++.+..+.   +...+.+++|+|+|++
T Consensus       292 ~~~~~~~~~~~----------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~  358 (433)
T 3bws_A          292 KEKLIDTIGPP----------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKY  358 (433)
T ss_dssp             TTEEEEEEEEE----------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSE
T ss_pred             CCcEEeeccCC----------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCE
Confidence            88777665322          2388999999997 55667899999999999888777665   5667899999999999


Q ss_pred             EEEEecC--------------CCceeeeeeeCC
Q psy17902        423 LVAGIGT--------------EHRFGRWKTIKG  441 (454)
Q Consensus       423 l~~~~~~--------------d~~i~~W~~~~~  441 (454)
                      |++++..              ||.|++|+..++
T Consensus       359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~  391 (433)
T 3bws_A          359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD  391 (433)
T ss_dssp             EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred             EEEEecCCCccccccccccccceEEEEEECCCC
Confidence            9888544              569999998654

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.97  E-value=1.3e-29  Score=222.80  Aligned_cols=248  Identities=14%  Similarity=0.091  Sum_probs=170.1

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCC-eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDG-IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD  209 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~  209 (454)
                      ...++.+  |..+|..+.+.||.. ++.++-.+= .-.++-+.-...-..+.......++...|..+   ++++++.+++
T Consensus        78 ~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~  152 (356)
T 2w18_A           78 KLYTWHF--AEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSG  152 (356)
T ss_dssp             EEEEEEC--CSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEES
T ss_pred             eeEEEec--cCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecc
Confidence            6777888  998899888888643 222222110 00111111000000000000000122233332   4666666643


Q ss_pred             --CCCcEEEEeC--CCccEEeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCceeEEEeeccC---CceeEE
Q psy17902        210 --NNSNIKLWSS--SLEHLHTFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ---SAITSL  279 (454)
Q Consensus       210 --~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~  279 (454)
                        .|+.|++|++  +++.+..+..|...++.++|++   ++.+|++|+.|++|+|||+.+++++.++.+|.   ..+.++
T Consensus       153 ~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~v  232 (356)
T 2w18_A          153 TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHK  232 (356)
T ss_dssp             SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEE
T ss_pred             cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEE
Confidence              5899999998  4677788889999999999999   77999999999999999999999999998654   357778


Q ss_pred             EeecCCCEE------------EEeeCCCcEEEeeccCCeEEEE------ccccCCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902        280 DILAKNRVI------------SSGGTDKSVRVWKIQEESQLVF------NGHSRGIDMTRRVNDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       280 ~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~------~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd  341 (454)
                      +|+|++.++            ++|+.|++|++||..+++.+..      .+|...+....+ .+..+++++.|++|+|||
T Consensus       233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~-sg~~lASgS~DgTIkIWD  311 (356)
T 2w18_A          233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV-KDHCAAAILTSGTIAIWD  311 (356)
T ss_dssp             EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred             EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc-CCCEEEEEcCCCcEEEEE
Confidence            999999876            5678899999999999887632      244433322222 266889999999999999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      +.+++++.++..+..        ..+.+++|+|+|++|++|+.|++|+|||+
T Consensus       312 l~tGk~l~tL~gH~~--------~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          312 LLLGQCTALLPPVSD--------QHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TTTCSEEEEECCC----------CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCCCcEEEEecCCCC--------CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            999999998864321        12456899999999999999999999996

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.96  E-value=4.1e-27  Score=227.39  Aligned_cols=281  Identities=9%  Similarity=0.036  Sum_probs=216.7

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCceecccCCcccCCCCCCceEEEEEeC----CCcEEEEecC-CCcEEEE
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLL--ETRSKVCSSPFVKTDRKSYPPILALAVAN----NNELVASGDN-NSNIKLW  217 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~v~vw  217 (454)
                      +.+++|+|+|++|++++.|+.|.+||+  .+++.+..+.       +...+..++|+|    +|++|++++. +++|.||
T Consensus       181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~  253 (543)
T 1nir_A          181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM  253 (543)
T ss_dssp             EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred             cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence            899999999999999999999999999  7777665554       334689999999    9999999885 8999999


Q ss_pred             eC-CCccEEeecc----------cCC-CeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEE--EeeccCCceeEEEee
Q psy17902        218 SS-SLEHLHTFTG----------HKA-PITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVE--TLFGHQSAITSLDIL  282 (454)
Q Consensus       218 ~~-~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~  282 (454)
                      |. +.+.+..+..          |.. .+.++.++|++.. +++...++.|.+||+.+.+.+.  .+ .+...+.++.|+
T Consensus       254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~s  332 (543)
T 1nir_A          254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWD  332 (543)
T ss_dssp             ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEEC
T ss_pred             eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceEC
Confidence            99 6677766654          223 7889999997665 5566678999999998765443  33 466778899999


Q ss_pred             cCCCEEEEe-eCCCcEEEeeccCCeEE-EEcc----ccCCeEEEEecCCC-EEEEEe-CCCCEEEEecCC-------Ccc
Q psy17902        283 AKNRVISSG-GTDKSVRVWKIQEESQL-VFNG----HSRGIDMTRRVNDQ-QFITCG-EDGTLSLWSILK-------KVP  347 (454)
Q Consensus       283 ~~~~~l~~~-~~dg~i~i~d~~~~~~~-~~~~----~~~~i~~~~~~~~~-~l~~~~-~dg~i~iwd~~~-------~~~  347 (454)
                      |++++|+++ ..+++|.+||+.+++.. .+..    |......+..+++. .++++. .|++|.+||+.+       .+.
T Consensus       333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~  412 (543)
T 1nir_A          333 SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK  412 (543)
T ss_dssp             TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred             CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeE
Confidence            999977655 45889999999999877 3332    44333333455534 455554 589999999988       777


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-------CCCcEEEEEcCCCcee-eEecc------CCCceeeeE
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-------YDGCVKLWKITPKRTL-EFLQD------IPLSGVINS  413 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~v~iwd~~~~~~~-~~~~~------~~~~~~v~~  413 (454)
                      ++++....         ..+..++++|++++|++++       .+++|.+||+.+++.. ..+.-      ..+...+..
T Consensus       413 v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~  483 (543)
T 1nir_A          413 VAELQGQG---------GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ  483 (543)
T ss_dssp             EEEEECSC---------SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEE
T ss_pred             EEEEEcCC---------CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEe
Confidence            78777532         3367799999999999987       2679999999998766 44311      124678999


Q ss_pred             EEEcCCCCEEEEEec----CCCceeeeeeeCCC
Q psy17902        414 LVFTSDHKHLVAGIG----TEHRFGRWKTIKGV  442 (454)
Q Consensus       414 l~~s~d~~~l~~~~~----~d~~i~~W~~~~~~  442 (454)
                      +.|+|+|+.|+++..    .++.|.+||..++.
T Consensus       484 ~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~  516 (543)
T 1nir_A          484 PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  516 (543)
T ss_dssp             EEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred             ccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence            999999999998743    47999999987764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=7.2e-28  Score=225.88  Aligned_cols=280  Identities=8%  Similarity=-0.021  Sum_probs=210.7

Q ss_pred             CCCeEEEEEcCCCC-EEEEEe----CCC----eEEEEEc--CCCceecccCCcccCCCCCCceEEEEEeC----------
Q psy17902        142 RASITCIAVTSDSK-HVYSAC----KDG----IIIKWLL--ETRSKVCSSPFVKTDRKSYPPILALAVAN----------  200 (454)
Q Consensus       142 ~~~V~~~~~s~~~~-~l~~~~----~dg----~i~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----------  200 (454)
                      ...|....|++.+. ++++|+    .+|    .|++||+  .+++.+....+    .+|...+..+++++          
T Consensus        62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~~~~g  137 (415)
T 2hqs_A           62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSY----KVNKQWLRYAGHTASDEVFEKLTG  137 (415)
T ss_dssp             GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEE----EECGGGHHHHHHHHHHHHHHHHHS
T ss_pred             ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEE----EcChhHHHHHHHHHHHHHHHHHcC
Confidence            34677888888764 666776    467    9999999  88776532111    13444555555553          


Q ss_pred             ----CCcEEEEecCC------CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEE
Q psy17902        201 ----NNELVASGDNN------SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVE  267 (454)
Q Consensus       201 ----~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~  267 (454)
                          .+..++.++.+      +.|++||+.+.....+..|...+.+++|+|+|++|++++.++   .|++||+.+++.. 
T Consensus       138 ~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-  216 (415)
T 2hqs_A          138 IKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-  216 (415)
T ss_dssp             SCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred             CCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-
Confidence                14555555543      799999998777888889999999999999999999999875   9999999998765 


Q ss_pred             EeeccCCceeEEEeecCCCEEE-EeeCCCc--EEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeC-CC--CEEEE
Q psy17902        268 TLFGHQSAITSLDILAKNRVIS-SGGTDKS--VRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGE-DG--TLSLW  340 (454)
Q Consensus       268 ~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~-dg--~i~iw  340 (454)
                      .+..|...+.+++|+|+|+.|+ +++.++.  |++||+.++....+..+...+..+.|. ++..|++++. ++  .|.+|
T Consensus       217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~  296 (415)
T 2hqs_A          217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV  296 (415)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred             EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence            5667888999999999999777 6666654  999999998887777787777776665 5667887775 45  57777


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      |+.++... .+..         +...+.+++|+|+|++|++++.+   +.|++||+.++... .+..  + ..+.+++|+
T Consensus       297 d~~~~~~~-~l~~---------~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~--~-~~~~~~~~s  362 (415)
T 2hqs_A          297 NINGGAPQ-RITW---------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS--T-FLDETPSLA  362 (415)
T ss_dssp             ETTSSCCE-ECCC---------SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC--S-SSCEEEEEC
T ss_pred             ECCCCCEE-EEec---------CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecC--C-CCcCCeEEc
Confidence            88776532 2211         23458899999999999888764   58999999987663 3443  3 278999999


Q ss_pred             CCCCEEEEEecCCC--ceeeeeeeC
Q psy17902        418 SDHKHLVAGIGTEH--RFGRWKTIK  440 (454)
Q Consensus       418 ~d~~~l~~~~~~d~--~i~~W~~~~  440 (454)
                      |||++|++++..++  .|.+|+...
T Consensus       363 pdg~~l~~~s~~~~~~~l~~~d~~g  387 (415)
T 2hqs_A          363 PNGTMVIYSSSQGMGSVLNLVSTDG  387 (415)
T ss_dssp             TTSSEEEEEEEETTEEEEEEEETTS
T ss_pred             CCCCEEEEEEcCCCccEEEEEECCC
Confidence            99999998855454  788888653

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.96  E-value=4e-27  Score=238.22  Aligned_cols=290  Identities=10%  Similarity=0.005  Sum_probs=217.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-CC-----eEEEEEcCCCceecccCCcccCC------------------CCCCceEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-DG-----IIIKWLLETRSKVCSSPFVKTDR------------------KSYPPILAL  196 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~------------------~~~~~v~~~  196 (454)
                      ....|.+++|||||++|++++. ||     .|++||+.+++............                  .....|.++
T Consensus        35 ~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  114 (741)
T 2ecf_A           35 SGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY  114 (741)
T ss_dssp             TCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred             CCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence            3567999999999999999998 88     99999999887654443211000                  000237889


Q ss_pred             EEeCCCcEEEEecCCCcEEEEeCCCc---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902        197 AVANNNELVASGDNNSNIKLWSSSLE---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       197 ~~~~~~~~l~~~~~dg~v~vw~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  273 (454)
                      +|+|||++|++++. +.|.+||+.+.   .+..+..|...+.+++|+|||++|++++. +.|++||+.+++.......+.
T Consensus       115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~  192 (741)
T 2ecf_A          115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS  192 (741)
T ss_dssp             EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred             EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence            99999999999886 99999999655   67778888889999999999999999874 689999999887665544443


Q ss_pred             Cc----------------eeEEEeecCCCEEEEeeCCC---------------------------------cEEEeeccC
Q psy17902        274 SA----------------ITSLDILAKNRVISSGGTDK---------------------------------SVRVWKIQE  304 (454)
Q Consensus       274 ~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~i~d~~~  304 (454)
                      ..                +.++.|+|+|++|++++.|+                                 .|++||+.+
T Consensus       193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~  272 (741)
T 2ecf_A          193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE  272 (741)
T ss_dssp             SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred             cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence            32                47899999999999887765                                 789999988


Q ss_pred             -CeEEEEc---cccCCeEEEEecCCCEEEEEeC-----CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        305 -ESQLVFN---GHSRGIDMTRRVNDQQFITCGE-----DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       305 -~~~~~~~---~~~~~i~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                       +....+.   .+...+..+.|+++..|++++.     +..|++||+.++.....+......     ....+..++|+|+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~~~~~~~~~spd  347 (741)
T 2ecf_A          273 QAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT-----WVPLHNSLRFLDD  347 (741)
T ss_dssp             TCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS-----CCCCCSCCEECTT
T ss_pred             CCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC-----cCCcCCceEECCC
Confidence             7765433   3445555554577787876653     567999999988776655432211     0002457899999


Q ss_pred             CCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEE-EEcCCCCEEEEEecCCC--ceeeeeeeC
Q psy17902        376 SDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSL-VFTSDHKHLVAGIGTEH--RFGRWKTIK  440 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~~~~~~d~--~i~~W~~~~  440 (454)
                      |+++++++.||.++||.+. .+. ...+..  +...|.++ .|+|||+.|+++++.++  .+.+|....
T Consensus       348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~  413 (741)
T 2ecf_A          348 GSILWSSERTGFQHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL  413 (741)
T ss_dssp             SCEEEEECTTSSCEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred             CeEEEEecCCCccEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence            9999999999988888876 344 555654  56667777 59999999887756666  889998764

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.96  E-value=6.2e-27  Score=219.49  Aligned_cols=268  Identities=9%  Similarity=0.013  Sum_probs=205.3

Q ss_pred             ceeEeEeccCCCCCCeEEEEEcC--------------CCCEEEEEeCC------CeEEEEEcCCCceecccCCcccCCCC
Q psy17902        130 TVVCTKFNGKPHRASITCIAVTS--------------DSKHVYSACKD------GIIIKWLLETRSKVCSSPFVKTDRKS  189 (454)
Q Consensus       130 ~~~~~~~~~~~h~~~V~~~~~s~--------------~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~  189 (454)
                      ......|.+  |...+..+++++              .+..|+.++.+      +.|++||+.... ...+.      .|
T Consensus       107 ~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~------~~  177 (415)
T 2hqs_A          107 VLAQNSYKV--NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVH------RS  177 (415)
T ss_dssp             EEEEEEEEE--CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEE------EE
T ss_pred             EEeeeEEEc--ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEe------CC
Confidence            334466888  988888888775              15666666654      799999998543 22222      46


Q ss_pred             CCceEEEEEeCCCcEEEEecCCC---cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCc
Q psy17902        190 YPPILALAVANNNELVASGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRS--IKVWNIEDR  263 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg---~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~  263 (454)
                      ...+.+++|+|+|++|++++.++   .|++||+.......+..|...+.+++|+|+|+.|+ +++.++.  |++||+.++
T Consensus       178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~  257 (415)
T 2hqs_A          178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG  257 (415)
T ss_dssp             SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred             CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence            77899999999999999998875   99999995555567778889999999999999888 6666655  999999988


Q ss_pred             eeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCC---CC
Q psy17902        264 AYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGED---GT  336 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~d---g~  336 (454)
                      +. ..+..|...+.+++|+|++++|++++. ++  .|++||+.++....+..+...+..+.+ +++.+|++++.+   ..
T Consensus       258 ~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~  336 (415)
T 2hqs_A          258 QI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH  336 (415)
T ss_dssp             CE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred             CE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE
Confidence            75 566778889999999999998888776 44  678889988776655555555655554 567778777754   58


Q ss_pred             EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC---cEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902        337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG---CVKLWKITPKRTLEFLQDIPLSGVINS  413 (454)
Q Consensus       337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~  413 (454)
                      |.+||+.++... .+..         + ..+.+++|+|+|++|++++.++   .|++||+. +.....+..  +.+.|.+
T Consensus       337 i~~~d~~~~~~~-~l~~---------~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~--~~~~v~~  402 (415)
T 2hqs_A          337 IAKQDLATGGVQ-VLSS---------T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPA--TDGQVKF  402 (415)
T ss_dssp             EEEEETTTCCEE-ECCC---------S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCC--SSSEEEE
T ss_pred             EEEEECCCCCEE-EecC---------C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeC--CCCCCcC
Confidence            999999887653 2221         1 1389999999999999888877   79999987 455666665  7889999


Q ss_pred             EEEcCCCC
Q psy17902        414 LVFTSDHK  421 (454)
Q Consensus       414 l~~s~d~~  421 (454)
                      ++|+|.-.
T Consensus       403 ~~~~~~~~  410 (415)
T 2hqs_A          403 PAWSPYLH  410 (415)
T ss_dssp             EEECCCCC
T ss_pred             Cccccccc
Confidence            99999643

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.95  E-value=3.3e-26  Score=221.03  Aligned_cols=279  Identities=9%  Similarity=0.022  Sum_probs=215.8

Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---CCccEE
Q psy17902        149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---SLEHLH  225 (454)
Q Consensus       149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~~~~~~  225 (454)
                      +|+|++.++++++.+++|.+||..+++.+..+..     ++  .+..++|+|+|++|++++.++.|.+||+   ++..+.
T Consensus       144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-----g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~  216 (543)
T 1nir_A          144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-----GY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA  216 (543)
T ss_dssp             CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-----ST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred             ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec-----Cc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence            4889999999999999999999999988776653     23  3889999999999999999999999999   455566


Q ss_pred             eecccCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEeCCCceeEEEeecc----------C-CceeEEEeecCCC-EE
Q psy17902        226 TFTGHKAPITGLAISF----ECDTLYSSSN-DRSIKVWNIEDRAYVETLFGH----------Q-SAITSLDILAKNR-VI  288 (454)
Q Consensus       226 ~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~----------~-~~v~~~~~~~~~~-~l  288 (454)
                      .+. +...+..++|+|    +|++|++++. +++|.+||..+++++..+..+          . ..+.++.++|++. ++
T Consensus       217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~  295 (543)
T 1nir_A          217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI  295 (543)
T ss_dssp             EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred             EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence            666 455679999999    9999999884 899999999999988877642          2 3688999999765 56


Q ss_pred             EEeeCCCcEEEeeccCCeEEE--EccccCCeE-EEEecCCCEEEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQLV--FNGHSRGID-MTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~--~~~~~~~i~-~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      ++...++.|.+||+.+...+.  ...+...+. ..+.+++.+|++++ .+++|.+||+.+++.+..+.....     +|.
T Consensus       296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~-----ph~  370 (543)
T 1nir_A          296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT-----PHP  370 (543)
T ss_dssp             EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-----BCC
T ss_pred             EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC-----CCC
Confidence            677789999999998754331  222333333 44455677666555 689999999999998888764321     133


Q ss_pred             CcEEEEEEecC-CCEEEEec-CCCcEEEEEcCC-------CceeeEeccCCCceeeeEEEEcCCCCEEEEEe--c----C
Q psy17902        365 NWITSVACLHN-SDLVASGS-YDGCVKLWKITP-------KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI--G----T  429 (454)
Q Consensus       365 ~~i~~~~~s~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~--~----~  429 (454)
                      .....+ ++|+ +.+++++. .|++|.+|++.+       .+.+..+..  +.+.+..++|+|+|++|+++.  +    .
T Consensus       371 g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~~~~~~  447 (543)
T 1nir_A          371 GRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARI  447 (543)
T ss_dssp             TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred             CCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCCCCccc
Confidence            323333 5777 66777775 589999999988       788888886  667788999999999999983  1    2


Q ss_pred             CCceeeeeeeCCCe
Q psy17902        430 EHRFGRWKTIKGVK  443 (454)
Q Consensus       430 d~~i~~W~~~~~~~  443 (454)
                      ++.|.+|+..+...
T Consensus       448 ~~~v~v~d~~~~~~  461 (543)
T 1nir_A          448 SQSVAVFDLKNLDA  461 (543)
T ss_dssp             HTCEEEEETTCTTS
T ss_pred             CceEEEEECCCCCC
Confidence            67999999876654

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.95  E-value=4.3e-25  Score=202.86  Aligned_cols=268  Identities=10%  Similarity=0.036  Sum_probs=208.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg  212 (454)
                      ....+..++|+|++++|++++.       ++.|.+||..+++....+..       ...+..++|+|++++++ ++..++
T Consensus        39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~v~~~~~~  111 (353)
T 3vgz_A           39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-------DLKPFGATINNTTQTLWFGNTVNS  111 (353)
T ss_dssp             EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-------SSCCCSEEEETTTTEEEEEETTTT
T ss_pred             hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-------CCCcceEEECCCCCEEEEEecCCC
Confidence            4456889999999999988874       56899999999887766542       23467899999998555 455579


Q ss_pred             cEEEEeC-CCccEEeecccCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKAP---------ITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSAITSLD  280 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~  280 (454)
                      .|.+||. +++.+..+..+...         +.+++|+|+++++++++  .++.|.+||+.+++.+..+..+...+.+++
T Consensus       112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~  191 (353)
T 3vgz_A          112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA  191 (353)
T ss_dssp             EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred             EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence            9999999 56666666554322         78899999999888776  478899999999998888765666789999


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEEE-Ecc----ccCCeE-EEEecCCCEEEEEe-CCCCEEEEecCCCccceeeec
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQLV-FNG----HSRGID-MTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~----~~~~i~-~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |+|++++|++++.++.|.+||+.+++... +..    +...+. ..+.++++++++++ .++.|.+||+.+++.+..+..
T Consensus       192 ~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~  271 (353)
T 3vgz_A          192 LDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA  271 (353)
T ss_dssp             EETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred             ECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence            99999999999999999999999988772 222    233344 34455677666655 459999999999988877764


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      ..           ...++|+|++++++++ ..++.|.+||+.+++.+..+..   ...+.+++|+|||++|+++...
T Consensus       272 ~~-----------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          272 PE-----------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQ  334 (353)
T ss_dssp             SS-----------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEEC
T ss_pred             CC-----------CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEcc
Confidence            32           2458999999965554 4689999999999988877763   4468999999999988887433

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.95  E-value=1.2e-25  Score=204.67  Aligned_cols=275  Identities=7%  Similarity=0.017  Sum_probs=196.1

Q ss_pred             EEcCCCCE-EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEeC-CCcc-E
Q psy17902        149 AVTSDSKH-VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWSS-SLEH-L  224 (454)
Q Consensus       149 ~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~-~~~~-~  224 (454)
                      .|.+++++ +++++.++.|.+||+.+++....+..      +...+ +++|+|++++|++++. ++.|.+||+ ++.. .
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~   76 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV   76 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence            45665555 66777889999999999887666542      34456 9999999997666655 889999999 5555 6


Q ss_pred             EeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCc-EEE
Q psy17902        225 HTFTGHKAPITGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKS-VRV  299 (454)
Q Consensus       225 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~i  299 (454)
                      ..+..+..+..+++|+|++++|+++..++   .|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ..++. |.+
T Consensus        77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~  155 (331)
T 3u4y_A           77 VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR  155 (331)
T ss_dssp             EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred             EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEE
Confidence            66666666666699999999999655553   899999999998877754 4456899999999855544 55588 999


Q ss_pred             eeccCCeEE-----EEccccCCeEEEE-ecCCCEEEEE-eCCCCEEEEecCCCcc---ceeeecccCCCCCCCCCCcEEE
Q psy17902        300 WKIQEESQL-----VFNGHSRGIDMTR-RVNDQQFITC-GEDGTLSLWSILKKVP---THTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       300 ~d~~~~~~~-----~~~~~~~~i~~~~-~~~~~~l~~~-~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      |++.....+     ...........+. .+++.+++++ ..++.|.+||+.+++.   +..+...          ..+..
T Consensus       156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~----------~~~~~  225 (331)
T 3u4y_A          156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN----------NLPGT  225 (331)
T ss_dssp             EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS----------SCCCC
T ss_pred             EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC----------CCCce
Confidence            998754332     1112222334444 4556655554 4689999999998887   6555532          22678


Q ss_pred             EEEecCCCEEEEec-CCCcEEEEEcCCCce--eeEeccC--CCcee---eeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        370 VACLHNSDLVASGS-YDGCVKLWKITPKRT--LEFLQDI--PLSGV---INSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       370 ~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~--~~~~~~~--~~~~~---v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ++|+|+|++|++++ .++.|.+||+.+++.  +..+...  ....+   +..++|+|||++|++++..++.|.+|+....
T Consensus       226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~  305 (331)
T 3u4y_A          226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK  305 (331)
T ss_dssp             EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred             EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence            99999999766554 578899999998865  3333221  01122   3568999999999888778889999997653

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.95  E-value=4.8e-25  Score=201.62  Aligned_cols=273  Identities=11%  Similarity=0.148  Sum_probs=187.0

Q ss_pred             CEEEEE-eCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-CcEEEEeCC--Ccc---EEe
Q psy17902        155 KHVYSA-CKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-SNIKLWSSS--LEH---LHT  226 (454)
Q Consensus       155 ~~l~~~-~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~v~vw~~~--~~~---~~~  226 (454)
                      ++++++ +.++.|++|++.. +........     .+...+.+++|+|++++|++++.+ +.|.+|++.  ...   +..
T Consensus         5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~   79 (343)
T 1ri6_A            5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-----DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE   79 (343)
T ss_dssp             EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-----ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred             EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-----ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence            344444 7799999999963 221111111     245578899999999988888876 999999984  333   233


Q ss_pred             ecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeC---CCceeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEee
Q psy17902        227 FTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNI---EDRAYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWK  301 (454)
Q Consensus       227 ~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d  301 (454)
                      +..+. .+.+++|+|++++|++++. ++.|.+||+   .....+..+.. ...+.+++|+|++++|++++ .++.|.+||
T Consensus        80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d  157 (343)
T 1ri6_A           80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFT  157 (343)
T ss_dssp             EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence            44333 7889999999998877765 888999999   44444444443 34588999999999888777 899999999


Q ss_pred             ccC-CeEEE-----Ecc-ccCCeEEEEe-cCCCEEEEEe-CCCCEEEEecCC--Ccc--ceeeecccCCCCCCCCCCcEE
Q psy17902        302 IQE-ESQLV-----FNG-HSRGIDMTRR-VNDQQFITCG-EDGTLSLWSILK--KVP--THTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       302 ~~~-~~~~~-----~~~-~~~~i~~~~~-~~~~~l~~~~-~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +.+ +....     ... ....+..+.+ +++.++++++ .++.|.+|++..  +..  ...+..   ..........+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~  234 (343)
T 1ri6_A          158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM---MPENFSDTRWAA  234 (343)
T ss_dssp             ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC---SCTTCCSCCCEE
T ss_pred             ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc---cCccccccCCcc
Confidence            987 54431     121 2224444444 4566665554 889999999954  322  112211   100001234578


Q ss_pred             EEEEecCCCEEE-EecCCCcEEEEEcCC--C--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        369 SVACLHNSDLVA-SGSYDGCVKLWKITP--K--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       369 ~~~~s~~~~~l~-~~~~dg~v~iwd~~~--~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      .++|+|+|++|+ ++..++.|.+|++..  +  +.+..+.   ....+.+++|+|+|++|+++...++.|.+|+...
T Consensus       235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~  308 (343)
T 1ri6_A          235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP---TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  308 (343)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE---CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec---CCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence            999999998776 555789999999983  2  3333333   2334889999999999999966899999997764

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.94  E-value=7.9e-25  Score=199.64  Aligned_cols=264  Identities=10%  Similarity=0.020  Sum_probs=197.3

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC-ceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecc-c
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP-PILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTG-H  230 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~-~  230 (454)
                      ++|++++.++.|.+||+.+++....+..     ++.. .+..++|+|+++++ +++..++.|.+||+ ++..+..+.. +
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~   76 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVITI-----ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST   76 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEEC-----TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEEc-----CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence            5789999999999999998877665542     1211 37789999999765 55566789999999 5555555542 2


Q ss_pred             ----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902        231 ----KAPITGLAISFECDTLYSSS------------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       231 ----~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                          ...+.+++|+|++++|++++            .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++  +
T Consensus        77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~  153 (337)
T 1pby_B           77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--G  153 (337)
T ss_dssp             TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred             cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence                22677899999999999886            579999999999888777654 4567889999999988877  6


Q ss_pred             CcEEEeeccCCeEE-EEcccc--CCeEEEEecCCCEEEEEeCC-C-----------------------CEEEEecCCCcc
Q psy17902        295 KSVRVWKIQEESQL-VFNGHS--RGIDMTRRVNDQQFITCGED-G-----------------------TLSLWSILKKVP  347 (454)
Q Consensus       295 g~i~i~d~~~~~~~-~~~~~~--~~i~~~~~~~~~~l~~~~~d-g-----------------------~i~iwd~~~~~~  347 (454)
                      +.|++||+.+++.. .+..+.  ..+  .+.+++..++..+.. +                       .|.+||+.+++.
T Consensus       154 ~~i~~~d~~~~~~~~~~~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~  231 (337)
T 1pby_B          154 RDLHVMDPEAGTLVEDKPIQSWEAET--YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM  231 (337)
T ss_dssp             SSEEEEETTTTEEEEEECSTTTTTTT--BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred             CeEEEEECCCCcEeeeeeccccCCCc--eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence            89999999998776 333222  222  233444444333322 2                       478999988876


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      . .+....       +...+.+++|+|+|++|+++  ++.|.+||+.+++.+..+..   ...+.+++|+|+|++|+++ 
T Consensus       232 ~-~~~~~~-------~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~-  297 (337)
T 1pby_B          232 A-MREVRI-------MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLG-  297 (337)
T ss_dssp             E-EEEEEE-------CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEE-
T ss_pred             e-EeecCC-------CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC---CCceeeEEECCCCCEEEEE-
Confidence            5 333221       22348899999999999888  68999999999887776653   3467899999999999998 


Q ss_pred             cCCCceeeeeeeCCC
Q psy17902        428 GTEHRFGRWKTIKGV  442 (454)
Q Consensus       428 ~~d~~i~~W~~~~~~  442 (454)
                      +.++.|.+|+..++.
T Consensus       298 ~~~~~i~v~d~~~~~  312 (337)
T 1pby_B          298 GALGDLAAYDAETLE  312 (337)
T ss_dssp             SBSSEEEEEETTTCC
T ss_pred             cCCCcEEEEECcCCc
Confidence            779999999987654

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.94  E-value=1.4e-24  Score=218.40  Aligned_cols=278  Identities=10%  Similarity=0.004  Sum_probs=199.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S  220 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~  220 (454)
                      ...|.+++|||+ ..++.+. ++.|++||+.++.......       +...+.+++|+|+|++|+++ .++.|++|++ .
T Consensus        81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~-------~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~  150 (706)
T 2z3z_A           81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFD-------TNEETASLDFSPVGDRVAYV-RNHNLYIARGGK  150 (706)
T ss_dssp             -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEEC-------CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred             ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccC-------CcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence            357999999999 6666654 5999999998876543322       34568889999999999986 5799999999 4


Q ss_pred             -----CccEEeecccCCC--------------eEEEEEcCCCCEEEEEe-------------------------------
Q psy17902        221 -----LEHLHTFTGHKAP--------------ITGLAISFECDTLYSSS-------------------------------  250 (454)
Q Consensus       221 -----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~-------------------------------  250 (454)
                           +........+...              +.+++|+|||++|++++                               
T Consensus       151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~  230 (706)
T 2z3z_A          151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT  230 (706)
T ss_dssp             TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred             ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence                 4554444444333              48899999999999987                               


Q ss_pred             --CCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCC-eEEEEc--cccCC--
Q psy17902        251 --NDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEE-SQLVFN--GHSRG--  316 (454)
Q Consensus       251 --~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~-~~~~~~--~~~~~--  316 (454)
                        .+..|++||+.+++......  .|...+.+++|+|+|++|++++.++     .|++||+.++ ....+.  .+...  
T Consensus       231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~  310 (706)
T 2z3z_A          231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE  310 (706)
T ss_dssp             CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred             CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence              45789999999887654432  4667899999999999999887775     8999999988 443322  12211  


Q ss_pred             -eE-EEEec--CCCEEEEEeCCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEEE-EEEecCCCEEEEec-CCC---
Q psy17902        317 -ID-MTRRV--NDQQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITS-VACLHNSDLVASGS-YDG---  386 (454)
Q Consensus       317 -i~-~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-~dg---  386 (454)
                       +. ..+.+  ++.++++++.+|.++||.+. .+..+..+..         +...+.. ++|+|+|+.|+.++ .++   
T Consensus       311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~---------~~~~v~~~~~~spdg~~l~~~~~~~~~~~  381 (706)
T 2z3z_A          311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK---------GEWEVTNFAGFDPKGTRLYFESTEASPLE  381 (706)
T ss_dssp             CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC---------SSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred             ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC---------CCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence             12 34455  66677788889999999886 4444444432         2233666 89999998776554 444   


Q ss_pred             -cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC---CceeeeeeeCCC
Q psy17902        387 -CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE---HRFGRWKTIKGV  442 (454)
Q Consensus       387 -~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d---~~i~~W~~~~~~  442 (454)
                       .|..|++.++. ...+.   +...+.+++|||||++|+++++.+   +.|.+|+...+.
T Consensus       382 ~~l~~~d~~~~~-~~~l~---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~  437 (706)
T 2z3z_A          382 RHFYCIDIKGGK-TKDLT---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS  437 (706)
T ss_dssp             BEEEEEETTCCC-CEESC---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred             EEEEEEEcCCCC-ceecc---CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence             56667776654 33343   456688999999999998875544   569999876553

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.94  E-value=3e-25  Score=198.32  Aligned_cols=254  Identities=11%  Similarity=-0.000  Sum_probs=186.2

Q ss_pred             EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C-CccEEeeccc-CCCeE
Q psy17902        159 SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S-LEHLHTFTGH-KAPIT  235 (454)
Q Consensus       159 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~-~~~~~~~~~~-~~~v~  235 (454)
                      .++.++.|++||+.++......       .|...|.+++|+|++++|++++ ++.|.+||+ . +........+ ...+.
T Consensus        17 ~~~~~~~i~~~d~~~~~~~~~~-------~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~   88 (297)
T 2ojh_A           17 GGSMRSSIEIFNIRTRKMRVVW-------QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN   88 (297)
T ss_dssp             -CCCCEEEEEEETTTTEEEEEE-------EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred             CCCcceeEEEEeCCCCceeeec-------cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence            3457899999999987765332       3667899999999999999987 789999999 4 4555555455 46789


Q ss_pred             EEEEcCCCCEEEEEeC--CC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE-EeeCCCcEEEeecc--CCeEE
Q psy17902        236 GLAISFECDTLYSSSN--DR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS-SGGTDKSVRVWKIQ--EESQL  308 (454)
Q Consensus       236 ~~~~~~~~~~l~~~~~--dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~--~~~~~  308 (454)
                      +++|+|++++|++++.  ++  .|.+|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+|++.  ++...
T Consensus        89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~  166 (297)
T 2ojh_A           89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET  166 (297)
T ss_dssp             CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred             ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence            9999999999999983  34  45555555554 3344333 3589999999999776 77889999999864  45555


Q ss_pred             EEccccCCeEEEEec-CCCEEEEEe-CCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        309 VFNGHSRGIDMTRRV-NDQQFITCG-EDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       309 ~~~~~~~~i~~~~~~-~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .+..+...+..+.+. ++..+++++ .++.+.+|++. .+.....+..         +...+.+++|+|+|++|++++.+
T Consensus       167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~~~~~~  237 (297)
T 2ojh_A          167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD---------SAYGDWFPHPSPSGDKVVFVSYD  237 (297)
T ss_dssp             ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC---------CSEEEEEEEECTTSSEEEEEEEE
T ss_pred             EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec---------CCcccCCeEECCCCCEEEEEEcC
Confidence            666677777776665 566666665 58999999986 3444433322         23458999999999999888766


Q ss_pred             -----------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        386 -----------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       386 -----------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                                 +.|.+||+.+++.........+...+.+++|+|+|++|++++.+++
T Consensus       238 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~  294 (297)
T 2ojh_A          238 ADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV  294 (297)
T ss_dssp             TTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred             CCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence                       5699999988765433332226678999999999999998855543

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=5.9e-25  Score=221.71  Aligned_cols=280  Identities=10%  Similarity=0.040  Sum_probs=197.8

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC---ceEEEEEeCCCcEEEEecCC--------
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP---PILALAVANNNELVASGDNN--------  211 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d--------  211 (454)
                      ..+.+++|+|+|+++++ +.||.|++||+.+++....+.      .+..   .|.+++|+|||++|++++.+        
T Consensus        17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~------~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~   89 (723)
T 1xfd_A           17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE------GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY   89 (723)
T ss_dssp             CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC------TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred             ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEec------cccccccccceEEECCCCCEEEEEecCccceeecc
Confidence            34678899999998876 789999999999887655443      2322   48999999999999998764        


Q ss_pred             -CcEEEEeCCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----------
Q psy17902        212 -SNIKLWSSSLEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI-----------  276 (454)
Q Consensus       212 -g~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----------  276 (454)
                       +.|.+||+.+.....+.   .|...+..++|+|||+.|+.++. +.|++||+.+++.......+...+           
T Consensus        90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~  168 (723)
T 1xfd_A           90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE  168 (723)
T ss_dssp             CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred             eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence             78889999544334443   34455889999999999999886 789999999887766554444333           


Q ss_pred             -------eEEEeecCCCEEEEeeCCC----------------------------------cEEEeeccCCeE-EEEccc-
Q psy17902        277 -------TSLDILAKNRVISSGGTDK----------------------------------SVRVWKIQEESQ-LVFNGH-  313 (454)
Q Consensus       277 -------~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~-~~~~~~-  313 (454)
                             .+++|+|+|+.|++++.++                                  .|++||+.++.. ..+..+ 
T Consensus       169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~  248 (723)
T 1xfd_A          169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD  248 (723)
T ss_dssp             HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred             EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence                   7899999999999887553                                  799999988774 344332 


Q ss_pred             -----cCCeEEEEecC-CCEEEEEeC----CCCEEEEecCCCccceeeecccCCCCCCCCCCcE----EEEEEecCCCEE
Q psy17902        314 -----SRGIDMTRRVN-DQQFITCGE----DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI----TSVACLHNSDLV  379 (454)
Q Consensus       314 -----~~~i~~~~~~~-~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~~~~l  379 (454)
                           ...+..+.+++ +..+++.+.    +..|++||+.+++....+...+.        .++    ..++|+|+|+.|
T Consensus       249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l  320 (723)
T 1xfd_A          249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE--------AWLHRQNEEPVFSKDGRKF  320 (723)
T ss_dssp             CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS--------SCCCCCCCCCEECTTSCSE
T ss_pred             cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC--------CEEeccCCCceEcCCCCeE
Confidence                 34455565555 445545543    35799999998876655433221        112    368999999966


Q ss_pred             EE--ecCCC------cEEEEEc-CCCce--eeEeccCCCceeee-EEEEcCCCCEEEEEecCC--CceeeeeeeC
Q psy17902        380 AS--GSYDG------CVKLWKI-TPKRT--LEFLQDIPLSGVIN-SLVFTSDHKHLVAGIGTE--HRFGRWKTIK  440 (454)
Q Consensus       380 ~~--~~~dg------~v~iwd~-~~~~~--~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~~d--~~i~~W~~~~  440 (454)
                      +.  +..++      .|.+||+ ..+..  ...+..  ....+. .++|+|||+.|+.++..+  +.+.+|....
T Consensus       321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~  393 (723)
T 1xfd_A          321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT  393 (723)
T ss_dssp             EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred             EEEEecccCCCcceeEEEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence            64  45666      4666773 33331  444442  223344 479999999998775555  7889998754

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.93  E-value=1.8e-23  Score=211.54  Aligned_cols=273  Identities=9%  Similarity=0.028  Sum_probs=197.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      .|.+++|||||++|++++. +.|.+||+.++.  ....+.      .+...+.+++|+|||++|++++ ++.|++|++.+
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~------~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~  181 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT------HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS  181 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC------CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc------cCCcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence            3889999999999999987 999999999872  222222      3566899999999999999987 46999999954


Q ss_pred             ccEEee-cccCCC----------------eEEEEEcCCCCEEEEEeCCC-------------------------------
Q psy17902        222 EHLHTF-TGHKAP----------------ITGLAISFECDTLYSSSNDR-------------------------------  253 (454)
Q Consensus       222 ~~~~~~-~~~~~~----------------v~~~~~~~~~~~l~~~~~dg-------------------------------  253 (454)
                      .....+ ..+...                +.+++|+|||++|++++.|+                               
T Consensus       182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~  261 (741)
T 2ecf_A          182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV  261 (741)
T ss_dssp             TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred             CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence            444333 333332                47899999999999988765                               


Q ss_pred             --cEEEEeCCC-ceeEEEee--ccCCceeEEEeecCCCEEEEeeC-----CCcEEEeeccCCeEEE-EccccC----Ce-
Q psy17902        254 --SIKVWNIED-RAYVETLF--GHQSAITSLDILAKNRVISSGGT-----DKSVRVWKIQEESQLV-FNGHSR----GI-  317 (454)
Q Consensus       254 --~i~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~-~~~~~~----~i-  317 (454)
                        .|++||+.+ ++......  .|...+.+++| |+|++|++++.     +..|++||+.++.... +..+..    .+ 
T Consensus       262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~  340 (741)
T 2ecf_A          262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN  340 (741)
T ss_dssp             EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred             eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence              789999988 77654432  47788999999 99999887654     5689999999987763 333332    12 


Q ss_pred             EEEEecCCCEEEEEeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEE-EEecCCCEEE-EecCCC--cEEEEE
Q psy17902        318 DMTRRVNDQQFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVA-SGSYDG--CVKLWK  392 (454)
Q Consensus       318 ~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~~~~dg--~v~iwd  392 (454)
                      ...+.+++.++++++.+|.++||.+.. +. ...+..         +...+..+ .|+|+|+.|+ +++.++  .++||+
T Consensus       341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~---------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~  410 (741)
T 2ecf_A          341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH---------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYA  410 (741)
T ss_dssp             CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC---------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred             ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee---------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence            344455677778888899888887752 33 333321         23337777 5999998765 455555  899999


Q ss_pred             cCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC---Cceeeeee
Q psy17902        393 ITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE---HRFGRWKT  438 (454)
Q Consensus       393 ~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d---~~i~~W~~  438 (454)
                      +.. +.....+..   ...+.+++|||||++|++.++..   ..+.+|+.
T Consensus       411 ~~~~g~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~  457 (741)
T 2ecf_A          411 VPLQGGQPQRLSK---APGMHSASFARNASVYVDSWSNNSTPPQIELFRA  457 (741)
T ss_dssp             EETTCCCCEECCC---SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred             EEcCCCCeeeccc---CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence            874 454555553   45578999999999998875543   34666654

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.93  E-value=8.2e-24  Score=221.20  Aligned_cols=279  Identities=8%  Similarity=0.019  Sum_probs=217.3

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ...+.+  |...+.++.|+++ .++++++.+|.+.||.+.. +.....+.      .+. .+..++|+|+|++|+++. +
T Consensus       196 ~~~l~~--~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~------~~~-~~~~~~~SpDG~~la~~~-~  264 (1045)
T 1k32_A          196 FKKIVD--MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT------SFT-DYYPRHLNTDGRRILFSK-G  264 (1045)
T ss_dssp             EEEEEC--CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC------CCC-SSCEEEEEESSSCEEEEE-T
T ss_pred             eEECcC--CCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec------CCC-CcceeeEcCCCCEEEEEe-C
Confidence            344567  9999999999998 6777888889999998653 22222222      122 466779999999998885 8


Q ss_pred             CcEEEEeCCCccEEeecc-----------cCCCeEEEEEc-CCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-ceeE
Q psy17902        212 SNIKLWSSSLEHLHTFTG-----------HKAPITGLAIS-FECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-AITS  278 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~  278 (454)
                      +.|.+|++....+..+..           |...+.+++|+ |+|++|++++ ++.|.+|++.++... .+..|.. .+.+
T Consensus       265 ~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~  342 (1045)
T 1k32_A          265 GSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVR  342 (1045)
T ss_dssp             TEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEE
T ss_pred             CEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEe
Confidence            999999995555555544           34578999999 9999999888 789999999887654 4556777 8999


Q ss_pred             EEeecCCCEEEEeeCCCcEE-EeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        279 LDILAKNRVISSGGTDKSVR-VWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       279 ~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      ++|+ +++.|++++.++.+. +|++.++....+..+...+..+.++ ++.+|++++.++.|++||+.++........   
T Consensus       343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~---  418 (1045)
T 1k32_A          343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS---  418 (1045)
T ss_dssp             ECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred             eeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC---
Confidence            9999 999999888888888 9999888776555666666666554 677899999999999999998876665532   


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCCC----------cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYDG----------CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                            +...+.+++|+|+|++|++++.++          .|++||+.+++ +..+..  +...+.+++|+|||++|+++
T Consensus       419 ------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~--~~~~~~~~~~spdG~~l~~~  489 (1045)
T 1k32_A          419 ------REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT--ENSHDYAPAFDADSKNLYYL  489 (1045)
T ss_dssp             ------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC--SSSBEEEEEECTTSCEEEEE
T ss_pred             ------CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC--CCcccCCceEcCCCCEEEEE
Confidence                  234478899999999998887654          89999999876 445544  66678899999999999988


Q ss_pred             ecCCCceeeeee
Q psy17902        427 IGTEHRFGRWKT  438 (454)
Q Consensus       427 ~~~d~~i~~W~~  438 (454)
                       +.++....|+.
T Consensus       490 -s~~~~~~~~~~  500 (1045)
T 1k32_A          490 -SYRSLDPSPDR  500 (1045)
T ss_dssp             -ESCCCCCEECS
T ss_pred             -ecccCCcCcch
Confidence             67777777764

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.93  E-value=1.4e-23  Score=219.42  Aligned_cols=285  Identities=10%  Similarity=0.070  Sum_probs=218.8

Q ss_pred             CCCCeEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC-ceEEEEEeCCCcEEEEecCCCcEE-EE
Q psy17902        141 HRASITCIAVT-SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP-PILALAVANNNELVASGDNNSNIK-LW  217 (454)
Q Consensus       141 h~~~V~~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~v~-vw  217 (454)
                      |...|.+++|+ |+|++|++++ ++.|.+|++.++.... +.      .+.. .+..++|+ +|+.|++++.++.+. +|
T Consensus       294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~------~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~  364 (1045)
T 1k32_A          294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP------EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY  364 (1045)
T ss_dssp             ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS------CCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred             cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc------CCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence            34579999999 9999999988 7899999998766443 22      3555 79999999 999999988888888 88


Q ss_pred             eCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC--
Q psy17902        218 SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK--  295 (454)
Q Consensus       218 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--  295 (454)
                      ++.+.....+..|...+.+++|+|+|++|++++.++.|++||+.+++....+.+|...+.+++|+|+|++|++++.++  
T Consensus       365 d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~  444 (1045)
T 1k32_A          365 DYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG  444 (1045)
T ss_dssp             ETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred             ECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccc
Confidence            996666666668888999999999999999999999999999999988777778999999999999999998887654  


Q ss_pred             --------cEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccc-------eeeecc-----
Q psy17902        296 --------SVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPT-------HTIPVA-----  354 (454)
Q Consensus       296 --------~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~-----  354 (454)
                              .|++||+.++....+..+...+..+. .+++.+|++++.++...+|+.......       ..+...     
T Consensus       445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  524 (1045)
T 1k32_A          445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN  524 (1045)
T ss_dssp             TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred             cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCC
Confidence                    89999999988666777766665554 456778999998888888876433210       000000     


Q ss_pred             ------------------c----CCCCCCCCCCcEEEEEEecCCCEEEE-------------ecCCCcEEEEEcCCCcee
Q psy17902        355 ------------------H----GYDSSSSEPNWITSVACLHNSDLVAS-------------GSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       355 ------------------~----~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~~~dg~v~iwd~~~~~~~  399 (454)
                                        .    .......+...+..++++|+|.++++             ......|.+||+.+++..
T Consensus       525 ~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~  604 (1045)
T 1k32_A          525 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT  604 (1045)
T ss_dssp             GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE
T ss_pred             ccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE
Confidence                              0    00011124466899999999987775             122457888898887643


Q ss_pred             eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        400 EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       400 ~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      . +.     ..+.+++|||||++|+++ +.+ .|++|+..++.
T Consensus       605 ~-l~-----~~v~~~~~S~DG~~l~~~-~~~-~i~~~d~~~~~  639 (1045)
T 1k32_A          605 E-VK-----NNLTDLRLSADRKTVMVR-KDD-GKIYTFPLEKP  639 (1045)
T ss_dssp             E-EE-----EEEEEEEECTTSCEEEEE-ETT-SCEEEEESSCT
T ss_pred             E-ee-----cCcceEEECCCCCEEEEE-cCC-cEEEEeCccCc
Confidence            2 22     568899999999999988 444 89999997765

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.93  E-value=4.5e-23  Score=193.90  Aligned_cols=203  Identities=15%  Similarity=0.106  Sum_probs=153.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee----------cccCCcccCCCCCCceEEEEEeCCCcEEE----
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV----------CSSPFVKTDRKSYPPILALAVANNNELVA----  206 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----  206 (454)
                      +...++.+++++++.+|++++.+| +++|+.......          ...... ....+...|.+++|+|++++|+    
T Consensus        35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~spdg~~lav~~~  112 (434)
T 2oit_A           35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQG-LLVPMKFPIHHLALSCDNLTLSACMM  112 (434)
T ss_dssp             CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCC-EEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred             CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcc-ccccCCCcccEEEEcCCCCEEEEEEe
Confidence            445689999999999999999988 888875421110          000000 0012455799999999999999    


Q ss_pred             EecCCCcEEEEeCC-C--------c---cEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902        207 SGDNNSNIKLWSSS-L--------E---HLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       207 ~~~~dg~v~vw~~~-~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  273 (454)
                      +|+.|+.|+|||+. .        .   .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|.
T Consensus       113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~  192 (434)
T 2oit_A          113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST  192 (434)
T ss_dssp             ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred             ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence            78889999999982 2        1   14556779999999999997 7899999999999999999987777777899


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc-------cCCeEEEEecCCCEEEEE--eCCCC------EE
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH-------SRGIDMTRRVNDQQFITC--GEDGT------LS  338 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~~~l~~~--~~dg~------i~  338 (454)
                      ..|++++|+|+|++|++|+.||.|++||++......+..+       ...+..+.|.+...++++  +.+|.      ++
T Consensus       193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~  272 (434)
T 2oit_A          193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV  272 (434)
T ss_dssp             GCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred             CceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence            9999999999999999999999999999983222233332       225666777666655533  24433      89


Q ss_pred             EEecCCC
Q psy17902        339 LWSILKK  345 (454)
Q Consensus       339 iwd~~~~  345 (454)
                      +|++...
T Consensus       273 i~~l~~~  279 (434)
T 2oit_A          273 MALLPKK  279 (434)
T ss_dssp             EEECCCT
T ss_pred             EEEeccC
Confidence            9999865

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.93  E-value=4.1e-23  Score=208.29  Aligned_cols=282  Identities=9%  Similarity=-0.005  Sum_probs=193.7

Q ss_pred             eEeccCCCCC---CeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC
Q psy17902        134 TKFNGKPHRA---SITCIAVTSDSKHVYSACKD---------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN  201 (454)
Q Consensus       134 ~~~~~~~h~~---~V~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  201 (454)
                      ..+.+  |..   .|.+++|||||++|++++.+         +.|.+||+.++.... +..   ...+...+..++|+||
T Consensus        51 ~~~~~--~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~---~~~~~~~~~~~~~SPd  124 (723)
T 1xfd_A           51 VLIEG--KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS-LDP---PEVSNAKLQYAGWGPK  124 (723)
T ss_dssp             EEECT--TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE-CCC---TTCCSCCCSBCCBCSS
T ss_pred             EEecc--ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe-ccC---CccccccccccEECCC
Confidence            34445  554   49999999999999999864         788999999876521 111   1134445889999999


Q ss_pred             CcEEEEecCCCcEEEEeC-CCccEEeecccCCCe------------------EEEEEcCCCCEEEEEeCCC---------
Q psy17902        202 NELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPI------------------TGLAISFECDTLYSSSNDR---------  253 (454)
Q Consensus       202 ~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~dg---------  253 (454)
                      |++||+++. +.|++|++ .+........+...+                  .+++|+|||+.|++++.++         
T Consensus       125 G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~  203 (723)
T 1xfd_A          125 GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP  203 (723)
T ss_dssp             TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred             CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence            999999886 79999999 444444444433333                  7899999999999987553         


Q ss_pred             -------------------------cEEEEeCCCceeEEEeecc------CCceeEEEeecCCCEEEEeeC----CCcEE
Q psy17902        254 -------------------------SIKVWNIEDRAYVETLFGH------QSAITSLDILAKNRVISSGGT----DKSVR  298 (454)
Q Consensus       254 -------------------------~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~  298 (454)
                                               .|++||+.+++....+..+      ...+.+++|+|+|++|++.+.    +..|+
T Consensus       204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~  283 (723)
T 1xfd_A          204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT  283 (723)
T ss_dssp             CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred             ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence                                     7999999988765555543      677899999999998876643    35799


Q ss_pred             EeeccCCeEEEE-cc-ccCCe-----EEEEecCCCEEEE--EeCCC------CEEEEec-CCCcc--ceeeecccCCCCC
Q psy17902        299 VWKIQEESQLVF-NG-HSRGI-----DMTRRVNDQQFIT--CGEDG------TLSLWSI-LKKVP--THTIPVAHGYDSS  360 (454)
Q Consensus       299 i~d~~~~~~~~~-~~-~~~~i-----~~~~~~~~~~l~~--~~~dg------~i~iwd~-~~~~~--~~~~~~~~~~~~~  360 (454)
                      +||+.+++.... .. +...+     ...+.+++..|+.  +..++      .|.+||+ ..+..  ...+...      
T Consensus       284 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~------  357 (723)
T 1xfd_A          284 LCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG------  357 (723)
T ss_dssp             EEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS------
T ss_pred             EEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC------
Confidence            999998876632 22 22222     3445566776664  44666      5677773 33331  3333211      


Q ss_pred             CCCCCcEEE-EEEecCCCEEEEecCC---CcEEEEEcCCCc--eeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        361 SSEPNWITS-VACLHNSDLVASGSYD---GCVKLWKITPKR--TLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       361 ~~~~~~i~~-~~~s~~~~~l~~~~~d---g~v~iwd~~~~~--~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                         ...+.. ++|+|+|+.|+..+.+   +.++||++....  ....+.. ..+...+..++|+|||++|+..++...
T Consensus       358 ---~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~  432 (723)
T 1xfd_A          358 ---DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG  432 (723)
T ss_dssp             ---SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred             ---CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence               111444 6999999988766554   789999986532  2333332 114566889999999999998755544

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.93  E-value=3.3e-23  Score=189.37  Aligned_cols=264  Identities=9%  Similarity=0.103  Sum_probs=177.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC-CeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD-GIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~v  216 (454)
                      |...+.+++|+|++++|++++.+ +.|.+|++.  ++........     .....+..++|+|++++|++++. ++.|.+
T Consensus        36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~  110 (343)
T 1ri6_A           36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-----ALPGSLTHISTDHQGQFVFVGSYNAGNVSV  110 (343)
T ss_dssp             CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-----ECSSCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred             cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc-----ccCCCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence            77789999999999999998887 999999997  4443211111     11226889999999998866654 789999


Q ss_pred             EeC-CC---ccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-ceeEE----Eeec-cCCceeEEEeecCC
Q psy17902        217 WSS-SL---EHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED-RAYVE----TLFG-HQSAITSLDILAKN  285 (454)
Q Consensus       217 w~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~  285 (454)
                      |++ .+   ..+..+. ....+.+++|+|++++|++++ .++.|.+||+.+ ++...    .+.. ....+.+++|+|++
T Consensus       111 ~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg  189 (343)
T 1ri6_A          111 TRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE  189 (343)
T ss_dssp             EEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred             EECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence            998 22   2233333 344688999999999888887 899999999987 54432    2222 34578899999999


Q ss_pred             CEEEEe-eCCCcEEEeeccC--CeEE---EEcc---c---cCCeEEEEe-cCCCEEEE-EeCCCCEEEEecCC--C--cc
Q psy17902        286 RVISSG-GTDKSVRVWKIQE--ESQL---VFNG---H---SRGIDMTRR-VNDQQFIT-CGEDGTLSLWSILK--K--VP  347 (454)
Q Consensus       286 ~~l~~~-~~dg~i~i~d~~~--~~~~---~~~~---~---~~~i~~~~~-~~~~~l~~-~~~dg~i~iwd~~~--~--~~  347 (454)
                      ++|+++ ..++.|.+|++..  +...   ....   .   ...+..+.+ +++.+|++ +..++.|.+|++..  +  ..
T Consensus       190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~  269 (343)
T 1ri6_A          190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK  269 (343)
T ss_dssp             SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred             CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence            976554 4789999999953  3221   1111   1   112333444 45666664 44789999999973  2  23


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC--CCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT--PKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      +..+...          ..+..++|+|+|++|++++ .++.|.+|++.  ++.. ..+...+......+++|.|+.+
T Consensus       270 ~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~-~~~~~~~~g~~p~~i~~~~~~~  335 (343)
T 1ri6_A          270 EGFQPTE----------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL-HEKGRYAVGQGPMWVVVNAHEG  335 (343)
T ss_dssp             EEEEECS----------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE-EEEEEEECSSSCCEEEEEEEC-
T ss_pred             eeeecCC----------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee-eEccccccCCCCeeEEEEcccC
Confidence            3333221          1167899999999887777 68999999664  4432 2222222334567788877643

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.92  E-value=1.2e-22  Score=186.29  Aligned_cols=276  Identities=12%  Similarity=0.092  Sum_probs=179.7

Q ss_pred             EEEEEe----CCCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEEEeCCCc---c
Q psy17902        156 HVYSAC----KDGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKLWSSSLE---H  223 (454)
Q Consensus       156 ~l~~~~----~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~vw~~~~~---~  223 (454)
                      .|++|+    .++.|.+|.++.  +........     .+...+..++|+|+|+ |++++.   ++.|.+|++...   .
T Consensus         4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~-----~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~   77 (347)
T 3hfq_A            4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLL-----AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK   77 (347)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEE-----EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeee-----eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE
Confidence            455553    245677777654  332221111     2334677899999999 555543   689999999333   3


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-c--eeEEEeec---------cCCceeEEEeecCCCEEEE
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED-R--AYVETLFG---------HQSAITSLDILAKNRVISS  290 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~~  290 (454)
                      +..+..+...+..++|+|++++|++++ .++.|.+|++.. +  ..+..+..         +...+.+++|+|+++++++
T Consensus        78 ~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~  157 (347)
T 3hfq_A           78 LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI  157 (347)
T ss_dssp             EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE
T ss_pred             eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE
Confidence            344455778889999999999998888 678999999962 2  33333321         1224889999999997676


Q ss_pred             eeCCCcEEEeecc-CCeEEE---Eccc-cCCe-EEEEecCCCEEEE-EeCCCCEEEEecCC--CccceeeecccCCCCCC
Q psy17902        291 GGTDKSVRVWKIQ-EESQLV---FNGH-SRGI-DMTRRVNDQQFIT-CGEDGTLSLWSILK--KVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       291 ~~~dg~i~i~d~~-~~~~~~---~~~~-~~~i-~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~  361 (454)
                      ...++.|.+|++. ++....   +... .... ...+.+++.++++ +..++.|.+|++..  +........ .......
T Consensus       158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~-~~~~~~~  236 (347)
T 3hfq_A          158 DLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV-KTIPADY  236 (347)
T ss_dssp             ETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE-ESSCTTC
T ss_pred             eCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee-eecCCCC
Confidence            6678899999998 444331   1111 2233 3444556665555 45788999999874  332111111 1111001


Q ss_pred             CCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        362 SEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .....+..++|+|+|++| ++...++.|.+|++...   ..+..+..  +...+..++|+|||++|+++...++.|.+|+
T Consensus       237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~  314 (347)
T 3hfq_A          237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYA  314 (347)
T ss_dssp             CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence            112458899999999977 45556899999999733   33333332  3456889999999999999866779999996


Q ss_pred             eeC
Q psy17902        438 TIK  440 (454)
Q Consensus       438 ~~~  440 (454)
                      ...
T Consensus       315 ~d~  317 (347)
T 3hfq_A          315 RDL  317 (347)
T ss_dssp             ECT
T ss_pred             EeC
Confidence            643

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.92  E-value=1.1e-23  Score=211.96  Aligned_cols=282  Identities=7%  Similarity=0.005  Sum_probs=195.4

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCccc----------CCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKT----------DRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      +..+.|.  ++.+++++.+| | +||+.+++.  ...+.....          ...+...|.+++|+|+ ..++.+. ++
T Consensus        28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~  101 (706)
T 2z3z_A           28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG  101 (706)
T ss_dssp             CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred             CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence            4556777  66777777788 8 999998876  221111000          0011246999999999 5555554 49


Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----ceeEEEeeccCCc------------
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-----RAYVETLFGHQSA------------  275 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~------------  275 (454)
                      .|++||+.+.....+..+...+.+++|+|+|+.|+++ .++.|++||+.+     ++.......+...            
T Consensus       102 ~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~  180 (706)
T 2z3z_A          102 GLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREF  180 (706)
T ss_dssp             EEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCT
T ss_pred             EEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhc
Confidence            9999999666666666777889999999999999985 679999999998     7766544433332            


Q ss_pred             --eeEEEeecCCCEEEEee---------------------------------CCCcEEEeeccCCeEEEEc---cccCCe
Q psy17902        276 --ITSLDILAKNRVISSGG---------------------------------TDKSVRVWKIQEESQLVFN---GHSRGI  317 (454)
Q Consensus       276 --v~~~~~~~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~---~~~~~i  317 (454)
                        +.++.|+|+|++|++++                                 .+..|++||+.++......   .+...+
T Consensus       181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~  260 (706)
T 2z3z_A          181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL  260 (706)
T ss_dssp             TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred             CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence              48899999999999887                                 4467999999988766433   344556


Q ss_pred             EEEEe-cCCCEEEEEeCCC-----CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec--CCCEEEEecCCCcEE
Q psy17902        318 DMTRR-VNDQQFITCGEDG-----TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVK  389 (454)
Q Consensus       318 ~~~~~-~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~v~  389 (454)
                      ..+.| +++..|++++.++     .|.+||+.++.....+.......    ....+.++.|+|  +|++|++++.||.++
T Consensus       261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~----~~~~~~~~~~sp~~dg~~l~~~~~~g~~~  336 (706)
T 2z3z_A          261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH----YVEPLHPLTFLPGSNNQFIWQSRRDGWNH  336 (706)
T ss_dssp             EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS----CCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred             eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC----eECccCCceeecCCCCEEEEEEccCCccE
Confidence            55555 4667788877665     89999999884333332111100    011246789999  999999999999999


Q ss_pred             EEEcC-CCceeeEeccCCCceeeeE-EEEcCCCCEEEEEecCCC----ceeeeeee
Q psy17902        390 LWKIT-PKRTLEFLQDIPLSGVINS-LVFTSDHKHLVAGIGTEH----RFGRWKTI  439 (454)
Q Consensus       390 iwd~~-~~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~~~~~~d~----~i~~W~~~  439 (454)
                      ||.+. ++..+..+..  +...+.+ ++|+|+|+.|+++++.++    .|..|+..
T Consensus       337 l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  390 (706)
T 2z3z_A          337 LYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK  390 (706)
T ss_dssp             EEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred             EEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence            99887 5666666654  5566766 799999999988766665    55555543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.92  E-value=1.1e-22  Score=186.33  Aligned_cols=262  Identities=9%  Similarity=0.021  Sum_probs=185.2

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeC-CCccE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSS-SLEHL  224 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~-~~~~~  224 (454)
                      .+++++++.++++++.++.|.+||+.+++....+..     .....+..++|+|++++++ ++..++.|.+||+ +++.+
T Consensus         4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~   78 (349)
T 1jmx_B            4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT   78 (349)
T ss_dssp             CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred             cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec-----CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence            457788899999999999999999998877665542     1212477899999998654 5566899999999 45555


Q ss_pred             Eeeccc------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCcee---EEEeeccCCceeEEEeec
Q psy17902        225 HTFTGH------KAPITGLAISFECDTLYSSSND------------RSIKVWNIEDRAY---VETLFGHQSAITSLDILA  283 (454)
Q Consensus       225 ~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~  283 (454)
                      ..+..+      ...+.+++|+|++++|++++.+            +.|.+||+.+++.   +..+. +...+.+++|+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~  157 (349)
T 1jmx_B           79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD  157 (349)
T ss_dssp             EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT
T ss_pred             EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC
Confidence            555432      2337889999999999998865            8999999988543   33333 344688999999


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEEE-EccccC------------------------CeEEEEecCC------------C
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQLV-FNGHSR------------------------GIDMTRRVND------------Q  326 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~------------------------~i~~~~~~~~------------~  326 (454)
                      +++ +++++  +.|++||+.+++... +.....                        ....+.+.++            .
T Consensus       158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  234 (349)
T 1jmx_B          158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG  234 (349)
T ss_dssp             TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred             CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence            999 55554  349999999887663 322210                        0011111110            0


Q ss_pred             EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCCceeeEeccC
Q psy17902        327 QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDI  405 (454)
Q Consensus       327 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~  405 (454)
                      ++......+.+.+|++..                  ....+..++|+| ++++|+++  ++.|.+||+.+++.+..+.. 
T Consensus       235 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-  293 (349)
T 1jmx_B          235 YLSVDLKTGKTHTQEFAD------------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-  293 (349)
T ss_dssp             EEEEETTTCCEEEEEEEE------------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-
T ss_pred             EEEEeccCCcEEeccccc------------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-
Confidence            111222344455554411                  122388999999 99999888  88999999999887777653 


Q ss_pred             CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       406 ~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                        ...+.+++|+|+|++|+++ +.++.|.+|+..++
T Consensus       294 --~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~  326 (349)
T 1jmx_B          294 --DHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTL  326 (349)
T ss_dssp             --SSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTT
T ss_pred             --CCCccceEECCCCCEEEEe-cCCCeEEEEecccc
Confidence              3457899999999999987 77899999998665

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.91  E-value=7.1e-23  Score=201.13  Aligned_cols=267  Identities=10%  Similarity=0.057  Sum_probs=191.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~v  216 (454)
                      +..+|++++|+|||++||+++. ||++.||++.++.......      .+...+..++|+|+ +++++++.   +....+
T Consensus        20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~------~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l   92 (582)
T 3o4h_A           20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR------EPINSVLDPHYGVG-RVILVRDVSKGAEQHAL   92 (582)
T ss_dssp             HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS------SCCSEECEECTTCS-EEEEEEECSTTSCCEEE
T ss_pred             hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec------ccccccccccCCCC-eEEEEeccCCCCcceEE
Confidence            4557999999999999999887 9999999986655433222      23357999999999 77777765   455556


Q ss_pred             Ee--C--CCccEEeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        217 WS--S--SLEHLHTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       217 w~--~--~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      |.  .  .+... .+..+. .+...+|+|+++. +++.+.++.+.+||+.+++...... +..  .+++|+|+|++|+++
T Consensus        93 ~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~  167 (582)
T 3o4h_A           93 FKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGL  167 (582)
T ss_dssp             EEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEE
T ss_pred             EEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEE
Confidence            54  4  44444 333222 3446688888853 4444455556699999887655443 333  889999999999988


Q ss_pred             eCC----CcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCC--CEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        292 GTD----KSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       292 ~~d----g~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +.+    +.|++||+.++....+..+...+....|+ ++..|+++..++  .|++||+.++... .+..         +.
T Consensus       168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~---------~~  237 (582)
T 3o4h_A          168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL---------PS  237 (582)
T ss_dssp             EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC---------SC
T ss_pred             EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC---------CC
Confidence            777    78999999988887777777766665555 567788777888  8999999887765 3221         12


Q ss_pred             CcEEEEE--------EecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc--ee
Q psy17902        365 NWITSVA--------CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR--FG  434 (454)
Q Consensus       365 ~~i~~~~--------~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~--i~  434 (454)
                      ..+..++        |+|+|.++++++.+|++++|++  ++...   .  ..+.|.+++|+ ++++++++++....  +.
T Consensus       238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~--~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~  309 (582)
T 3o4h_A          238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---A--PQGNHGRVVLW-RGKLVTSHTSLSTPPRIV  309 (582)
T ss_dssp             SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---C--CSSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred             cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---c--CCCceEEEEec-CCEEEEEEcCCCCCCeEE
Confidence            2244444        9999999999999999999999  65443   1  34678999999 99988877444433  44


Q ss_pred             eee
Q psy17902        435 RWK  437 (454)
Q Consensus       435 ~W~  437 (454)
                      +|+
T Consensus       310 ~~d  312 (582)
T 3o4h_A          310 SLP  312 (582)
T ss_dssp             EET
T ss_pred             EEc
Confidence            444

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.91  E-value=3.5e-22  Score=178.33  Aligned_cols=236  Identities=11%  Similarity=0.046  Sum_probs=172.8

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC--
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN--  210 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--  210 (454)
                      ..+..  |...|.+++|+|++++|++++ ++.|.+||+.+ +........     .+...+.+++|+|++++|++++.  
T Consensus        35 ~~~~~--~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~  106 (297)
T 2ojh_A           35 RVVWQ--TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG-----FATICNNDHGISPDGALYAISDKVE  106 (297)
T ss_dssp             EEEEE--ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-----TCCCBCSCCEECTTSSEEEEEECTT
T ss_pred             eeecc--CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-----cccccccceEECCCCCEEEEEEeCC
Confidence            34556  889999999999999999987 78999999998 665544321     23467889999999999999983  


Q ss_pred             CCcEEEE--eCCCccEEeecccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeC--CCceeEEEeeccCCceeEEEeecCC
Q psy17902        211 NSNIKLW--SSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWNI--EDRAYVETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       211 dg~v~vw--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~  285 (454)
                      ++.+.||  ++.+.....+..+. .+.+++|+|+++.|+ +++.++.+.+|++  .++. ...+..+...+.+++|+|++
T Consensus       107 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg  184 (297)
T 2ojh_A          107 FGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDG  184 (297)
T ss_dssp             TSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTS
T ss_pred             CCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCC
Confidence            3445555  44555555555444 489999999999887 7778999999985  3343 45566788899999999999


Q ss_pred             CEEEEee-CCCcEEEeecc--CCeEEEEccccCCeEEEEe-cCCCEEEEEeCC-----------CCEEEEecCCCcccee
Q psy17902        286 RVISSGG-TDKSVRVWKIQ--EESQLVFNGHSRGIDMTRR-VNDQQFITCGED-----------GTLSLWSILKKVPTHT  350 (454)
Q Consensus       286 ~~l~~~~-~dg~i~i~d~~--~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~  350 (454)
                      ++|++++ .++.+.+|++.  ......+..+...+..+.+ +++.+|++++.+           +.|.+||+.++.....
T Consensus       185 ~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~  264 (297)
T 2ojh_A          185 RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL  264 (297)
T ss_dssp             SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred             CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence            9877665 58899999886  3334455556656665555 467778777765           5699999988765433


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      .....       +...+.+++|+|++++|++++.+.
T Consensus       265 ~~~~~-------~~~~~~~~~~spdg~~l~~~~~~~  293 (297)
T 2ojh_A          265 FDLFG-------GQGTMNSPNWSPDGDEFAYVRYFP  293 (297)
T ss_dssp             EEEEE-------STTTSCSCCBCTTSSEEEEEEECC
T ss_pred             eccCC-------CCcccccceECCCCCEEEEEEecc
Confidence            32211       233478899999999888887653

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.90  E-value=4.5e-21  Score=175.98  Aligned_cols=242  Identities=7%  Similarity=0.004  Sum_probs=186.4

Q ss_pred             CceEEEEEeCCCcEEEEecC-------CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q psy17902        191 PPILALAVANNNELVASGDN-------NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIE  261 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~-------dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~  261 (454)
                      ..+..++|+|++++|++++.       ++.|.+||. +++.+..+.. ...+.+++|+|++++++++ ..++.|.+||+.
T Consensus        41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~  119 (353)
T 3vgz_A           41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK  119 (353)
T ss_dssp             SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence            36789999999998888774       468999999 5555555543 4457889999999966555 457999999999


Q ss_pred             CceeEEEeeccCCc---------eeEEEeecCCCEEEEee--CCCcEEEeeccCCeEEEEcc-ccCCe-EEEEecCCCEE
Q psy17902        262 DRAYVETLFGHQSA---------ITSLDILAKNRVISSGG--TDKSVRVWKIQEESQLVFNG-HSRGI-DMTRRVNDQQF  328 (454)
Q Consensus       262 ~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~-~~~~i-~~~~~~~~~~l  328 (454)
                      +++.+..+..+...         +.++.|+|+++++++++  .++.|.+||+.+++...... +.... ...+.+++.++
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l  199 (353)
T 3vgz_A          120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL  199 (353)
T ss_dssp             TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred             CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence            99988777654322         78899999999877765  47889999999988773333 33333 34455677889


Q ss_pred             EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCC
Q psy17902        329 ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPL  407 (454)
Q Consensus       329 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~  407 (454)
                      ++++.++.|.+||+.+++....+.....     .+...+..++|+|++++|++++. ++.|.+||+.+++.+..+...  
T Consensus       200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--  272 (353)
T 3vgz_A          200 YTTNADGELITIDTADNKILSRKKLLDD-----GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP--  272 (353)
T ss_dssp             EEECTTSEEEEEETTTTEEEEEEECCCS-----SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--
T ss_pred             EEEcCCCeEEEEECCCCeEEEEEEcCCC-----CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--
Confidence            9999999999999999988877765221     12334889999999997766654 589999999999888777642  


Q ss_pred             ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        408 SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       408 ~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                       . ...++|+|+|++|+++...++.|.+|+..++.
T Consensus       273 -~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~  305 (353)
T 3vgz_A          273 -E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK  305 (353)
T ss_dssp             -S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred             -C-CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence             1 25799999999888886789999999986553

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.90  E-value=2.6e-21  Score=175.97  Aligned_cols=238  Identities=10%  Similarity=0.077  Sum_probs=172.4

Q ss_pred             EEeCCCc-EEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCcee-EEEeecc
Q psy17902        197 AVANNNE-LVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAY-VETLFGH  272 (454)
Q Consensus       197 ~~~~~~~-~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~~~  272 (454)
                      .|.+++. .+++++.++.|.+||+ +++.+..+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+
T Consensus         4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~   82 (331)
T 3u4y_A            4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG   82 (331)
T ss_dssp             ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred             eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence            3555444 5777788899999999 566666666666667 9999999997777666 88999999999887 6666666


Q ss_pred             CCceeEEEeecCCCEEEEeeCCC---cEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEE-EEeCCCC-EEEEecCCCc
Q psy17902        273 QSAITSLDILAKNRVISSGGTDK---SVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFI-TCGEDGT-LSLWSILKKV  346 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~-~~~~dg~-i~iwd~~~~~  346 (454)
                      ..+..+++|+|++++|+++..++   .|.+||+.+++.............+.+ +++++++ +...++. |.+|++....
T Consensus        83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g  162 (331)
T 3u4y_A           83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG  162 (331)
T ss_dssp             SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred             CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence            66666699999999998665553   899999999887743333333444444 4555455 4456688 9999997644


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCCce---eeEeccCCCceeeeEEEEcCCCCE
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPKRT---LEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                      .+.... ....    .....+..++|+|+|++| +++..++.|.+||+.+++.   +..+.   ....+..++|+|||++
T Consensus       163 ~~~~~~-~~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~  234 (331)
T 3u4y_A          163 VLFDTG-QEFI----SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TNNLPGTIVVSRDGST  234 (331)
T ss_dssp             CEEEEE-EEEE----CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CSSCCCCEEECTTSSE
T ss_pred             cEeecC-Cccc----cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CCCCCceEEECCCCCE
Confidence            332221 0000    012237899999999955 4555689999999998887   55555   4467889999999999


Q ss_pred             EEEEecCCCceeeeeeeCCCe
Q psy17902        423 LVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      |+++...++.|.+|+..++..
T Consensus       235 l~v~~~~~~~i~~~d~~~~~~  255 (331)
T 3u4y_A          235 VYVLTESTVDVFNFNQLSGTL  255 (331)
T ss_dssp             EEEECSSEEEEEEEETTTTEE
T ss_pred             EEEEEcCCCEEEEEECCCCce
Confidence            988867788899999876544

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.90  E-value=6.6e-21  Score=175.57  Aligned_cols=271  Identities=9%  Similarity=0.068  Sum_probs=178.9

Q ss_pred             CCCCEEEEEeC----CCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC----CcEEEEeCCC
Q psy17902        152 SDSKHVYSACK----DGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----SNIKLWSSSL  221 (454)
Q Consensus       152 ~~~~~l~~~~~----dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vw~~~~  221 (454)
                      +...++++|+.    ++.|.+|.++.  +........      +...+..++|+|++++|++++.+    +.|.+|++..
T Consensus        11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~------~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~   84 (361)
T 3scy_A           11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA------EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK   84 (361)
T ss_dssp             GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE------ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET
T ss_pred             CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc------cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC
Confidence            33456666643    56899997753  433222111      33466779999999999998875    7999999832


Q ss_pred             --cc---EEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEe------ec--------cCCceeEEEe
Q psy17902        222 --EH---LHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETL------FG--------HQSAITSLDI  281 (454)
Q Consensus       222 --~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~~--------~~~~v~~~~~  281 (454)
                        ..   +.....+......+++  ++++|++++ .++.|.+|++.....+..+      .+        +...+.+++|
T Consensus        85 ~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  162 (361)
T 3scy_A           85 EKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI  162 (361)
T ss_dssp             TTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred             CCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence              22   2333445567777888  788777776 5789999999754322111      11        1234578999


Q ss_pred             ecCCCEEEEee-CCCcEEEeeccCCeE--------------EEEccccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecCC
Q psy17902        282 LAKNRVISSGG-TDKSVRVWKIQEESQ--------------LVFNGHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSILK  344 (454)
Q Consensus       282 ~~~~~~l~~~~-~dg~i~i~d~~~~~~--------------~~~~~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~  344 (454)
                      +|++++|++++ .++.|.+|++.....              ............+. .+++.++++++ .++.|.+|++.+
T Consensus       163 spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~  242 (361)
T 3scy_A          163 TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD  242 (361)
T ss_dssp             CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred             CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence            99999665554 578999998875431              11222233344444 45666777666 689999999986


Q ss_pred             Cccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC--CCcEEEEEcC--CCc--eeeEeccCCCceeeeEEEE
Q psy17902        345 KVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY--DGCVKLWKIT--PKR--TLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       345 ~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~--~~~--~~~~~~~~~~~~~v~~l~~  416 (454)
                      +...  ..+....      .+......++|+|+|++|+++..  ++.|.+|++.  ++.  .+..+.   ....+.+++|
T Consensus       243 g~~~~~~~~~~~~------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~g~~~~~~~~  313 (361)
T 3scy_A          243 GMLDEIQTVAADT------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL---TGIHPRNFII  313 (361)
T ss_dssp             TEEEEEEEEESCS------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE---CSSCCCEEEE
T ss_pred             CceEEeEEEecCC------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec---CCCCCceEEE
Confidence            6432  2222111      12233689999999998876665  4899999996  343  233332   2456889999


Q ss_pred             cCCCCEEEEEecCCCceeeeeee
Q psy17902        417 TSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       417 s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      +|||++|+++...++.|.+|...
T Consensus       314 spdg~~l~~~~~~~~~v~v~~~d  336 (361)
T 3scy_A          314 TPNGKYLLVACRDTNVIQIFERD  336 (361)
T ss_dssp             CTTSCEEEEEETTTTEEEEEEEC
T ss_pred             CCCCCEEEEEECCCCCEEEEEEE
Confidence            99999999996688999997665

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.90  E-value=1.8e-21  Score=181.23  Aligned_cols=291  Identities=7%  Similarity=-0.015  Sum_probs=194.2

Q ss_pred             eEeEeccCCCCCCeEE-----EEEcCCCCEEEEEeC-CC--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc
Q psy17902        132 VCTKFNGKPHRASITC-----IAVTSDSKHVYSACK-DG--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE  203 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~-----~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  203 (454)
                      ....+..  |......     .+|+|||++|+.++. +|  .|.+||+.++.......      .+...+..++|+|+|+
T Consensus        22 ~~~~lt~--~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~------~~~~~~~~~~~spdg~   93 (388)
T 3pe7_A           22 QVTRLTP--PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE------GRGDNTFGGFLSPDDD   93 (388)
T ss_dssp             EEEECSC--TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC------SSCBCSSSCEECTTSS
T ss_pred             ceEEecC--CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee------CCCCCccceEEcCCCC
Confidence            3445555  6665665     889999999999887 66  48888998877655433      3433444678999999


Q ss_pred             EEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEE--EcCCCCEEEEE----------------------eCCCcEEEE
Q psy17902        204 LVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLA--ISFECDTLYSS----------------------SNDRSIKVW  258 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~~dg~i~iw  258 (454)
                      .|++++.++.|++||+ .+.....+..+...+....  +++++.+++..                      ..++.|.+|
T Consensus        94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  173 (388)
T 3pe7_A           94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV  173 (388)
T ss_dssp             EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred             EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence            9999999999999999 4444444455555454444  48899888743                      245789999


Q ss_pred             eCCCceeEEEeeccCCceeEEEeec-CCCEEEEeeCC------CcEEEeeccCCeEEEEccccC--CeEE-EEecCCCEE
Q psy17902        259 NIEDRAYVETLFGHQSAITSLDILA-KNRVISSGGTD------KSVRVWKIQEESQLVFNGHSR--GIDM-TRRVNDQQF  328 (454)
Q Consensus       259 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~i~~-~~~~~~~~l  328 (454)
                      |+.+++.. .+..+...+..+.|+| +++.|+.+..+      ..|.++|+.......+..+..  .+.. .+.+++..|
T Consensus       174 d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l  252 (388)
T 3pe7_A          174 DLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL  252 (388)
T ss_dssp             ETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred             ECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence            99988654 4445677789999999 99888776653      378888887765554444432  2433 444566666


Q ss_pred             EEEeC-CC----CEEEEecCCCccceeeecccCCCCCCCCC-CcEEEEEEecCCCEEEEe---------cCCCcEEEEEc
Q psy17902        329 ITCGE-DG----TLSLWSILKKVPTHTIPVAHGYDSSSSEP-NWITSVACLHNSDLVASG---------SYDGCVKLWKI  393 (454)
Q Consensus       329 ~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~---------~~dg~v~iwd~  393 (454)
                      +..+. ++    .|++||+.+++......... ..    +. .....+.|+|+|+.|+..         ..+..|++||+
T Consensus       253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~  327 (388)
T 3pe7_A          253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPA-CS----HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM  327 (388)
T ss_dssp             EEEEEETTCCCEEEEEECTTTCCEEEEEEECC-EE----EEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred             EEEecCCCCCcceEEEEecCCCceEEEEcCCC-ce----eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence            55442 22    39999998886433222111 00    00 001113699999977754         45668999999


Q ss_pred             CCCceeeEeccCCCce-----------eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        394 TPKRTLEFLQDIPLSG-----------VINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       394 ~~~~~~~~~~~~~~~~-----------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .++... .+..  +..           .+.+++|+|||+.|+.++..++...+|...
T Consensus       328 ~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~  381 (388)
T 3pe7_A          328 KNGTQH-RVAR--HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT  381 (388)
T ss_dssp             TTTEEE-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             cCCceE-Eecc--ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence            887543 3333  223           478899999999999886777777777654

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.90  E-value=2.2e-21  Score=182.35  Aligned_cols=245  Identities=16%  Similarity=0.160  Sum_probs=177.2

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCC-----------ccEEe-----ecccCCCeEEEEEcCCCCEEE----EEeC
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSL-----------EHLHT-----FTGHKAPITGLAISFECDTLY----SSSN  251 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-----------~~~~~-----~~~~~~~v~~~~~~~~~~~l~----~~~~  251 (454)
                      .++.+++++++.++++++.++ +++|+...           ..+..     ...+...|++++|+|++++|+    +|+.
T Consensus        38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~  116 (434)
T 2oit_A           38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY  116 (434)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred             CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence            578899999999999999888 88887410           11111     123567899999999999999    7888


Q ss_pred             CCcEEEEeCCCc--------e---eEEEeeccCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeE
Q psy17902        252 DRSIKVWNIEDR--------A---YVETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGID  318 (454)
Q Consensus       252 dg~i~iwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~  318 (454)
                      |+.|++||+.++        +   .+..+.+|...|++++|+|+ +++|++++.||+|++||++++... ...+|...+.
T Consensus       117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~  196 (434)
T 2oit_A          117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT  196 (434)
T ss_dssp             EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred             CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence            999999998764        1   24556679999999999998 789999999999999999988665 4556777888


Q ss_pred             EEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCC------cEEE
Q psy17902        319 MTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDG------CVKL  390 (454)
Q Consensus       319 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg------~v~i  390 (454)
                      ++.|. ++.+|++|+.||.|++||++ +.....+......  ...|...+.++.|++++.++++. +.+|      .+++
T Consensus       197 ~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~--~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i  273 (434)
T 2oit_A          197 SVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY--ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM  273 (434)
T ss_dssp             EEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC--CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred             EEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc--CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence            77776 57799999999999999998 5444444332211  11234469999999988877543 3443      3899


Q ss_pred             EEcCCCc-----eeeEeccC-----CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        391 WKITPKR-----TLEFLQDI-----PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       391 wd~~~~~-----~~~~~~~~-----~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |++....     ....+...     ....+-..+.+.++.++++++.+..+.|.++....
T Consensus       274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~  333 (434)
T 2oit_A          274 ALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS  333 (434)
T ss_dssp             EECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred             EEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence            9997642     11222111     11222333445588889988878788787777543

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.89  E-value=2.3e-21  Score=176.58  Aligned_cols=244  Identities=13%  Similarity=0.092  Sum_probs=179.4

Q ss_pred             CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------------C
Q psy17902        144 SITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------------N  210 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------~  210 (454)
                      .+.+++|+|++++++ ++..++.|.+||+.+++....+..... ..+...+.+++|+|++++|++++            .
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~  113 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ  113 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc-ccccccccceEECCCCCEEEEEeccccccccccccc
Confidence            478999999998765 455678999999998887655442110 00112567899999999988886            5


Q ss_pred             CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      ++.|.+||+ ++..+..+.. ...+.+++|+|++++|+++  ++.|.+||+.+++.+..+..+.. ...+.|+|++..++
T Consensus       114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~  189 (337)
T 1pby_B          114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVW  189 (337)
T ss_dssp             CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCC
T ss_pred             CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEe
Confidence            799999999 4445555543 4567889999999988888  68999999999988777654431 11337889987665


Q ss_pred             EeeCCC------------------------cEEEeeccCCeEE--EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEec
Q psy17902        290 SGGTDK------------------------SVRVWKIQEESQL--VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       290 ~~~~dg------------------------~i~i~d~~~~~~~--~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~  342 (454)
                      .++..+                        .|.+||+.+++..  .+..+...+..+.+ +++.+++++  ++.|.+||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~  267 (337)
T 1pby_B          190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL  267 (337)
T ss_dssp             CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred             eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence            544332                        4689999988765  23334334444444 456677766  799999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      .+++.+..+....          .+.+++|+|+|++|++++.++.|.+||+.+++.+..+..
T Consensus       268 ~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~  319 (337)
T 1pby_B          268 EKNASIKRVPLPH----------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             TTTEEEEEEECSS----------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             CCCcCcceecCCC----------ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence            9988877765432          267899999999999999999999999999988877764

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.88  E-value=2.1e-20  Score=171.18  Aligned_cols=245  Identities=13%  Similarity=0.118  Sum_probs=163.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACK---DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~v  216 (454)
                      +...+..++|+|+|+ |++++.   ++.|.+|++.++........    ..+...+..++|+|+|++|++++ .++.|.+
T Consensus        38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~----~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v  112 (347)
T 3hfq_A           38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV----VAPGTPPAYVAVDEARQLVYSANYHKGTAEV  112 (347)
T ss_dssp             ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE----EEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred             ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee----ecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence            556788899999999 555554   68999999976553211110    12455788999999999888887 6789999


Q ss_pred             EeCC-Ccc---EEeecc---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeE--EEeec-cCCceeEE
Q psy17902        217 WSSS-LEH---LHTFTG---------HKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYV--ETLFG-HQSAITSL  279 (454)
Q Consensus       217 w~~~-~~~---~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~--~~~~~-~~~~v~~~  279 (454)
                      |++. ...   +..+..         +...+.+++|+|+++++++...++.|.+|++. ++...  ..+.. ....+..+
T Consensus       113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~  192 (347)
T 3hfq_A          113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL  192 (347)
T ss_dssp             EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred             EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence            9983 222   222221         12348899999999966666668899999998 45432  22222 23367889


Q ss_pred             EeecCCCEEEE-eeCCCcEEEeeccC--CeEE---EEcccc------CCeEEEE-ecCCCEE-EEEeCCCCEEEEecCCC
Q psy17902        280 DILAKNRVISS-GGTDKSVRVWKIQE--ESQL---VFNGHS------RGIDMTR-RVNDQQF-ITCGEDGTLSLWSILKK  345 (454)
Q Consensus       280 ~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~~---~~~~~~------~~i~~~~-~~~~~~l-~~~~~dg~i~iwd~~~~  345 (454)
                      +|+|+|++|++ +..++.|.+|++..  +...   ......      .....+. .+++.+| ++...++.|.+|++...
T Consensus       193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~  272 (347)
T 3hfq_A          193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD  272 (347)
T ss_dssp             EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence            99999996655 56788999999884  4432   122111      1244444 4566666 45557899999999733


Q ss_pred             ---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEc--CCCcee
Q psy17902        346 ---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKI--TPKRTL  399 (454)
Q Consensus       346 ---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~--~~~~~~  399 (454)
                         ..+..+..         +...+..++|+|+|++|++++. ++.|.+|++  .+++..
T Consensus       273 g~~~~~~~~~~---------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~  323 (347)
T 3hfq_A          273 GHLTLIQQIST---------EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS  323 (347)
T ss_dssp             GCEEEEEEEEC---------SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred             CcEEEeEEEec---------CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence               23333322         1223778999999998887765 489999955  455443

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.88  E-value=4e-20  Score=170.45  Aligned_cols=278  Identities=7%  Similarity=0.015  Sum_probs=178.4

Q ss_pred             EEEEEeCC--CeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC--CccEEeecc
Q psy17902        156 HVYSACKD--GIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS--LEHLHTFTG  229 (454)
Q Consensus       156 ~l~~~~~d--g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--~~~~~~~~~  229 (454)
                      +|++|+..  +.|.+|+++  ++........ .  ......+..++|+|++++|++++.+ .|.+|++.  +........
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~-~--~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~   79 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRT-E--IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH   79 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEE-E--CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEE-c--cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence            45566553  467777653  3332211000 0  0123367789999999999988877 99999983  433322221


Q ss_pred             -cCCCeEEEEEcCCCCE--EEEEe-------------CCCcEEEEeCC-CceeEEEee----ccCCceeEEEeecCCCEE
Q psy17902        230 -HKAPITGLAISFECDT--LYSSS-------------NDRSIKVWNIE-DRAYVETLF----GHQSAITSLDILAKNRVI  288 (454)
Q Consensus       230 -~~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l  288 (454)
                       ..+.+.+++|+|++++  +++++             .+|.+.+|++. .++....+.    .+...+.+++|+|+|++|
T Consensus        80 ~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l  159 (365)
T 1jof_A           80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL  159 (365)
T ss_dssp             ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred             ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence             1133566899999984  44553             68999999997 455443332    245678999999999988


Q ss_pred             EEeeC-CCcEEEeecc-CCeEE---EEc--cccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecC--CCccce---eeecc
Q psy17902        289 SSGGT-DKSVRVWKIQ-EESQL---VFN--GHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSIL--KKVPTH---TIPVA  354 (454)
Q Consensus       289 ~~~~~-dg~i~i~d~~-~~~~~---~~~--~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~---~~~~~  354 (454)
                      +++.. ++.|++|++. +++..   .+.  .+......+. .+++.++++++ .++.|.+|++.  ++....   .+...
T Consensus       160 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~  239 (365)
T 1jof_A          160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI  239 (365)
T ss_dssp             EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred             EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence            77654 6799999998 66543   122  1233444444 45666777766 47899999875  344321   22211


Q ss_pred             cCCCCCCCCCC------cEEEEE-EecCCCEEEEecCCC------cEEEEEcC-CCceeeE---eccCCCceeeeEEEEc
Q psy17902        355 HGYDSSSSEPN------WITSVA-CLHNSDLVASGSYDG------CVKLWKIT-PKRTLEF---LQDIPLSGVINSLVFT  417 (454)
Q Consensus       355 ~~~~~~~~~~~------~i~~~~-~s~~~~~l~~~~~dg------~v~iwd~~-~~~~~~~---~~~~~~~~~v~~l~~s  417 (454)
                      ..  ....+..      .+..++ |+|+|++|++++.+.      +|.+|++. +++....   +..  +...+..++|+
T Consensus       240 ~~--~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~--~~~~~~~~a~s  315 (365)
T 1jof_A          240 PP--GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT--PTSGGHSNAVS  315 (365)
T ss_dssp             CT--TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC--SSCCTTCCCEE
T ss_pred             CC--CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec--CCCCcccceec
Confidence            10  0001121      488999 999999887765432      89999996 5554331   221  33456789999


Q ss_pred             C---CCCEEEEEecCCCceeeeeeeCC
Q psy17902        418 S---DHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       418 ~---d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      |   ||++|+++...++.|.+|+....
T Consensus       316 p~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          316 PCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            9   89999999556799999998765

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.88  E-value=1.7e-21  Score=196.34  Aligned_cols=274  Identities=10%  Similarity=0.011  Sum_probs=187.6

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---------CCcEEEE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---------NSNIKLW  217 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~v~vw  217 (454)
                      +++|+|++.++++ +.||.|++||+.++...........   ....+.+++|||||++|++++.         ++.|++|
T Consensus        20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~   95 (719)
T 1z68_A           20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTM---KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY   95 (719)
T ss_dssp             CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHH---HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccc---cccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence            6799999965554 5699999999999876554431100   0013889999999999998876         6899999


Q ss_pred             eCCCccE---EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCce-----------------
Q psy17902        218 SSSLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAI-----------------  276 (454)
Q Consensus       218 ~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v-----------------  276 (454)
                      |+.+...   ..+   ...+.+++|+|||+.|+.+. ++.|++|++.++...... .++...|                 
T Consensus        96 d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~  171 (719)
T 1z68_A           96 DLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK  171 (719)
T ss_dssp             ETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred             ECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence            9955544   333   35688999999999999986 789999999888765432 2222222                 


Q ss_pred             eEEEeecCCCEEEEeeCCC----------------------------------cEEEeeccCCeEE---E------Eccc
Q psy17902        277 TSLDILAKNRVISSGGTDK----------------------------------SVRVWKIQEESQL---V------FNGH  313 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~---~------~~~~  313 (454)
                      .+++|+|||++|++++.|.                                  .|++||+.++...   .      +.++
T Consensus       172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~  251 (719)
T 1z68_A          172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS  251 (719)
T ss_dssp             CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred             ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence            4899999999999887652                                  7889999877641   1      1245


Q ss_pred             cCCeEEEEecCCCEEEEE-eCC----CCEEEEe----cCCCccceeee---cccCCCCCCCCCCcEE-----EEEEecCC
Q psy17902        314 SRGIDMTRRVNDQQFITC-GED----GTLSLWS----ILKKVPTHTIP---VAHGYDSSSSEPNWIT-----SVACLHNS  376 (454)
Q Consensus       314 ~~~i~~~~~~~~~~l~~~-~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~~~~~~~i~-----~~~~s~~~  376 (454)
                      ...+..+.|+++..++.. ...    ..|.+||    +.+++....+.   ..        +..++.     .+.|+|+|
T Consensus       252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~spdg  323 (719)
T 1z68_A          252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES--------RTGWAGGFFVSTPVFSYDA  323 (719)
T ss_dssp             CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC--------SSSCSSSSSCCCCEECTTS
T ss_pred             cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc--------CCceEccccCCccEECCCC
Confidence            556666666655655443 322    2488899    77766554432   11        223344     68899999


Q ss_pred             CEEE--EecCCC--cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC----CCceeeeeeeC
Q psy17902        377 DLVA--SGSYDG--CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT----EHRFGRWKTIK  440 (454)
Q Consensus       377 ~~l~--~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~----d~~i~~W~~~~  440 (454)
                      +.|+  ++..+|  .|.+|++.++. ...+..  +...+..+.++ +++.|+.++..    ++.+.+|....
T Consensus       324 ~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~--~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~  391 (719)
T 1z68_A          324 ISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS--GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI  391 (719)
T ss_dssp             SCEEEEEECTTSCEEEEEESSCSTT-CEECSC--SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred             CeEEEEEEccCCceEEEEEECCCCc-eEeccc--CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence            9544  344555  46667776655 344443  44457777777 88888887544    57888998754

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.88  E-value=1.3e-19  Score=166.79  Aligned_cols=261  Identities=10%  Similarity=0.071  Sum_probs=170.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD----GIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v  214 (454)
                      |...+..++|+|++++|++++.+    |.|.+|++... .....+...   ..+...+..+++  ++++|++++ .++.|
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~---~~~~~~p~~~~~--dg~~l~~~~~~~~~v  122 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ---KTMGADPCYLTT--NGKNIVTANYSGGSI  122 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE---ECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe---ccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence            45567889999999999999886    79999988763 111111100   023345677777  777776665 57899


Q ss_pred             EEEeCC-CccEEee------c--------ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCce-------e------
Q psy17902        215 KLWSSS-LEHLHTF------T--------GHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRA-------Y------  265 (454)
Q Consensus       215 ~vw~~~-~~~~~~~------~--------~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~-------~------  265 (454)
                      .+|++. ...+..+      .        .+...+.+++|+|++++|++++. ++.|.+|++....       .      
T Consensus       123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~  202 (361)
T 3scy_A          123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP  202 (361)
T ss_dssp             EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred             EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence            999983 2222111      1        12334688999999997766654 7899999887543       1      


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEEE---Ecc---ccCCeEEE-EecCCCEEEEEeC--CC
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQLV---FNG---HSRGIDMT-RRVNDQQFITCGE--DG  335 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~---~~~---~~~~i~~~-~~~~~~~l~~~~~--dg  335 (454)
                      ......+...+.+++|+|++++|++++ .++.|.+|++.++....   ...   +......+ +.+++.+|+++..  ++
T Consensus       203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~  282 (361)
T 3scy_A          203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD  282 (361)
T ss_dssp             EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred             cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence            111223455678999999999887776 68999999998775431   111   11223344 4456777766664  48


Q ss_pred             CEEEEecC--CCc--cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC--CCceeeEeccCCCc
Q psy17902        336 TLSLWSIL--KKV--PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT--PKRTLEFLQDIPLS  408 (454)
Q Consensus       336 ~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~--~~~~~~~~~~~~~~  408 (454)
                      .|.+|++.  ++.  .+..+..  +        ..+..++|+|+|++|++++ .++.|.+|.+.  +++....... .+.
T Consensus       283 ~i~v~~~~~~~g~~~~~~~~~~--g--------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~-~~~  351 (361)
T 3scy_A          283 GVAIFKVDETNGTLTKVGYQLT--G--------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKD-IKV  351 (361)
T ss_dssp             EEEEEEECTTTCCEEEEEEEEC--S--------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCC-EEC
T ss_pred             EEEEEEEcCCCCcEEEeeEecC--C--------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeeccee-eeC
Confidence            99999996  333  2333322  1        1267899999999888877 67899997654  5554433222 133


Q ss_pred             eeeeEEEEc
Q psy17902        409 GVINSLVFT  417 (454)
Q Consensus       409 ~~v~~l~~s  417 (454)
                      ..+.|++|.
T Consensus       352 ~~p~~v~~~  360 (361)
T 3scy_A          352 DKPVCLKFV  360 (361)
T ss_dssp             SSEEEEEEE
T ss_pred             CCCeEEEEc
Confidence            467888886

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.86  E-value=1.7e-20  Score=188.99  Aligned_cols=279  Identities=13%  Similarity=0.023  Sum_probs=186.0

Q ss_pred             CeEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902        144 SITCIAVTSDSKHVYSACK---------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI  214 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v  214 (454)
                      .|.+++|||||++|++++.         ++.|++||+.+++......+       ...+..++|||||+.||++. ++.|
T Consensus        61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-------~~~~~~~~~SPDG~~la~~~-~~~i  132 (719)
T 1z68_A           61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-------PRPIQYLCWSPVGSKLAYVY-QNNI  132 (719)
T ss_dssp             TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-------CSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred             ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-------CcccccceECCCCCEEEEEE-CCeE
Confidence            4899999999999999876         78999999998876321221       13588899999999999986 7899


Q ss_pred             EEEeC-CCccEEee-cccCCCe-----------------EEEEEcCCCCEEEEEeCCC----------------------
Q psy17902        215 KLWSS-SLEHLHTF-TGHKAPI-----------------TGLAISFECDTLYSSSNDR----------------------  253 (454)
Q Consensus       215 ~vw~~-~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg----------------------  253 (454)
                      ++|++ .+...... .++...|                 .+++|+|||++|++++.|.                      
T Consensus       133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~  212 (719)
T 1z68_A          133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI  212 (719)
T ss_dssp             EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred             EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence            99999 44333222 2333322                 4899999999999987652                      


Q ss_pred             ------------cEEEEeCCCceeE---E-----EeeccCCceeEEEeecCCCEEEEeeCC----CcEEEee----ccCC
Q psy17902        254 ------------SIKVWNIEDRAYV---E-----TLFGHQSAITSLDILAKNRVISSGGTD----KSVRVWK----IQEE  305 (454)
Q Consensus       254 ------------~i~iwd~~~~~~~---~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~  305 (454)
                                  .|++||+.+++..   .     .+.+|...+.+++|+|+++++++....    ..|.+||    +.++
T Consensus       213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g  292 (719)
T 1z68_A          213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW  292 (719)
T ss_dssp             ECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred             cCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence                        7889999988642   1     233578889999999998777764432    2488899    7666


Q ss_pred             eEEEE-----ccccCCeE------EEEecCCCEEEE--EeCCC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        306 SQLVF-----NGHSRGID------MTRRVNDQQFIT--CGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       306 ~~~~~-----~~~~~~i~------~~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      +...+     ..+...+.      ..+.+++..++.  ...+|  .|.+||+.++. ...+..         +...+..+
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~---------~~~~v~~~  362 (719)
T 1z68_A          293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS---------GKWEAINI  362 (719)
T ss_dssp             ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC---------SSSCEEEE
T ss_pred             ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc---------CceEEEEE
Confidence            55422     24444443      344456665443  44555  46667776654 222221         12237777


Q ss_pred             EEecCCCEEEEecCC-----CcEEEEEcCC--Cc-eeeEecc-C-CCceeeeEEEEcCCCCEEEEEecCC--Cceeeeee
Q psy17902        371 ACLHNSDLVASGSYD-----GCVKLWKITP--KR-TLEFLQD-I-PLSGVINSLVFTSDHKHLVAGIGTE--HRFGRWKT  438 (454)
Q Consensus       371 ~~s~~~~~l~~~~~d-----g~v~iwd~~~--~~-~~~~~~~-~-~~~~~v~~l~~s~d~~~l~~~~~~d--~~i~~W~~  438 (454)
                      .++ +++.|+..+.+     +.+++|.+..  +. ....+.. . .+...+..+.|+||+++|+..++..  ..+.+|+.
T Consensus       363 ~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~  441 (719)
T 1z68_A          363 FRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG  441 (719)
T ss_dssp             EEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred             EEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence            777 77766655554     8899998864  32 1233331 1 1445678899999999888654443  45677876


Q ss_pred             eCC
Q psy17902        439 IKG  441 (454)
Q Consensus       439 ~~~  441 (454)
                      .++
T Consensus       442 ~~g  444 (719)
T 1z68_A          442 RTD  444 (719)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            544

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.86  E-value=1.2e-20  Score=185.22  Aligned_cols=231  Identities=8%  Similarity=-0.010  Sum_probs=169.4

Q ss_pred             CCceEEEEEeCCCcEEEEecC-CCcEEEEeCCCccEEeecccC-CCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCC--
Q psy17902        190 YPPILALAVANNNELVASGDN-NSNIKLWSSSLEHLHTFTGHK-APITGLAISFECDTLYSSSN---DRSIKVWNIED--  262 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~--  262 (454)
                      ..+|.+++|+|||++||+++. +|++.||++.+.....+..|. ..+.+++|+|+ +.+++++.   +....+|.+..  
T Consensus        21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~   99 (582)
T 3o4h_A           21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR   99 (582)
T ss_dssp             HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred             ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence            347999999999999999887 999999999666666666666 68999999999 77777765   44455654432  


Q ss_pred             -ceeEEEeeccCCceeEEEeecCCC-EEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC----CC
Q psy17902        263 -RAYVETLFGHQSAITSLDILAKNR-VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED----GT  336 (454)
Q Consensus       263 -~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d----g~  336 (454)
                       +... .+..+ ..+...+|+|+++ .+++.+.++.+.+||+.++....+..+.. ....+.+++.++++++.+    +.
T Consensus       100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~  176 (582)
T 3o4h_A          100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVS  176 (582)
T ss_dssp             TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEE
T ss_pred             CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeE
Confidence             2222 33222 2344678888885 33444445556699999988775554444 555667788999987766    78


Q ss_pred             EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--cEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902        337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--CVKLWKITPKRTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~l  414 (454)
                      |++||+.++... .+..         +...+..++|||||++|+++..+|  .|++||+.++... .+..  +...+..+
T Consensus       177 i~~~d~~~g~~~-~l~~---------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~--~~~~~~~~  243 (582)
T 3o4h_A          177 LFTSNLSSGGLR-VFDS---------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL--PSKDFSSY  243 (582)
T ss_dssp             EEEEETTTCCCE-EECC---------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC--SCSHHHHH
T ss_pred             EEEEcCCCCCce-Eeec---------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC--CCcChhhh
Confidence            999999887654 3321         344589999999999999888888  8999999988766 5443  55566666


Q ss_pred             E--------EcCCCCEEEEEecCCCceeeeee
Q psy17902        415 V--------FTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       415 ~--------~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +        |+|||..++++ +.++.+.+|..
T Consensus       244 ~~~~~~~~~~spdg~~~~~~-~~~g~~~l~~~  274 (582)
T 3o4h_A          244 RPTAITWLGYLPDGRLAVVA-RREGRSAVFID  274 (582)
T ss_dssp             CCSEEEEEEECTTSCEEEEE-EETTEEEEEET
T ss_pred             hhccccceeEcCCCcEEEEE-EcCCcEEEEEE
Confidence            6        99999655555 88999999987

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.86  E-value=3.1e-20  Score=187.19  Aligned_cols=288  Identities=9%  Similarity=-0.009  Sum_probs=184.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---------C
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---------S  212 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g  212 (454)
                      .....+++|+|++.+|+++  ||.|++||+.++.....+..... .........++|||||++|++++.+         +
T Consensus        16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~   92 (740)
T 4a5s_A           16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF-DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA   92 (740)
T ss_dssp             CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT-TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred             cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh-hhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence            3346689999999999886  89999999999876544332110 1111233458999999999998875         5


Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCce---------------
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAI---------------  276 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v---------------  276 (454)
                      .+.+||+.+..+..+..|...+...+|||||+.|+.+. ++.|++|++.++...+.. .++...+               
T Consensus        93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~  171 (740)
T 4a5s_A           93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS  171 (740)
T ss_dssp             EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred             EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence            67799997776777888888999999999999999885 689999999887754321 2232222               


Q ss_pred             --eEEEeecCCCEEEEeeCCCc-EEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC---Ccccee
Q psy17902        277 --TSLDILAKNRVISSGGTDKS-VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK---KVPTHT  350 (454)
Q Consensus       277 --~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~  350 (454)
                        .++.|+|||+.|+.++.|.. +.+|++.......  .+......+.++....   ......|++||+.+   +..+..
T Consensus       172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~--~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~  246 (740)
T 4a5s_A          172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES--LQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATS  246 (740)
T ss_dssp             SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT--CSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCE
T ss_pred             CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC--CCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceE
Confidence              35899999999988876554 8888764211100  1222223333332110   01123689999988   642222


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEEEEec----CCCcEEEEEcCCCc----e--eeEeccCCCceeee-----EEE
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGS----YDGCVKLWKITPKR----T--LEFLQDIPLSGVIN-----SLV  415 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~v~iwd~~~~~----~--~~~~~~~~~~~~v~-----~l~  415 (454)
                      ....... ....+...+..++|+|+|++++...    .+..|.+||+.+++    +  +..+....+.+.|.     ..+
T Consensus       247 ~~l~~~~-~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~  325 (740)
T 4a5s_A          247 IQITAPA-SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH  325 (740)
T ss_dssp             EEECCCH-HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred             EEecCCc-cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence            2111100 0001355699999999999666543    23479999999886    2  22221112444444     789


Q ss_pred             EcCCCCEEE-EEecCCCc--eeeeeee
Q psy17902        416 FTSDHKHLV-AGIGTEHR--FGRWKTI  439 (454)
Q Consensus       416 ~s~d~~~l~-~~~~~d~~--i~~W~~~  439 (454)
                      |+|||+.|+ ..+..+|.  |.+|+..
T Consensus       326 fspDG~~l~~~~s~~~G~~~l~~~~~~  352 (740)
T 4a5s_A          326 FTLDGNSFYKIISNEEGYRHICYFQID  352 (740)
T ss_dssp             ECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred             EcCCCCEEEEEEEcCCCceEEEEEECC
Confidence            999999887 55344543  5555543

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.86  E-value=4.9e-20  Score=171.87  Aligned_cols=274  Identities=8%  Similarity=-0.097  Sum_probs=182.2

Q ss_pred             CeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        144 SITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      .+.+++|+|+|++|+.+...   ..|.+|++.++.......      ........+.|+|+|++|+.++.++.|++|++.
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~  110 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLE  110 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec------CCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence            37788999999998877543   478888998876543322      122222337899999999999988899999994


Q ss_pred             Ccc-EEeecccCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcEEEEeCCCceeEEEeeccCCc
Q psy17902        221 LEH-LHTFTGHKAPITG-------------------LAISFECDTLYSS-----SNDRSIKVWNIEDRAYVETLFGHQSA  275 (454)
Q Consensus       221 ~~~-~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~  275 (454)
                      +.. ......+......                   +.|+|+++.++.+     ..+..|++||+.+++..... .+...
T Consensus       111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~  189 (396)
T 3c5m_A          111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW  189 (396)
T ss_dssp             TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC
T ss_pred             CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc
Confidence            433 3333333332222                   3456777766554     35678999999988765444 56778


Q ss_pred             eeEEEeec-CCCEEEEeeCC------CcEEEeeccCCeEEEEcccc--CCeEEEEe-cCCCEEEEEeCC-----CCEEEE
Q psy17902        276 ITSLDILA-KNRVISSGGTD------KSVRVWKIQEESQLVFNGHS--RGIDMTRR-VNDQQFITCGED-----GTLSLW  340 (454)
Q Consensus       276 v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~--~~i~~~~~-~~~~~l~~~~~d-----g~i~iw  340 (454)
                      +..+.|+| ++..|+..+.+      ..|.+||+..+....+..+.  ..+..+.+ +++..|+.++.+     +.|++|
T Consensus       190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  269 (396)
T 3c5m_A          190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA  269 (396)
T ss_dssp             EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred             cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence            89999999 78766665543      46888998776544433332  13444444 466667666543     349999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEec----------------CCCcEEEEEcCCCceeeEec
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGS----------------YDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~v~iwd~~~~~~~~~~~  403 (454)
                      |+.++.........          . .. +.|+| +|++|++++                .++.|++||+.++... .+.
T Consensus       270 d~~~g~~~~l~~~~----------~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~  336 (396)
T 3c5m_A          270 NPETLENEEVMVMP----------P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLC  336 (396)
T ss_dssp             CTTTCCEEEEEECC----------S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEE
T ss_pred             ECCCCCeEEeeeCC----------C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-Ecc
Confidence            99887654332211          1 33 88999 999888754                3478999999877543 333


Q ss_pred             cCCCce-----------eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        404 DIPLSG-----------VINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       404 ~~~~~~-----------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .  +..           .+..++|+|||+.|+.++..++...+|...
T Consensus       337 ~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~  381 (396)
T 3c5m_A          337 K--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD  381 (396)
T ss_dssp             E--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred             C--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence            2  222           256789999999998886667777777654

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.85  E-value=1.5e-19  Score=166.58  Aligned_cols=244  Identities=8%  Similarity=0.034  Sum_probs=163.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceecccCCcccCCCCCCceEEEEEeCCCcE--EEEec--------
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLE-TRSKVCSSPFVKTDRKSYPPILALAVANNNEL--VASGD--------  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~--------  209 (454)
                      +...+..++|+|++++|++++.+ .|.+|++. ++.........    .+ +.+.+++|+|+|++  +++++        
T Consensus        38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~----~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~  111 (365)
T 1jof_A           38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP----IG-GHPRANDADTNTRAIFLLAAKQPPYAVYA  111 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE----CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred             CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee----cC-CCCccEEECCCCCEEEEEEecCCcceecc
Confidence            44568899999999999999887 99999997 66543221110    01 12456889999994  55553        


Q ss_pred             -----CCCcEEEEeCC--CccEEeec----ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC-CceeE--EEee--cc
Q psy17902        210 -----NNSNIKLWSSS--LEHLHTFT----GHKAPITGLAISFECDTLYSSSN-DRSIKVWNIE-DRAYV--ETLF--GH  272 (454)
Q Consensus       210 -----~dg~v~vw~~~--~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~--~~~~--~~  272 (454)
                           .+|.+.+|++.  +.....+.    .+...+.+++|+|+|++|++++. ++.|++|++. +++..  ..+.  .|
T Consensus       112 ~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~  191 (365)
T 1jof_A          112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP  191 (365)
T ss_dssp             EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred             ceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence                 68999999983  44433332    25567999999999998887764 6799999998 67543  2333  24


Q ss_pred             CCceeEEEeecCCCEEEEeeC-CCcEEEeecc--CCeEE----EEc-------cccC------CeEEE--EecCCCEEEE
Q psy17902        273 QSAITSLDILAKNRVISSGGT-DKSVRVWKIQ--EESQL----VFN-------GHSR------GIDMT--RRVNDQQFIT  330 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~----~~~-------~~~~------~i~~~--~~~~~~~l~~  330 (454)
                      ...+..++|+|+|++|++++. ++.|.+|++.  ++...    .+.       ++..      .+..+  +.+++++|++
T Consensus       192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v  271 (365)
T 1jof_A          192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA  271 (365)
T ss_dssp             TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred             CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence            567899999999998887764 6899999875  44432    111       1121      24444  4456667776


Q ss_pred             EeCC-C-----CEEEEecC-CCccceeeecccCCCCCCCCCCcEEEEEEec---CCCEEEEecCC-CcEEEEEcCCC
Q psy17902        331 CGED-G-----TLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVACLH---NSDLVASGSYD-GCVKLWKITPK  396 (454)
Q Consensus       331 ~~~d-g-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~d-g~v~iwd~~~~  396 (454)
                      +..+ +     .|.+|++. ++...........      +...+..++|+|   +|++|++++.+ +.|.+|++...
T Consensus       272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~  342 (365)
T 1jof_A          272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT------PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC------SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec------CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence            6532 2     79999996 4543321110100      011145688999   89999988764 89999999765

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.85  E-value=4.4e-18  Score=151.23  Aligned_cols=245  Identities=10%  Similarity=0.088  Sum_probs=176.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe-CCCcEEEEecC-CCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA-NNNELVASGDN-NSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~-dg~v~vw~  218 (454)
                      |-..+.+++++++++++++...++.|.+||.. +.....+........+...+..+++. +++.++++... ++.|.+|+
T Consensus        28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d  106 (286)
T 1q7f_A           28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN  106 (286)
T ss_dssp             CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence            56779999999999988888889999999987 44444333211112344578999994 67776666643 78999999


Q ss_pred             CCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCC
Q psy17902        219 SSLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       219 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                      .++..+..+. .+...+.+++++++++++++...++.|.+||.. +..+..+.  .+...+.+|+++++++++++...++
T Consensus       107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~  185 (286)
T 1q7f_A          107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH  185 (286)
T ss_dssp             TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred             CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence            8777776664 344678999999999887777778999999965 55555553  3445689999999999888878899


Q ss_pred             cEEEeeccCCeEEEEccc--cCCeEEEEe-cCCCEEEEEeCCC-CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        296 SVRVWKIQEESQLVFNGH--SRGIDMTRR-VNDQQFITCGEDG-TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~--~~~i~~~~~-~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      .|++||........+...  ......+.+ +++..+++...++ .|.+|+. .+..+..+....       ....+.+++
T Consensus       186 ~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-------~~~~~~~i~  257 (286)
T 1q7f_A          186 CVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-------KHAQCFDVA  257 (286)
T ss_dssp             EEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-------CCSCEEEEE
T ss_pred             EEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-------CCCcceeEE
Confidence            999999865443344333  234445555 4566666666665 9999995 455555554322       122378999


Q ss_pred             EecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        372 CLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ++|+|+++++ +.+++|++|++...
T Consensus       258 ~~~~g~l~vs-~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          258 LMDDGSVVLA-SKDYRLYIYRYVQL  281 (286)
T ss_dssp             EETTTEEEEE-ETTTEEEEEECSCC
T ss_pred             ECCCCcEEEE-CCCCeEEEEEcccc
Confidence            9999987777 56899999998654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.85  E-value=5.3e-18  Score=153.81  Aligned_cols=243  Identities=10%  Similarity=0.052  Sum_probs=181.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC------------------------CeEEEEEcCCCceecccCCcccCCCCCCceEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD------------------------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILAL  196 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~  196 (454)
                      --+.|.+++++|+|+++++...+                        +.|.+||..++........     .+...+..+
T Consensus        22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-----~~~~~p~gi   96 (329)
T 3fvz_A           22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-----NLFYLPHGL   96 (329)
T ss_dssp             CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-----TTCSSEEEE
T ss_pred             ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-----CccCCceEE
Confidence            34569999999999999888777                        4799999988776544321     344578999


Q ss_pred             EEeCCCcEEEEecCCCcEEEEeCCCc--cEEee---------cccCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEeCCCc
Q psy17902        197 AVANNNELVASGDNNSNIKLWSSSLE--HLHTF---------TGHKAPITGLAISF-ECDTLYSSS-NDRSIKVWNIEDR  263 (454)
Q Consensus       197 ~~~~~~~~l~~~~~dg~v~vw~~~~~--~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~  263 (454)
                      +++++|+++++...++.|++|+..+.  .+..+         ..+......++++| ++.++++.+ .++.|++|+ .++
T Consensus        97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g  175 (329)
T 3fvz_A           97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG  175 (329)
T ss_dssp             EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred             EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence            99999998888888999999999665  45555         34455789999999 777777776 689999999 456


Q ss_pred             eeEEEeec----------cCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EE--ccccCCeEEEEecCCCEEE
Q psy17902        264 AYVETLFG----------HQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VF--NGHSRGIDMTRRVNDQQFI  329 (454)
Q Consensus       264 ~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~--~~~~~~i~~~~~~~~~~l~  329 (454)
                      ..+..+..          +-....+|+++|+ +.++++...++.|++|+..+++.+ .+  ..+...+..+.+.++..+.
T Consensus       176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~  255 (329)
T 3fvz_A          176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFA  255 (329)
T ss_dssp             CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEE
T ss_pred             CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEE
Confidence            66666532          2234789999998 777777788899999999877766 33  2233445555555532222


Q ss_pred             E-------EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        330 T-------CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       330 ~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      +       ...+..|++|++.+++.+..+....      .+...+..++++|+|.++++...++.|++|++..
T Consensus       256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~------~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR------KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EECCCCTTCSCCCCEEEEETTTCCEEEEECCSS------SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred             eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC------CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence            2       2345589999999998887764221      1344589999999998888888999999999864

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.84  E-value=5.8e-18  Score=154.89  Aligned_cols=259  Identities=10%  Similarity=0.006  Sum_probs=176.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-
Q psy17902        142 RASITCIAVTSDSKHVYSAC---------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-  211 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  211 (454)
                      ...+..+++  +|++|+...         .++.|.+|++.++.....           ..+..++|+|+|++|+.++.+ 
T Consensus        14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----------~~~~~~~~SpDg~~la~~~~~~   80 (347)
T 2gop_A           14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----------ENATMPRISPDGKKIAFMRANE   80 (347)
T ss_dssp             SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----------ESCEEEEECTTSSEEEEEEEET
T ss_pred             eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----------ccCCCeEECCCCCEEEEEEecc
Confidence            344777888  888887653         257899999988754321           257889999999999887653 


Q ss_pred             --C--cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEeC
Q psy17902        212 --S--NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND---------------------------RSIKVWNI  260 (454)
Q Consensus       212 --g--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~  260 (454)
                        +  .|.+|++.+.....+..+.. +..++|+|+++.|+.++.+                           ..|++||+
T Consensus        81 ~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~  159 (347)
T 2gop_A           81 EKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT  159 (347)
T ss_dssp             TTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred             CCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence              3  47778885555444444444 9999999999988887642                           57999999


Q ss_pred             CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC-------cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC
Q psy17902        261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK-------SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE  333 (454)
Q Consensus       261 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~  333 (454)
                      .+++.+..+.. . .+..+.|+|++ +++++..++       ...||.+.++....+..+ ..+... .+++..|+.++.
T Consensus       160 ~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~-spdg~~l~~~~~  234 (347)
T 2gop_A          160 ESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV-DSDGERILLYGK  234 (347)
T ss_dssp             TTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE-EECSSCEEEEEC
T ss_pred             CCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE-CCCCCEEEEEEc
Confidence            98876445544 3 78899999999 877776542       344554445555444444 444444 677888877764


Q ss_pred             C--------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEE-EEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        334 D--------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS-VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       334 d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      +        ..|.+||  ++... .+..        .+...+.. +.|+ ++ ++++++.++.++|| +.++.... +..
T Consensus       235 ~~~~~~~~~~~l~~~d--~~~~~-~l~~--------~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~  299 (347)
T 2gop_A          235 PEKKYMSEHNKLYIYD--GKEVM-GILD--------EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAK  299 (347)
T ss_dssp             CSSSCCCSSCEEEEEC--SSCEE-ESST--------TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EEC
T ss_pred             cccCCccccceEEEEC--CCceE-eccc--------cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-Eec
Confidence            4        3577777  43322 2211        12344775 8999 88 99999999999999 88655433 332


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCce-eeeeee
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRF-GRWKTI  439 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i-~~W~~~  439 (454)
                        +.+.|.+++|+|  ..++++ +.++.. .+|...
T Consensus       300 --~~~~v~~~~~s~--~~~~~~-~~~~~~~~l~~~~  330 (347)
T 2gop_A          300 --GRHWIMGFDVDE--IVVYLK-ETATRLRELFTWD  330 (347)
T ss_dssp             --SSSEEEEEEESS--SEEEEE-ECSSSCCEEEEES
T ss_pred             --CCCeEEeeeeeC--cEEEEE-cCCCChHHheEeC
Confidence              467899999999  566666 444443 667654

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.83  E-value=1.5e-18  Score=159.24  Aligned_cols=271  Identities=8%  Similarity=0.030  Sum_probs=185.9

Q ss_pred             CCCEEEEEe------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----------CCcEEE
Q psy17902        153 DSKHVYSAC------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----------NSNIKL  216 (454)
Q Consensus       153 ~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~v~v  216 (454)
                      +++++++..      .|+.|.+||..+++....++.      +..+  .++|+|++++|++++.          ++.|.+
T Consensus        14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~------g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v   85 (361)
T 2oiz_A           14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT------AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV   85 (361)
T ss_dssp             GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC------CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred             CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC------CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence            556666654      367999999998887765542      3333  8999999999998862          567999


Q ss_pred             EeC-CCccEEeeccc------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEE-eeccCCceeEEEeecCC-
Q psy17902        217 WSS-SLEHLHTFTGH------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKN-  285 (454)
Q Consensus       217 w~~-~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-  285 (454)
                      ||. +.+.+..+...      ......++|+|+|++|+++..  ++.|.+||+.+++.+.. +. +.. ...+.+.|++ 
T Consensus        86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~  163 (361)
T 2oiz_A           86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRP  163 (361)
T ss_dssp             EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSS
T ss_pred             EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCC
Confidence            999 55666665432      345678999999999998874  58999999999988877 53 222 2335567766 


Q ss_pred             CEEEEeeCCCcEEEeeccC-CeEE-E------EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc--eeeeccc
Q psy17902        286 RVISSGGTDKSVRVWKIQE-ESQL-V------FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT--HTIPVAH  355 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~-~~~~-~------~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~  355 (454)
                      ..+++.+.||.+.+|++.. ++.. .      +.....++.....+++..++..+.++.|.++|+......  ..+....
T Consensus       164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~  243 (361)
T 2oiz_A          164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN  243 (361)
T ss_dssp             SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred             eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence            6778888999999999865 4433 1      111112222222344566777778899999998654322  1111100


Q ss_pred             ---CCCCCCCCCCcEEEEEEecCCCEEEEecC-----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        356 ---GYDSSSSEPNWITSVACLHNSDLVASGSY-----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       356 ---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                         .....  .+.....++|+|+++.++++..           .+.|.+||+.+++.+..+..  +.  +.+++|+|||+
T Consensus       244 ~~~~~~~~--~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~--p~~ia~spdg~  317 (361)
T 2oiz_A          244 DEDKAKNW--VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD--ALSMTIDQQRN  317 (361)
T ss_dssp             HHHHHTTC--EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT--CCEEEEETTTT
T ss_pred             cccccccc--ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC--eeEEEECCCCC
Confidence               00000  0000122789999887776543           34799999999998888875  33  99999999999


Q ss_pred             EEEEEecCCCceeeeeeeCC
Q psy17902        422 HLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       422 ~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +|+++ +. +.|.+||..++
T Consensus       318 ~l~v~-n~-~~v~v~D~~t~  335 (361)
T 2oiz_A          318 LMLTL-DG-GNVNVYDISQP  335 (361)
T ss_dssp             EEEEE-CS-SCEEEEECSSS
T ss_pred             EEEEe-CC-CeEEEEECCCC
Confidence            99988 45 99999998766

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.83  E-value=2.6e-18  Score=157.58  Aligned_cols=267  Identities=8%  Similarity=0.034  Sum_probs=185.5

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACK----------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE  203 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  203 (454)
                      ..+..  +..+  .++|+|++++|++++.          ++.|.+||+.+.+....+........+......++|+|+|+
T Consensus        45 ~~i~~--g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~  120 (361)
T 2oiz_A           45 GMVPT--AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK  120 (361)
T ss_dssp             EEEEC--CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS
T ss_pred             EEecC--CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC
Confidence            34444  5444  8999999999999863          57899999998887766543211111234567899999999


Q ss_pred             EEEEecC--CCcEEEEeC-CCccEEe-ecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-ceeEEE------eec
Q psy17902        204 LVASGDN--NSNIKLWSS-SLEHLHT-FTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIED-RAYVET------LFG  271 (454)
Q Consensus       204 ~l~~~~~--dg~v~vw~~-~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~------~~~  271 (454)
                      +|+++..  ++.|.+||+ +.+.+.. +. +.+ ...+.+.|++ ..+++.+.||.+.+|++.. ++....      +..
T Consensus       121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~  198 (361)
T 2oiz_A          121 FIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV  198 (361)
T ss_dssp             EEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT
T ss_pred             EEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC
Confidence            9998864  579999999 5555555 33 222 2335667765 6788889999999999865 444311      122


Q ss_pred             cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc-----c----c----cCC-eEEEEecCCCEEEEEeC----
Q psy17902        272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-----G----H----SRG-IDMTRRVNDQQFITCGE----  333 (454)
Q Consensus       272 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~----~----~~~-i~~~~~~~~~~l~~~~~----  333 (454)
                      ...++ .+.+++++..++..+.++.|.++|+.........     .    .    ... -.....++++.++++..    
T Consensus       199 ~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~  277 (361)
T 2oiz_A          199 KDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGK  277 (361)
T ss_dssp             TTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCC
T ss_pred             CCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCC
Confidence            22222 3344677777777778899999999765432111     0    0    011 11344556676665543    


Q ss_pred             -------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC--ceeeEecc
Q psy17902        334 -------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK--RTLEFLQD  404 (454)
Q Consensus       334 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~  404 (454)
                             .+.|.+||+.+.+.+.+++...           +.+++|+|+|++|++++. ++|.+||..++  +.+..+..
T Consensus       278 ~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----------p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~  345 (361)
T 2oiz_A          278 EGTHKFPAAEIWVMDTKTKQRVARIPGRD-----------ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEG  345 (361)
T ss_dssp             TTCTTCCCSEEEEEETTTTEEEEEEECTT-----------CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETT
T ss_pred             cccccCCCceEEEEECCCCcEEEEEecCC-----------eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEecc
Confidence                   3479999999999998887532           678999999999998887 99999999999  88877643


Q ss_pred             CCCceeeeEEEEcCCCC
Q psy17902        405 IPLSGVINSLVFTSDHK  421 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~  421 (454)
                        .......++|+|+|+
T Consensus       346 --~G~~P~~~~~~p~G~  360 (361)
T 2oiz_A          346 --AAEASLQVQFHPVGG  360 (361)
T ss_dssp             --SCSSEEEEEECCCSC
T ss_pred             --CCCCcEEEEecCCCC
Confidence              566678899999986

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.83  E-value=2.6e-18  Score=171.40  Aligned_cols=292  Identities=9%  Similarity=0.001  Sum_probs=189.8

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEE--eCCCeEEEEEcCCCceecccCCcccCCCCCCceE---------EEEEe--
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSA--CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIL---------ALAVA--  199 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--  199 (454)
                      ...+.+  |...|..++|++++-++++.  +.++...||....+.....+.      .+...+.         ...|+  
T Consensus        16 ~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~S   87 (662)
T 3azo_A           16 AALVAS--RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESAL------PAPWNVRNRVFEYSGFPWAGVPR   87 (662)
T ss_dssp             HHHHHH--TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESS------CTTCCBCCCGGGTCCCCEEEECC
T ss_pred             HHHHhh--cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeC------CCCccccccccccCCccceeeee
Confidence            345667  99999999999876666666  457899999864333333322      1222333         45555  


Q ss_pred             CCCcE-EEEecC-CCcEEEEeCC--C-ccEEeecc-----cCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEe
Q psy17902        200 NNNEL-VASGDN-NSNIKLWSSS--L-EHLHTFTG-----HKAPITGLAISFECDTLYSSSND----------RSIKVWN  259 (454)
Q Consensus       200 ~~~~~-l~~~~~-dg~v~vw~~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd  259 (454)
                      |||+. |+.++. +..|.++++.  + .....+..     |...+.+++|+|||+.|++++.+          ..|++||
T Consensus        88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~  167 (662)
T 3azo_A           88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP  167 (662)
T ss_dssp             SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred             cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence            99988 776654 5677777776  4 55566655     67788999999999999998876          5899999


Q ss_pred             CCC------ceeEEEee-ccCCceeEEEeecCCCEEEEeeCC--------CcEEEeecc-CC---eEEEEc-cccCCeEE
Q psy17902        260 IED------RAYVETLF-GHQSAITSLDILAKNRVISSGGTD--------KSVRVWKIQ-EE---SQLVFN-GHSRGIDM  319 (454)
Q Consensus       260 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~-~~~~~i~~  319 (454)
                      +.+      +.. ..+. .+...+..++|+|||++|+.++.+        ..|++||+. ++   ....+. .+...+..
T Consensus       168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~  246 (662)
T 3azo_A          168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ  246 (662)
T ss_dssp             TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred             CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence            988      554 3444 556788899999999999877755        379999998 56   444333 33456655


Q ss_pred             EEec-CCCEEEEEeCCC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc--C
Q psy17902        320 TRRV-NDQQFITCGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI--T  394 (454)
Q Consensus       320 ~~~~-~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~--~  394 (454)
                      ..|. ++.+++++..++  .|.+||+.++............. ...-...+..++|+|++.++++++. +.++||.+  .
T Consensus       247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~  324 (662)
T 3azo_A          247 AEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFA-GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPE  324 (662)
T ss_dssp             EEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS-CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred             eEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccccc-CccccccCceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence            5554 566666777777  56666665554433222111110 0000011456899999999999998 99999944  4


Q ss_pred             CCceeeEeccCCCceeeeEEEEcCCCCEE-EEEecCCCceeeeeee
Q psy17902        395 PKRTLEFLQDIPLSGVINSLVFTSDHKHL-VAGIGTEHRFGRWKTI  439 (454)
Q Consensus       395 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l-~~~~~~d~~i~~W~~~  439 (454)
                      ++. +..+..  +.+.+..+. ++++..+ +++.+.+....+|...
T Consensus       325 ~~~-~~~l~~--~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d  366 (662)
T 3azo_A          325 SGE-LVDAAG--PWTEWAATL-TVSGTRAVGVAASPRTAYEVVELD  366 (662)
T ss_dssp             TTE-EEECCS--SCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEE
T ss_pred             CCc-EEEecC--CCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEE
Confidence            444 555654  556677661 4445444 3443555555555443

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.83  E-value=4.5e-18  Score=154.69  Aligned_cols=274  Identities=9%  Similarity=-0.031  Sum_probs=186.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      ...|.+++|++++..++..+.++.++.|.   ......+.      .+...+.+++|++++++++++..++.|.+|+..+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~   75 (333)
T 2dg1_A            5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEIS------KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET   75 (333)
T ss_dssp             -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEE------SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred             ccccceeeecCCccceeEEeecccCcccc---cceeEEEe------ccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence            34578889999888887778888999993   22222222      2445678999999999888888899999999955


Q ss_pred             ccEEee-cccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeC-
Q psy17902        222 EHLHTF-TGHKAPITGLAISFECDTLYSSSND----RSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGT-  293 (454)
Q Consensus       222 ~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-  293 (454)
                      ..+..+ ..+...+.+++++++++++++...+    +.|.+||..++.....+.  .+...+.+++++|+++++++... 
T Consensus        76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~  155 (333)
T 2dg1_A           76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG  155 (333)
T ss_dssp             CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred             CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence            444433 3567789999999999877777666    689999998776543332  24457899999999988776653 


Q ss_pred             -----CCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCC-Cccceeee--cccCCCCCCCC
Q psy17902        294 -----DKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILK-KVPTHTIP--VAHGYDSSSSE  363 (454)
Q Consensus       294 -----dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~--~~~~~~~~~~~  363 (454)
                           .+.|..|+..++....+.........+.+. ++..++ +.+.++.|.+|++.. +..+..+.  ......   . 
T Consensus       156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~---~-  231 (333)
T 2dg1_A          156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT---G-  231 (333)
T ss_dssp             BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC---S-
T ss_pred             cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC---C-
Confidence                 356777776655554333333334455554 555554 445678999999964 33322211  000000   0 


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC----ceeeeEEEEcCCCCEEEEEecC
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL----SGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      ...+..++++++|+++++...++.|.+|+. .++.+..+.....    ...+.+++|+||+..|++++..
T Consensus       232 ~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          232 HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             SSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             CCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            124788999999998888877889999998 4666666543111    1168899999999888776443

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.82  E-value=1.9e-17  Score=166.11  Aligned_cols=245  Identities=10%  Similarity=0.015  Sum_probs=173.5

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCC-----cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc---------
Q psy17902        189 SYPPILALAVANNNELVASGDNNS-----NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS---------  254 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg-----~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---------  254 (454)
                      +...+..++|||||++||.+..++     .|++||+.+............+.+++|+|||+.|+.++.++.         
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~  202 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET  202 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence            444688999999999998776543     899999954443332222233678999999999999988766         


Q ss_pred             -------EEEEeCCCcee--EEEee--ccCCceeEEEeecCCCEEEEeeC-----CCcEEEeeccC------C--eEEEE
Q psy17902        255 -------IKVWNIEDRAY--VETLF--GHQSAITSLDILAKNRVISSGGT-----DKSVRVWKIQE------E--SQLVF  310 (454)
Q Consensus       255 -------i~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~--~~~~~  310 (454)
                             |++|++.++..  ...+.  .|...+.++.|+|+|++|+.++.     +..|++||+.+      +  ....+
T Consensus       203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l  282 (710)
T 2xdw_A          203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL  282 (710)
T ss_dssp             CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred             ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence                   99999988752  22222  34556789999999998887764     56899999986      4  34455


Q ss_pred             ccccCCeEEEEecCCCEEEEEeCC----CCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        311 NGHSRGIDMTRRVNDQQFITCGED----GTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       311 ~~~~~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      ..+...+...+.++++.|+..+..    +.|.+||+.++..  ...+.....       ...+..++|++++.++++...
T Consensus       283 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~lv~~~~~  355 (710)
T 2xdw_A          283 IDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-------KDVLEWVACVRSNFLVLCYLH  355 (710)
T ss_dssp             ECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-------SCEEEEEEEETTTEEEEEEEE
T ss_pred             eCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-------CCeEEEEEEEcCCEEEEEEEE
Confidence            555555666677778877766643    3599999987642  233322111       124888999988888888888


Q ss_pred             CCc--EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---CCCceeeeeeeCCC
Q psy17902        385 DGC--VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG---TEHRFGRWKTIKGV  442 (454)
Q Consensus       385 dg~--v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~---~d~~i~~W~~~~~~  442 (454)
                      ++.  |.+|++.+++.+..+..  +.+.+..++++|++..|+.+.+   ..+.|.+|+..++.
T Consensus       356 ~g~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          356 DVKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             TTEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             CCEEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            885  56667767776677765  4677899999999987765433   35788888876554

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.82  E-value=2.6e-17  Score=146.26  Aligned_cols=242  Identities=12%  Similarity=0.136  Sum_probs=173.0

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec------ccCCCeEEEEEc-CCCCEEEEEeC-CCcEEEEe
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT------GHKAPITGLAIS-FECDTLYSSSN-DRSIKVWN  259 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~iwd  259 (454)
                      ++...+.++++++++.++++...++.|.+|+..+..+..+.      .+...+.++++. +++.++++... ++.|.+||
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d  106 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN  106 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence            45567899999999998888888899999999877666653      244678999994 66655555533 78999999


Q ss_pred             CCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEecC-CCEEEEEeCCC
Q psy17902        260 IEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRVN-DQQFITCGEDG  335 (454)
Q Consensus       260 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~-~~~l~~~~~dg  335 (454)
                       .+++.+..+. .+...+.+++++++++++++...++.|.+||........+.  .+......+.+.+ +..+++.+.++
T Consensus       107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~  185 (286)
T 1q7f_A          107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH  185 (286)
T ss_dssp             -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred             -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence             5566666553 24457899999999998888778899999997644333332  2333455565554 45555556789


Q ss_pred             CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-cEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902        336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-CVKLWKITPKRTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~l  414 (454)
                      .|++||.. +..+..+....       +...+..++++++|+++++...++ .|.+|+. .++.+..+........+.++
T Consensus       186 ~i~~~~~~-g~~~~~~~~~g-------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i  256 (286)
T 1q7f_A          186 CVKVFNYE-GQYLRQIGGEG-------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV  256 (286)
T ss_dssp             EEEEEETT-CCEEEEESCTT-------TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred             EEEEEcCC-CCEEEEEccCC-------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence            99999974 44444443211       123489999999999888888776 9999995 45666666543233347899


Q ss_pred             EEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        415 VFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       415 ~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +|+|+|+.+++  +.+++|.+|+....
T Consensus       257 ~~~~~g~l~vs--~~~~~v~v~~~~~~  281 (286)
T 1q7f_A          257 ALMDDGSVVLA--SKDYRLYIYRYVQL  281 (286)
T ss_dssp             EEETTTEEEEE--ETTTEEEEEECSCC
T ss_pred             EECCCCcEEEE--CCCCeEEEEEcccc
Confidence            99999975555  36899999987543

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.82  E-value=1.3e-18  Score=159.16  Aligned_cols=245  Identities=10%  Similarity=0.067  Sum_probs=159.4

Q ss_pred             CeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----------
Q psy17902        144 SITCIAVTSDSKHVYS-ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----------  211 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------  211 (454)
                      .+..++|+|+++++++ +..++.|.+||+.+++....+............+.+++|+|+|++|++++.+           
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~  123 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK  123 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence            5789999999987654 4568999999999887665543210000002237789999999999998865           


Q ss_pred             -CcEEEEeCCC-c---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC------------
Q psy17902        212 -SNIKLWSSSL-E---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS------------  274 (454)
Q Consensus       212 -g~v~vw~~~~-~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------  274 (454)
                       +.|.+||+.. .   .+..+. +...+.+++|+|+++ +++++  +.|.+||+.+++.+..+..+..            
T Consensus       124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (349)
T 1jmx_B          124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY  199 (349)
T ss_dssp             CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred             CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence             8999999833 2   223333 344688999999999 66654  4499999999987776643320            


Q ss_pred             ------------ceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEE--EEccccCCeEEEE-ec-CCCEEEEEeCCCCE
Q psy17902        275 ------------AITSLDILAKNRVISSGG-TDKSVRVWKIQEESQL--VFNGHSRGIDMTR-RV-NDQQFITCGEDGTL  337 (454)
Q Consensus       275 ------------~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~-~~-~~~~l~~~~~dg~i  337 (454)
                                  ...++++++++....... ....+..++..++...  ....+......+. .+ ++.+++++  ++.|
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v  277 (349)
T 1jmx_B          200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL  277 (349)
T ss_dssp             CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred             eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence                        234456655432110000 0011122444443322  1112233334444 45 56677766  8899


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      .+||+.+++.+..+....          .+.+++|+|++++|++++.++.|.+||+.+++.+..+..
T Consensus       278 ~~~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~  334 (349)
T 1jmx_B          278 AKYDLKQRKLIKAANLDH----------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL  334 (349)
T ss_dssp             EEEETTTTEEEEEEECSS----------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred             EEEECccCeEEEEEcCCC----------CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence            999999988877776422          167899999999888888899999999999887777654

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.81  E-value=4.7e-17  Score=147.54  Aligned_cols=243  Identities=12%  Similarity=0.067  Sum_probs=174.3

Q ss_pred             CCCceEEEEEeCCCcEEEEecCC------------------------CcEEEEeC-CCccEEeec-ccCCCeEEEEEcCC
Q psy17902        189 SYPPILALAVANNNELVASGDNN------------------------SNIKLWSS-SLEHLHTFT-GHKAPITGLAISFE  242 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~d------------------------g~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~~  242 (454)
                      ....+.+++++++|+++++...+                        +.|.+||. ++..+..+. .+-..+..++++++
T Consensus        22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~  101 (329)
T 3fvz_A           22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD  101 (329)
T ss_dssp             CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred             ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence            34579999999999999888777                        47999999 466555443 34467899999999


Q ss_pred             CCEEEEEeCCCcEEEEeCCCce-eEEEe---------eccCCceeEEEeec-CCCEEEEee-CCCcEEEeeccCCeEE-E
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDRA-YVETL---------FGHQSAITSLDILA-KNRVISSGG-TDKSVRVWKIQEESQL-V  309 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~-~  309 (454)
                      ++++++...++.|++||..... .+..+         ..+......|+++| ++.++++.+ .++.|++|+.. +..+ .
T Consensus       102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~  180 (329)
T 3fvz_A          102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQ  180 (329)
T ss_dssp             SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEE
T ss_pred             CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEE
Confidence            9988888889999999986542 34444         23444688999999 788888776 68999999954 4444 3


Q ss_pred             Eccc----------cCCeEEEEec-C-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec---
Q psy17902        310 FNGH----------SRGIDMTRRV-N-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH---  374 (454)
Q Consensus       310 ~~~~----------~~~i~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---  374 (454)
                      +...          ......+.+. + +..+++...++.|++|+..+++.+..+....       +...+..++|+|   
T Consensus       181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-------~~~~~~~~~~~pg~~  253 (329)
T 3fvz_A          181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-------FGRNVFAISYIPGFL  253 (329)
T ss_dssp             ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-------TTTCEEEEEEETTEE
T ss_pred             eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-------cCCCcceeeecCCEE
Confidence            3221          1224445544 4 4556666688999999998888777764321       233488899999   


Q ss_pred             ---CCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        375 ---NSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       375 ---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                         +|+..++...+..|++|++.+++.+..+.. ..+...+.+|+++|+| .|+++...+++|++|+...
T Consensus       254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~  322 (329)
T 3fvz_A          254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE  322 (329)
T ss_dssp             EEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred             EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence               333333334456899999999988887742 1245668999999999 4555547889999998754

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.80  E-value=2.2e-17  Score=165.21  Aligned_cols=280  Identities=10%  Similarity=-0.010  Sum_probs=184.3

Q ss_pred             CCCCEEEEEeCCC-----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-----ecCCCcEEEEeCCC
Q psy17902        152 SDSKHVYSACKDG-----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-----GDNNSNIKLWSSSL  221 (454)
Q Consensus       152 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----~~~dg~v~vw~~~~  221 (454)
                      |+|.+++....++     .|.+.+...+.....+.......+|...+..++|||||++||.     |+.+..|++||+.+
T Consensus        77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t  156 (695)
T 2bkl_A           77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS  156 (695)
T ss_dssp             EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence            6777777665543     2344444333322222111111234557899999999999984     44457899999944


Q ss_pred             ccEEeecccCCCe--EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCce----eEEEeeccCCceeEEEee
Q psy17902        222 EHLHTFTGHKAPI--TGLAISFECDTLYSSSNDRS-------------IKVWNIEDRA----YVETLFGHQSAITSLDIL  282 (454)
Q Consensus       222 ~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~~~~~v~~~~~~  282 (454)
                      ..... ..+...+  ..++|+|||+.|+.++.+..             |++|++.++.    .+.....|...+.++.|+
T Consensus       157 g~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S  235 (695)
T 2bkl_A          157 GEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS  235 (695)
T ss_dssp             CCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred             CCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence            33320 1121222  67899999999999998776             9999998875    333333455678899999


Q ss_pred             cCCCEEEEeeCCC----cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC----CCCEEEEecCCCcc--ceeee
Q psy17902        283 AKNRVISSGGTDK----SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE----DGTLSLWSILKKVP--THTIP  352 (454)
Q Consensus       283 ~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~  352 (454)
                      |+|++|+.++.++    .|++|+..++....+..+........++++. |+..+.    ++.|.+||+.++..  ...+.
T Consensus       236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~  314 (695)
T 2bkl_A          236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV  314 (695)
T ss_dssp             TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred             CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence            9999888877666    6777877665555555555555555556666 555453    57899999977653  22222


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG---  428 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~---  428 (454)
                      ...       ....+..++|+ ++.++++...|+..+||.+. .+.....+.. +..+.+..++++|++..|+.+.+   
T Consensus       315 ~~~-------~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~  385 (695)
T 2bkl_A          315 PED-------SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL-PGVGAASNLMGLEDLDDAYYVFTSFT  385 (695)
T ss_dssp             CCC-------SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-SSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred             cCC-------CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-CCCeEEEEeecCCCCCEEEEEEcCCC
Confidence            111       12337888888 67788899999998888765 3555555543 23667888999999988775533   


Q ss_pred             CCCceeeeeeeCCC
Q psy17902        429 TEHRFGRWKTIKGV  442 (454)
Q Consensus       429 ~d~~i~~W~~~~~~  442 (454)
                      ..+.|++|+..++.
T Consensus       386 ~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          386 TPRQIYKTSVSTGK  399 (695)
T ss_dssp             EEEEEEEEETTTCC
T ss_pred             CCCEEEEEECCCCc
Confidence            35778999876654

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.80  E-value=1e-17  Score=155.66  Aligned_cols=239  Identities=9%  Similarity=-0.007  Sum_probs=159.3

Q ss_pred             EEEeCCCcEEEEecC-CC--cEEEEeCCC-ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec
Q psy17902        196 LAVANNNELVASGDN-NS--NIKLWSSSL-EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG  271 (454)
Q Consensus       196 ~~~~~~~~~l~~~~~-dg--~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  271 (454)
                      .+|+|||++|++++. +|  .|.+||+.+ ........+...+..+.|+|+++.|+.++.++.|++||+.+++....+..
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~  120 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV  120 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence            789999999998887 66  488888844 44444455555555778999999999999999999999999987766666


Q ss_pred             cCCceeEEE--eecCCCEEEEe----------------------eCCCcEEEeeccCCeEEEEccccCCeEEEEecC--C
Q psy17902        272 HQSAITSLD--ILAKNRVISSG----------------------GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN--D  325 (454)
Q Consensus       272 ~~~~v~~~~--~~~~~~~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~--~  325 (454)
                      +...+....  ++|++.+++..                      ..+..|++||+.++....+..+...+....+++  +
T Consensus       121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg  200 (388)
T 3pe7_A          121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD  200 (388)
T ss_dssp             CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred             hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC
Confidence            666554444  47899888742                      234689999999988776666666666555554  5


Q ss_pred             CEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CC----cEEEEEcC
Q psy17902        326 QQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DG----CVKLWKIT  394 (454)
Q Consensus       326 ~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg----~v~iwd~~  394 (454)
                      ..|+.++.+      ..|.++|+..+... .+....       ....+..+.|+|+|+.|+..+. ++    .|++||+.
T Consensus       201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  272 (388)
T 3pe7_A          201 STVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHA-------EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE  272 (388)
T ss_dssp             EEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCC-------TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred             CEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCC-------CCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence            667666643      37888887654332 221111       1123778999999997655433 22    39999999


Q ss_pred             CCceeeEeccCCCce---eeeEEEEcCCCCEEEEEe--------cCCCceeeeeeeCCC
Q psy17902        395 PKRTLEFLQDIPLSG---VINSLVFTSDHKHLVAGI--------GTEHRFGRWKTIKGV  442 (454)
Q Consensus       395 ~~~~~~~~~~~~~~~---~v~~l~~s~d~~~l~~~~--------~~d~~i~~W~~~~~~  442 (454)
                      +++.........+..   ....++|+|||+.|+...        +.+..|++|+...+.
T Consensus       273 ~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (388)
T 3pe7_A          273 TLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT  331 (388)
T ss_dssp             TCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred             CCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence            886432222111111   122347999999988653        446689999876654

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.79  E-value=7.2e-15  Score=131.12  Aligned_cols=277  Identities=12%  Similarity=0.040  Sum_probs=192.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      +...+.+++++++|+++++...++.|.+||.. +.... +...    .....+.++++.+++.++++...++.|..|+..
T Consensus        13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~   86 (299)
T 2z2n_A           13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLP----TPDAKVMCLTISSDGEVWFTENAANKIGRITKK   86 (299)
T ss_dssp             SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECS----STTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCC----cccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence            66789999999999987776668899999988 44322 1110    134578999999999988887778899999986


Q ss_pred             CccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        221 LEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       221 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                      +.. ..+  ......+.++++.+++.++++...++.|.+||. ++..... ...+...+.++++.++++++++...++.|
T Consensus        87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i  164 (299)
T 2z2n_A           87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI  164 (299)
T ss_dssp             SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred             CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence            432 222  234567899999999987777777889999998 5544322 22345668999999999888877677899


Q ss_pred             EEeeccCCeEEEE--ccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        298 RVWKIQEESQLVF--NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       298 ~i~d~~~~~~~~~--~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      ..||. ++....+  ......+..+.+. ++..+++...++.|.+||. ++... .+....       ....+.++++++
T Consensus       165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-------~~~~~~~i~~~~  234 (299)
T 2z2n_A          165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT-------PNARPHAITAGA  234 (299)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-------TTCCEEEEEECS
T ss_pred             EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCC-------CCCCceeEEECC
Confidence            99999 6555433  2223344555554 4555555556788999998 55432 232211       223489999999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +|+++++...++.|.+|+. ++. +..+........+.++++ ++|...+++ . .+.|..++..+
T Consensus       235 ~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~-~-~~~l~~~~~~~  295 (299)
T 2z2n_A          235 GIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAM-E-CDKIGKLTLIK  295 (299)
T ss_dssp             TTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEE-T-TTEEEEEEEC-
T ss_pred             CCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEe-c-CCcEEEEEcCc
Confidence            9997777767789999998 443 333322224467899999 888877765 3 56676666543

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.78  E-value=5e-17  Score=162.07  Aligned_cols=252  Identities=9%  Similarity=-0.071  Sum_probs=162.8

Q ss_pred             EeEeccCCCCCCeE---------EEEEc--CCCCE-EEEEeC-CCeEEEEEcC--C-CceecccCCcccCCCCCCceEEE
Q psy17902        133 CTKFNGKPHRASIT---------CIAVT--SDSKH-VYSACK-DGIIIKWLLE--T-RSKVCSSPFVKTDRKSYPPILAL  196 (454)
Q Consensus       133 ~~~~~~~~h~~~V~---------~~~~s--~~~~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~v~~~  196 (454)
                      .+.+..  |...|.         ...|+  |||+. |+.++. +..|.+|++.  + +... .+... ....+...+..+
T Consensus        60 ~~~l~~--~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~-~~~~~~~~~~~~  135 (662)
T 3azo_A           60 EESALP--APWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPV-SAVGGGLRWADP  135 (662)
T ss_dssp             EEESSC--TTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCC-CCSTTCEEEEEE
T ss_pred             cceeCC--CCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCC-ccCCCCccccCc
Confidence            345555  665655         56565  99998 776654 4667777765  2 3322 22110 000145578899


Q ss_pred             EEeCCCcEEEEecCC----------CcEEEEeCCC------ccEEeec-ccCCCeEEEEEcCCCCEEEEEeCC-------
Q psy17902        197 AVANNNELVASGDNN----------SNIKLWSSSL------EHLHTFT-GHKAPITGLAISFECDTLYSSSND-------  252 (454)
Q Consensus       197 ~~~~~~~~l~~~~~d----------g~v~vw~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-------  252 (454)
                      +|+|||+.|++++.+          ..|++|++.+      .....+. .+...+..++|+|||++|+.++.+       
T Consensus       136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~  215 (662)
T 3azo_A          136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWE  215 (662)
T ss_dssp             EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTT
T ss_pred             EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCC
Confidence            999999999998876          5899999966      5666666 666788889999999999987754       


Q ss_pred             -CcEEEEeCC-Cc---eeEEEeeccCCceeEEEeecCCCEEEEeeCCC--cEEEeeccCCeEEEEccccCC---------
Q psy17902        253 -RSIKVWNIE-DR---AYVETLFGHQSAITSLDILAKNRVISSGGTDK--SVRVWKIQEESQLVFNGHSRG---------  316 (454)
Q Consensus       253 -g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~---------  316 (454)
                       ..|++||+. ++   .......+|...+..+.|+|+|++++++..++  .|++||+.++....+..+...         
T Consensus       216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~  295 (662)
T 3azo_A          216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG  295 (662)
T ss_dssp             CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT
T ss_pred             CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc
Confidence             379999998 56   44444445678899999999999888888888  666667666665543332221         


Q ss_pred             eEEEEe-cCCCEEEEEeCCCCEEEE--ecCCCccceeeecccCCCCCCCCCCcEEEE-EEecCCCEEEEecCCCc--EEE
Q psy17902        317 IDMTRR-VNDQQFITCGEDGTLSLW--SILKKVPTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVASGSYDGC--VKL  390 (454)
Q Consensus       317 i~~~~~-~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~--v~i  390 (454)
                      +..+.+ +++..+++++. +.++||  |+.++. +..+..         +...+..+ +++++.-++++++.+..  |.+
T Consensus       296 ~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~---------~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~  364 (662)
T 3azo_A          296 MRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG---------PWTEWAATLTVSGTRAVGVAASPRTAYEVVE  364 (662)
T ss_dssp             CCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS---------SCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred             CceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC---------CCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence            223333 46677778878 999999  544443 333322         22336666 44333334444555544  555


Q ss_pred             EEcCCCcee
Q psy17902        391 WKITPKRTL  399 (454)
Q Consensus       391 wd~~~~~~~  399 (454)
                      ||+.+++..
T Consensus       365 ~d~~~g~~~  373 (662)
T 3azo_A          365 LDTVTGRAR  373 (662)
T ss_dssp             EETTTCCEE
T ss_pred             EECCCCceE
Confidence            566566543

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.78  E-value=3.1e-16  Score=137.82  Aligned_cols=251  Identities=12%  Similarity=0.056  Sum_probs=188.5

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCC-CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeeccc-
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY-PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGH-  230 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~-  230 (454)
                      .+++|++++.++.|.+||.++++.+..+..      +. ..+.+++++|+|++|++  .++.|..||.+++.+..+..+ 
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~------~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~~G~~~W~~~~~~   75 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL------EKGWECNSVAATKAGEILFS--YSKGAKMITRDGRELWNIAAPA   75 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEEC------CTTCCCCEEEECTTSCEEEE--CBSEEEEECTTSCEEEEEECCT
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCC------CccCCCcCeEECCCCCEEEe--CCCCEEEECCCCCEEEEEcCCC
Confidence            357999999999999999999998877763      22 36788999999998884  467899999988888888765 


Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902        231 KAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       231 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~  303 (454)
                      ...+.++.+.++|+++++.+. ++.|..+|. +++.+..+.      .+......+++.++|+++++...++.|.+||..
T Consensus        76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~  154 (276)
T 3no2_A           76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN  154 (276)
T ss_dssp             TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence            357889999999999999887 788888886 577666654      122345567788999999999999999999998


Q ss_pred             CCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902        304 EESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG  382 (454)
Q Consensus       304 ~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  382 (454)
                       ++.+ .+.....+......++++.+++++.++.|..+|..+++.+..+.......   ..-..+..+...++|+++++.
T Consensus       155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~---~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG---VQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBS---CCCSEEEEEEECTTSCEEEEE
T ss_pred             -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCC---ccccccccceEcCCCCEEEEe
Confidence             6666 55444444555556678888888888899999999999998886432110   023448889999999988877


Q ss_pred             cCC--------CcEEEEEc-CCCceeeEeccCCCceeeeEEEE
Q psy17902        383 SYD--------GCVKLWKI-TPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       383 ~~d--------g~v~iwd~-~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      ...        +..+++.+ .+++.+-.+.....-+.+.++|.
T Consensus       231 ~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~  273 (276)
T 3no2_A          231 WQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTICP  273 (276)
T ss_dssp             ECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEEE
T ss_pred             ccCccccccccCCceEEEECCCCCEEEEecCcccccceeeeee
Confidence            421        23466666 45677666666555566666653

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.78  E-value=3.4e-16  Score=157.77  Aligned_cols=265  Identities=14%  Similarity=0.043  Sum_probs=169.0

Q ss_pred             EEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        146 TCIAVTSDSKHVYSACKD---------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      ..++|||||++|+.++.+         +.+.+||+.+++.... .      .+...+...+|||||+.||.+. ++.|++
T Consensus        65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-~------~~~~~~~~~~~SPdG~~la~~~-~~~i~~  136 (740)
T 4a5s_A           65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-E------RIPNNTQWVTWSPVGHKLAYVW-NNDIYV  136 (740)
T ss_dssp             CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-S------CCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred             cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc-c------cCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence            447899999999998876         6677999998875432 2      3556799999999999999985 689999


Q ss_pred             EeCCCccEEee--cccCCCe-----------------EEEEEcCCCCEEEEEeCCC------------------------
Q psy17902        217 WSSSLEHLHTF--TGHKAPI-----------------TGLAISFECDTLYSSSNDR------------------------  253 (454)
Q Consensus       217 w~~~~~~~~~~--~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg------------------------  253 (454)
                      |++.+.....+  .++...+                 .++.|||||+.|+.++.|.                        
T Consensus       137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~  216 (740)
T 4a5s_A          137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV  216 (740)
T ss_dssp             ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred             EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence            99944333332  2333223                 3589999999999875321                        


Q ss_pred             ------------cEEEEeCCC---ce--eEEEee------ccCCceeEEEeecCCCEEEEeeC----CCcEEEeeccCCe
Q psy17902        254 ------------SIKVWNIED---RA--YVETLF------GHQSAITSLDILAKNRVISSGGT----DKSVRVWKIQEES  306 (454)
Q Consensus       254 ------------~i~iwd~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~  306 (454)
                                  .|++||+.+   +.  ....+.      +|...+..++|+|+|+.++....    +..|++||+.+++
T Consensus       217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~  296 (740)
T 4a5s_A          217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS  296 (740)
T ss_dssp             ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred             cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence                        488899988   73  222333      37788999999999986665432    3479999999876


Q ss_pred             ----EE---E--EccccCCe------EEEEecCCCEEE-EEe-CCC--CEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        307 ----QL---V--FNGHSRGI------DMTRRVNDQQFI-TCG-EDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       307 ----~~---~--~~~~~~~i------~~~~~~~~~~l~-~~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                          +.   .  ...+...+      ...+.+++..|+ ..+ .+|  .|++||+..+....... .         ...+
T Consensus       297 ~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~-g---------~~~v  366 (740)
T 4a5s_A          297 GRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK-G---------TWEV  366 (740)
T ss_dssp             TEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC-S---------SSCE
T ss_pred             cccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEeccc-C---------CEEE
Confidence                22   1  13343322      234556777666 555 344  57778887654432221 1         1115


Q ss_pred             EEEEEecCCCE-EEEecC----CCcEEEEEcC--CCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecC
Q psy17902        368 TSVACLHNSDL-VASGSY----DGCVKLWKIT--PKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       368 ~~~~~s~~~~~-l~~~~~----dg~v~iwd~~--~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      ..+.. ++++. +++++.    .+...||.+.  .+.....+...  .....+..+.|||++++++...+.
T Consensus       367 ~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~  436 (740)
T 4a5s_A          367 IGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG  436 (740)
T ss_dssp             EEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred             EEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence            54432 44554 444443    2445555543  33322233321  123568899999999988776544

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.77  E-value=6.2e-16  Score=139.94  Aligned_cols=264  Identities=7%  Similarity=-0.069  Sum_probs=178.3

Q ss_pred             CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEc
Q psy17902        162 KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAIS  240 (454)
Q Consensus       162 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~  240 (454)
                      .++.|.+||..+++....+...............+++. +++++++...++.|.+||. +++.+.++. .......++++
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~   92 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL   92 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence            37899999999887765442110011122346778775 4556666666799999999 566667774 44678899998


Q ss_pred             CCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccC-----CceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEE-EEcc
Q psy17902        241 FECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQ-----SAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQL-VFNG  312 (454)
Q Consensus       241 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-~~~~  312 (454)
                      +++ .++++. .++.|.+||+.+++....+....     .....+++ .++.++++.. .++.|.+||+.+++.. .+..
T Consensus        93 ~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~  170 (328)
T 3dsm_A           93 SDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI  170 (328)
T ss_dssp             ETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred             CCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence            888 455555 78999999999998877665332     14567777 3444444433 4889999999998876 3322


Q ss_pred             ccCCeEEEEecCCCEEEEEeCC----------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902        313 HSRGIDMTRRVNDQQFITCGED----------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG  382 (454)
Q Consensus       313 ~~~~i~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  382 (454)
                      ...+......+++.+++++..+          +.|.+||..+++....+....+        .....++|+|++++|+++
T Consensus       171 g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--------~~p~~la~~~d~~~lyv~  242 (328)
T 3dsm_A          171 GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--------DWPSEVQLNGTRDTLYWI  242 (328)
T ss_dssp             SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--------CCCEEEEECTTSCEEEEE
T ss_pred             CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--------CCceeEEEecCCCEEEEE
Confidence            2222233333445544444443          7899999998887766654322        127899999999988887


Q ss_pred             cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe----cCCCceeeeeee
Q psy17902        383 SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI----GTEHRFGRWKTI  439 (454)
Q Consensus       383 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~----~~d~~i~~W~~~  439 (454)
                      ..  .|.+||..+++................++++|++..|+++.    ..++.|.+|+..
T Consensus       243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~  301 (328)
T 3dsm_A          243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ  301 (328)
T ss_dssp             SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred             cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence            65  89999998876532111101135688999999777777775    568899999876

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.76  E-value=4.4e-17  Score=151.82  Aligned_cols=238  Identities=11%  Similarity=-0.034  Sum_probs=158.9

Q ss_pred             ceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902        192 PILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPI-TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE  267 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  267 (454)
                      .+..++|+|+|++|+.+...   ..|.+|++.+.....+..+...+ ..+.|+|+++.|+.++.++.|++||+.+++...
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~  116 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV  116 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence            36678899999998877543   46888898655555554444333 347899999999999999999999999887655


Q ss_pred             EeeccCCceeE-------------------EEeecCCCEEEEe-----eCCCcEEEeeccCCeEEEEccccCCeEEEEec
Q psy17902        268 TLFGHQSAITS-------------------LDILAKNRVISSG-----GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV  323 (454)
Q Consensus       268 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~  323 (454)
                      ....+......                   +.|+|+++.++.+     ..+..|++||+.++....+..+...+....+.
T Consensus       117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s  196 (396)
T 3c5m_A          117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR  196 (396)
T ss_dssp             EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred             EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence            55444432222                   3456777766543     35668999999988776555566666666665


Q ss_pred             C--CCEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEE
Q psy17902        324 N--DQQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKL  390 (454)
Q Consensus       324 ~--~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~i  390 (454)
                      +  +..|+..+.+      ..|.+||+..+....... ..       ....+..++|+|+|++|+.++.+     +.|++
T Consensus       197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~  268 (396)
T 3c5m_A          197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HA-------EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK  268 (396)
T ss_dssp             TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CC-------TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred             CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cC-------CCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence            4  5556665543      468888886543222111 00       01237889999999977766543     44999


Q ss_pred             EEcCCCceeeEeccCCCceeeeEEEEcC-CCCEEEEEec---------------CCCceeeeeeeCCC
Q psy17902        391 WKITPKRTLEFLQDIPLSGVINSLVFTS-DHKHLVAGIG---------------TEHRFGRWKTIKGV  442 (454)
Q Consensus       391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~~~~~---------------~d~~i~~W~~~~~~  442 (454)
                      ||+.++........ +  + .. +.|+| ||++|+++.+               .+..|.+|+...+.
T Consensus       269 ~d~~~g~~~~l~~~-~--~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~  331 (396)
T 3c5m_A          269 ANPETLENEEVMVM-P--P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS  331 (396)
T ss_dssp             ECTTTCCEEEEEEC-C--S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred             EECCCCCeEEeeeC-C--C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence            99988765433221 1  1 22 89999 9998887532               34678889876554

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.76  E-value=8.4e-15  Score=141.10  Aligned_cols=281  Identities=11%  Similarity=0.066  Sum_probs=195.0

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEe----CCCcEEEEecC-CCcEEE
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVA----NNNELVASGDN-NSNIKL  216 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-dg~v~v  216 (454)
                      .+.++.|+|+|++|++++.++.|.+||+.  +.+.+..+..       ......++|+    |+|+++++++. ++.|.|
T Consensus       198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~V  270 (567)
T 1qks_A          198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVI  270 (567)
T ss_dssp             CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred             CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-------CCCCceeEEccccCCCCCEEEEEEccCCeEEE
Confidence            46789999999999999999999999995  6666655542       2246789999    69998888765 589999


Q ss_pred             EeC-CCccEEeecc----------cCC-CeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCceeE--EEeeccCCceeEEEe
Q psy17902        217 WSS-SLEHLHTFTG----------HKA-PITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYV--ETLFGHQSAITSLDI  281 (454)
Q Consensus       217 w~~-~~~~~~~~~~----------~~~-~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~  281 (454)
                      +|. +.+.+..+..          |.. .+..+..++++..++ .....|.|.++|..+...+  ..+ .......++.|
T Consensus       271 iD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~  349 (567)
T 1qks_A          271 MDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGL  349 (567)
T ss_dssp             EETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEE
T ss_pred             EECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceE
Confidence            998 6666665532          222 678888888766544 4456799999998765432  222 23445678999


Q ss_pred             ecCCCEEEEee-CCCcEEEeeccCCeEEE-Ecc-----ccCCeEEEEecCCCEEE-EEe-CCCCEEEEecCC-------C
Q psy17902        282 LAKNRVISSGG-TDKSVRVWKIQEESQLV-FNG-----HSRGIDMTRRVNDQQFI-TCG-EDGTLSLWSILK-------K  345 (454)
Q Consensus       282 ~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~~~-----~~~~i~~~~~~~~~~l~-~~~-~dg~i~iwd~~~-------~  345 (454)
                      +|++++|++++ .++.|.++|+.+++... ...     |.+.-.....+++..++ ++. .++.|.++|..+       .
T Consensus       350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~  429 (567)
T 1qks_A          350 DGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW  429 (567)
T ss_dssp             CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred             CCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence            99999876655 57899999999988762 221     22212223344445444 443 568999999987       5


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-------CCcEEEEEcCCC-----c-eeeEec-----cCC-
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-------DGCVKLWKITPK-----R-TLEFLQ-----DIP-  406 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~v~iwd~~~~-----~-~~~~~~-----~~~-  406 (454)
                      +.+.++......         -..+..+|++++|.+...       .++|.+||+.+.     . .+..+.     .++ 
T Consensus       430 kvv~~i~~~g~g---------~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~  500 (567)
T 1qks_A          430 KILDSFPALGGG---------SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITE  500 (567)
T ss_dssp             SEEEEEECSCSC---------CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCS
T ss_pred             EEEEEEecCCCC---------CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCC
Confidence            566666543211         234678999998888663       358999999866     2 112332     111 


Q ss_pred             CceeeeEEEEcCCCCEEEEEec----CCCceeeeeeeCC
Q psy17902        407 LSGVINSLVFTSDHKHLVAGIG----TEHRFGRWKTIKG  441 (454)
Q Consensus       407 ~~~~v~~l~~s~d~~~l~~~~~----~d~~i~~W~~~~~  441 (454)
                      ....+..+.|+|+|+++.++..    .++.|.++|..+.
T Consensus       501 ~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~  539 (567)
T 1qks_A          501 GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  539 (567)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             CCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence            2356889999999999988743    3788999887654

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.75  E-value=7.3e-16  Score=135.54  Aligned_cols=238  Identities=11%  Similarity=0.023  Sum_probs=166.1

Q ss_pred             CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902        144 SITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~  222 (454)
                      ...++++++++++++ +.+.++.|.+|+..+........      .....+.+++++++++++++.. ++.|.+|+..+.
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~   97 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPF------NGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN   97 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCC------CSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEee------CCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence            688999999998776 44678899999876544322111      2334678899999999666666 889999999665


Q ss_pred             cEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        223 HLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       223 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      ....+.. ....+.+++++++++++++...++.|.+|+..+.............+.+++++++++++++...++.|.+||
T Consensus        98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~  177 (270)
T 1rwi_B           98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE  177 (270)
T ss_dssp             CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred             eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence            5554432 336789999999998777777788999998766544332223334678899999999777777788999999


Q ss_pred             ccCCeEEEEc-cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902        302 IQEESQLVFN-GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       302 ~~~~~~~~~~-~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      .......... ........+.+. ++..+++...++.|.+|+........ ....        +...+.+++++++|+++
T Consensus       178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~--------~~~~p~~i~~~~~g~l~  248 (270)
T 1rwi_B          178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFT--------GLNTPLAVAVDSDRTVY  248 (270)
T ss_dssp             TTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCC--------SCSCEEEEEECTTCCEE
T ss_pred             cCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccC--------CCCCceeEEECCCCCEE
Confidence            9876655322 222344555554 45555555578899999986543322 1111        12348999999999988


Q ss_pred             EEecCCCcEEEEEcCCCc
Q psy17902        380 ASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       380 ~~~~~dg~v~iwd~~~~~  397 (454)
                      ++...++.|++|++...+
T Consensus       249 v~~~~~~~v~~~~~~~~~  266 (270)
T 1rwi_B          249 VADRGNDRVVKLTSLEHH  266 (270)
T ss_dssp             EEEGGGTEEEEECCCGGG
T ss_pred             EEECCCCEEEEEcCCCcc
Confidence            888899999999987543

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.75  E-value=8e-16  Score=137.30  Aligned_cols=222  Identities=9%  Similarity=0.003  Sum_probs=159.3

Q ss_pred             CCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902        189 SYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE  267 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  267 (454)
                      +.....+++|+|+++ +++++..++.|..|+..+. ...+..+...+.+++++++++++++...++.|.+||..+++...
T Consensus        26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~  104 (296)
T 3e5z_A           26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES  104 (296)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred             CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence            344678899999998 7888888999999999666 77777788889999999999987777667899999998777543


Q ss_pred             Eeecc----CCceeEEEeecCCCEEEE----ee-------------CCCcEEEeeccCCeEEEEccccCCeEEEEe-cCC
Q psy17902        268 TLFGH----QSAITSLDILAKNRVISS----GG-------------TDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VND  325 (454)
Q Consensus       268 ~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~  325 (454)
                      .....    ...+..++++|+|+++++    |+             ..+.|..++.. +....+..+......+.+ +++
T Consensus       105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg  183 (296)
T 3e5z_A          105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG  183 (296)
T ss_dssp             EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTS
T ss_pred             EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCC
Confidence            32211    234678999999998887    33             13456666655 444444444444455555 456


Q ss_pred             CEEEEEeCCCCEEEEecC-CCcc---ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        326 QQFITCGEDGTLSLWSIL-KKVP---THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       326 ~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      ..+++.+.++.|.+|++. .+..   ...+ ..        +...+..++++++|+++++.  ++.|.+|+.. ++.+..
T Consensus       184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~--------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~  251 (296)
T 3e5z_A          184 NLLVSDTGDNATHRYCLNARGETEYQGVHF-TV--------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR  251 (296)
T ss_dssp             CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC--------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred             CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC--------CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence            677666778999999997 4433   1222 11        12236679999999976666  7889999986 677777


Q ss_pred             eccCCCceeeeEEEE-cCCCCEEEEEe
Q psy17902        402 LQDIPLSGVINSLVF-TSDHKHLVAGI  427 (454)
Q Consensus       402 ~~~~~~~~~v~~l~~-s~d~~~l~~~~  427 (454)
                      +..  +.. +++++| +|+++.|++++
T Consensus       252 ~~~--~~~-~~~~~f~~~d~~~L~v~t  275 (296)
T 3e5z_A          252 VLT--PQT-TSNLCFGGPEGRTLYMTV  275 (296)
T ss_dssp             EEC--SSC-CCEEEEESTTSCEEEEEE
T ss_pred             EEC--CCC-ceeEEEECCCCCEEEEEc
Confidence            664  444 899999 68999998883

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.75  E-value=3.5e-16  Score=157.00  Aligned_cols=240  Identities=8%  Similarity=0.019  Sum_probs=166.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDG-----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN--  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--  213 (454)
                      |...+..++|||||++||.+..++     .|++||+.+++......       ....+..++|+|||+.|+.++.++.  
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-------~~~~~~~~~wspDg~~l~~~~~~~~~~  195 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-------ERVKFSCMAWTHDGKGMFYNAYPQQDG  195 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-------EEECSCCEEECTTSSEEEEEECCCCSS
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-------cCcccceEEEEeCCCEEEEEEECCccc
Confidence            445688999999999999876543     89999999887654321       1113567999999999999887765  


Q ss_pred             --------------EEEEeCCCcc---EEe--ecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCC------c
Q psy17902        214 --------------IKLWSSSLEH---LHT--FTGHKAPITGLAISFECDTLYSSSN-----DRSIKVWNIED------R  263 (454)
Q Consensus       214 --------------v~vw~~~~~~---~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~  263 (454)
                                    |++|++.+..   ...  ...|...+..+.|+|+|++|+.++.     +..|++||+.+      +
T Consensus       196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~  275 (710)
T 2xdw_A          196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG  275 (710)
T ss_dssp             CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred             cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence                          9999994322   222  2335666889999999999988765     56899999976      4


Q ss_pred             e-eEEEeeccCCceeEEEeecCCCEEEEeeCC----CcEEEeeccCCeE---EEEccccC--CeEEEEec-CCCEEEEEe
Q psy17902        264 A-YVETLFGHQSAITSLDILAKNRVISSGGTD----KSVRVWKIQEESQ---LVFNGHSR--GIDMTRRV-NDQQFITCG  332 (454)
Q Consensus       264 ~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~---~~~~~~~~--~i~~~~~~-~~~~l~~~~  332 (454)
                      . ....+..+...+.. .|+|+|..|+..+..    +.|.+||+.++..   ..+..+..  .+..+.+. .+.++++..
T Consensus       276 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~  354 (710)
T 2xdw_A          276 ILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL  354 (710)
T ss_dssp             SCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred             ccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence            3 34556666666654 478888877665543    3699999987641   33333333  45555665 444566666


Q ss_pred             CCCC--EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-c---CCCcEEEEEcCCCc
Q psy17902        333 EDGT--LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-S---YDGCVKLWKITPKR  397 (454)
Q Consensus       333 ~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~---~dg~v~iwd~~~~~  397 (454)
                      .++.  |.+|++.++..+..+...         ...+..+.++|++..|+.. +   ..++|++||+.+++
T Consensus       355 ~~g~~~l~~~~~~~g~~~~~l~~~---------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  416 (710)
T 2xdw_A          355 HDVKNTLQLHDLATGALLKIFPLE---------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (710)
T ss_dssp             ETTEEEEEEEETTTCCEEEEECCC---------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             ECCEEEEEEEECCCCCEEEecCCC---------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence            7774  566777667666655432         3348889999998755533 2   35789999998776

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.74  E-value=8.6e-16  Score=154.78  Aligned_cols=279  Identities=10%  Similarity=0.015  Sum_probs=178.0

Q ss_pred             CCCCEEEEEeCCCe---EEEEEc--C---CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEe
Q psy17902        152 SDSKHVYSACKDGI---IIKWLL--E---TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWS  218 (454)
Q Consensus       152 ~~~~~l~~~~~dg~---i~iwd~--~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~  218 (454)
                      |+|++++....++.   -.+|-.  .   .+.....+.......++...+..++|||||++||.+..+     ..|++||
T Consensus       116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d  195 (741)
T 1yr2_A          116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG  195 (741)
T ss_dssp             EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred             EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence            78888776654432   445543  3   222221111111111233468899999999999887653     3699999


Q ss_pred             CCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc--------------EEEEeCCCcee--EEEee--ccCCceeEEE
Q psy17902        219 SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS--------------IKVWNIEDRAY--VETLF--GHQSAITSLD  280 (454)
Q Consensus       219 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~--~~~~~--~~~~~v~~~~  280 (454)
                      +.+........+...+..++|+|| +.|+.++.++.              |++|++.++..  ...+.  .+...+.++.
T Consensus       196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~  274 (741)
T 1yr2_A          196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS  274 (741)
T ss_dssp             TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred             CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence            954444333222223457899999 99988887654              89999987652  22222  2334588999


Q ss_pred             eecCCCEEEEeeCCC-----cEEEeeccCC--e-EEEEccccCCeEEEEecCCCEEEEEeCC----CCEEEEecCCCc-c
Q psy17902        281 ILAKNRVISSGGTDK-----SVRVWKIQEE--S-QLVFNGHSRGIDMTRRVNDQQFITCGED----GTLSLWSILKKV-P  347 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg-----~i~i~d~~~~--~-~~~~~~~~~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~-~  347 (454)
                      |+|+|++|+..+.++     .|++||+.++  . ...+..+........+++++.|+..+.+    +.|.+||+.++. .
T Consensus       275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~  354 (741)
T 1yr2_A          275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPR  354 (741)
T ss_dssp             ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCE
T ss_pred             ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccc
Confidence            999999888777544     8999999876  4 4444444444444456788888877753    459999987742 2


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ...+...        +...+..+.++ ++.++++...|+..+||.+. ++.....+.. +..+.+..++++|++..|+.+
T Consensus       355 ~~~l~~~--------~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~  424 (741)
T 1yr2_A          355 FDTVVPE--------SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGRPGDRHAYLS  424 (741)
T ss_dssp             EEEEECC--------CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECCBTCSCEEEE
T ss_pred             cEEEecC--------CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecCCCCCEEEEE
Confidence            2222211        12236778887 56688888889988887665 4555555543 245778999999999876644


Q ss_pred             ec---CCCceeeeeeeCC
Q psy17902        427 IG---TEHRFGRWKTIKG  441 (454)
Q Consensus       427 ~~---~d~~i~~W~~~~~  441 (454)
                      .+   ..+.|++|+..++
T Consensus       425 ~ss~~~P~~i~~~d~~tg  442 (741)
T 1yr2_A          425 FSSFTQPATVLALDPATA  442 (741)
T ss_dssp             EEETTEEEEEEEEETTTT
T ss_pred             EcCCCCCCEEEEEECCCC
Confidence            22   3578888887554

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.74  E-value=3.3e-15  Score=133.33  Aligned_cols=240  Identities=6%  Similarity=-0.001  Sum_probs=165.5

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ....+..  +.....+++|+|+++ +++++..++.|..|+..++  ...+.      .+...+.+++++++|+++++...
T Consensus        19 ~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~------~~~~~~~~l~~~~dg~l~v~~~~   88 (296)
T 3e5z_A           19 EARRLAD--GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM------HPSHHQNGHCLNKQGHLIACSHG   88 (296)
T ss_dssp             CCEEEEC--CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE------SSCSSEEEEEECTTCCEEEEETT
T ss_pred             cEEEEec--CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE------CCCCCcceeeECCCCcEEEEecC
Confidence            3445555  677789999999998 7888888999999999876  33222      24457899999999998888877


Q ss_pred             CCcEEEEeC-CCccEEeecc----cCCCeEEEEEcCCCCEEEEE----e-------------CCCcEEEEeCCCceeEEE
Q psy17902        211 NSNIKLWSS-SLEHLHTFTG----HKAPITGLAISFECDTLYSS----S-------------NDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~  268 (454)
                      ++.|.+|+. ++........    ....+..++++|+|+++++.    +             ..+.|..++.. +. +..
T Consensus        89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~  166 (296)
T 3e5z_A           89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSA  166 (296)
T ss_dssp             TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEE
T ss_pred             CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEE
Confidence            789999999 5543322221    12346789999999988873    2             13456666665 44 334


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc-CCeE---E-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-EESQ---L-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                      +..+......++|+|+++.+++.+.++.|.+|++. .+..   . .+..+......+.+.++..+++++ ++.|.+|+..
T Consensus       167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~  245 (296)
T 3e5z_A          167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD  245 (296)
T ss_dssp             EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred             eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence            45566778999999999988777788999999997 4443   1 222223333344444433455555 8889999986


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEE-ecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVAC-LHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                       ++.+..+....         . +++++| +|+++.|++++.++ +..++..+.
T Consensus       246 -g~~~~~~~~~~---------~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~  287 (296)
T 3e5z_A          246 -GDELGRVLTPQ---------T-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR  287 (296)
T ss_dssp             -SCEEEEEECSS---------C-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred             -CCEEEEEECCC---------C-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence             66666554322         2 778889 58988888888764 555565544

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.74  E-value=1.7e-16  Score=158.83  Aligned_cols=241  Identities=11%  Similarity=0.009  Sum_probs=163.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEE-----eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902        141 HRASITCIAVTSDSKHVYSA-----CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN--  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--  213 (454)
                      |...+.+++|||||++||.+     +.+..|++||+.++........      .......++|+|||+.|+.++.+..  
T Consensus       119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~------~~~~~~~~~wspDg~~l~~~~~d~~~~  192 (695)
T 2bkl_A          119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI------EGGKYATPKWTPDSKGFYYEWLPTDPS  192 (695)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB------SCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred             CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc------CcccccceEEecCCCEEEEEEecCCCC
Confidence            66679999999999999843     3446899999998875411111      1111267899999999999988765  


Q ss_pred             -----------EEEEeCC-Cc----cEEeecccCCCeEEEEEcCCCCEEEEEeCCC----cEEEEeCCCceeEEEeeccC
Q psy17902        214 -----------IKLWSSS-LE----HLHTFTGHKAPITGLAISFECDTLYSSSNDR----SIKVWNIEDRAYVETLFGHQ  273 (454)
Q Consensus       214 -----------v~vw~~~-~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~  273 (454)
                                 |++|++. +.    .+.....|...+.++.|+|+|++|+.++.++    .|++|+..++.. ..+..+.
T Consensus       193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~  271 (695)
T 2bkl_A          193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV  271 (695)
T ss_dssp             SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred             CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence                       9999993 33    2333344667889999999999998887666    788887765543 3444555


Q ss_pred             CceeEEEeecCCCEEEEee---CCCcEEEeeccCCeE---E-EEccc-cCCeEEEEecCCCEEEEEeCCCCEEEEecC-C
Q psy17902        274 SAITSLDILAKNRVISSGG---TDKSVRVWKIQEESQ---L-VFNGH-SRGIDMTRRVNDQQFITCGEDGTLSLWSIL-K  344 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~---~-~~~~~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~-~  344 (454)
                      ..+....+ +++.+++++.   .++.|.+||+.++..   . .+..+ ...+..+.+.++..+++...++..+||.+. .
T Consensus       272 ~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~  350 (695)
T 2bkl_A          272 GAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK  350 (695)
T ss_dssp             SCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred             CceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence            56666666 5666444443   257899999987652   3 33333 334555556666677788889988888664 3


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE----ecCCCcEEEEEcCCCc
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS----GSYDGCVKLWKITPKR  397 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~----~~~dg~v~iwd~~~~~  397 (454)
                      +.....+...        ....+..+.++|++..|+.    ....++|++||+.+++
T Consensus       351 g~~~~~l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~  399 (695)
T 2bkl_A          351 GKPVRTVQLP--------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK  399 (695)
T ss_dssp             CCEEEECCCS--------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred             CCeeEEecCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            4434333321        1334778889999986663    3335789999998875

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.73  E-value=3.6e-14  Score=130.16  Aligned_cols=278  Identities=10%  Similarity=-0.025  Sum_probs=184.9

Q ss_pred             EEcCCCCEEEEEeC--CC---eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCc
Q psy17902        149 AVTSDSKHVYSACK--DG---IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSN  213 (454)
Q Consensus       149 ~~s~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~  213 (454)
                      ...|+++++++...  .+   .|.+||..+++.+..++.      ...+  .++++|+|++|+++.          .++.
T Consensus        27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~------g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~   98 (373)
T 2mad_H           27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG------GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY   98 (373)
T ss_pred             cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC------CCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence            34477777777653  22   889999999887766653      2223  899999999999886          3678


Q ss_pred             EEEEeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEE-eeccCCceeEEEee
Q psy17902        214 IKLWSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVET-LFGHQSAITSLDIL  282 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~  282 (454)
                      |.+||. +.+.+..+...       ......+.|+|+|++|+++..  ++.|.++| .+++.+.. +.. ..   ++.+.
T Consensus        99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~  173 (373)
T 2mad_H           99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIH  173 (373)
T ss_pred             EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEE
Confidence            999999 55555554321       123457899999999999874  47899999 99988777 532 22   24455


Q ss_pred             cCC-CEEEEeeCCCcEEEeeccCCeEEEE-c-----cccCCe--EEEEecCCCEEEEEeCCCCEEEEecCCCcc--ceee
Q psy17902        283 AKN-RVISSGGTDKSVRVWKIQEESQLVF-N-----GHSRGI--DMTRRVNDQQFITCGEDGTLSLWSILKKVP--THTI  351 (454)
Q Consensus       283 ~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~-----~~~~~i--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~  351 (454)
                      |.+ ..+++.+.||.+.++|. +++.... .     ....++  .......+..++..+..+.+.+.|+.....  +..+
T Consensus       174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~  252 (373)
T 2mad_H          174 PGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI  252 (373)
T ss_pred             eCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence            555 45667778999999999 7666521 1     111111  112233344544445788999999865432  2222


Q ss_pred             ecccCC-CCCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        352 PVAHGY-DSSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       352 ~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      ...... ......+.....+.++|+++.|+++..          .+.|.++|+.+++.+..+.   ..+...+++|+|||
T Consensus       253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~---~g~~p~~i~~s~Dg  329 (373)
T 2mad_H          253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDG  329 (373)
T ss_pred             eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE---CCCCcCeEEECCCC
Confidence            211100 000011233455889999987777543          3579999999998888885   34468899999999


Q ss_pred             C-EEEEEecCCCceeeeeeeCCCe
Q psy17902        421 K-HLVAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       421 ~-~l~~~~~~d~~i~~W~~~~~~~  443 (454)
                      + .++++...++.|.+||..+...
T Consensus       330 ~~~l~v~~~~~~~V~ViD~~t~~v  353 (373)
T 2mad_H          330 GPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             CeEEEEEcCCCCeEEEEECCCCCE
Confidence            9 6776633689999999876543

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.72  E-value=3.7e-15  Score=134.75  Aligned_cols=281  Identities=11%  Similarity=0.005  Sum_probs=190.6

Q ss_pred             EEEcCCCCEEEEEeC-----CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCC
Q psy17902        148 IAVTSDSKHVYSACK-----DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNS  212 (454)
Q Consensus       148 ~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg  212 (454)
                      ....|+++.+++...     ++.|.++|..+.+.+..++.      ...+ . ++++|+|++|++++          .++
T Consensus        38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v------G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~  109 (386)
T 3sjl_D           38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------GFLP-N-PVVADDGSFIAHASTVFSRIARGERTD  109 (386)
T ss_dssp             CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred             eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC------CCCC-c-EEECCCCCEEEEEcccccccccCCCCC
Confidence            345689998888865     68999999999998887763      2223 3 99999999888775          357


Q ss_pred             cEEEEeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEee
Q psy17902        213 NIKLWSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDIL  282 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~  282 (454)
                      .|.+||. +.+.+..+...       ......+.|+|||++++++..  ++.|.++|+.+++.+.++....  . ...+.
T Consensus       110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P  186 (386)
T 3sjl_D          110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFP  186 (386)
T ss_dssp             EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEE
T ss_pred             EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeec
Confidence            8999999 66666665321       124567899999999998874  6899999999999988885322  1 12232


Q ss_pred             cCCCEEEEeeCCCcEEEeeccC-CeEEE-Ecccc----CCe--EEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeee
Q psy17902        283 AKNRVISSGGTDKSVRVWKIQE-ESQLV-FNGHS----RGI--DMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIP  352 (454)
Q Consensus       283 ~~~~~l~~~~~dg~i~i~d~~~-~~~~~-~~~~~----~~i--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~  352 (454)
                      ...+.+++.+.||.+.+.++.. ++... .....    ..+  ...+...++.++..+.+|.|++.|+.+..  .+..+.
T Consensus       187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~  266 (386)
T 3sjl_D          187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE  266 (386)
T ss_dssp             EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred             CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeeccee
Confidence            2345667778889988888876 44321 11111    111  11222345555557778999999997654  333332


Q ss_pred             cccC-CCCCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        353 VAHG-YDSSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       353 ~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      .... .......+.....++++++++.|++...          .+.|.++|+.+++.+..+.   ....+.+|+|+||++
T Consensus       267 ~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~---vg~~~~~lavs~D~~  343 (386)
T 3sjl_D          267 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQDEK  343 (386)
T ss_dssp             SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECSSSS
T ss_pred             ccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE---CCCCcceEEECCCCC
Confidence            1000 0000001111345777999987777542          2579999999999998887   456789999999997


Q ss_pred             -EEEEEecCCCceeeeeeeCCC
Q psy17902        422 -HLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       422 -~l~~~~~~d~~i~~W~~~~~~  442 (454)
                       +|+++.+.++.|.++|..++.
T Consensus       344 ~~ly~tn~~~~~VsViD~~t~k  365 (386)
T 3sjl_D          344 PLLYALSTGDKTLYIHDAESGE  365 (386)
T ss_dssp             CEEEEEETTTTEEEEEETTTCC
T ss_pred             eEEEEEcCCCCeEEEEECCCCc
Confidence             788876779999999987653

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.72  E-value=2.9e-14  Score=137.40  Aligned_cols=274  Identities=8%  Similarity=-0.028  Sum_probs=192.3

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---CCccEEeec
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---SLEHLHTFT  228 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~~~~~~~~~  228 (454)
                      |.+.++++...++.|.++|..+++.+..+..       ...+..+.|+|+|+++++++.++.|.+||+   +.+.+..+.
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~  237 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK  237 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred             CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence            4455667777889999999999988877653       225668999999999999999999999999   556666665


Q ss_pred             ccCCCeEEEEEc----CCCCEEEEEeC-CCcEEEEeCCCceeEEEeecc-----------CCceeEEEeecCCC-EEEEe
Q psy17902        229 GHKAPITGLAIS----FECDTLYSSSN-DRSIKVWNIEDRAYVETLFGH-----------QSAITSLDILAKNR-VISSG  291 (454)
Q Consensus       229 ~~~~~v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~-~l~~~  291 (454)
                      ... ....++|+    |+|+++++++. +++|.++|..+.+.+..+...           ...+..+..++++. ++++.
T Consensus       238 ~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~  316 (567)
T 1qks_A          238 IGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV  316 (567)
T ss_dssp             CCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             cCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence            433 46789999    69998887765 589999999999888766421           12577888888765 45555


Q ss_pred             eCCCcEEEeeccCCeEE--EEccccCCeEE-EEecCCCEEEEEe-CCCCEEEEecCCCccceeeec-ccCCCCCCCCCCc
Q psy17902        292 GTDKSVRVWKIQEESQL--VFNGHSRGIDM-TRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPV-AHGYDSSSSEPNW  366 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~--~~~~~~~~i~~-~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~  366 (454)
                      ...|.|.++|......+  ........... .+.+++.+|+++. .++.|.++|+.+++.+..+.. ...     .|+..
T Consensus       317 ~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~-----Phpg~  391 (567)
T 1qks_A          317 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT-----PHPGR  391 (567)
T ss_dssp             TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS-----BCCTT
T ss_pred             cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC-----CCCcc
Confidence            67799999998875433  11112222333 3455677776655 678999999999988777764 221     23321


Q ss_pred             EEEEEEecCCC-EEEEec-CCCcEEEEEcCC-------CceeeEeccCCCceeeeEEEEcCCCCEEEEEecC------CC
Q psy17902        367 ITSVACLHNSD-LVASGS-YDGCVKLWKITP-------KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT------EH  431 (454)
Q Consensus       367 i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~------d~  431 (454)
                      -..+ ++|++. +++++. .+++|.++|..+       .+.+..+...  ...-..+.++|++++|.+....      ..
T Consensus       392 g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~  468 (567)
T 1qks_A          392 GANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISG  468 (567)
T ss_dssp             CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred             ceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence            2222 678744 545553 468999999987       4566666642  2333457899999999987421      35


Q ss_pred             ceeeeeeeCC
Q psy17902        432 RFGRWKTIKG  441 (454)
Q Consensus       432 ~i~~W~~~~~  441 (454)
                      .|.+++..+.
T Consensus       469 ~v~v~d~~~~  478 (567)
T 1qks_A          469 SVAVFDIKAM  478 (567)
T ss_dssp             CEEEEEGGGC
T ss_pred             eEEEEECCcc
Confidence            8889987654

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.72  E-value=1.9e-14  Score=130.67  Aligned_cols=240  Identities=11%  Similarity=0.100  Sum_probs=160.7

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-  211 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-  211 (454)
                      ...+.+  +...+.+++|+|++++++++..++.|.+||..++.......      .+...+.++++++++++++++..+ 
T Consensus        37 ~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~~~~i~~~~dg~l~v~~~~~~  108 (333)
T 2dg1_A           37 WLEISK--KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV------SHKANPAAIKIHKDGRLFVCYLGDF  108 (333)
T ss_dssp             EEEEES--SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE------CSSSSEEEEEECTTSCEEEEECTTS
T ss_pred             eEEEec--cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee------CCCCCcceEEECCCCcEEEEeCCCC
Confidence            344555  77778999999999988888889999999998776543221      134579999999999988877666 


Q ss_pred             ---CcEEEEeCCCccEE-eec--ccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCceeEE
Q psy17902        212 ---SNIKLWSSSLEHLH-TFT--GHKAPITGLAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSAITSL  279 (454)
Q Consensus       212 ---g~v~vw~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~  279 (454)
                         +.|.+|+..+..+. .+.  .+...+.+++++|+++++++...      .+.|..|+..+++... +..+...+.++
T Consensus       109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i  187 (333)
T 2dg1_A          109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGI  187 (333)
T ss_dssp             SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEE
T ss_pred             CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccce
Confidence               68999998554443 222  24467899999999987776653      3567777776554433 32334457899


Q ss_pred             EeecCCCEE-EEeeCCCcEEEeeccC-CeEE-E--------EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc
Q psy17902        280 DILAKNRVI-SSGGTDKSVRVWKIQE-ESQL-V--------FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP  347 (454)
Q Consensus       280 ~~~~~~~~l-~~~~~dg~i~i~d~~~-~~~~-~--------~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~  347 (454)
                      +|+|+++.| ++.+.++.|.+|++.+ +... .        +.++ .....+.+. ++..+++...++.|.+||. .+..
T Consensus       188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~  265 (333)
T 2dg1_A          188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYP  265 (333)
T ss_dssp             EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCE
T ss_pred             EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCE
Confidence            999999855 4445678999999964 2211 1        1111 233444444 5566666667789999998 4555


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      +..+......   ..+...+.+++|+|++..|++++.++
T Consensus       266 ~~~~~~~~~~---~g~~~~~~~~~~~~dg~~L~v~~~~g  301 (333)
T 2dg1_A          266 IGQILIPGRD---EGHMLRSTHPQFIPGTNQLIICSNDI  301 (333)
T ss_dssp             EEEEECTTGG---GTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred             EEEEEcCCCc---cccccCcceEEECCCCCEEEEEeCcc
Confidence            5555432110   00112478899999987776665553

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.72  E-value=2.4e-13  Score=121.24  Aligned_cols=275  Identities=9%  Similarity=-0.002  Sum_probs=187.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      ....+.++++.++|+++++...++.|.+|+.. +.... +..    ......+.++++.+++.++++...++.|..|+..
T Consensus        18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~----~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~   91 (300)
T 2qc5_A           18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEV----PTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK   91 (300)
T ss_dssp             TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EEC----SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred             CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EEC----CCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence            55678999999999988877778999999987 44332 111    1233578999999999988877778899999987


Q ss_pred             CccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        221 LEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       221 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                      +.. ..+  ......+.++++.+++.++++...++.|..||.. ++.... +......+.++++.+++++.++...++.|
T Consensus        92 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i  169 (300)
T 2qc5_A           92 GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI  169 (300)
T ss_dssp             SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred             CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence            443 333  2234678999999999877777668899999987 554422 22345678999999999977766667889


Q ss_pred             EEeeccCCeEEEEc--cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        298 RVWKIQEESQLVFN--GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       298 ~i~d~~~~~~~~~~--~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      ..|+. ++....+.  ........+... ++..+++....+.|.+|+. ++.... +....       ....+.++++++
T Consensus       170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~-------~~~~~~~i~~d~  239 (300)
T 2qc5_A          170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPT-------PNARPHAITAGK  239 (300)
T ss_dssp             EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSS-------TTCCEEEEEECS
T ss_pred             EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCC-------CCCCceEEEECC
Confidence            99998 55544332  223344555554 4544555445678999998 443322 22111       123388999999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +|++.++...++.|..|+. ++... .+........+.+++++++|...++. . . .|..++.
T Consensus       240 ~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~-~-~-~i~~~~p  298 (300)
T 2qc5_A          240 NSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFAL-K-C-KIGKLNL  298 (300)
T ss_dssp             TTCEEEEETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEEC-S-S-EEEEEEE
T ss_pred             CCCEEEeccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEc-c-C-ceEEeCC
Confidence            9997777777789999998 44333 33221234568899999999866554 3 3 5555543

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.71  E-value=4.9e-15  Score=130.20  Aligned_cols=237  Identities=9%  Similarity=-0.012  Sum_probs=160.7

Q ss_pred             ceEEEEEeCCCcEEE-EecCCCcEEEEeCCCccEEee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        192 PILALAVANNNELVA-SGDNNSNIKLWSSSLEHLHTF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      ...++++++++++++ +...++.|.+|+..+.....+ ..+...+.+++++++++++++.. ++.|.+||..........
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~  103 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP  103 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence            678999999999777 546788999999844333332 23335678899999988555555 889999998765543222


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc-cccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-GHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVP  347 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~  347 (454)
                      ......+.+++++++++++++...++.|.+|+..+....... ........+. .+++..+++...++.|.+||......
T Consensus       104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~  183 (270)
T 1rwi_B          104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ  183 (270)
T ss_dssp             CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred             cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence            223356899999999998887777889999987655443221 1112233344 44566666666778999999876543


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      ......         ....+..++++++|.++++...++.|.+|+........ +.. .+...+.+++++|+|+.+++. 
T Consensus       184 ~~~~~~---------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~~g~l~v~~-  251 (270)
T 1rwi_B          184 VVLPFT---------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF-TGLNTPLAVAVDSDRTVYVAD-  251 (270)
T ss_dssp             EECCCS---------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC-CSCSCEEEEEECTTCCEEEEE-
T ss_pred             Eeeccc---------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc-CCCCCceeEEECCCCCEEEEE-
Confidence            322111         11338899999999888888788899999986543322 221 133568899999999855555 


Q ss_pred             cCCCceeeeeeeCC
Q psy17902        428 GTEHRFGRWKTIKG  441 (454)
Q Consensus       428 ~~d~~i~~W~~~~~  441 (454)
                      ..+++|.+++....
T Consensus       252 ~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          252 RGNDRVVKLTSLEH  265 (270)
T ss_dssp             GGGTEEEEECCCGG
T ss_pred             CCCCEEEEEcCCCc
Confidence            78999999987544

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.71  E-value=1.5e-14  Score=126.95  Aligned_cols=211  Identities=10%  Similarity=0.075  Sum_probs=165.4

Q ss_pred             CCcEEEEecCCCcEEEEeC-CCccEEeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CCcee
Q psy17902        201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QSAIT  277 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~  277 (454)
                      .+++|++++.++.|.+||. +++.+..+..+. ..+.++.++|+|++|+  +.++.|..||. +++.+..+..+ ...+.
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~   80 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ   80 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred             CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence            4678999999999999999 899998888776 4788999999999888  45788999999 78888888764 35788


Q ss_pred             EEEeecCCCEEEEeeC-CCcEEEeeccCCeEE-EEcc-------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        278 SLDILAKNRVISSGGT-DKSVRVWKIQEESQL-VFNG-------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ++.+.++|+++++.+. ++.|..+|. .++.+ .+..       +.........++++++++...++.|..||.. ++.+
T Consensus        81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~  158 (276)
T 3no2_A           81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL  158 (276)
T ss_dssp             EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence            9999999999998877 777888876 44544 2221       1111122345678889999899999999998 8888


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC----CceeeeEEEEcCCCCEEE
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP----LSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~d~~~l~  424 (454)
                      ..+....          .+.++.+.++|+++++++.++.|..+|..+++.+..+....    ....+..++..++|..++
T Consensus       159 w~~~~~~----------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v  228 (276)
T 3no2_A          159 NSVKLSG----------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI  228 (276)
T ss_dssp             EEEECSS----------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred             EEEECCC----------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence            8886532          14567788999999999988899999999998887775321    123378899999999888


Q ss_pred             EE
Q psy17902        425 AG  426 (454)
Q Consensus       425 ~~  426 (454)
                      +.
T Consensus       229 ~~  230 (276)
T 3no2_A          229 CN  230 (276)
T ss_dssp             EE
T ss_pred             Ee
Confidence            77

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.70  E-value=3.6e-15  Score=136.23  Aligned_cols=227  Identities=13%  Similarity=0.116  Sum_probs=150.9

Q ss_pred             CeEEEEEcCCCCEEEEEeCC---C--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-------
Q psy17902        144 SITCIAVTSDSKHVYSACKD---G--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-------  211 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------  211 (454)
                      .+.+++|||||++|+.++.+   +  .|.+|++.++.......       ... +..++|+|+|+.|+.++.+       
T Consensus        60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-------~~~-~~~~~wspdg~~l~~~~~~~~~~~~~  131 (347)
T 2gop_A           60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-------AKN-IRSLEWNEDSRKLLIVGFKRREDEDF  131 (347)
T ss_dssp             SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-------ESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred             cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-------CCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence            47889999999999987754   3  47788888765443322       222 8999999999988887632       


Q ss_pred             --------------------CcEEEEeCCCccE-EeecccCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCc
Q psy17902        212 --------------------SNIKLWSSSLEHL-HTFTGHKAPITGLAISFECDTLYSSSNDR-------SIKVWNIEDR  263 (454)
Q Consensus       212 --------------------g~v~vw~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~  263 (454)
                                          ..|.+|++.+... ..+.. . .+..++|+|++ ++++++.++       ...||.+.++
T Consensus       132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~  208 (347)
T 2gop_A          132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG  208 (347)
T ss_dssp             -----CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred             EEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence                                5788999954444 55544 4 78899999999 777776542       3344443355


Q ss_pred             eeEEEeeccCCceeEEEeecCCCEEEEeeCC--------CcEEEeeccCCeEEEE-ccccCCeEE-EEecCCCEEEEEeC
Q psy17902        264 AYVETLFGHQSAITSLDILAKNRVISSGGTD--------KSVRVWKIQEESQLVF-NGHSRGIDM-TRRVNDQQFITCGE  333 (454)
Q Consensus       264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~-~~~~~~i~~-~~~~~~~~l~~~~~  333 (454)
                      +. ..+..+ ..+..+  +|+|+.|+.++.+        ..|.+||  ++....+ ..+...+.. +.+.++ .+++++.
T Consensus       209 ~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~  281 (347)
T 2gop_A          209 KE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFE  281 (347)
T ss_dssp             EE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEE
T ss_pred             ce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEec
Confidence            43 334344 455544  9999988776644        3688888  4444433 344555653 566644 7788889


Q ss_pred             CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE-EEEEcCCCceeeEec
Q psy17902        334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV-KLWKITPKRTLEFLQ  403 (454)
Q Consensus       334 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v-~iwd~~~~~~~~~~~  403 (454)
                      ++.++|| +.++.......          +...|.+++|+|  .++++++.++.. .+|.+. +. ...+.
T Consensus       282 ~~~~~l~-~~~g~~~~~~~----------~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt  337 (347)
T 2gop_A          282 EGSVNLY-IWDGEIKPIAK----------GRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLT  337 (347)
T ss_dssp             TTEEEEE-EESSSEEEEEC----------SSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECC
T ss_pred             CCcEEEE-EcCCceEEEec----------CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEec
Confidence            9999999 87544322221          133489999999  677777777665 788776 43 33344

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.69  E-value=4.4e-14  Score=127.77  Aligned_cols=251  Identities=8%  Similarity=-0.020  Sum_probs=171.0

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~  221 (454)
                      .....+++.. +.++++...++.|.+||..+++.+..+.       .......++++++++++++...++.|.+||. ++
T Consensus        44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~  115 (328)
T 3dsm_A           44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY  115 (328)
T ss_dssp             SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred             ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence            4467787753 4455555667999999999998877663       2346889999999865555547899999999 44


Q ss_pred             ccEEeecccC-----CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902        222 EHLHTFTGHK-----APITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       222 ~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                      .....+....     .....+++  ++..|+++.  .++.|.+||+.+++.+..+.. ......+.++|+|++++++..+
T Consensus       116 ~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~  192 (328)
T 3dsm_A          116 EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGG  192 (328)
T ss_dssp             EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCB
T ss_pred             eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCC
Confidence            4444544322     14556777  345555555  488999999999988877754 3345789999999877776654


Q ss_pred             ----------CcEEEeeccCCeEE-EEccc-cCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        295 ----------KSVRVWKIQEESQL-VFNGH-SRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       295 ----------g~i~i~d~~~~~~~-~~~~~-~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                                +.|.++|..+++.. .+... ......+.+ ++++.++++..  .|.+||+.+++.........      
T Consensus       193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~------  264 (328)
T 3dsm_A          193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF------  264 (328)
T ss_dssp             CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC------
T ss_pred             ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC------
Confidence                      78999999988766 23221 123344444 45777776654  89999998876532111110      


Q ss_pred             CCCCcEEEEEEec-CCCEEEEe----cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        362 SEPNWITSVACLH-NSDLVASG----SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       362 ~~~~~i~~~~~s~-~~~~l~~~----~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                       .......++++| ++.++++.    ..++.|.+||.. ++.+..+..   ......++|-
T Consensus       265 -~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~---G~~P~~~~~~  320 (328)
T 3dsm_A          265 -RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV---GIIPGAFCWK  320 (328)
T ss_dssp             -CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE---EESEEEEEEE
T ss_pred             -CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe---ccCcceEEEe
Confidence             123488999999 56666666    578899999998 888877763   3445556653

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.69  E-value=4.1e-14  Score=127.22  Aligned_cols=239  Identities=7%  Similarity=-0.003  Sum_probs=161.5

Q ss_pred             CceEEEEEeCCCcEEEE-------ecCCCcEEEEeCCCccEEeecc-----cCCCeEEEEEcCC-CCEEEEEeCCCcEEE
Q psy17902        191 PPILALAVANNNELVAS-------GDNNSNIKLWSSSLEHLHTFTG-----HKAPITGLAISFE-CDTLYSSSNDRSIKV  257 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~-------~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~dg~i~i  257 (454)
                      ....+++|++++.++++       +..++.|.+|+........+..     +...+.+++++++ ++ |+.++..+.|.+
T Consensus        18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~~   96 (314)
T 1pjx_A           18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLLV   96 (314)
T ss_dssp             TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEEE
T ss_pred             CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEEE
Confidence            35678999999988877       5668899999984444444432     5567899999998 65 444554557999


Q ss_pred             EeCCCceeEEE-eec----cCCceeEEEeecCCCEEEEeeCC---------------CcEEEeeccCCeEEEEccccCCe
Q psy17902        258 WNIEDRAYVET-LFG----HQSAITSLDILAKNRVISSGGTD---------------KSVRVWKIQEESQLVFNGHSRGI  317 (454)
Q Consensus       258 wd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~i  317 (454)
                      ||.. ++.... ...    ....+.+++++++++++++...+               +.|..|+.. +....+..+....
T Consensus        97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~  174 (314)
T 1pjx_A           97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP  174 (314)
T ss_dssp             EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE
T ss_pred             EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc
Confidence            9998 665433 211    12357899999999888776554               567777766 4444333333333


Q ss_pred             EEEEec-----CCCEEEEE-eCCCCEEEEecC-CCccce--eeecccCCCCCCCCC-CcEEEEEEecCCCEEEEecCCCc
Q psy17902        318 DMTRRV-----NDQQFITC-GEDGTLSLWSIL-KKVPTH--TIPVAHGYDSSSSEP-NWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       318 ~~~~~~-----~~~~l~~~-~~dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                      ..+.+.     +++.++++ ..++.|.+|++. .+....  .+....      .+. ..+..++++++|+++++...++.
T Consensus       175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~~~~p~~i~~d~~G~l~v~~~~~~~  248 (314)
T 1pjx_A          175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP------GTHEGGADGMDFDEDNNLLVANWGSSH  248 (314)
T ss_dssp             EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC------CCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred             ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC------CCCCCCCCceEECCCCCEEEEEcCCCE
Confidence            444444     44355544 567899999976 333211  111100      111 34788999999998888777889


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |.+||..+++.+..+..  +...+.+++|+|+|+.|+++...++.|.+|+...
T Consensus       249 i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          249 IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            99999887776666654  3467899999999997777757778898888653

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.65  E-value=1.5e-12  Score=115.99  Aligned_cols=235  Identities=7%  Similarity=0.010  Sum_probs=164.7

Q ss_pred             CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT--GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +...+.++++.++|+++++...++.|.+|+.. ..+..+.  .+...+.++++.+++.++++...++.|..||.. +...
T Consensus        13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~   90 (299)
T 2z2n_A           13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK   90 (299)
T ss_dssp             SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred             cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE
Confidence            34578999999999988877768899999987 4444332  345679999999999877777668889999986 3321


Q ss_pred             -EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902        267 -ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       267 -~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~  342 (454)
                       ..+......+.++++.+++.++++...++.|.+||. ++....+.  .....+..+... ++..+++...++.|.+||.
T Consensus        91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~  169 (299)
T 2z2n_A           91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE  169 (299)
T ss_dssp             EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred             EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence             122224557899999999988887777889999998 55444332  223345555555 4555555556788999998


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH  422 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~  422 (454)
                       ++.... +....       ....+..++++++|.++++...++.|.+|+. ++.... +........+.+++++++|..
T Consensus       170 -~g~~~~-~~~~~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l  238 (299)
T 2z2n_A          170 -SGDITE-FKIPT-------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDL  238 (299)
T ss_dssp             -TCCEEE-EECSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCE
T ss_pred             -CCcEEE-eeCCC-------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCE
Confidence             554332 22111       1233889999999998777777889999998 665332 322224467889999999986


Q ss_pred             EEEEecCCCceeeeee
Q psy17902        423 LVAGIGTEHRFGRWKT  438 (454)
Q Consensus       423 l~~~~~~d~~i~~W~~  438 (454)
                      +++. ..++.|.+|+.
T Consensus       239 ~v~~-~~~~~i~~~d~  253 (299)
T 2z2n_A          239 WFTE-WGANKIGRLTS  253 (299)
T ss_dssp             EEEE-TTTTEEEEEET
T ss_pred             EEec-cCCceEEEECC
Confidence            5554 56788988886

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.65  E-value=6.7e-14  Score=126.57  Aligned_cols=256  Identities=8%  Similarity=-0.014  Sum_probs=173.0

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcc-cCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902        147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVK-TDRKSYPPILALAVANNNELVASGDN--NSN  213 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~  213 (454)
                      .++++|+|++|+++.          .++.|.+||..+.+....+.... ...........++|+|||++|+++..  ++.
T Consensus        82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~  161 (386)
T 3sjl_D           82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA  161 (386)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred             cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence            399999999998876          35789999999998877765321 00001124557999999999988864  689


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-ceeEEEeecc----CCcee-EEEee-cCC
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-RAYVETLFGH----QSAIT-SLDIL-AKN  285 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~----~~~v~-~~~~~-~~~  285 (454)
                      |.++|+ +.+.+.++... + . ...+....+.+++.+.||.+.+.++.+ ++.......+    ..++. ...|. ++|
T Consensus       162 VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG  238 (386)
T 3sjl_D          162 VGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG  238 (386)
T ss_dssp             EEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred             EEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence            999999 66666666432 1 1 223333456777888899999999876 5543221111    12221 24554 566


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE---EEc--c--------ccCCe-EEEEecCCCEEEEEeC----------CCCEEEEe
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL---VFN--G--------HSRGI-DMTRRVNDQQFITCGE----------DGTLSLWS  341 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~---~~~--~--------~~~~i-~~~~~~~~~~l~~~~~----------dg~i~iwd  341 (454)
                      ++++ .+.+|.|++.|+.+....   .+.  .        ..... .....+.++.++....          .+.|.++|
T Consensus       239 ~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD  317 (386)
T 3sjl_D          239 RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD  317 (386)
T ss_dssp             EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred             cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence            6555 456899999999766432   111  0        11121 2233456666665532          25799999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +.+.+.+..+.....          +..|+++++++ +|+++ ..++.|.++|..+++.+..+..   .+..+.|.+++|
T Consensus       318 ~~t~kv~~~i~vg~~----------~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~---~~~p~~l~~s~d  384 (386)
T 3sjl_D          318 AKTGERLAKFEMGHE----------IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ---LGHGPQVITTAD  384 (386)
T ss_dssp             TTTCCEEEEEEEEEE----------ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC---CCSSCCEEEECC
T ss_pred             CCCCeEEEEEECCCC----------cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC---CCCCceeEECCc
Confidence            999999999987543          78999999997 66664 5589999999999999998875   455667888877

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.65  E-value=3.1e-14  Score=131.17  Aligned_cols=276  Identities=12%  Similarity=0.058  Sum_probs=183.6

Q ss_pred             CCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCcEEE
Q psy17902        152 SDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSNIKL  216 (454)
Q Consensus       152 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~v~v  216 (454)
                      ++++.+++....     +.|.++|..+.+.+..++.     + ..+  .++++|++++|+++.          .++.|.+
T Consensus        82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv  153 (426)
T 3c75_H           82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----G-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV  153 (426)
T ss_dssp             CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----C-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence            456666665542     6999999999999888774     2 234  799999999888876          3678999


Q ss_pred             EeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-
Q psy17902        217 WSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-  285 (454)
Q Consensus       217 w~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-  285 (454)
                      +|. +.+.+..+.-.       ......+.|+|+|++|+++..  ++.|.+.|+.+++.+..+.... .   ....|++ 
T Consensus       154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-~---~~~~p~g~  229 (426)
T 3c75_H          154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-C---YHIFPASP  229 (426)
T ss_dssp             ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E---EEEEEEET
T ss_pred             EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-c---eeeccCCC
Confidence            999 66666655421       133557899999999999874  5789999999999888775322 1   2333433 


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEEEE-----ccccCC--eEEEEecCCCEEEEEeCCCCEEEEecCCCccc--eeeecccC
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQLVF-----NGHSRG--IDMTRRVNDQQFITCGEDGTLSLWSILKKVPT--HTIPVAHG  356 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~--i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~  356 (454)
                      ..+++.+.||.+.+.++.+++....     .....+  +.....+.+..++..+..+.|.+.|+......  ..+.....
T Consensus       230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~  309 (426)
T 3c75_H          230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE  309 (426)
T ss_dssp             TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred             cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence            5556666778777777755444311     111111  12223445666666677889999998654321  11111100


Q ss_pred             CC-CCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEE
Q psy17902        357 YD-SSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLV  424 (454)
Q Consensus       357 ~~-~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~  424 (454)
                      .. .....+.....++++|+++.+++...          ++.|.++|+.+.+.+..+.   .......++|+|||+ +|+
T Consensus       310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~---vg~~P~gia~spDg~~~ly  386 (426)
T 3c75_H          310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE---LGHEIDSINVSQDAEPLLY  386 (426)
T ss_dssp             TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECCSSSCEEE
T ss_pred             cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE---CCCCcCeEEEccCCCEEEE
Confidence            00 00000111223689999887666542          3579999999999998886   345689999999999 888


Q ss_pred             EEecCCCceeeeeeeCCC
Q psy17902        425 AGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       425 ~~~~~d~~i~~W~~~~~~  442 (454)
                      ++...++.|.++|..+..
T Consensus       387 v~n~~s~~VsVID~~t~k  404 (426)
T 3c75_H          387 ALSAGTQTLHIYDAATGE  404 (426)
T ss_dssp             EEETTTTEEEEEETTTCC
T ss_pred             EEcCCCCeEEEEECCCCC
Confidence            885579999999987654

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.65  E-value=1.4e-14  Score=146.08  Aligned_cols=240  Identities=10%  Similarity=0.031  Sum_probs=160.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902        141 HRASITCIAVTSDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN--  213 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--  213 (454)
                      |...+..++|||||++||.++.+     ..|++||+.+++......       +...+..++|+|| +.|+.++.++.  
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-------~~~~~~~~~wspD-~~l~~~~~~~~~~  232 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-------KWVKFSGLAWLGN-DALLYSRFAEPKE  232 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-------EEEESCCCEESTT-SEEEEEECCCC--
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-------CCceeccEEEECC-CEEEEEEecCccc
Confidence            43468899999999999987654     469999999987653211       1112357899999 88888876554  


Q ss_pred             ------------EEEEeCCCcc---EEee--cccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCc--eeEEEe
Q psy17902        214 ------------IKLWSSSLEH---LHTF--TGHKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDR--AYVETL  269 (454)
Q Consensus       214 ------------v~vw~~~~~~---~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~  269 (454)
                                  |++|++.+..   ...+  ..+...+.++.|+|+|++|+..+.++     .|++||+.++  .....+
T Consensus       233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l  312 (741)
T 1yr2_A          233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL  312 (741)
T ss_dssp             ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred             ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence                        8899983222   2223  33444688999999999988877544     8999999876  314455


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCC----CcEEEeeccCC--eEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTD----KSVRVWKIQEE--SQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~--~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~  342 (454)
                      ..+...+.... +|+++.|+..+.+    +.|.+||+.++  ... .+..+...+..+.+..+..+++...++..+||.+
T Consensus       313 ~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~  391 (741)
T 1yr2_A          313 IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAF  391 (741)
T ss_dssp             ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEE
T ss_pred             cCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence            55555555553 4888887776653    45999999874  333 3344444454555556667778888888777765


Q ss_pred             C-CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE-E---ecCCCcEEEEEcCCCc
Q psy17902        343 L-KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA-S---GSYDGCVKLWKITPKR  397 (454)
Q Consensus       343 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~---~~~dg~v~iwd~~~~~  397 (454)
                      . .+.....+...        ....+..+.++|+++.|+ +   ....++|++||+.+++
T Consensus       392 ~~~g~~~~~l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~  443 (741)
T 1yr2_A          392 DLDGKPAGAVSLP--------GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK  443 (741)
T ss_dssp             ETTSCEEEECBCS--------SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred             eCCCCceeeccCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence            4 34444443321        133488899999988555 2   2335789999998775

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.62  E-value=7.3e-13  Score=119.01  Aligned_cols=241  Identities=8%  Similarity=0.042  Sum_probs=160.4

Q ss_pred             CCCCeEEEEEcCCCCEEEE-------EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCC
Q psy17902        141 HRASITCIAVTSDSKHVYS-------ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNS  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg  212 (454)
                      .-....+++|+++++++++       +..++.|.+|+..++....... . ...++...+.+++++++ ++++++.. .+
T Consensus        16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~-~~~~~~~~~~~i~~~~~~g~l~v~~~-~~   92 (314)
T 1pjx_A           16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-P-EVNGYGGIPAGCQCDRDANQLFVADM-RL   92 (314)
T ss_dssp             CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-C-EETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred             cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-c-ccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence            4445789999999988877       5778999999987766532211 0 00123356889999999 77555554 44


Q ss_pred             cEEEEeCCCccEEee-cc-----cCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCceeEEEeec
Q psy17902        213 NIKLWSSSLEHLHTF-TG-----HKAPITGLAISFECDTLYSSSND---------------RSIKVWNIEDRAYVETLFG  271 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~  271 (454)
                      .|.+|+.. ..+..+ ..     ....+.+++++++++++++...+               +.|..|+.. ++... +..
T Consensus        93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~  169 (314)
T 1pjx_A           93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDT  169 (314)
T ss_dssp             EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEE
T ss_pred             CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ecc
Confidence            78899987 444433 21     12458899999999877776554               568888876 54433 223


Q ss_pred             cCCceeEEEee----cCCCEEEEe-eCCCcEEEeecc-CCeEE------EEcccc-CCeEEEEe-cCCCEEEEEeCCCCE
Q psy17902        272 HQSAITSLDIL----AKNRVISSG-GTDKSVRVWKIQ-EESQL------VFNGHS-RGIDMTRR-VNDQQFITCGEDGTL  337 (454)
Q Consensus       272 ~~~~v~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~------~~~~~~-~~i~~~~~-~~~~~l~~~~~dg~i  337 (454)
                      +......++|+    |+++.|+.+ ..++.|.+|++. .+...      .+..+. .....+.+ +++..+++...++.|
T Consensus       170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i  249 (314)
T 1pjx_A          170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI  249 (314)
T ss_dssp             EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred             CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence            44456889999    999655444 567899999987 34321      122221 23344444 456666666678899


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCC
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPK  396 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~  396 (454)
                      .+||..++..+..+...         ...+.+++|+|+++.| ++...++.|..|++...
T Consensus       250 ~~~d~~~g~~~~~~~~~---------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~  300 (314)
T 1pjx_A          250 EVFGPDGGQPKMRIRCP---------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN  300 (314)
T ss_dssp             EEECTTCBSCSEEEECS---------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred             EEEcCCCCcEeEEEeCC---------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence            99999877766665432         2338999999999944 55556688999998643

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.61  E-value=3.3e-14  Score=129.11  Aligned_cols=173  Identities=12%  Similarity=0.026  Sum_probs=130.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce---------e-EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRA---------Y-VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                      +++.+++++...++++|+.++ +.+|++....         . ......+.. |+.++|  ++++|+++ .++.|++||+
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv  113 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL  113 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence            689999999999999999986 6669875433         1 111224566 999999  88999988 8899999999


Q ss_pred             cCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        303 QEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       303 ~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                      ++.... ....+...+..+.+... .+++++.||.|.+||+..+......             ..|+|++|||.|  ++.
T Consensus       114 ~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~-------------~~Vs~v~WSpkG--~~v  177 (388)
T 1xip_A          114 EELSEFRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA-------------QNVTSFDVTNSQ--LAV  177 (388)
T ss_dssp             SSTTCEEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEEEE-------------ESEEEEEECSSE--EEE
T ss_pred             hhhhccCccceeecceeeEEecCC-CEEEEECCCCEEEEEccCCcccccc-------------CCceEEEEcCCc--eEE
Confidence            875543 44455556665554444 3888999999999999877654321             129999999999  778


Q ss_pred             ecCCCcEEEEEcCCCce--eeEecc-------CCCceeeeEEEEcCCCCEEEEE
Q psy17902        382 GSYDGCVKLWKITPKRT--LEFLQD-------IPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       382 ~~~dg~v~iwd~~~~~~--~~~~~~-------~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      |..||++++|+...+..  ...+..       ..|...|.+++|.+++.+|++-
T Consensus       178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y  231 (388)
T 1xip_A          178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF  231 (388)
T ss_dssp             EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence            99999999999877664  445521       1256889999999999998874

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.58  E-value=2.6e-12  Score=119.45  Aligned_cols=245  Identities=7%  Similarity=0.041  Sum_probs=161.5

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVE  267 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~  267 (454)
                      ......|+|+++++++++...++.|++||..+..+..+........ ++|+++++.|+++..++  .|.+|+...+....
T Consensus       130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~  208 (409)
T 3hrp_A          130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT  208 (409)
T ss_dssp             CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred             cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence            3468899999999988888878999999997655555443333344 99999999999988766  79999987654433


Q ss_pred             Ee----eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE-----ccccC--Ce-EEEEecCCCE-EEEEeCC
Q psy17902        268 TL----FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF-----NGHSR--GI-DMTRRVNDQQ-FITCGED  334 (454)
Q Consensus       268 ~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~--~i-~~~~~~~~~~-l~~~~~d  334 (454)
                      .+    ......+.+++++|++..|+.+..++.|+.||..++....+     .+...  +. ...+.+.+.. +++...+
T Consensus       209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~  288 (409)
T 3hrp_A          209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL  288 (409)
T ss_dssp             EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred             EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence            33    21456678999999555555577788999999987765543     11111  12 3444443444 4555577


Q ss_pred             CCEEEEecCCCccceeeecccCCCCC------CCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcCCCceeeEeccCC-
Q psy17902        335 GTLSLWSILKKVPTHTIPVAHGYDSS------SSEPNWITSVACLHNSDLVASGS-YDGCVKLWKITPKRTLEFLQDIP-  406 (454)
Q Consensus       335 g~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~-  406 (454)
                      +.|+.|+....  +..+.........      ...-.....++++|+|+++++-+ .++.|+.|++.++.......... 
T Consensus       289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~  366 (409)
T 3hrp_A          289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDV  366 (409)
T ss_dssp             TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTC
T ss_pred             CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCC
Confidence            89999987643  2222111100000      00123488999999999888887 88999999987775433222100 


Q ss_pred             -----------CceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        407 -----------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       407 -----------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                                 .-.....++++|+|..+++- ..+++|+.+..
T Consensus       367 ~g~~~g~~~~~~~~~P~giavd~~g~lyVad-~~n~~Ir~i~~  408 (409)
T 3hrp_A          367 ASQIDGTPLEATFNYPYDICYDGEGGYWIAE-AWGKAIRKYAV  408 (409)
T ss_dssp             BSCCCBSTTTCCBSSEEEEEECSSSEEEEEE-STTCEEEEEEE
T ss_pred             CCcCCCChhceEeCCceEEEEcCCCCEEEEE-CCCCeEEEEEe
Confidence                       02357899999997655554 67778876653

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.58  E-value=5.3e-12  Score=112.42  Aligned_cols=228  Identities=8%  Similarity=0.025  Sum_probs=150.1

Q ss_pred             ceEEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        192 PILALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       192 ~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      -.-+..|+++ +.++++...++.|..|+..+.....+. ....+.++++++++++++ +. ++.|.+||..+++......
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~   90 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLAT   90 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEE
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEe
Confidence            4567889985 556667677899999999655554443 457899999999999544 44 5679999998876543222


Q ss_pred             c----cCCceeEEEeecCCCEEEEeeCC---------CcEEEeeccC-CeEEEEccccCCeEEEEe-cCCCEE-EEEeCC
Q psy17902        271 G----HQSAITSLDILAKNRVISSGGTD---------KSVRVWKIQE-ESQLVFNGHSRGIDMTRR-VNDQQF-ITCGED  334 (454)
Q Consensus       271 ~----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~-~~~~~~~~~~~~i~~~~~-~~~~~l-~~~~~d  334 (454)
                      .    ....++.++++|+|+++++....         ....+|.+.. +..............+.+ +++..| ++.+.+
T Consensus        91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~  170 (297)
T 3g4e_A           91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS  170 (297)
T ss_dssp             CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred             cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence            1    12457889999999977654321         2234444432 233322222223344444 456555 455567


Q ss_pred             CCEEEEec--CCCccce--eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902        335 GTLSLWSI--LKKVPTH--TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV  410 (454)
Q Consensus       335 g~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  410 (454)
                      +.|.+|++  .++....  .+.....      ....+..++++++|++.++....+.|.+||..+++.+..+..  +...
T Consensus       171 ~~i~~~~~d~~~G~~~~~~~~~~~~~------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~--p~~~  242 (297)
T 3g4e_A          171 YSVDAFDYDLQTGQISNRRSVYKLEK------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL--PVDK  242 (297)
T ss_dssp             TEEEEEEECTTTCCEEEEEEEEECCG------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC--SSSB
T ss_pred             CcEEEEeccCCCCcccCcEEEEECCC------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC--CCCC
Confidence            89999987  3443211  1111000      123378899999999888877788899999988988888775  4457


Q ss_pred             eeEEEEc-CCCCEEEEEecCC
Q psy17902        411 INSLVFT-SDHKHLVAGIGTE  430 (454)
Q Consensus       411 v~~l~~s-~d~~~l~~~~~~d  430 (454)
                      +++++|. |+++.|++++..+
T Consensus       243 ~t~~~f~g~d~~~L~vt~~~~  263 (297)
T 3g4e_A          243 TTSCCFGGKNYSEMYVTCARD  263 (297)
T ss_dssp             EEEEEEESGGGCEEEEEEBCT
T ss_pred             ceEEEEeCCCCCEEEEEcCCc
Confidence            8999998 8999888775543

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.58  E-value=1.2e-11  Score=113.45  Aligned_cols=241  Identities=8%  Similarity=-0.052  Sum_probs=160.7

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902        147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN--NSN  213 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~  213 (454)
                      .++|+|||++|+++.          .++.|.+||..+.+....+... ............++|+|+|++|++++.  ++.
T Consensus        70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~  149 (373)
T 2mad_H           70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA  149 (373)
T ss_pred             CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence            899999999999986          3678999999988777665532 000001123458999999999998874  478


Q ss_pred             EEEEeCCCccEEee-cccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEee-----ccCCce-eEEEeecCC
Q psy17902        214 IKLWSSSLEHLHTF-TGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLF-----GHQSAI-TSLDILAKN  285 (454)
Q Consensus       214 v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v-~~~~~~~~~  285 (454)
                      |.++| ....+... .....   ++.+.|++ ..+++.+.||.+.++|. +++.+....     ....++ ....+.+++
T Consensus       150 v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~  224 (373)
T 2mad_H          150 VGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS  224 (373)
T ss_pred             EEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence            99999 66554332 22222   24455554 45667778999999999 777653321     111221 234556666


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE---EEcc----------ccCCeE-EEEecCCCEEEEEeC----------CCCEEEEe
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL---VFNG----------HSRGID-MTRRVNDQQFITCGE----------DGTLSLWS  341 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~---~~~~----------~~~~i~-~~~~~~~~~l~~~~~----------dg~i~iwd  341 (454)
                      ..++..+..+.+.+.|+......   .+..          ...... ....+++..++++..          .+.|.++|
T Consensus       225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID  304 (373)
T 2mad_H          225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT  304 (373)
T ss_pred             CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence            54444457789999999765322   1110          011122 233445566666543          35799999


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEe
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~  402 (454)
                      +.+.+.+.+++...          ...+++|+|+|+ +++++. .++.|.+||+.+++.+..+
T Consensus       305 ~~t~~vv~~i~~g~----------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i  357 (373)
T 2mad_H          305 GLVGQTSSQISLGH----------DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST  357 (373)
T ss_pred             CCCCEEEEEEECCC----------CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence            99999999887543          278899999999 777777 5899999999999888774

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.57  E-value=2.6e-12  Score=119.50  Aligned_cols=242  Identities=12%  Similarity=0.044  Sum_probs=160.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--cEEEEeCC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--NIKLWSSS  220 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~~  220 (454)
                      .....|+|+++++++++...++.|++||..++........       ..... ++|+++++.|+++..++  .|.+|+..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-------~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~  202 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-------FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA  202 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-------CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-------CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence            4688999999999778777789999999987665433221       12233 89999999998888766  78888873


Q ss_pred             -CccEEee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE----eeccCCce--eEEEeecC-CCEE
Q psy17902        221 -LEHLHTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET----LFGHQSAI--TSLDILAK-NRVI  288 (454)
Q Consensus       221 -~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~~~~-~~~l  288 (454)
                       ......+    ......+.+++++|++..|+++..++.|+.||..++.....    ..++...-  ..++|+|+ +.++
T Consensus       203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly  282 (409)
T 3hrp_A          203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY  282 (409)
T ss_dssp             GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred             CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence             3222333    22456678899999655666677789999999987754322    22222222  38999995 5666


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEcccc---------------CCeEEEE-ecCCCEEEEEe-CCCCEEEEecCCCccceee
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGHS---------------RGIDMTR-RVNDQQFITCG-EDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~~---------------~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~  351 (454)
                      ++-..++.|+.|+.... ...+.++.               .....+. .+++.++++-+ .++.|+.|++.++......
T Consensus       283 v~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~  361 (409)
T 3hrp_A          283 MSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA  361 (409)
T ss_dssp             EEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred             EEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence            66667889999998754 33333321               1123344 44566666766 7899999998776533222


Q ss_pred             ecc--cCCC---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        352 PVA--HGYD---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       352 ~~~--~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ...  .+..   .....-.....++++++|.++++-..++.|+.+++
T Consensus       362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred             CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence            110  0000   00111245899999999988888888889988875

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.54  E-value=4e-12  Score=115.65  Aligned_cols=272  Identities=10%  Similarity=0.072  Sum_probs=169.1

Q ss_pred             CCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC-----CCcE
Q psy17902        143 ASITCIAVTSDSKHVYSAC--KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN-----NSNI  214 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~v  214 (454)
                      ..+..++++|+|+++++..  .++.++||.+.++.. ..++.. .....+...+..++++++++++++-..     ++.|
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i   95 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL   95 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence            5689999999999988864  234356666554432 222110 112245668999999999986665543     5789


Q ss_pred             EEEeCC-CccEEeecc------cCCCeEEEEEcCCCCEEEEE-e---CCCcEEEEeCCCceeEEEeeccCCcee-EEEee
Q psy17902        215 KLWSSS-LEHLHTFTG------HKAPITGLAISFECDTLYSS-S---NDRSIKVWNIEDRAYVETLFGHQSAIT-SLDIL  282 (454)
Q Consensus       215 ~vw~~~-~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~-~---~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~  282 (454)
                      .+||+. ++.+..+..      +...+..+++++++..++.+ .   .++.|.+||+.+++....+.+|..... ...+.
T Consensus        96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~  175 (343)
T 2qe8_A           96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV  175 (343)
T ss_dssp             EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred             EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence            999994 554555432      22456899999865555444 4   578999999998887766654432111 14455


Q ss_pred             cCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeE-EEEecCCCEEEEEeCCC-CEEEEecC---CCc-----cceeee
Q psy17902        283 AKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGID-MTRRVNDQQFITCGEDG-TLSLWSIL---KKV-----PTHTIP  352 (454)
Q Consensus       283 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~~dg-~i~iwd~~---~~~-----~~~~~~  352 (454)
                      +++..+.+.+.++.+..|..             ... ..+.+++..|+.+...+ .|..++..   .+.     ....+.
T Consensus       176 ~~g~~~~~~~~~g~~~~~~~-------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T 2qe8_A          176 IDGVPVQIGQPDGTVIRPHL-------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE  242 (343)
T ss_dssp             ETTEECBEECTTSCEECCCC-------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE
T ss_pred             ECCEEEEeccCCCceeceec-------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE
Confidence            67777777778888776642             122 33344566777776655 44444421   110     000010


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                      .. +      +......++++++|.++++...++.|.+||..+++...... .+....+++++|.++|.+++++ +..+.
T Consensus       243 ~~-g------~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~-~~~~~~p~~va~~~~g~l~v~~-~~~~~  313 (343)
T 2qe8_A          243 RY-S------EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT-DEKLSWTDSFNFGSDGYLYFDC-NQLHH  313 (343)
T ss_dssp             EE-E------ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE-CGGGSCEEEEEECTTSCEEEEE-CCGGG
T ss_pred             ec-c------cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE-CCceecCCeeEECCCCcEEEEe-Ccccc
Confidence            00 0      01125668999999999999999999999985565433332 2234568899999999877777 45566


Q ss_pred             eeeee
Q psy17902        433 FGRWK  437 (454)
Q Consensus       433 i~~W~  437 (454)
                      +.+|.
T Consensus       314 ~~~f~  318 (343)
T 2qe8_A          314 SAPLN  318 (343)
T ss_dssp             SGGGB
T ss_pred             ccccc
Confidence            65554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.54  E-value=3.1e-12  Score=114.40  Aligned_cols=223  Identities=9%  Similarity=0.012  Sum_probs=148.3

Q ss_pred             CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      +........|+|+++ +++++..++.|..|+.. +.. ..+.      .....+..++++++|+++++...++.|.+|+.
T Consensus        43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~------~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~  114 (305)
T 3dr2_A           43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLL------DATAFTNGNAVDAQQRLVHCEHGRRAITRSDA  114 (305)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEE------ESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred             CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEe------CCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence            556688999999998 66677778999999884 332 2221      13446889999999997777666688999998


Q ss_pred             CCccEEeeccc-----CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCceeEEEeeccCCcee
Q psy17902        220 SLEHLHTFTGH-----KAPITGLAISFECDTLYS----SSN-------------DRSIKVWNIEDRAYVETLFGHQSAIT  277 (454)
Q Consensus       220 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~v~  277 (454)
                      .+. +..+..+     ...+..+++.++|+++++    |..             .+.|..||..+++.....  ......
T Consensus       115 ~g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~  191 (305)
T 3dr2_A          115 DGQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN  191 (305)
T ss_dssp             TSC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred             CCC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence            644 3332211     134678999999998876    332             256888888766654333  344568


Q ss_pred             EEEeecCCCEEEEeeCC------CcEEEeeccCCeEE---EE-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902        278 SLDILAKNRVISSGGTD------KSVRVWKIQEESQL---VF-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP  347 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~---~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  347 (454)
                      .++|+|+++.|+.+...      +.|.+|++......   .+ .........+.......|.+++.+| |.+|+. .++.
T Consensus       192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~-~g~~  269 (305)
T 3dr2_A          192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDS-DGQL  269 (305)
T ss_dssp             EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECT-TSCE
T ss_pred             ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECC-CCCE
Confidence            89999999977776655      68999998765421   11 1111122223333333355555554 999998 5666


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      +..+....          .+.+++|+|+++.|++++.++
T Consensus       270 ~~~~~~~~----------~~~~~~f~~d~~~L~it~~~~  298 (305)
T 3dr2_A          270 LGHIPTPG----------TASNCTFDQAQQRLFITGGPC  298 (305)
T ss_dssp             EEEEECSS----------CCCEEEECTTSCEEEEEETTE
T ss_pred             EEEEECCC----------ceeEEEEeCCCCEEEEEcCCe
Confidence            66665322          278899999998888877765

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.53  E-value=4.4e-13  Score=121.80  Aligned_cols=178  Identities=11%  Similarity=0.110  Sum_probs=136.1

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeC---C---------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSS---S---------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN  259 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  259 (454)
                      +++.+++++...++++|+.++ +.+|++   .         .+.... ..+.. |+.++|  +++.|+++ .++.|++||
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d  112 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD  112 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence            689999999999999999875 556986   1         122222 23666 999999  88999998 889999999


Q ss_pred             CCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902        260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       260 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                      +.+.........|...+.++.+.+.  .+++++.||.|.+||+..+....   +...+++++|++.+ ++.|..||.+++
T Consensus       113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~  186 (388)
T 1xip_A          113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQS  186 (388)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEEE
T ss_pred             chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEEE
Confidence            9887766666778888888877654  38888999999999999877653   45678899998877 788999999999


Q ss_pred             EecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        340 WSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       340 wd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                      |+......  ..+++..........|...|.++.|.+++.+|++
T Consensus       187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~  230 (388)
T 1xip_A          187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV  230 (388)
T ss_dssp             EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred             EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence            98877664  4555432221111124566999999999998877

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.53  E-value=6.8e-11  Score=105.17  Aligned_cols=234  Identities=7%  Similarity=0.043  Sum_probs=162.7

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE  267 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  267 (454)
                      ...+.++++.++|++.++...++.|.+|+.. ..+..+  ..+...+.++++.+++.++++...++.|..||.. ++...
T Consensus        19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~   96 (300)
T 2qc5_A           19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE   96 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred             CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence            4478899999999988887778999999987 333332  2334678999999999877776667889999988 55432


Q ss_pred             -EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecC
Q psy17902        268 -TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       268 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~  343 (454)
                       .+......+.++++.++++++++...++.|..|+.. +....+  .........+.. +++..+++...++.|.+|+. 
T Consensus        97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-  174 (300)
T 2qc5_A           97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-  174 (300)
T ss_dssp             EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred             ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence             222234678999999999888877668899999987 554433  222334455555 44555555555788999998 


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL  423 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l  423 (454)
                      ++.... +....       ....+..++++++|.+.++....+.|.+|+. ++..... ........+.+++++++|...
T Consensus       175 ~g~~~~-~~~~~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~d~~g~l~  244 (300)
T 2qc5_A          175 TGKLEE-YPLPT-------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIPTPNARPHAITAGKNSEIW  244 (300)
T ss_dssp             TCCEEE-EECSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTCEE
T ss_pred             CCcEEE-eeCCC-------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECCCCCCCceEEEECCCCCEE
Confidence            444332 22211       1234889999999988877777788999998 4443332 211234568899999999865


Q ss_pred             EEEecCCCceeeeee
Q psy17902        424 VAGIGTEHRFGRWKT  438 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~  438 (454)
                      ++. ..++.|.+|+.
T Consensus       245 v~~-~~~~~i~~~~~  258 (300)
T 2qc5_A          245 FTE-WGANQIGRITN  258 (300)
T ss_dssp             EEE-TTTTEEEEECT
T ss_pred             Eec-cCCCeEEEECC
Confidence            555 56788888886

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.52  E-value=2.9e-11  Score=109.08  Aligned_cols=226  Identities=7%  Similarity=-0.096  Sum_probs=147.7

Q ss_pred             ceEEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        192 PILALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       192 ~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      ...+.+|+|+ +.++++...++.|.+|+..+.....+. ....+.+++|+++++++++. .++ |.+||..+++......
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~~~~~~  126 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVLTLHAE  126 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCEEEEEC
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcEEEEee
Confidence            3457789997 556666667889999999655554443 35679999999998766654 444 9999998877543221


Q ss_pred             c----cCCceeEEEeecCCCEEEEeeC------CCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEE-eCCCCEE
Q psy17902        271 G----HQSAITSLDILAKNRVISSGGT------DKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITC-GEDGTLS  338 (454)
Q Consensus       271 ~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~-~~dg~i~  338 (454)
                      .    ....++++.++|+|+++++...      .+.|..++  ++....+.........+.+. +++.++.+ +.++.|.
T Consensus       127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~  204 (326)
T 2ghs_A          127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM  204 (326)
T ss_dssp             SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred             CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence            1    1245889999999987665432      24555555  45444333332334444444 55555444 4678999


Q ss_pred             EEecC--CC-ccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902        339 LWSIL--KK-VPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS  413 (454)
Q Consensus       339 iwd~~--~~-~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~  413 (454)
                      +|++.  ++ ...  ..+....      .....+..++++++|++.++...++.|.+|+. +++.+..+..  ....+++
T Consensus       205 ~~d~~~~~Gl~~~~~~~~~~~~------~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~--~~~~~~~  275 (326)
T 2ghs_A          205 RVPLDARTGLPTGKAEVFIDST------GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV--PGKQTTC  275 (326)
T ss_dssp             EEEBCTTTCCBSSCCEEEEECT------TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--SCSBEEE
T ss_pred             EEEcccccCCcccCceEEEECC------CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC--CCCCcEE
Confidence            99986  44 321  1111100      01233788999999998777766788999998 5666666654  3456999


Q ss_pred             EEEc-CCCCEEEEEecCCC
Q psy17902        414 LVFT-SDHKHLVAGIGTEH  431 (454)
Q Consensus       414 l~~s-~d~~~l~~~~~~d~  431 (454)
                      ++|+ |++..|++++..++
T Consensus       276 ~af~g~d~~~L~vt~~~~~  294 (326)
T 2ghs_A          276 PAFIGPDASRLLVTSAREH  294 (326)
T ss_dssp             EEEESTTSCEEEEEEBCTT
T ss_pred             EEEecCCCCEEEEEecCCC
Confidence            9998 99888877755543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.52  E-value=2.2e-12  Score=128.73  Aligned_cols=240  Identities=11%  Similarity=0.105  Sum_probs=156.1

Q ss_pred             CCCceEEEEEeCCCcEEEEe-----cCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc---------
Q psy17902        189 SYPPILALAVANNNELVASG-----DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS---------  254 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~~l~~~-----~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~---------  254 (454)
                      +...+..++|||||++||.+     +....|++||+.+........+......++|+ |++.|+.++.+..         
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~  205 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART  205 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence            44578899999999998854     33357999999444332222121123567899 9999998887743         


Q ss_pred             ----EEEEeCCCcee----EEEeec-cCCceeEEEeecCCCEEEEeeC----CCcEEEeeccCC--eEEEEccccCCeEE
Q psy17902        255 ----IKVWNIEDRAY----VETLFG-HQSAITSLDILAKNRVISSGGT----DKSVRVWKIQEE--SQLVFNGHSRGIDM  319 (454)
Q Consensus       255 ----i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~i~~  319 (454)
                          |++|++.+...    +..... |...+.++.|+|+|++|+....    ...|+++|+.++  ....+..+......
T Consensus       206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~  285 (693)
T 3iuj_A          206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS  285 (693)
T ss_dssp             CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred             CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence                99999987642    322223 4455788999999998754432    358999999776  34455555555544


Q ss_pred             EEecCCCEEEEEeC----CCCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CC--cEEE
Q psy17902        320 TRRVNDQQFITCGE----DGTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DG--CVKL  390 (454)
Q Consensus       320 ~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~v~i  390 (454)
                      .+.++++.|+..+.    .+.|.++++.++..  ...+...         ...+.  .|+++++.|+.... ++  .|++
T Consensus       286 ~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~---------~~~~~--~~s~~g~~lv~~~~~~g~~~l~~  354 (693)
T 3iuj_A          286 LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE---------RQQVL--TVHSGSGYLFAEYMVDATARVEQ  354 (693)
T ss_dssp             EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC---------CSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred             EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC---------CCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence            45666666655443    36789999987654  2333221         11133  88999987776655 43  6889


Q ss_pred             EEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC---CCceeeeeeeCCC
Q psy17902        391 WKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT---EHRFGRWKTIKGV  442 (454)
Q Consensus       391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~---d~~i~~W~~~~~~  442 (454)
                      |++..+ ....+.. +..+.+..+.++|++..|+.+.+.   -+.|..|+...+.
T Consensus       355 ~d~~g~-~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          355 FDYEGK-RVREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             ECTTSC-EEEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             EECCCC-eeEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            998744 4444432 245567888899999887766332   2678888765543

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.52  E-value=6.1e-13  Score=120.61  Aligned_cols=255  Identities=7%  Similarity=-0.087  Sum_probs=168.8

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCcEEEEeC-CCccEEeeccc---
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSNIKLWSS-SLEHLHTFTGH---  230 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~v~vw~~-~~~~~~~~~~~---  230 (454)
                      .|.++|..+++.+..++.     +. .+  .++++|++++++++.          .++.|.+||+ +.+.+.++...   
T Consensus        47 ~vsvID~~t~~v~~~i~v-----G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~  118 (368)
T 1mda_H           47 ENWVSCAGCGVTLGHSLG-----AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP  118 (368)
T ss_dssp             EEEEEETTTTEEEEEEEE-----CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred             eEEEEECCCCeEEEEEeC-----CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence            888999999999888774     22 34  799999999988886          3688999999 77777776533   


Q ss_pred             ----CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EeCCCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEee
Q psy17902        231 ----KAPITGLAISFECDTLYSSSN--DRSIKV--WNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWK  301 (454)
Q Consensus       231 ----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d  301 (454)
                          ......++++|||++++++..  +..|.+  +|+.+   +..+.. .+.   +.+.|++ ..+++.+.||.+.+.+
T Consensus       119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd  191 (368)
T 1mda_H          119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASD  191 (368)
T ss_dssp             SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEE
T ss_pred             ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEE
Confidence                123567899999999999875  457888  99877   344432 111   2234554 4455667888888888


Q ss_pred             ccC-----CeEEE-----EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeeecccCCC-CCCCCCCcEE
Q psy17902        302 IQE-----ESQLV-----FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIPVAHGYD-SSSSEPNWIT  368 (454)
Q Consensus       302 ~~~-----~~~~~-----~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~~~~~~i~  368 (454)
                      +.+     ++...     +.....+.   ..+++..++..+. +.|.+.|+....  .+..+....... .....+....
T Consensus       192 ~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~  267 (368)
T 1mda_H          192 LAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ  267 (368)
T ss_dssp             CCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred             CccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence            876     32211     00111222   2666677666667 999999986532  222221110000 0000011112


Q ss_pred             EEEEecCCCEEEEecC---------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec-CCCceeeeee
Q psy17902        369 SVACLHNSDLVASGSY---------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG-TEHRFGRWKT  438 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~-~d~~i~~W~~  438 (454)
                      .++++|+++.++++..         ++.+.++|+.+.+.+..+.   .......++|+|||++++++.. .++.|.++|.
T Consensus       268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~---vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~  344 (368)
T 1mda_H          268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDA  344 (368)
T ss_dssp             CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---EEEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred             eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE---CCCCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence            2689999997776533         2356799999998888776   3457899999999997666657 6999999998


Q ss_pred             eCC
Q psy17902        439 IKG  441 (454)
Q Consensus       439 ~~~  441 (454)
                      .+.
T Consensus       345 ~t~  347 (368)
T 1mda_H          345 ASD  347 (368)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            765

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.52  E-value=4.4e-12  Score=116.88  Aligned_cols=242  Identities=8%  Similarity=0.004  Sum_probs=165.4

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902        147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN--NSN  213 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~  213 (454)
                      .++++||+++|+++.          .++.|.++|..+.+....+... ............++|+|+|++|+++..  ++.
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~  201 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA  201 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence            799999999998886          3678999999999887766532 000001123457899999999999874  578


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEE----eeccCCce-eEEEeecCCC
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVET----LFGHQSAI-TSLDILAKNR  286 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v-~~~~~~~~~~  286 (454)
                      |.+.|+ +.+.+..+..-.  .  ....|++ ..+++.+.||.+.+.++.+++....    +.....++ ..+.+.+++.
T Consensus       202 VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~  277 (426)
T 3c75_H          202 VGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG  277 (426)
T ss_dssp             EEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred             EEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence            999999 556666655321  1  2333433 5666777888888888865554422    11111121 2356788887


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEEEcc-------------ccCCe-EEEEecCCCEEEEEeC----------CCCEEEEec
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLVFNG-------------HSRGI-DMTRRVNDQQFITCGE----------DGTLSLWSI  342 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~~~~-------------~~~~i-~~~~~~~~~~l~~~~~----------dg~i~iwd~  342 (454)
                      .++..+..+.|.+.|+..........             ..... .....+++.++++...          .+.|.++|+
T Consensus       278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~  357 (426)
T 3c75_H          278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA  357 (426)
T ss_dssp             EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred             EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence            77666778999999997654331110             01111 1344556666555432          357999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEe
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~  402 (454)
                      .+.+.+.+++....          ...+.|+|+|+ ++++.. .++.|.++|+.+++.+..+
T Consensus       358 ~T~kvv~~I~vg~~----------P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI  409 (426)
T 3c75_H          358 ETGERINKIELGHE----------IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV  409 (426)
T ss_dssp             TTCCEEEEEEEEEE----------ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred             CCCeEEEEEECCCC----------cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence            99999999986542          78899999999 888887 5899999999999998887

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.51  E-value=6.7e-11  Score=105.24  Aligned_cols=223  Identities=9%  Similarity=0.028  Sum_probs=146.4

Q ss_pred             CCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      +..-..+..|+|++ .++++...++.|..||..++... .+.       ....+.+++++++|+++++.  ++.|.+||.
T Consensus        11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-------~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~   80 (297)
T 3g4e_A           11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-------MDAPVSSVALRQSGGYVATI--GTKFCALNW   80 (297)
T ss_dssp             CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-------CSSCEEEEEEBTTSSEEEEE--TTEEEEEET
T ss_pred             CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-------CCCceEEEEECCCCCEEEEE--CCeEEEEEC
Confidence            44556789999964 55666667899999999876542 121       23478999999999965554  467999998


Q ss_pred             CCccEEeecc-----cCCCeEEEEEcCCCCEEEEEeC-----------CCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        220 SLEHLHTFTG-----HKAPITGLAISFECDTLYSSSN-----------DRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       220 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      ....+..+..     ....++.++++|+|+++++...           .+.|..++.. +... .+..+....+.++|+|
T Consensus        81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~sp  158 (297)
T 3g4e_A           81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSL  158 (297)
T ss_dssp             TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECT
T ss_pred             CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcC
Confidence            5444433322     1235788999999986665432           2344445443 3332 2333445568999999


Q ss_pred             CCCEE-EEeeCCCcEEEeec--cCCeEE------EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        284 KNRVI-SSGGTDKSVRVWKI--QEESQL------VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       284 ~~~~l-~~~~~dg~i~i~d~--~~~~~~------~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      +++.| ++.+.++.|.+|++  .++...      .+.........+.. ++++++++....+.|.+||..+++.+..+..
T Consensus       159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~  238 (297)
T 3g4e_A          159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL  238 (297)
T ss_dssp             TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred             CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence            99866 45556789999987  344322      11222233344444 4566666666778899999988888887765


Q ss_pred             ccCCCCCCCCCCcEEEEEEe-cCCCEEEEecC
Q psy17902        354 AHGYDSSSSEPNWITSVACL-HNSDLVASGSY  384 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~  384 (454)
                      ..         ..+++++|. |+++.|++++.
T Consensus       239 p~---------~~~t~~~f~g~d~~~L~vt~~  261 (297)
T 3g4e_A          239 PV---------DKTTSCCFGGKNYSEMYVTCA  261 (297)
T ss_dssp             SS---------SBEEEEEEESGGGCEEEEEEB
T ss_pred             CC---------CCceEEEEeCCCCCEEEEEcC
Confidence            42         239999998 88886655543

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.49  E-value=2.6e-12  Score=128.24  Aligned_cols=238  Identities=9%  Similarity=0.028  Sum_probs=155.6

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC---
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-----KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS---  212 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---  212 (454)
                      |...|..++|||||++||.+.     ....|++||+.+++......       .......++|+ |++.|+.++.+.   
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-------~~~k~~~~~Ws-Dg~~l~y~~~~~~~~  198 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-------KDVKFSGISWL-GNEGFFYSSYDKPDG  198 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-------EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-------CCceeccEEEe-CCCEEEEEEecCccc
Confidence            666789999999999988543     22579999999987543211       11113567899 999998887764   


Q ss_pred             ----------cEEEEeCCC-c----cEEeecc-cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEeCCCce-eEEEeec
Q psy17902        213 ----------NIKLWSSSL-E----HLHTFTG-HKAPITGLAISFECDTLYSSSN----DRSIKVWNIEDRA-YVETLFG  271 (454)
Q Consensus       213 ----------~v~vw~~~~-~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~  271 (454)
                                .|++|++.. .    .+..... |...+.++.|+|+|++|+....    .+.|+++|+.++. ....+..
T Consensus       199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~  278 (693)
T 3iuj_A          199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG  278 (693)
T ss_dssp             ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred             ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence                      399999832 2    2223333 4556788999999998865442    3589999997763 3445555


Q ss_pred             cCCceeEEEeecCCCEE-EEeeCC---CcEEEeeccCCeE---EEEccccCCeEEEEecCCCEEEEEeC-CC--CEEEEe
Q psy17902        272 HQSAITSLDILAKNRVI-SSGGTD---KSVRVWKIQEESQ---LVFNGHSRGIDMTRRVNDQQFITCGE-DG--TLSLWS  341 (454)
Q Consensus       272 ~~~~v~~~~~~~~~~~l-~~~~~d---g~i~i~d~~~~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~-dg--~i~iwd  341 (454)
                      +....... +++++..| +++..+   +.|..+++.++..   ..+..+...+. .+.+.++.|+.... ++  .|++|+
T Consensus       279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d  356 (693)
T 3iuj_A          279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFD  356 (693)
T ss_dssp             SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred             CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEE
Confidence            66555554 55666554 444333   5799999987654   34444544444 55566777766654 44  688898


Q ss_pred             cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC----CcEEEEEcCCCc
Q psy17902        342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD----GCVKLWKITPKR  397 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~~  397 (454)
                      +..+ ....+...        ....+..+.+++++..|+....+    ++|..||+.+++
T Consensus       357 ~~g~-~~~~l~~p--------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~  407 (693)
T 3iuj_A          357 YEGK-RVREVALP--------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA  407 (693)
T ss_dssp             TTSC-EEEEECCS--------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred             CCCC-eeEEeecC--------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence            8744 33333321        12337778888888865554443    789999987764

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.49  E-value=1.9e-11  Score=109.21  Aligned_cols=222  Identities=11%  Similarity=0.020  Sum_probs=147.7

Q ss_pred             CCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        190 YPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       190 ~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      ........|+++++ +++++..++.|..|+..+. ...+..+...+.+++++++|+++++...++.|.+|+.. ++.. .
T Consensus        44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~  120 (305)
T 3dr2_A           44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-L  120 (305)
T ss_dssp             CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E
T ss_pred             CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-E
Confidence            33567889999998 6677777899999998544 55566667789999999999866665556789999986 5432 2


Q ss_pred             eecc-----CCceeEEEeecCCCEEEE----eeC-------------CCcEEEeeccCCeEEEEccccCCeEEEE-ecCC
Q psy17902        269 LFGH-----QSAITSLDILAKNRVISS----GGT-------------DKSVRVWKIQEESQLVFNGHSRGIDMTR-RVND  325 (454)
Q Consensus       269 ~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~  325 (454)
                      +..+     ...++.++++++|++.++    |..             .+.|+.||..++....+. .......+. .+++
T Consensus       121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg  199 (305)
T 3dr2_A          121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE  199 (305)
T ss_dssp             EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTS
T ss_pred             EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC
Confidence            2211     134678999999998886    332             256788887666554333 333333344 4556


Q ss_pred             CEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee
Q psy17902        326 QQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       326 ~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  399 (454)
                      ..|+.+...      +.|.+|++.... +.........     .......++++++|++.+ ++.+| |.+|+. .++.+
T Consensus       200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-----~~~~pdgi~~d~~G~lwv-~~~~g-v~~~~~-~g~~~  270 (305)
T 3dr2_A          200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-----PDGLPDGFCVDRGGWLWS-SSGTG-VCVFDS-DGQLL  270 (305)
T ss_dssp             SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-----SSSCCCSEEECTTSCEEE-CCSSE-EEEECT-TSCEE
T ss_pred             CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-----CCCCCCeEEECCCCCEEE-ecCCc-EEEECC-CCCEE
Confidence            667666654      689999987554 2211111100     112245688999999544 44554 999997 46677


Q ss_pred             eEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        400 EFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       400 ~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      ..+..  .. .+.+++|+|+++.|++++
T Consensus       271 ~~~~~--~~-~~~~~~f~~d~~~L~it~  295 (305)
T 3dr2_A          271 GHIPT--PG-TASNCTFDQAQQRLFITG  295 (305)
T ss_dssp             EEEEC--SS-CCCEEEECTTSCEEEEEE
T ss_pred             EEEEC--CC-ceeEEEEeCCCCEEEEEc
Confidence            66664  22 588999999999888873

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.45  E-value=1.7e-10  Score=106.44  Aligned_cols=267  Identities=13%  Similarity=0.111  Sum_probs=170.4

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecc
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTG  229 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~  229 (454)
                      +..|++++.++.|..+|..+++............   .....+.+... .++..+++++.++.|..+|. +++.+.....
T Consensus        53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~  131 (376)
T 3q7m_A           53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGSEKAQVYALNTSDGTVAWQTKV  131 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence            5688888889999999999988876554311100   00122322222 23456777888899999998 6777766654


Q ss_pred             cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----eEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902        230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI-----TSLDILAKNRVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~i~d~~~  304 (454)
                      ...........  +..+++++.++.|..+|..+++.+..+.......     ......  +..+++++.++.|..+|..+
T Consensus       132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~t  207 (376)
T 3q7m_A          132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQ  207 (376)
T ss_dssp             SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTT
T ss_pred             CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCC
Confidence            33222222222  4578888899999999999998887765332211     122222  45677788899999999998


Q ss_pred             CeEE-EEccccC-C---------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        305 ESQL-VFNGHSR-G---------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       305 ~~~~-~~~~~~~-~---------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      ++.. ....... .         +.......++.+++++.++.|..+|..+++.+.......           ...+.. 
T Consensus       208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-----------~~~~~~-  275 (376)
T 3q7m_A          208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-----------VNDFIV-  275 (376)
T ss_dssp             CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-----------EEEEEE-
T ss_pred             CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-----------CCCceE-
Confidence            8877 2221110 0         111111236778888899999999999998877665321           344444 


Q ss_pred             cCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                       ++..|++++.+|.|..+|..+++.+-..... ....+.+....  +..|+++ +.+|.|.+++..++.
T Consensus       276 -~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~--~~~l~v~-~~~g~l~~~d~~tG~  339 (376)
T 3q7m_A          276 -DGNRIYLVDQNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLY--NGNLVVG-DSEGYLHWINVEDGR  339 (376)
T ss_dssp             -ETTEEEEEETTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEE--TTEEEEE-CTTSEEEEEETTTCC
T ss_pred             -ECCEEEEEcCCCeEEEEECCCCcEEEeeccc-CCCcccCCEEE--CCEEEEE-eCCCeEEEEECCCCc
Confidence             3567888888999999999999876555421 11223333332  4567777 678889888876653

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.43  E-value=2.8e-15  Score=137.69  Aligned_cols=255  Identities=9%  Similarity=-0.009  Sum_probs=139.0

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      ++..|++++.||.|+.||..+++....+..        ..+.+..+..++..+++++.||.|+.||. +++.+..+..+.
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~   79 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI   79 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence            568999999999999999999998876642        23334445567778888889999999999 666665554332


Q ss_pred             CC-eE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902        232 AP-IT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-  308 (454)
Q Consensus       232 ~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-  308 (454)
                      .. +. +..+. .+..+++++.++.|+.||..+|+.+..+..+.    ...++|++..+++++.++.|+.||..+++.. 
T Consensus        80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W  154 (369)
T 2hz6_A           80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW  154 (369)
T ss_dssp             HHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred             ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence            11 10 00111 34578888889999999999999887775443    2345678888999999999999999988765 


Q ss_pred             EEccccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE----E
Q psy17902        309 VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV----A  380 (454)
Q Consensus       309 ~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l----~  380 (454)
                      .+....  ........    ++.+++++.+|.|+.||..+++.+........         .+....++++|...    +
T Consensus       155 ~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~p---------v~~~~~~~~dg~~~v~~~~  223 (369)
T 2hz6_A          155 NATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASP---------VVAFYVWQREGLRKVMHIN  223 (369)
T ss_dssp             EEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSC---------EEEEEECTTSSCEEECCEE
T ss_pred             eEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCc---------eEEEEEecCCceEecccee
Confidence            322111  01111111    25678889999999999999998877763221         13334455555421    1


Q ss_pred             EecCCCcEEEEEcCCCc----eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        381 SGSYDGCVKLWKITPKR----TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .+  ++.++.+|..+|+    .+-.+..   .+.+.+..  -.+..|+++ +.+|.|+.++..
T Consensus       224 ~~--~~~l~~ld~~tG~~~~~~~W~~~~---~~~~~sp~--~~~g~lyv~-~~~G~l~al~~~  278 (369)
T 2hz6_A          224 VA--VETLRYLTFMSGEVGRITKWKYPF---PKETEAKS--KLTPTLYVG-KYSTSLYASPSM  278 (369)
T ss_dssp             EE--HHHHHHHHHHHHHHHHHHTSCCCC---CCHHHHHH--HSEEEECBE-ECSSCEECCEEE
T ss_pred             ec--ccceeeeehhcCCcccceeeeecc---Cccccccc--cccceEEEe-cccCCEEecCcc
Confidence            22  3456666766555    3322221   11111111  123455556 567888777765

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.42  E-value=3.7e-10  Score=101.83  Aligned_cols=218  Identities=10%  Similarity=-0.032  Sum_probs=140.3

Q ss_pred             CeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902        144 SITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~  222 (454)
                      ...+.+|+|++ .++++...++.|..|+..++.... +.       ....+.+++|+++|+++++. . ..|.+||....
T Consensus        50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-------~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g  119 (326)
T 2ghs_A           50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-------LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATG  119 (326)
T ss_dssp             BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-------CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTC
T ss_pred             CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-------CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCC
Confidence            45788999974 456666678899999998765432 11       22468999999999877765 3 34999998444


Q ss_pred             cEEeeccc-----CCCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902        223 HLHTFTGH-----KAPITGLAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       223 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      .+..+...     ...+.+++++|+|+++++...      .+.|..++  +++.. .+..+......++|+|+++.|+.+
T Consensus       120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~  196 (326)
T 2ghs_A          120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFV  196 (326)
T ss_dssp             CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEE
T ss_pred             cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEE
Confidence            44333221     235889999999987665432      25566666  45433 232333456889999999866544


Q ss_pred             -eCCCcEEEeecc--CC-eE-----E-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        292 -GTDKSVRVWKIQ--EE-SQ-----L-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       292 -~~dg~i~i~d~~--~~-~~-----~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                       +.++.|.+|++.  ++ ..     . .+.........+... ++.++++...++.|.+|+. +++.+..+....     
T Consensus       197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~-----  270 (326)
T 2ghs_A          197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG-----  270 (326)
T ss_dssp             ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC-----
T ss_pred             ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC-----
Confidence             457899999986  44 21     1 111122233444444 4555555556788999998 566655554322     


Q ss_pred             CCCCCcEEEEEEe-cCCCEEEEecC
Q psy17902        361 SSEPNWITSVACL-HNSDLVASGSY  384 (454)
Q Consensus       361 ~~~~~~i~~~~~s-~~~~~l~~~~~  384 (454)
                          ..+++++|+ ++++.|++++.
T Consensus       271 ----~~~~~~af~g~d~~~L~vt~~  291 (326)
T 2ghs_A          271 ----KQTTCPAFIGPDASRLLVTSA  291 (326)
T ss_dssp             ----SBEEEEEEESTTSCEEEEEEB
T ss_pred             ----CCcEEEEEecCCCCEEEEEec
Confidence                238999998 88876655543

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.41  E-value=1.5e-11  Score=121.65  Aligned_cols=280  Identities=10%  Similarity=0.055  Sum_probs=184.5

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC----C-CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS----Y-PPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~  227 (454)
                      +..|++++.++.|..+|..+++.+............    . .....+++  .+..|++++.++.|..+|. +++.+..+
T Consensus        77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  154 (677)
T 1kb0_A           77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ  154 (677)
T ss_dssp             TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence            467888888899999999999988776542211000    0 00112233  3557888888999999999 78888777


Q ss_pred             ccc-C----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCc--------------------
Q psy17902        228 TGH-K----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSA--------------------  275 (454)
Q Consensus       228 ~~~-~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~--------------------  275 (454)
                      ..+ .    ..+.+ ...  .+..+++++.      +|.|+.||..+++.+..+......                    
T Consensus       155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~  232 (677)
T 1kb0_A          155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS  232 (677)
T ss_dssp             ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred             cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence            654 1    11211 111  2345565543      689999999999988776532211                    


Q ss_pred             ------------eeEEEeecCCCEEEEeeCCC-------------------cEEEeeccCCeEE-EEcc--c--------
Q psy17902        276 ------------ITSLDILAKNRVISSGGTDK-------------------SVRVWKIQEESQL-VFNG--H--------  313 (454)
Q Consensus       276 ------------v~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~-~~~~--~--------  313 (454)
                                  ...++++|++.+++.+..++                   .|..+|..+++.. .+..  |        
T Consensus       233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~  312 (677)
T 1kb0_A          233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST  312 (677)
T ss_dssp             GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred             CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence                        13578888888888877664                   4999999999887 3332  2        


Q ss_pred             cCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCccceeeecccCC---------------------------CCCCCC
Q psy17902        314 SRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGY---------------------------DSSSSE  363 (454)
Q Consensus       314 ~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------------------~~~~~~  363 (454)
                      ..++..-...++   ..++.++.+|.|+++|..+++.+..+......                           ....+.
T Consensus       313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~  392 (677)
T 1kb0_A          313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA  392 (677)
T ss_dssp             SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred             CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence            112222112244   57888999999999999999988776543210                           000000


Q ss_pred             CCcEEEEEEecCCCEEEEecC-------------------------------------------CCcEEEEEcCCCceee
Q psy17902        364 PNWITSVACLHNSDLVASGSY-------------------------------------------DGCVKLWKITPKRTLE  400 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~-------------------------------------------dg~v~iwd~~~~~~~~  400 (454)
                      ..| ..++++|++.++++...                                           .|.|..||+.+++.+-
T Consensus       393 ~~w-~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W  471 (677)
T 1kb0_A          393 HNW-HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW  471 (677)
T ss_dssp             SCS-SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred             cCC-CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence            111 25788998888777543                                           2789999999998776


Q ss_pred             EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .+.   +..++.+..++.++..++++ +.|+.+++||..++.
T Consensus       472 ~~~---~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~  509 (677)
T 1kb0_A          472 SVE---HVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGE  509 (677)
T ss_dssp             EEE---ESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             ecC---CCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCc
Confidence            665   33445556677788888888 789999999987664

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.41  E-value=9e-11  Score=116.42  Aligned_cols=265  Identities=15%  Similarity=0.121  Sum_probs=170.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCc-ccCCCCCCceEE-EEEeCCCcEEEEec------CCCcEEEEeC-CCccE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILA-LAVANNNELVASGD------NNSNIKLWSS-SLEHL  224 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~-~~~~~~~~~l~~~~------~dg~v~vw~~-~~~~~  224 (454)
                      +..|++++.||.|..+|..+++........ ...  ....+.+ ..+ .++. +++++      .+|.|..||. +++.+
T Consensus       121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~--~~~~~~~sP~v-~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~  196 (689)
T 1yiq_A          121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHK--RSYTITGAPRV-VNGK-VVIGNGGAEFGVRGYVTAYDAETGKEA  196 (689)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTT--SCCBCCSCCEE-ETTE-EEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCC--CCccccCCcEE-ECCE-EEEEeCCCccCCCCEEEEEECCCCcEE
Confidence            468888999999999999999987665432 100  0001110 011 1444 44443      3689999998 77777


Q ss_pred             Eeeccc-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc-------------------
Q psy17902        225 HTFTGH-------------------------------KAPITGLAISFECDTLYSSSNDRS-------------------  254 (454)
Q Consensus       225 ~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~-------------------  254 (454)
                      ..+...                               ......++++|+..+++.++.++.                   
T Consensus       197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~  276 (689)
T 1yiq_A          197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS  276 (689)
T ss_dssp             EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred             EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence            665421                               011125788888889999988764                   


Q ss_pred             EEEEeCCCceeEEEeec--cC-------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEEE-Ecccc-------
Q psy17902        255 IKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQLV-FNGHS-------  314 (454)
Q Consensus       255 i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~-~~~~~-------  314 (454)
                      |..||..+++.+..+..  |.       .++.......+|.   .++.++.+|.++++|..+++.+. .....       
T Consensus       277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~  356 (689)
T 1yiq_A          277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM  356 (689)
T ss_dssp             EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred             EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence            99999999998877754  21       1222222333554   78889999999999999998761 10000       


Q ss_pred             -------------------CC--------------eEEEEecCCCEEEEEeC----------------------------
Q psy17902        315 -------------------RG--------------IDMTRRVNDQQFITCGE----------------------------  333 (454)
Q Consensus       315 -------------------~~--------------i~~~~~~~~~~l~~~~~----------------------------  333 (454)
                                         ..              -.....+..+.+++...                            
T Consensus       357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  436 (689)
T 1yiq_A          357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT  436 (689)
T ss_dssp             ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred             CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence                               00              00122233445554421                            


Q ss_pred             -----------------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        334 -----------------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       334 -----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                                       +|.|..||+.+++.+..++....          +..-.+...+.++++|+.||.|+.||..+|
T Consensus       437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagglvf~gt~dg~l~a~D~~tG  506 (689)
T 1yiq_A          437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI----------FNGGTLSTAGNLVFEGSADGRVIAYAADTG  506 (689)
T ss_dssp             CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred             cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC----------ccCccceECCCEEEEECCCCcEEEEECCCC
Confidence                             37799999999999888765332          222345567889999999999999999999


Q ss_pred             ceeeEeccCCCceeeeEEEEcCCCCE-EEEEecCCCce
Q psy17902        397 RTLEFLQDIPLSGVINSLVFTSDHKH-LVAGIGTEHRF  433 (454)
Q Consensus       397 ~~~~~~~~~~~~~~v~~l~~s~d~~~-l~~~~~~d~~i  433 (454)
                      +.+..+... ......-+.|+.+|+. +++.+|..+.+
T Consensus       507 ~~lw~~~~~-~~~~~~p~ty~~~G~qyv~~~~G~gg~~  543 (689)
T 1yiq_A          507 EKLWEQPAA-SGVMAAPVTYSVDGEQYVTFMAGWGGAF  543 (689)
T ss_dssp             CEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCTTH
T ss_pred             ccceeeeCC-CCcccCceEEEECCEEEEEEEecCCccc
Confidence            998877642 2333345778888875 44444544433

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=99.41  E-value=6.5e-11  Score=117.40  Aligned_cols=281  Identities=7%  Similarity=0.041  Sum_probs=178.9

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCC---C-CCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK---S-YPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~-~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~  227 (454)
                      +..|++++.++.|..+|..+++.+..+........   . ...+ ..+++  .+..|++++.|+.|..+|. +++.+..+
T Consensus        70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~  147 (689)
T 1yiq_A           70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV  147 (689)
T ss_dssp             TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence            56788888899999999999998877653211000   0 0000 11222  3457888888999999999 78877766


Q ss_pred             ccc--CCCeEEEEEcC---CCCEEEEEe------CCCcEEEEeCCCceeEEEeeccC-----------------------
Q psy17902        228 TGH--KAPITGLAISF---ECDTLYSSS------NDRSIKVWNIEDRAYVETLFGHQ-----------------------  273 (454)
Q Consensus       228 ~~~--~~~v~~~~~~~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~-----------------------  273 (454)
                      ...  ......+..+|   ++ .+++++      .+|.|+.||..+++.+..+....                       
T Consensus       148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~  226 (689)
T 1yiq_A          148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA  226 (689)
T ss_dssp             ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred             cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence            542  11111111112   34 455543      36899999999999887764210                       


Q ss_pred             --------CceeEEEeecCCCEEEEeeCCCc-------------------EEEeeccCCeEE-EEcc--cc-------CC
Q psy17902        274 --------SAITSLDILAKNRVISSGGTDKS-------------------VRVWKIQEESQL-VFNG--HS-------RG  316 (454)
Q Consensus       274 --------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~-~~~~--~~-------~~  316 (454)
                              .....++++|+..+++.++.++.                   |..+|..+++.. .+..  |.       ..
T Consensus       227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~  306 (689)
T 1yiq_A          227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH  306 (689)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred             eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence                    01125788888888988887763                   999999999887 3332  21       11


Q ss_pred             eEEEEe-cCCC---EEEEEeCCCCEEEEecCCCccceeeecccCC----------------------C---------CCC
Q psy17902        317 IDMTRR-VNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGY----------------------D---------SSS  361 (454)
Q Consensus       317 i~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------------~---------~~~  361 (454)
                      ...... .++.   .++.++.+|.++++|..+++.+.........                      .         ...
T Consensus       307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~  386 (689)
T 1yiq_A          307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW  386 (689)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred             cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence            111111 1333   6888899999999999999987554332100                      0         000


Q ss_pred             CCCCcEEEEEEecCCCEEEEecC---------------------------------------------CCcEEEEEcCCC
Q psy17902        362 SEPNWITSVACLHNSDLVASGSY---------------------------------------------DGCVKLWKITPK  396 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~---------------------------------------------dg~v~iwd~~~~  396 (454)
                      +... -..++|+|+..+|++...                                             +|.|..||+.++
T Consensus       387 Gg~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG  465 (689)
T 1yiq_A          387 GAHD-WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ  465 (689)
T ss_dssp             CSSC-SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred             cccC-CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence            0001 123788898887776522                                             378999999999


Q ss_pred             ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       397 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +.+-.+..   ..++..-.++..+..++++ +.|+.|+.||..++.
T Consensus       466 ~~~W~~~~---~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~  507 (689)
T 1yiq_A          466 QAAWEVPY---VTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGE  507 (689)
T ss_dssp             EEEEEEEE---SSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             CeEeEccC---CCCccCccceECCCEEEEE-CCCCcEEEEECCCCc
Confidence            87766653   2334444566678888888 789999999987764

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.36  E-value=4.1e-13  Score=123.29  Aligned_cols=202  Identities=9%  Similarity=0.008  Sum_probs=119.4

Q ss_pred             CCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-cee-
Q psy17902        201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-AIT-  277 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~-  277 (454)
                      ++..|++++.||.|+.||. +++.+..+..  +.+.+..+..++..+++++.||.|+.||..+++.+..+..+.. .+. 
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~   85 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA   85 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence            5678999999999999998 7888877765  4555555666777888888999999999998887666543321 111 


Q ss_pred             EEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      +..+. .+..+++++.++.|+.||..+++.. .+..+. .+  ...+.++.+++++.++.|+.||..+++.+..+.... 
T Consensus        86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~--~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-  160 (369)
T 2hz6_A           86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-AD--SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-  160 (369)
T ss_dssp             CSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred             CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cc--cccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence            11111 3456778888999999999998876 333222 11  122367788899999999999999998877765321 


Q ss_pred             CCCCCCCCCcEEEEEEecCC---CEEEEecCCCcEEEEEcCCCceeeEeccCCCceee-eEEEEcCCCCE
Q psy17902        357 YDSSSSEPNWITSVACLHNS---DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI-NSLVFTSDHKH  422 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~l~~s~d~~~  422 (454)
                                .....++++.   ..+++++.||.|+.||..+++.+-....   ..++ ....++++|..
T Consensus       161 ----------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~---~~pv~~~~~~~~dg~~  217 (369)
T 2hz6_A          161 ----------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY---ASPVVAFYVWQREGLR  217 (369)
T ss_dssp             ----------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC---SSCEEEEEECTTSSCE
T ss_pred             ----------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC---CCceEEEEEecCCceE
Confidence                      1122233322   4567788899999999999987766552   3343 34566677753

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=99.36  E-value=2.5e-10  Score=112.96  Aligned_cols=259  Identities=15%  Similarity=0.115  Sum_probs=170.5

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecC------CCcEEEEeC-CCccE
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDN------NSNIKLWSS-SLEHL  224 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~~  224 (454)
                      .+..|++++.|+.|..+|..+++....+...... .....+.+ ..+ .++ .+++++.      +|.|+.||. +++.+
T Consensus       127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v-~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~  203 (677)
T 1kb0_A          127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRV-FKG-KVIIGNGGAEYGVRGYITAYDAETGERK  203 (677)
T ss_dssp             ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred             ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCc-CcCcccccCcEE-ECC-EEEEEecccccCCCCEEEEEECCCCcEE
Confidence            3568888999999999999999988766532000 00011111 111 134 4555543      689999998 77777


Q ss_pred             EeecccCCC--------------------------------eEEEEEcCCCCEEEEEeCCC-------------------
Q psy17902        225 HTFTGHKAP--------------------------------ITGLAISFECDTLYSSSNDR-------------------  253 (454)
Q Consensus       225 ~~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~dg-------------------  253 (454)
                      ..+......                                ...+++++++..++.++.++                   
T Consensus       204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~  283 (677)
T 1kb0_A          204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA  283 (677)
T ss_dssp             EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred             EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence            666432211                                13578888888999887764                   


Q ss_pred             cEEEEeCCCceeEEEeec--cC-------CceeEEEeecCC---CEEEEeeCCCcEEEeeccCCeEE-EEcccc-C----
Q psy17902        254 SIKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKN---RVISSGGTDKSVRVWKIQEESQL-VFNGHS-R----  315 (454)
Q Consensus       254 ~i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-~----  315 (454)
                      .|..+|..+++.+..+..  |.       .....+....+|   ..++.++.+|.|+++|..+++.+ ...... .    
T Consensus       284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~  363 (677)
T 1kb0_A          284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG  363 (677)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred             EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence            499999999998877653  21       112223333467   68899999999999999999887 221110 0    


Q ss_pred             ------Ce-------------------------EEEEecCCCEEEEEeC-------------------------------
Q psy17902        316 ------GI-------------------------DMTRRVNDQQFITCGE-------------------------------  333 (454)
Q Consensus       316 ------~i-------------------------~~~~~~~~~~l~~~~~-------------------------------  333 (454)
                            .+                         .....+...++++...                               
T Consensus       364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g  443 (677)
T 1kb0_A          364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA  443 (677)
T ss_dssp             ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred             cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence                  00                         1122334556665432                               


Q ss_pred             ------------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        334 ------------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       334 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                                  .|.|..||+.+++.+..++....          +....+...+.++++++.||.|++||..+++.+..
T Consensus       444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~  513 (677)
T 1kb0_A          444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP----------WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE  513 (677)
T ss_dssp             EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred             cccccccCCCCCccEEEEEeCCCCcEEeecCCCCC----------CcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence                        27799999999998888764321          33344667788899999999999999999999988


Q ss_pred             eccCCCceeeeEEEEcCCCCEEEE
Q psy17902        402 LQDIPLSGVINSLVFTSDHKHLVA  425 (454)
Q Consensus       402 ~~~~~~~~~v~~l~~s~d~~~l~~  425 (454)
                      +... ......-+.|.++|+.+++
T Consensus       514 ~~~~-~~~~~~p~~y~~~G~~~v~  536 (677)
T 1kb0_A          514 APTG-TGVVAAPSTYMVDGRQYVS  536 (677)
T ss_dssp             EECS-SCCCSCCEEEEETTEEEEE
T ss_pred             eeCC-CCcccCCEEEEeCCEEEEE
Confidence            8742 3333455677788875443

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.36  E-value=6.4e-11  Score=107.05  Aligned_cols=264  Identities=11%  Similarity=0.065  Sum_probs=169.3

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      ...+.++...+++. |+.++.+  |..+|. ++........      .........+.  +..|.+++.++.|..+|..+
T Consensus        59 ~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~------~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g  126 (330)
T 3hxj_A           59 EIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDT------KKAIVSDFTIF--EDILYVTSMDGHLYAINTDG  126 (330)
T ss_dssp             GEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----------CCEEEE--TTEEEEECTTSEEEEECTTS
T ss_pred             CCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEEC------CCCcccCceEE--CCEEEEEecCCEEEEEcCCC
Confidence            34456777776664 5555544  888886 4554444332      11112223333  44577788889999999876


Q ss_pred             ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      ........+...+.++...+++. |+.++.++.|..||.. ++.+..+......+.++...+++.+.+ ++  +.|..||
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d  201 (330)
T 3hxj_A          127 TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN  201 (330)
T ss_dssp             CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC
T ss_pred             CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC
Confidence            66666655555667777776665 6667788999999998 777766665566677788877777555 44  7899999


Q ss_pred             ccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        302 IQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       302 ~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                       .++... .+......+..+....++.+.+++.++.|..++. ++..+..+......         +.++.+.+++ .|.
T Consensus       202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~---------~~~~~~~~~g-~l~  269 (330)
T 3hxj_A          202 -PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRI---------ESSPVIGNTD-TIY  269 (330)
T ss_dssp             -TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCC---------CSCCEECTTS-CEE
T ss_pred             -CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCc---------cccceEcCCC-eEE
Confidence             565554 4444444455555555667888888888999974 55555555432211         2334455555 566


Q ss_pred             EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      +++.+|.|..+|. +++.+..+..  ....+.++...++|...+ + +.+|.+.+....
T Consensus       270 v~t~~ggl~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~l~~-g-t~~G~~~~~~~~  323 (330)
T 3hxj_A          270 FGSYDGHLYAINP-DGTEKWNFET--GSWIIATPVIDENGTIYF-G-TRNGKFYALFNL  323 (330)
T ss_dssp             EECTTCEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTCCEEE-E-CTTSCEEEEEC-
T ss_pred             EecCCCCEEEECC-CCcEEEEEEc--CCccccceEEcCCCEEEE-E-cCCCeEEEEecc
Confidence            6777888999996 6666655543  345677888888887555 5 578888776543

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=99.36  E-value=7.9e-10  Score=101.91  Aligned_cols=256  Identities=10%  Similarity=0.053  Sum_probs=164.2

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK  231 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~  231 (454)
                      ++..|++++.++.|..+|..+++..........  ....+    ...  +..+++++.++.|..+|. +++.+..+....
T Consensus       102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~--~~~~p----~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~  173 (376)
T 3q7m_A          102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE--ALSRP----VVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDM  173 (376)
T ss_dssp             ETTEEEEEETTSEEEEEETTTCCEEEEEECSSC--CCSCC----EEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc--eEcCC----EEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence            456788889999999999999987765543111  01111    122  346778888999999998 677776665432


Q ss_pred             CCe-----EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCc----------e-eEEEeecCCCEEEEeeCCC
Q psy17902        232 API-----TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA----------I-TSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       232 ~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~dg  295 (454)
                      ...     ......  +..+++++.++.|..+|..+++.+.........          + .....  .+..++.++.++
T Consensus       174 ~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g  249 (376)
T 3q7m_A          174 PSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNG  249 (376)
T ss_dssp             -----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTS
T ss_pred             CceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCc
Confidence            211     112222  457888888999999999999887665422110          1 11111  246677788899


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      .+..+|..+++..-.... ...... ...++.+++++.++.|..+|..+++.+.........        .+.....  .
T Consensus       250 ~l~~~d~~tG~~~w~~~~-~~~~~~-~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~--------~~~~~~~--~  317 (376)
T 3q7m_A          250 NLTALDLRSGQIMWKREL-GSVNDF-IVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR--------LLTSPVL--Y  317 (376)
T ss_dssp             CEEEEETTTCCEEEEECC-CCEEEE-EEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS--------CCCCCEE--E
T ss_pred             EEEEEECCCCcEEeeccC-CCCCCc-eEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC--------cccCCEE--E
Confidence            999999999887722221 222222 234778888889999999999999887766522111        0122222  2


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeee-EEEEcCCCCEEEEEecCCCceeeee
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVIN-SLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      +..|++++.+|.|.++|..+++.+.....  ....+. .....  +..|+++ +.+|.|..|+
T Consensus       318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~--~~~~~~~~~~~~--~~~l~v~-~~~G~l~~~~  375 (376)
T 3q7m_A          318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV--DSSGFQTEPVAA--DGKLLIQ-AKDGTVYSIT  375 (376)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEEC--CTTCBCSCCEEE--TTEEEEE-BTTSCEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEEec--CCCcceeCCEEE--CCEEEEE-eCCCEEEEEe
Confidence            45788888999999999999987766653  122222 22222  4567777 6788888876

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.35  E-value=7.1e-11  Score=107.05  Aligned_cols=248  Identities=10%  Similarity=-0.000  Sum_probs=161.6

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcccCC-CCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902        147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTDR-KSYPPILALAVANNNELVASGDN--NSN  213 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~  213 (454)
                      .+.++|++++|+++.          .++.|.+||+.+.+....+....... ........++++|||++|+++..  +..
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~  148 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence            799999999999886          36899999999999888775420000 00123557999999999998875  457


Q ss_pred             EEE--EeCCCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----ceeEEE----eeccCCceeEEEe
Q psy17902        214 IKL--WSSSLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIED-----RAYVET----LFGHQSAITSLDI  281 (454)
Q Consensus       214 v~v--w~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~~~~~~----~~~~~~~v~~~~~  281 (454)
                      |.+  +|+..  +..+..- +.   +.+.|++ ..+++.+.||.+.+.|+.+     ++....    +.....+.   . 
T Consensus       149 v~V~~iD~~t--v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-  218 (368)
T 1mda_H          149 AGLSVPGASD--DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-  218 (368)
T ss_dssp             EEEEETTTEE--EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-
T ss_pred             EEEEEEchhh--ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-
Confidence            888  88843  4444321 11   1223444 3455667788888888886     443211    11112333   3 


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEEE---Ecc----------ccCCeE-EEEecCCCEEEEEeC---------CCCEE
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQLV---FNG----------HSRGID-MTRRVNDQQFITCGE---------DGTLS  338 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~----------~~~~i~-~~~~~~~~~l~~~~~---------dg~i~  338 (454)
                      .+++..++..+. +.|.+.|+.+.....   +..          ...... ....+++.+++++..         ++.+.
T Consensus       219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~  297 (368)
T 1mda_H          219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS  297 (368)
T ss_dssp             ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred             cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence            566666555666 999999987543211   100          011111 345556676665432         23566


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      ++|+.+.+.+..++....          ...|+|+|+|+ ++++.. .++.|.++|+.+++.+..+..   ......+++
T Consensus       298 ViD~~t~~vv~~i~vg~~----------p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v---g~~P~~i~~  364 (368)
T 1mda_H          298 SVTASVGQTSGPISNGHD----------SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL---DKGPESLSV  364 (368)
T ss_dssp             EEESSSCCEEECCEEEEE----------ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC---CSCCCEEEC
T ss_pred             EEECCCCeEEEEEECCCC----------cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC---CCCCCEEEe
Confidence            999999999988876542          78899999998 566666 589999999999998888863   344566666


Q ss_pred             cC
Q psy17902        417 TS  418 (454)
Q Consensus       417 s~  418 (454)
                      .+
T Consensus       365 ~~  366 (368)
T 1mda_H          365 QN  366 (368)
T ss_dssp             CC
T ss_pred             ec
Confidence            54

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.35  E-value=5.1e-10  Score=101.89  Aligned_cols=227  Identities=9%  Similarity=0.077  Sum_probs=141.0

Q ss_pred             CCCcEEEE-ecCCCcEEEEeCC-C----ccEEeec------c-cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeC
Q psy17902        200 NNNELVAS-GDNNSNIKLWSSS-L----EHLHTFT------G-HKAPITGLAISFECDTLYSSSND------RSIKVWNI  260 (454)
Q Consensus       200 ~~~~~l~~-~~~dg~v~vw~~~-~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~  260 (454)
                      .++++|++ |..++.|.|+|+. .    +...++.      . .......+.++|+| .++++..+      |.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            67776665 5567899999983 2    2333441      1 11244567888999 77766555      78999999


Q ss_pred             CCceeEEEeeccCC---ceeEEEeecCCCEEEEee-------------------CCCcEEEeeccCCeEE-EEccc---c
Q psy17902        261 EDRAYVETLFGHQS---AITSLDILAKNRVISSGG-------------------TDKSVRVWKIQEESQL-VFNGH---S  314 (454)
Q Consensus       261 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~-~~~~~---~  314 (454)
                      .+++.+..+.....   .-..+.|+|+++.+++..                   ....|.+||+.+++.. .+...   .
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence            99999888863222   234588899999888874                   3689999999987665 22221   1


Q ss_pred             CCeEEEE--ecCCCEEEEEe------CCCCEEEEecCCCcc--ceeeecccC-CCC-CC-------CCCCcEEEEEEecC
Q psy17902        315 RGIDMTR--RVNDQQFITCG------EDGTLSLWSILKKVP--THTIPVAHG-YDS-SS-------SEPNWITSVACLHN  375 (454)
Q Consensus       315 ~~i~~~~--~~~~~~l~~~~------~dg~i~iwd~~~~~~--~~~~~~~~~-~~~-~~-------~~~~~i~~~~~s~~  375 (454)
                      .+....+  .+++.++++++      .+++|.+|....+..  ...+..... ... ..       ........|.+|||
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D  331 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD  331 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence            2222222  45566666555      567887776544321  111111110 000 00       00133778999999


Q ss_pred             CCEEEEecC-CCcEEEEEcCCC---ceeeEeccC------------CCceeeeEEEEcCCCCEEEEEe
Q psy17902        376 SDLVASGSY-DGCVKLWKITPK---RTLEFLQDI------------PLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       376 ~~~l~~~~~-dg~v~iwd~~~~---~~~~~~~~~------------~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      |++|.++.. .+.|.+||+...   +.+..+...            ...+....++++|||++|+++.
T Consensus       332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            998877765 678999998643   344444321            0011368899999999999994

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.33  E-value=6.7e-10  Score=104.78  Aligned_cols=222  Identities=11%  Similarity=0.049  Sum_probs=146.5

Q ss_pred             CCcEEEEecC-CCcEEEEeC-CCccEEeecc-cCCCeEEEEE-c-CCCCEEEEEeC------------------CCcEEE
Q psy17902        201 NNELVASGDN-NSNIKLWSS-SLEHLHTFTG-HKAPITGLAI-S-FECDTLYSSSN------------------DRSIKV  257 (454)
Q Consensus       201 ~~~~l~~~~~-dg~v~vw~~-~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~~------------------dg~i~i  257 (454)
                      ||++|++... ++.|.+.|+ ..+....+.- ....+..+++ + |++.++++++.                  ++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            7888877665 467999999 4455553321 2345788888 5 89999998852                  457999


Q ss_pred             EeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC--------------------------------------cEEE
Q psy17902        258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK--------------------------------------SVRV  299 (454)
Q Consensus       258 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~i  299 (454)
                      +|..+.+.+..+.--. ....++++|+|+++++++.+.                                      .|.|
T Consensus       180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V  258 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV  258 (595)
T ss_dssp             EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred             EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence            9999998887775322 456788999999998888553                                      3555


Q ss_pred             eeccC--CeE-E-EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCc------------cceeeecccCCCCCCC
Q psy17902        300 WKIQE--ESQ-L-VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKV------------PTHTIPVAHGYDSSSS  362 (454)
Q Consensus       300 ~d~~~--~~~-~-~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~~~~~~~~~  362 (454)
                      .|.++  +.. + .......+..+...+++.++++++ .+.+|.++|+.+.+            ....+...        
T Consensus       259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--------  330 (595)
T 1fwx_A          259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG--------  330 (595)
T ss_dssp             EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--------
T ss_pred             EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC--------
Confidence            56555  322 2 222222333455556677666555 78899999998653            12222221        


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC----------CceeeEeccCCCce---eeeEEEEcCCCCEEEEEecC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITP----------KRTLEFLQDIPLSG---VINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~~~~~~---~v~~l~~s~d~~~l~~~~~~  429 (454)
                        .....++|+|+|...++.-.|++|.+||+..          ...+..+......+   .-.++.++|||++|+++...
T Consensus       331 --~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~  408 (595)
T 1fwx_A          331 --LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF  408 (595)
T ss_dssp             --SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred             --CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence              2278899999995555666799999999987          44555555421111   12334678999999998654


Q ss_pred             C-Cce
Q psy17902        430 E-HRF  433 (454)
Q Consensus       430 d-~~i  433 (454)
                      . .++
T Consensus       409 skdr~  413 (595)
T 1fwx_A          409 SKDRF  413 (595)
T ss_dssp             CTTSS
T ss_pred             Ccccc
Confidence            4 444

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.29  E-value=5.5e-11  Score=107.47  Aligned_cols=258  Identities=10%  Similarity=0.012  Sum_probs=162.2

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEe
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHT  226 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~  226 (454)
                      +..+..++ .|++++.++.|..|| .+++.......      ....+.++...+++. |.+++.+  |..+|.++..+..
T Consensus        24 ~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~------~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~~~~~   92 (330)
T 3hxj_A           24 SPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKS------GEIIECRPSIGKDGT-IYFGSDK--VYAINPDGTEKWR   92 (330)
T ss_dssp             CCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCG------GGEEEECCEETTTTE-ECCSSCE--EEEECCCGGGGGG
T ss_pred             CceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEec------CCCcccceEEecCCc-EEEecCc--EEEECCCCcEEEE
Confidence            34444454 566777888899999 77776655442      233456677766765 5555554  8888876655544


Q ss_pred             ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe
Q psy17902        227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES  306 (454)
Q Consensus       227 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  306 (454)
                      +...........+.  +..|++++.++.|..+|.. ++....+..+...+.++...+++. |+.++.++.|..||.. +.
T Consensus        93 ~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~  167 (330)
T 3hxj_A           93 FDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT  167 (330)
T ss_dssp             SCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC
T ss_pred             EECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC
Confidence            44333333333343  5678888889999999998 777666655555667777776776 4557778999999998 55


Q ss_pred             EE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        307 QL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       307 ~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .. .+......+..+....++.+++++  +.|..|| .++..........         ..+.++...++|.+ .+++.+
T Consensus       168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~---------~~~~~~~~~~~g~l-~v~t~~  234 (330)
T 3hxj_A          168 EKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGY---------WTVTRPAISEDGTI-YVTSLD  234 (330)
T ss_dssp             EEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSS---------CCCSCCEECTTSCE-EEEETT
T ss_pred             EeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCC---------cceeceEECCCCeE-EEEcCC
Confidence            54 443333344444444445566666  8899999 6766665554321         22677788888754 455667


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +.|..++. ++..+..+..  ....+.++.+.+++.. .++ +.++.|..++.
T Consensus       235 ~gl~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~g~l-~v~-t~~ggl~~~d~  282 (330)
T 3hxj_A          235 GHLYAINP-DGTEKWRFKT--GKRIESSPVIGNTDTI-YFG-SYDGHLYAINP  282 (330)
T ss_dssp             TEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTSCE-EEE-CTTCEEEEECT
T ss_pred             CeEEEECC-CCCEeEEeeC--CCCccccceEcCCCeE-EEe-cCCCCEEEECC
Confidence            77888874 4555544443  2333455667666654 445 46778888874

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.22  E-value=9.1e-10  Score=100.03  Aligned_cols=230  Identities=7%  Similarity=-0.030  Sum_probs=142.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEec---CC
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-----DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGD---NN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~d  211 (454)
                      |-..+.+++++++++++++-..     ++.|.+||+.+++....+.+......+...+..+++++++..+ ++..   .+
T Consensus        65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~  144 (343)
T 2qe8_A           65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK  144 (343)
T ss_dssp             CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred             ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence            6678999999999876665543     5789999999887655543321111233457899999864444 5444   57


Q ss_pred             CcEEEEeCC-CccEEeecccCCCeE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        212 SNIKLWSSS-LEHLHTFTGHKAPIT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       212 g~v~vw~~~-~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      +.|.+||+. +.....+..|..... ...+.+++..+.+.+.+|.+..|.              ..+..|+|+|+++.|+
T Consensus       145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly  210 (343)
T 2qe8_A          145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLY  210 (343)
T ss_dssp             CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEE
T ss_pred             CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEE
Confidence            899999994 554444544422110 134455677777777788776553              2357899999999888


Q ss_pred             EeeCCC-cEEEeeccC---Ce--------EEEEccccCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        290 SGGTDK-SVRVWKIQE---ES--------QLVFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       290 ~~~~dg-~i~i~d~~~---~~--------~~~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      ++...+ .|..++...   +.        .+...++.... .....+++..+++...++.|.+||..++.........  
T Consensus       211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~--  288 (343)
T 2qe8_A          211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE--  288 (343)
T ss_dssp             EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG--
T ss_pred             EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC--
Confidence            877665 444444321   10        00111222222 2334456777777778899999998555432222211  


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                            ...++.+++|.+++.++++.+..+.+.+|.
T Consensus       289 ------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~  318 (343)
T 2qe8_A          289 ------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN  318 (343)
T ss_dssp             ------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred             ------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence                  123389999999998887777655554443

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.22  E-value=1.7e-07  Score=95.16  Aligned_cols=282  Identities=9%  Similarity=0.050  Sum_probs=179.0

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      ...|.++...++|+ |..|+.++-|..|+..+..............-....|.++...++|. |..|+.++-|..|+...
T Consensus       309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~  386 (795)
T 4a2l_A          309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPIT  386 (795)
T ss_dssp             SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTT
T ss_pred             CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCC
Confidence            35799999998876 56677777788898765432211111001111345699999988887 55577777799999855


Q ss_pred             ccEEeecc---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee----ccCCceeEEEeecCCCEE
Q psy17902        222 EHLHTFTG---------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF----GHQSAITSLDILAKNRVI  288 (454)
Q Consensus       222 ~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l  288 (454)
                      .....+..         ....|.++...+++..|..|+.++-|.+||..+++......    .....|.++...+++.+.
T Consensus       387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw  466 (795)
T 4a2l_A          387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLW  466 (795)
T ss_dssp             CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred             CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE
Confidence            44443321         23578999988888757788887779999998876443221    134578999988878765


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEccc-------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGH-------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                      + |+. +.|.+|+..++....+...       ...+.++.....+.+..|+. +-|.+|+..+...  .+......  ..
T Consensus       467 i-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~--~~  539 (795)
T 4a2l_A          467 L-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPV--SN  539 (795)
T ss_dssp             E-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCS--CG
T ss_pred             E-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCC--CC
Confidence            5 444 4588999887765544321       24566666666666777777 5688999876654  22110000  00


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .....|.++...++|.+.+++. .| |..||..++... .+...  -....|.++...++|...+++   +..|..|+.
T Consensus       540 l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t---~~Gl~~~~~  612 (795)
T 4a2l_A          540 VTKLFTNCIYEASNGIIWVGTR-EG-FYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSFGRLWLST---NRGISCFNP  612 (795)
T ss_dssp             GGGSCEEEEEECTTSCEEEEES-SC-EEEEETTTTEEE-EECGGGTCSCSCEEEEEECTTSCEEEEE---TTEEEEEET
T ss_pred             CCCCeeEEEEECCCCCEEEEeC-CC-ceeECCCCCcEE-EeCCCCCCchhheEEEEECCCCCEEEEc---CCceEEEcC
Confidence            1234599999999998655444 34 888998765332 22211  123468899999999877765   344555654

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.21  E-value=1.5e-08  Score=86.78  Aligned_cols=200  Identities=10%  Similarity=0.004  Sum_probs=138.1

Q ss_pred             CeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCC-ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902        233 PITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQS-AITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-  308 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-  308 (454)
                      ....+.|++++.++++.+.  ++.|.++|+.+++.+..+..... ....+++.. +.+.++.-.++.+.++|..+.+.+ 
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~  100 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK  100 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence            3579999998644444443  57999999999998887652221 223455552 344444556889999999998877 


Q ss_pred             EEccc-cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902        309 VFNGH-SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       309 ~~~~~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                      .+... ..+.  ...+++..++++..++.|.++|..+.+.+..+.......    .-..++.+.|. +|.+.+....++.
T Consensus       101 ~i~~g~~~g~--glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~----p~~~~nele~~-dg~lyvn~~~~~~  173 (266)
T 2iwa_A          101 NFTHQMKDGW--GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH----RVIRLNELEYI-NGEVWANIWQTDC  173 (266)
T ss_dssp             EEECCSSSCC--EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred             EEECCCCCeE--EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc----ccccceeEEEE-CCEEEEecCCCCe
Confidence            33222 2222  233466666666678999999999998888887643210    01126788888 7766666656789


Q ss_pred             EEEEEcCCCceeeEeccCC-----------CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        388 VKLWKITPKRTLEFLQDIP-----------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      |.+.|..+++.+..+....           .....+.++|+|+++.|++++...+.|...+..+
T Consensus       174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred             EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence            9999999999888876421           1135689999999999888877788887777654

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=99.20  E-value=2.2e-07  Score=94.40  Aligned_cols=281  Identities=10%  Similarity=0.112  Sum_probs=177.9

Q ss_pred             eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE
Q psy17902        145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHL  224 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~  224 (454)
                      |.++...+++. |..|+.++.|..|+..+.........     .....|.++...+++.+.+. +.++-+.+|+......
T Consensus       175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~-----~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~  247 (795)
T 4a2l_A          175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPI-----LGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEI  247 (795)
T ss_dssp             CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC---------CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEE
T ss_pred             eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCC-----CCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeE
Confidence            88888887775 44566655688899876654332111     13457889988888875554 4344488899855544


Q ss_pred             Eeecc--------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-------cCCceeEEEeecCCCEEE
Q psy17902        225 HTFTG--------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-------HQSAITSLDILAKNRVIS  289 (454)
Q Consensus       225 ~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~  289 (454)
                      ..+..        ....|.++...++|. |..|+.+ -|.+||..++........       ....|.++...++|.+ .
T Consensus       248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-W  324 (795)
T 4a2l_A          248 KNYLHSPSNPKSISSNYIRSLAMDSQNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-W  324 (795)
T ss_dssp             EEECCCTTCTTSCSCSBEEEEEECTTSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-E
T ss_pred             EEeecCCCCccccCCCeEEEEEEcCCCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-E
Confidence            44321        135699999887776 5555555 489999887765432211       2356999999888765 4


Q ss_pred             EeeCCCcEEEeeccCCeEEEEcc-------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        290 SGGTDKSVRVWKIQEESQLVFNG-------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      .|+.++-|..|+..+.....+..       ....|.++.....+.|..|+.++-|..|+..++............. ...
T Consensus       325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~-~~l  403 (795)
T 4a2l_A          325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA-RGI  403 (795)
T ss_dssp             EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-------CC
T ss_pred             EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcc-cCC
Confidence            57777789999877654433321       2334677776667778889988889999987654332211100000 001


Q ss_pred             CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc--CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD--IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ....|.++...++|++|.+|+.++-|.+|+..+++.......  ......|.++...++|...+.+ .  +.|.+|+..
T Consensus       404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~--~Gl~~~~~~  479 (795)
T 4a2l_A          404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L--SALVRFNPE  479 (795)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S--SCEEEEETT
T ss_pred             CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c--CceeEEeCC
Confidence            134599999999998566677766799999887654332211  0134568999999988877655 3  346666643

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.18  E-value=5.5e-08  Score=84.79  Aligned_cols=219  Identities=8%  Similarity=-0.025  Sum_probs=137.2

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCC
Q psy17902        144 SITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSL  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~  221 (454)
                      .+.+++|++++..|+.+. ..+.|..+++.+........      ........+++++++..|+ +-...+.|.++++.+
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g  110 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG  110 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence            367999999766665554 56899999987654322211      1224678999999755444 445568999999965


Q ss_pred             ccEEeecc-cCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEE-EeeCCC
Q psy17902        222 EHLHTFTG-HKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVIS-SGGTDK  295 (454)
Q Consensus       222 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~dg  295 (454)
                      .....+.. .......++++|++..|+.+..   .+.|..+++.... ...+. ........+++++++..|+ +-...+
T Consensus       111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~  189 (267)
T 1npe_A          111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH  189 (267)
T ss_dssp             CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred             CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence            54433322 2246789999997666666654   3688888876433 22222 2334578999999876554 444567


Q ss_pred             cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      .|.++++.......+.........+....+..+++....+.|.++|..+++.+..+......        ....+++.|+
T Consensus       190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~--------~p~gi~~~~~  261 (267)
T 1npe_A          190 RAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQT--------RLYGITIALS  261 (267)
T ss_dssp             EEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCC--------CCCCEEEECS
T ss_pred             EEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcccccc--------ccceeeecCc
Confidence            89999987654432221111122333333434444446789999999988888877643210        1455777776


Q ss_pred             CC
Q psy17902        376 SD  377 (454)
Q Consensus       376 ~~  377 (454)
                      +.
T Consensus       262 ~~  263 (267)
T 1npe_A          262 QC  263 (267)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=99.18  E-value=9.4e-08  Score=83.30  Aligned_cols=253  Identities=9%  Similarity=-0.015  Sum_probs=149.4

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCCccEEeec-ccCC
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSLEHLHTFT-GHKA  232 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~~~~~~~-~~~~  232 (454)
                      .+|+.+.. +.|+.+++....... +............+..++|++++..|+ +-...+.|.++++.+.....+. ....
T Consensus         2 ~~l~~~~~-~~I~~~~~~g~~~~~-~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~   79 (267)
T 1npe_A            2 THLLFAQT-GKIERLPLERNTMKK-TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (267)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCG-GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             cEEEEEcC-CeEEEEEecCccccc-ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence            45666554 578888887643211 000000001123567899999655555 4455789999999655443332 2235


Q ss_pred             CeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC---CCcEEEeeccCCeEE
Q psy17902        233 PITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT---DKSVRVWKIQEESQL  308 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~  308 (454)
                      ....+++++++..|+.+ ...+.|.++++..................++++|++..|+.+..   .+.|..+++......
T Consensus        80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~  159 (267)
T 1npe_A           80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR  159 (267)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred             CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence            67899999976655555 45678999998754322222222245689999997665555443   368888887654332


Q ss_pred             EEc-cccCCeEEEEe-cCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        309 VFN-GHSRGIDMTRR-VNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       309 ~~~-~~~~~i~~~~~-~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .+. ........+.+ ++++.|+ +....+.|.++++........+..          ......++.. .+.++++....
T Consensus       160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----------~~~P~gi~~d-~~~lyva~~~~  228 (267)
T 1npe_A          160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG----------LQYPFAVTSY-GKNLYYTDWKT  228 (267)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC----------CCSEEEEEEE-TTEEEEEETTT
T ss_pred             EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC----------CCCceEEEEe-CCEEEEEECCC
Confidence            221 22222333444 4455554 444678899999875433222221          1114566664 44455555567


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK  421 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~  421 (454)
                      +.|.++|..+++.+..+... .......+++.|++.
T Consensus       229 ~~v~~~d~~~g~~~~~i~~g-~~~~p~gi~~~~~~~  263 (267)
T 1npe_A          229 NSVIAMDLAISKEMDTFHPH-KQTRLYGITIALSQC  263 (267)
T ss_dssp             TEEEEEETTTTEEEEEECCS-SCCCCCCEEEECSCC
T ss_pred             CeEEEEeCCCCCceEEEccc-cccccceeeecCccC
Confidence            89999999989888877631 122467888888875

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.14  E-value=7.6e-09  Score=102.34  Aligned_cols=263  Identities=14%  Similarity=0.115  Sum_probs=165.9

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeCCCcEEEEecC------CCcEEEEeC-CCcc
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVANNNELVASGDN------NSNIKLWSS-SLEH  223 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~  223 (454)
                      +..|++++.||.|..+|..+++............   ....++    +. ++ .++++..      +|.|..+|. +++.
T Consensus       117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~  190 (668)
T 1kv9_A          117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----VV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKL  190 (668)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----EE-TT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred             CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----EE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence            4678888999999999999999887654321100   011111    11 44 4555433      589999998 7777


Q ss_pred             EEeecccC-------------------------------CCeEEEEEcCCCCEEEEEeCCCc------------------
Q psy17902        224 LHTFTGHK-------------------------------APITGLAISFECDTLYSSSNDRS------------------  254 (454)
Q Consensus       224 ~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~------------------  254 (454)
                      +..+....                               .....+++.+...+++.++.++.                  
T Consensus       191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~  270 (668)
T 1kv9_A          191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS  270 (668)
T ss_dssp             EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred             EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence            77664210                               11124688888888888887763                  


Q ss_pred             -EEEEeCCCceeEEEeec--cC-------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEEE-Ecccc------
Q psy17902        255 -IKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQLV-FNGHS------  314 (454)
Q Consensus       255 -i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~-~~~~~------  314 (454)
                       |..+|..+++.+..+..  |.       .++....+..+++   .++.++.+|.++++|..+++.+. .....      
T Consensus       271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~  350 (668)
T 1kv9_A          271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK  350 (668)
T ss_dssp             EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred             eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence             99999999998877753  22       2333333334664   68889999999999999988761 11000      


Q ss_pred             ------CCe-------------------------EEEEecCCCEEEEE--------------------------------
Q psy17902        315 ------RGI-------------------------DMTRRVNDQQFITC--------------------------------  331 (454)
Q Consensus       315 ------~~i-------------------------~~~~~~~~~~l~~~--------------------------------  331 (454)
                            .++                         .....+....+++.                                
T Consensus       351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  430 (668)
T 1kv9_A          351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD  430 (668)
T ss_dssp             ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred             cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence                  000                         01112222333321                                


Q ss_pred             ----eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC
Q psy17902        332 ----GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL  407 (454)
Q Consensus       332 ----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  407 (454)
                          ..+|.|..||+.+++.+...+....          .....+...+.++++++.||.|++||..+++.+..+... .
T Consensus       431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~-~  499 (668)
T 1kv9_A          431 VPAAVVSGALLAWDPVKQKAAWKVPYPTH----------WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ-S  499 (668)
T ss_dssp             CCGGGCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-S
T ss_pred             CCCCCccceEEEEeCCCCcEEEEccCCCC----------CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC-C
Confidence                1247899999999998888765322          222334456788999999999999999999988877652 1


Q ss_pred             ceeeeEEEEcCCCC-EEEEEecCCCce
Q psy17902        408 SGVINSLVFTSDHK-HLVAGIGTEHRF  433 (454)
Q Consensus       408 ~~~v~~l~~s~d~~-~l~~~~~~d~~i  433 (454)
                      .....-+.+..+|+ +++++.|.++.+
T Consensus       500 ~~~~~p~~~~~~G~~yva~~~G~g~~~  526 (668)
T 1kv9_A          500 GIVAAPMTFELAGRQYVAIMAGWGGVA  526 (668)
T ss_dssp             CCCSCCEEEEETTEEEEEEEECCCSHH
T ss_pred             CcccCceEEEECCEEEEEEEecCCCcc
Confidence            11113345556776 566665655543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=99.11  E-value=5e-08  Score=88.97  Aligned_cols=231  Identities=11%  Similarity=0.085  Sum_probs=142.2

Q ss_pred             CCCCEEEEE-eCCCeEEEEEcCCC----ceecccCCcccC-CCCCCceEEEEEeCCCcEEEEecCC------CcEEEEeC
Q psy17902        152 SDSKHVYSA-CKDGIIIKWLLETR----SKVCSSPFVKTD-RKSYPPILALAVANNNELVASGDNN------SNIKLWSS  219 (454)
Q Consensus       152 ~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d------g~v~vw~~  219 (454)
                      ++.++|++. ..++.|.++|+.+.    +....+...... .........+...|+| +++++..+      |.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            777777664 46689999998754    333322100000 0011134567788999 66666554      78999998


Q ss_pred             -CCccEEeecccCC---CeEEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCceeEEEeecc--CC
Q psy17902        220 -SLEHLHTFTGHKA---PITGLAISFECDTLYSSS-------------------NDRSIKVWNIEDRAYVETLFGH--QS  274 (454)
Q Consensus       220 -~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~--~~  274 (454)
                       +.+.+.++.....   .-+.+.|+|+++.+++..                   ...+|.+||+.+++.+.++..-  ..
T Consensus       172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~  251 (462)
T 2ece_A          172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR  251 (462)
T ss_dssp             TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred             CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence             5677777653222   234588899999888885                   3689999999998888777542  12


Q ss_pred             ceeEEEe--ecCCCEEEEee------CCCcEEEeeccCCeEE-----EEcc-----------------ccCCeEEEEecC
Q psy17902        275 AITSLDI--LAKNRVISSGG------TDKSVRVWKIQEESQL-----VFNG-----------------HSRGIDMTRRVN  324 (454)
Q Consensus       275 ~v~~~~~--~~~~~~l~~~~------~dg~i~i~d~~~~~~~-----~~~~-----------------~~~~i~~~~~~~  324 (454)
                      ....|.|  +|+++++++++      .+++|.+|....+...     .+..                 ...+......++
T Consensus       252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D  331 (462)
T 2ece_A          252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD  331 (462)
T ss_dssp             EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred             ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence            3445555  99999887777      4568887766543221     0111                 112233445566


Q ss_pred             CCEEEEEe-CCCCEEEEecCCC---ccceeeecccCC---C--CCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        325 DQQFITCG-EDGTLSLWSILKK---VPTHTIPVAHGY---D--SSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       325 ~~~l~~~~-~dg~i~iwd~~~~---~~~~~~~~~~~~---~--~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      +.+|.++. ..+.|.+||+...   +.+..+......   .  ....-......++++|+|++|+++.
T Consensus       332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred             CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence            77766655 5789999998632   344444433110   0  0000012357799999999988887

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=99.11  E-value=4.8e-08  Score=83.64  Aligned_cols=201  Identities=9%  Similarity=0.033  Sum_probs=132.6

Q ss_pred             ceEEEEEeCCCcEEEEecC--CCcEEEEeC-CCccEEeecccC-CCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeE
Q psy17902        192 PILALAVANNNELVASGDN--NSNIKLWSS-SLEHLHTFTGHK-APITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYV  266 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~--dg~v~vw~~-~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~  266 (454)
                      ....++|++++.+.++.+.  ++.|.++|+ +++.+..+.-.. .....+++.  ++.|+.+. .++.+.++|..+.+.+
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~   99 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI   99 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence            4678999998765555443  579999999 666666654221 222345554  55555554 5789999999999998


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc-c-ccC---CeEEEEecCCCEEEEEeCCCCEEEE
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN-G-HSR---GIDMTRRVNDQQFITCGEDGTLSLW  340 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~-~-~~~---~i~~~~~~~~~~l~~~~~dg~i~iw  340 (454)
                      ..+......  ...++++++.++++..++.|.++|..+.+.. ... + ...   ....+.+.++..++....++.|.+.
T Consensus       100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vI  177 (266)
T 2iwa_A          100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARI  177 (266)
T ss_dssp             EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE
T ss_pred             EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEE
Confidence            887532122  2335567877777777889999999987766 221 1 111   2344445555444444467899999


Q ss_pred             ecCCCccceeeecccCC----CCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902        341 SILKKVPTHTIPVAHGY----DSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~  396 (454)
                      |..+++.+..+......    ............|+|+|+++ +++++...+.|.+.++...
T Consensus       178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~  238 (266)
T 2iwa_A          178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV  238 (266)
T ss_dssp             ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred             ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence            99999999998764110    00001123479999999986 6666777889999988654

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=99.10  E-value=7.1e-08  Score=93.50  Aligned_cols=284  Identities=12%  Similarity=0.075  Sum_probs=169.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeC--CCc-EEEEec------CCCcEEEEeC-C
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVAN--NNE-LVASGD------NNSNIKLWSS-S  220 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~-~l~~~~------~dg~v~vw~~-~  220 (454)
                      +..|++++.++.|..+|..+++............   ....++  + ...  +++ .|++++      .+|.|..+|. +
T Consensus       117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t  193 (582)
T 1flg_A          117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--I-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT  193 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--E-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--E-eCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence            4678888999999999999999876654321100   011122  1 111  233 566654      3789999998 6


Q ss_pred             CccEEeecccCCC-----------------------------------------eEEEEEcCCCCEEEEEeC--------
Q psy17902        221 LEHLHTFTGHKAP-----------------------------------------ITGLAISFECDTLYSSSN--------  251 (454)
Q Consensus       221 ~~~~~~~~~~~~~-----------------------------------------v~~~~~~~~~~~l~~~~~--------  251 (454)
                      ++.+.........                                         -..+++.|...+++.++.        
T Consensus       194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~  273 (582)
T 1flg_A          194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW  273 (582)
T ss_dssp             CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred             CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence            7766654321100                                         013456677777777663        


Q ss_pred             ------------C----CcEEEEeCCCceeEEEeec--cC--------CceeEEEee-cCC---CEEEEeeCCCcEEEee
Q psy17902        252 ------------D----RSIKVWNIEDRAYVETLFG--HQ--------SAITSLDIL-AKN---RVISSGGTDKSVRVWK  301 (454)
Q Consensus       252 ------------d----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~---~~l~~~~~dg~i~i~d  301 (454)
                                  |    +.|..+|..+++.+..+..  |.        .++. +... .+|   ..++.++.+|.++++|
T Consensus       274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD  352 (582)
T 1flg_A          274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVD  352 (582)
T ss_dssp             GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred             ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEE
Confidence                        2    5899999999998877643  21        1221 1221 356   3788899999999999


Q ss_pred             ccCCeEE-EEcccc-------------CCe------------------EE---------------EEecCCCEEEEEe--
Q psy17902        302 IQEESQL-VFNGHS-------------RGI------------------DM---------------TRRVNDQQFITCG--  332 (454)
Q Consensus       302 ~~~~~~~-~~~~~~-------------~~i------------------~~---------------~~~~~~~~l~~~~--  332 (454)
                      ..+++.+ .+....             .++                  ..               ...+....+++..  
T Consensus       353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~  432 (582)
T 1flg_A          353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH  432 (582)
T ss_dssp             TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred             CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence            9998877 221110             000                  00               0111122333221  


Q ss_pred             -------------------------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        333 -------------------------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       333 -------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                                                     .+|.|..||+.+++.+...+....          +..-.....+.++++
T Consensus       433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagglvf~  502 (582)
T 1flg_A          433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP----------LWAGVLATAGNLVFT  502 (582)
T ss_dssp             EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC----------CCSCCEEETTTEEEE
T ss_pred             cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC----------CcccceEeCCCEEEE
Confidence                                           357899999999998887764321          111112224668888


Q ss_pred             ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCCceeeee-------eeCCCeeEEEEEEee
Q psy17902        382 GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEHRFGRWK-------TIKGVKNTVAIIDIQ  452 (454)
Q Consensus       382 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~~i~~W~-------~~~~~~~~~~~~~~~  452 (454)
                      |+.||.|+.||..+|+.+-.+... ......-+.|..+|+ |+++..|..+.+-+|-       .....-+.+.++.|.
T Consensus       503 g~~dg~l~A~D~~tG~~lW~~~~~-~g~~a~P~~y~~~G~qYv~~~~G~gg~~~~~~~~~~~~~~~~~~g~~~~~f~l~  580 (582)
T 1flg_A          503 GTGDGYFKAFDAKSGKELWKFQTG-SGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLP  580 (582)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECC
T ss_pred             ECCCCcEEEEECCCCCEEEEecCC-CCcccCceEEEECCEEEEEEEccCCCcccccccccccccccCCCCCEEEEEeCC
Confidence            999999999999999998877652 121223367778887 5566656566565551       122334566666654

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=99.10  E-value=6.4e-07  Score=79.72  Aligned_cols=224  Identities=11%  Similarity=0.020  Sum_probs=139.3

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEE
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVET  268 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~  268 (454)
                      .....++|+++++++++-..++.|..|+..+.....+. ....+.++++.++++++++.....  .|..++..+++....
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~  110 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL  110 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence            35678999999997777767899999998665444333 345688999999998666554332  477778777765332


Q ss_pred             ee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE--Ecc---------ccCCeEEEEecCCCEEE-EEeCCC
Q psy17902        269 LF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV--FNG---------HSRGIDMTRRVNDQQFI-TCGEDG  335 (454)
Q Consensus       269 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~---------~~~~i~~~~~~~~~~l~-~~~~dg  335 (454)
                      .. ........++..+.+..+++-..++.|+++|...+....  ...         .......+ .+++..|+ +-+..+
T Consensus       111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg~~lyv~d~~~~  189 (306)
T 2p4o_A          111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFGNFLYVSNTEKM  189 (306)
T ss_dssp             EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEETTEEEEEETTTT
T ss_pred             EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCCCEEEEEeCCCC
Confidence            22 122233455555555555554468889999987643211  111         11122333 55565554 455678


Q ss_pred             CEEEEecCC-Ccc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee--EeccCCCcee
Q psy17902        336 TLSLWSILK-KVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE--FLQDIPLSGV  410 (454)
Q Consensus       336 ~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~  410 (454)
                      .|.+|++.. +..  ...+...          .....++++++|+++++....+.|.+++.. ++...  .+..  ....
T Consensus       190 ~I~~~~~~~~g~~~~~~~~~~~----------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~--~~~~  256 (306)
T 2p4o_A          190 LLLRIPVDSTDKPGEPEIFVEQ----------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ--GVIG  256 (306)
T ss_dssp             EEEEEEBCTTSCBCCCEEEEES----------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG--TCTT
T ss_pred             EEEEEEeCCCCCCCccEEEecc----------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc--ccCC
Confidence            999999864 221  1111100          114568999999987777778899999975 54432  2221  2245


Q ss_pred             eeEEEEc---CCCCEEEEEecC
Q psy17902        411 INSLVFT---SDHKHLVAGIGT  429 (454)
Q Consensus       411 v~~l~~s---~d~~~l~~~~~~  429 (454)
                      +++++|.   |++..|+++...
T Consensus       257 p~~~a~~g~~~d~~~LyVt~~~  278 (306)
T 2p4o_A          257 STAVAFGQTEGDCTAIYVVTNG  278 (306)
T ss_dssp             EEEEEECCSTTTTTEEEEEECT
T ss_pred             ceEEEEecccCCCCEEEEECCC
Confidence            7899999   898888877443

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=99.10  E-value=1.7e-08  Score=99.79  Aligned_cols=280  Identities=9%  Similarity=0.088  Sum_probs=173.7

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCC---C-CCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK---S-YPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~-~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~  227 (454)
                      +..|++++.++.|..+|..+++.+...........   . ...+ ..+++  .+..|++++.++.|..+|. +++.+..+
T Consensus        66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~  143 (668)
T 1kv9_A           66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ  143 (668)
T ss_dssp             TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence            56788888899999999999998877653211100   0 0000 11223  2456888888999999998 78877766


Q ss_pred             cccC----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccC-----------------------
Q psy17902        228 TGHK----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQ-----------------------  273 (454)
Q Consensus       228 ~~~~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~-----------------------  273 (454)
                      ....    ..+.+ ..+  .+..++++..      +|.|..+|..+++.+..+....                       
T Consensus       144 ~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~  221 (668)
T 1kv9_A          144 QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ  221 (668)
T ss_dssp             ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred             ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence            5421    11111 111  1345555543      5899999999999887764210                       


Q ss_pred             --------CceeEEEeecCCCEEEEeeCCC-------------------cEEEeeccCCeEE-EEcc--cc-------CC
Q psy17902        274 --------SAITSLDILAKNRVISSGGTDK-------------------SVRVWKIQEESQL-VFNG--HS-------RG  316 (454)
Q Consensus       274 --------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~-~~~~--~~-------~~  316 (454)
                              .....+++.|...+++.++.++                   .|..+|..+++.. .+..  |.       .+
T Consensus       222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~  301 (668)
T 1kv9_A          222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ  301 (668)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred             eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence                    0112468888888888887765                   3999999999887 3332  21       12


Q ss_pred             eEEEE-ecCCC---EEEEEeCCCCEEEEecCCCccceeeecccC-----CC--CC----------C-----------CCC
Q psy17902        317 IDMTR-RVNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHG-----YD--SS----------S-----------SEP  364 (454)
Q Consensus       317 i~~~~-~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~--~~----------~-----------~~~  364 (454)
                      ..... ..++.   .++.++.+|.++++|..+++.+...+....     ..  ..          .           .-.
T Consensus       302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~  381 (668)
T 1kv9_A          302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH  381 (668)
T ss_dssp             EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred             cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence            22211 12343   588899999999999999988755443210     00  00          0           000


Q ss_pred             CcEEEEEEecCCCEEEEe------------------------------------cCCCcEEEEEcCCCceeeEeccCCCc
Q psy17902        365 NWITSVACLHNSDLVASG------------------------------------SYDGCVKLWKITPKRTLEFLQDIPLS  408 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~------------------------------------~~dg~v~iwd~~~~~~~~~~~~~~~~  408 (454)
                      . -..++++|+..++++.                                    ..+|.|..||+.+++.+-....   .
T Consensus       382 ~-w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~  457 (668)
T 1kv9_A          382 N-WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---P  457 (668)
T ss_dssp             C-SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---S
T ss_pred             C-CCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---C
Confidence            0 0126778876665541                                    1348899999999987765543   2


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      .++....+...+..++++ +.|+.|+.|+..++.
T Consensus       458 ~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~  490 (668)
T 1kv9_A          458 THWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGE  490 (668)
T ss_dssp             SSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             CCCcCceeEeCCCEEEEE-CCcccchhhhhhcCh
Confidence            233334455567888888 789999999876654

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=99.05  E-value=2e-07  Score=83.65  Aligned_cols=243  Identities=11%  Similarity=0.100  Sum_probs=144.9

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccC--------------CCCCCceEEEEEeC-CCcEEEE
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD--------------RKSYPPILALAVAN-NNELVAS  207 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~~~-~~~~l~~  207 (454)
                      ....+++|++++++++++..++.|..|+..++.... +......              ......+..+++.+ ++++++ 
T Consensus        19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v-   96 (322)
T 2fp8_A           19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI-   96 (322)
T ss_dssp             SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-
T ss_pred             CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-
Confidence            345778999999988889899999999887654321 1000000              00113578899997 665444 


Q ss_pred             ecCCCcEEEEeCCCccEEeecc-----cCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCce
Q psy17902        208 GDNNSNIKLWSSSLEHLHTFTG-----HKAPITGLAISF-ECDTLYSSSN-----------------DRSIKVWNIEDRA  264 (454)
Q Consensus       208 ~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~  264 (454)
                      +...+.|..++..+..+..+..     .......+++.+ +|++.++-..                 ++.|..||..+++
T Consensus        97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A           97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence            4434558888875443333321     123478899999 8876665432                 3679999987776


Q ss_pred             eEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEEEeeccCC---eEEEEccccCCeEEEEecCCCEEEEEeC-------
Q psy17902        265 YVETLFGHQSAITSLDILAKNRVISSG-GTDKSVRVWKIQEE---SQLVFNGHSRGIDMTRRVNDQQFITCGE-------  333 (454)
Q Consensus       265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~---~~~~~~~~~~~i~~~~~~~~~~l~~~~~-------  333 (454)
                      ...... .......|+++|+++.|+.+ ...+.|.+|++...   ....+.....+-.....+++.++++...       
T Consensus       177 ~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~~~~~~~~~  255 (322)
T 2fp8_A          177 TTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMH  255 (322)
T ss_dssp             EEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEEEETTSSTT
T ss_pred             EEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEecCccccccc
Confidence            432222 22345679999999866555 55688999998752   2222211222222333345555555443       


Q ss_pred             ---CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        334 ---DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       334 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                         .+.|..+|. .++.+..+....+..     ...++++++ .++.++++....+.|.++++..
T Consensus       256 ~~~~~~v~~~d~-~G~~~~~~~~~~g~~-----~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          256 GRVDPKGIKFDE-FGNILEVIPLPPPFA-----GEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             SCEEEEEEEECT-TSCEEEEEECCTTTT-----TSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred             CCCccEEEEECC-CCCEEEEEECCCCCc-----cccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence               466888886 466666655433210     122566666 4666666666778899998753

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=99.05  E-value=1.5e-07  Score=79.47  Aligned_cols=184  Identities=16%  Similarity=0.126  Sum_probs=126.6

Q ss_pred             eEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE-EeeCCCcEEEeeccCCeEE-E
Q psy17902        234 ITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS-SGGTDKSVRVWKIQEESQL-V  309 (454)
Q Consensus       234 v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~-~  309 (454)
                      ...+.|+ ++.++.+.+.+|  .|+++|+.+++.+..+.... ......+.+.++.|+ +.-.++.+.+||..+.+.+ .
T Consensus        45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t  122 (262)
T 3nol_A           45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS  122 (262)
T ss_dssp             EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred             cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence            4788898 666666777766  89999999999988775433 333322333344444 4446889999999998887 3


Q ss_pred             EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEE
Q psy17902        310 FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVK  389 (454)
Q Consensus       310 ~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~  389 (454)
                      +.....+.. +. +++..|+.+..++.|.++|..+.+.+.++.......    .-..++.+.|. +|.+.+..-.++.|.
T Consensus       123 i~~~~eG~g-lt-~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~----~~~~lNELe~~-~G~lyan~w~~~~I~  195 (262)
T 3nol_A          123 FNYDGEGWG-LT-HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE----ELPELNELEWV-DGEIFANVWQTNKIV  195 (262)
T ss_dssp             EECSSCCCC-EE-ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred             EECCCCceE-Ee-cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc----cccccceeEEE-CCEEEEEEccCCeEE
Confidence            333222222 22 355666666667889999999999988887643110    01225667776 777666666688999


Q ss_pred             EEEcCCCceeeEeccCC----------CceeeeEEEEcCCCCEEEEE
Q psy17902        390 LWKITPKRTLEFLQDIP----------LSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       390 iwd~~~~~~~~~~~~~~----------~~~~v~~l~~s~d~~~l~~~  426 (454)
                      +.|..+++.+..+....          .....+.|||+|+++.|+++
T Consensus       196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT  242 (262)
T 3nol_A          196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT  242 (262)
T ss_dssp             EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred             EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence            99999999888776521          12356899999999888887

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.04  E-value=2.2e-06  Score=86.86  Aligned_cols=285  Identities=12%  Similarity=0.046  Sum_probs=176.5

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-------Cc-ccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-------FV-KTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      ...|.++...++|. |..|+..+-|.+++..+........       .. ....-....|.++...++|. |..|+.++-
T Consensus       257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G  334 (781)
T 3v9f_A          257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG  334 (781)
T ss_dssp             CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred             CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence            45699999888775 5566665668888887654322111       00 00112345799999988886 556666677


Q ss_pred             EEEEeCCCccEEeecc----------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEE
Q psy17902        214 IKLWSSSLEHLHTFTG----------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLD  280 (454)
Q Consensus       214 v~vw~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~  280 (454)
                      |..++........+..          ....|.++...+++. |..|+.++-|..|+..++......   ......|.++.
T Consensus       335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~  413 (781)
T 3v9f_A          335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL  413 (781)
T ss_dssp             EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred             EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence            8888875444333321          235688998887765 666776666999998765432211   12346788998


Q ss_pred             eecCCCEEEEeeCCCcEEEeeccCCeEEEEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902        281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      ..+++.+.+ |+.++.|..++..++....+..   ....+.++.....+.|..|+. +-|.+||..++......... . 
T Consensus       414 ~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~-~-  489 (781)
T 3v9f_A          414 KDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTS-N-  489 (781)
T ss_dssp             ECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTT-T-
T ss_pred             ECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCc-c-
Confidence            877776554 6666779999988776554432   234566776666777888877 55889998776543322111 0 


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                        .......|.++...++|.+.+.....| |..|+..++.. ..+...  -....|.++...++|...+++ . .|.|..
T Consensus       490 --~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~-~Glv~~  563 (781)
T 3v9f_A          490 --SQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT-G-EGLVCF  563 (781)
T ss_dssp             --SSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE-T-TEEEEE
T ss_pred             --cccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE-C-CCceEE
Confidence              001134599999999888655444355 78888766533 233211  124568999999999877665 3 555466


Q ss_pred             eeee
Q psy17902        436 WKTI  439 (454)
Q Consensus       436 W~~~  439 (454)
                      |+..
T Consensus       564 ~d~~  567 (781)
T 3v9f_A          564 PSAR  567 (781)
T ss_dssp             SCTT
T ss_pred             ECCC
Confidence            6654

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.03  E-value=4.1e-07  Score=88.07  Aligned_cols=280  Identities=9%  Similarity=0.000  Sum_probs=168.4

Q ss_pred             CCEEEEEeC-CCeEEEEEc-CCCceecccCCcccCCCC----C-CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE
Q psy17902        154 SKHVYSACK-DGIIIKWLL-ETRSKVCSSPFVKTDRKS----Y-PPILALAVANNNELVASGDNNSNIKLWSS-SLEHLH  225 (454)
Q Consensus       154 ~~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~  225 (454)
                      +..|++++. ++.|.-+|. .+++.+............    . .....+++  .+..|++++.++.|..+|. +++.+.
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W  139 (571)
T 2ad6_A           62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW  139 (571)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence            456777777 899999999 898887766542210000    0 00011223  2456788888999999998 777776


Q ss_pred             eecccC----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCc-------------------
Q psy17902        226 TFTGHK----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSA-------------------  275 (454)
Q Consensus       226 ~~~~~~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~-------------------  275 (454)
                      .+....    ..+.+ ...  .+..+++++.      ++.|..+|..+++.+..+......                   
T Consensus       140 ~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~  217 (571)
T 2ad6_A          140 EVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF  217 (571)
T ss_dssp             EEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred             EecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence            654221    01211 111  1345666554      789999999999988776532111                   


Q ss_pred             -------------------eeEEEeecCCCEEEEeeCC----------------CcEEEeeccCCeEE-EEcc--c----
Q psy17902        276 -------------------ITSLDILAKNRVISSGGTD----------------KSVRVWKIQEESQL-VFNG--H----  313 (454)
Q Consensus       276 -------------------v~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~-~~~~--~----  313 (454)
                                         ...+++.+....++.+..+                +.|..+|..+++.. .+..  |    
T Consensus       218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d  297 (571)
T 2ad6_A          218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD  297 (571)
T ss_dssp             SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred             ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence                               0235666766666666532                35999999999887 3322  1    


Q ss_pred             ----cCCeEEEEecCCC---EEEEEeCCCCEEEEecCCCccceeeecccCCC--------C-C-----------------
Q psy17902        314 ----SRGIDMTRRVNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGYD--------S-S-----------------  360 (454)
Q Consensus       314 ----~~~i~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------~-~-----------------  360 (454)
                          ..++..-...++.   .++.++.+|.+.++|..+++.+..........        . .                 
T Consensus       298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~  377 (571)
T 2ad6_A          298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTN  377 (571)
T ss_dssp             CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEE
T ss_pred             cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceE
Confidence                1122211112442   46778889999999999999887765432100        0 0                 


Q ss_pred             -----CCCCCcEEEEEEecCCCEEEEec-------------------------------------CCCcEEEEEcCCCce
Q psy17902        361 -----SSEPNWITSVACLHNSDLVASGS-------------------------------------YDGCVKLWKITPKRT  398 (454)
Q Consensus       361 -----~~~~~~i~~~~~s~~~~~l~~~~-------------------------------------~dg~v~iwd~~~~~~  398 (454)
                           .+...+ ..++++|+..+|++.+                                     .+|.|..||+.+++.
T Consensus       378 ~~P~~~Gg~~w-~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~  456 (571)
T 2ad6_A          378 ICPSAMGFHNQ-GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA  456 (571)
T ss_dssp             ESSCTTCSSCS-CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred             ECCCCccccCC-CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence                 000000 2467888777666643                                     357899999999987


Q ss_pred             eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       399 ~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +-.+..   ...+.+..+...+..++++ +.|+.|+.||..++.
T Consensus       457 ~W~~~~---~~~~~~~~~~t~gg~v~~g-~~dg~l~a~D~~tG~  496 (571)
T 2ad6_A          457 KWTKWE---KFAAWGGTLYTKGGLVWYA-TLDGYLKALDNKDGK  496 (571)
T ss_dssp             EEEEEE---SSCCCSBCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             EEEecC---CCCccceeEEECCCEEEEE-cCCCeEEEEECCCCC
Confidence            766543   2223333333346677776 789999999876654

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=99.03  E-value=1.2e-07  Score=89.62  Aligned_cols=188  Identities=8%  Similarity=0.018  Sum_probs=128.1

Q ss_pred             CCCEEEEEeC-CCcEEEEeCCCceeEEEeec-cCCceeEEEe-e-cCCCEEEEee------------------CCCcEEE
Q psy17902        242 ECDTLYSSSN-DRSIKVWNIEDRAYVETLFG-HQSAITSLDI-L-AKNRVISSGG------------------TDKSVRV  299 (454)
Q Consensus       242 ~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~i  299 (454)
                      ||++|++... ++.|.+.|+.+.++...+.- ....+..+++ + |++.++++++                  .++.+.+
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv  179 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA  179 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence            7788887665 55799999999998774432 2345778887 5 8999998884                  3457899


Q ss_pred             eeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCC--------------------------------------CEEEE
Q psy17902        300 WKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDG--------------------------------------TLSLW  340 (454)
Q Consensus       300 ~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg--------------------------------------~i~iw  340 (454)
                      .|..+.+.. ...-...+-.+...+++.++++.+.+.                                      .|.+.
T Consensus       180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI  259 (595)
T 1fwx_A          180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV  259 (595)
T ss_dssp             EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred             EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence            999987766 222111333344555667766666432                                      47777


Q ss_pred             ecCC--Ccc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCcee---------eEeccCCC
Q psy17902        341 SILK--KVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTL---------EFLQDIPL  407 (454)
Q Consensus       341 d~~~--~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~---------~~~~~~~~  407 (454)
                      |..+  +.. +..++....          ..++.++|||++++++ ..+.+|.++|+.+.+..         ........
T Consensus       260 D~~~~~~~~~~~~Ipvg~~----------PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v  329 (595)
T 1fwx_A          260 DGRKEASSLFTRYIPIANN----------PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL  329 (595)
T ss_dssp             ECSGGGCCSSEEEEEEESS----------CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred             eCcccCCceeEEEEecCCC----------ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence            7776  434 445544321          5679999999966555 46889999999854210         01112234


Q ss_pred             ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        408 SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       408 ~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      ......++|+|+| +++++.--|+.|.+|+...
T Consensus       330 G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~  361 (595)
T 1fwx_A          330 GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED  361 (595)
T ss_dssp             CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred             CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence            5568889999999 8888878999999999865

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=99.03  E-value=3.9e-08  Score=97.38  Aligned_cols=272  Identities=11%  Similarity=0.024  Sum_probs=149.9

Q ss_pred             EEEEcC-CCCEEEEEeCCC-----------eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCc
Q psy17902        147 CIAVTS-DSKHVYSACKDG-----------IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSN  213 (454)
Q Consensus       147 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~  213 (454)
                      ++++.+ ++++++.|+.+.           .+.+||..+..-.......   ..+.....++++..+++++++|+. +..
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~---~~~~~~~~~~~~~~~g~lyv~GG~~~~~  266 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV---TKHDMFCPGISMDGNGQIVVTGGNDAKK  266 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE---CSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC---CCCCCccccccCCCCCCEEEeCCCCCCc
Confidence            556667 888888887543           5888998876532211110   112223345677889999999984 458


Q ss_pred             EEEEeCCCccEEeecc-cCC-CeEEEEEcCCCCEEEEEe-CC-----CcEEEEeCCCceeEEEe----eccCCceeEEEe
Q psy17902        214 IKLWSSSLEHLHTFTG-HKA-PITGLAISFECDTLYSSS-ND-----RSIKVWNIEDRAYVETL----FGHQSAITSLDI  281 (454)
Q Consensus       214 v~vw~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~----~~~~~~v~~~~~  281 (454)
                      +.+||.....-..+.. +.. .-.+++..+++++++.|+ .+     ..+.+||..+.+....-    ......-....+
T Consensus       267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~  346 (656)
T 1k3i_A          267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY  346 (656)
T ss_dssp             EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred             eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence            9999983322222211 111 123455667899999988 34     56999999877643320    000000000112


Q ss_pred             ecCCCEEEEeeCCC---------cEEEeeccCCeEEEEcc-cc---------CCeEEEEe--cCCCEEEEEeCCC-----
Q psy17902        282 LAKNRVISSGGTDK---------SVRVWKIQEESQLVFNG-HS---------RGIDMTRR--VNDQQFITCGEDG-----  335 (454)
Q Consensus       282 ~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~-~~---------~~i~~~~~--~~~~~l~~~~~dg-----  335 (454)
                      ..++..++.|+.+|         .+..||..+.......+ ..         ..-.++.+  .++..++.|+.++     
T Consensus       347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~  426 (656)
T 1k3i_A          347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD  426 (656)
T ss_dssp             TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred             ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence            23444445554443         46788887765432111 11         11123332  2566677777432     


Q ss_pred             ------CEEEEecCCCccceee--ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----------CcEEEEEcCCC
Q psy17902        336 ------TLSLWSILKKVPTHTI--PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----------GCVKLWKITPK  396 (454)
Q Consensus       336 ------~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~v~iwd~~~~  396 (454)
                            .|.+||..+..-....  ...        ....-.++...|++++++.|+.+           ..+.+||..++
T Consensus       427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp--------~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~  498 (656)
T 1k3i_A          427 ATTNAHIITLGEPGTSPNTVFASNGLY--------FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD  498 (656)
T ss_dssp             CCCCEEEEECCSTTSCCEEEECTTCCS--------SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred             cCCcceEEEcCCCCCCCeeEEccCCCC--------CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence                  5778887665432221  111        11113345667899999999864           46899999775


Q ss_pred             ceeeEeccCCCcee-eeEEEEcCCCCEEEEEecCC
Q psy17902        397 RTLEFLQDIPLSGV-INSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       397 ~~~~~~~~~~~~~~-v~~l~~s~d~~~l~~~~~~d  430 (454)
                      + ...+...+.... ..+..+.|||+.+++|++.+
T Consensus       499 ~-W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~  532 (656)
T 1k3i_A          499 T-FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLC  532 (656)
T ss_dssp             E-EEECCCCSSCCCTTEEEEECTTSCEEEEECCCC
T ss_pred             c-eeecCCCCCccccccHhhcCCCcEEEecCCCCC
Confidence            4 223332222222 23455679999999885433

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.02  E-value=3.1e-07  Score=88.95  Aligned_cols=283  Identities=7%  Similarity=-0.022  Sum_probs=167.6

Q ss_pred             CCEEEEEeC-CCeEEEEEc-CCCceecccCCcccCCCC-----CCceEEEEEeCCCcE----EEEecCCCcEEEEeC-CC
Q psy17902        154 SKHVYSACK-DGIIIKWLL-ETRSKVCSSPFVKTDRKS-----YPPILALAVANNNEL----VASGDNNSNIKLWSS-SL  221 (454)
Q Consensus       154 ~~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~----l~~~~~dg~v~vw~~-~~  221 (454)
                      +..|++++. ++.|.-+|. .+++.+............     ......++++|.+..    |++++.++.|..+|. ++
T Consensus        62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG  141 (599)
T 1w6s_A           62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG  141 (599)
T ss_dssp             TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred             CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence            456777777 889999999 899887766542211000     001122455443334    788888999999998 77


Q ss_pred             ccEEeecccC----CCeEE-EEEcCCCCEEEEEe------CCCcEEEEeCCCceeEEEeeccCCc---------------
Q psy17902        222 EHLHTFTGHK----APITG-LAISFECDTLYSSS------NDRSIKVWNIEDRAYVETLFGHQSA---------------  275 (454)
Q Consensus       222 ~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~---------------  275 (454)
                      +.+.......    ..+.+ -.+. ++ .+++++      .+|.|+.+|..+++.+..+......               
T Consensus       142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~  219 (599)
T 1w6s_A          142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH  219 (599)
T ss_dssp             CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred             CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence            7776654321    01111 1111 33 555555      3799999999999988776532111               


Q ss_pred             ----------------------e-eEEEeecCCCEEEEeeCC----------------CcEEEeeccCCeEE-EEccccC
Q psy17902        276 ----------------------I-TSLDILAKNRVISSGGTD----------------KSVRVWKIQEESQL-VFNGHSR  315 (454)
Q Consensus       276 ----------------------v-~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~-~~~~~~~  315 (454)
                                            + ..+++.+...+++.+..+                +.|..+|..+++.. .+.....
T Consensus       220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~  299 (599)
T 1w6s_A          220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH  299 (599)
T ss_dssp             GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred             ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence                                  0 135566777777777655                37999999999887 3332211


Q ss_pred             ---------CeEEEEe--cCC---CEEEEEeCCCCEEEEecCCCccceeeecccCC------CCCCC-------------
Q psy17902        316 ---------GIDMTRR--VND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGY------DSSSS-------------  362 (454)
Q Consensus       316 ---------~i~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~-------------  362 (454)
                               ....+..  .++   ..++.++.+|.+.++|..+++.+.........      .....             
T Consensus       300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~  379 (599)
T 1w6s_A          300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMD  379 (599)
T ss_dssp             CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTT
T ss_pred             ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCC
Confidence                     1111222  245   35677889999999999999988776543200      00000             


Q ss_pred             CCCc-----------EEEEEEecCCCEEEEe---------------------------------c------CCCcEEEEE
Q psy17902        363 EPNW-----------ITSVACLHNSDLVASG---------------------------------S------YDGCVKLWK  392 (454)
Q Consensus       363 ~~~~-----------i~~~~~s~~~~~l~~~---------------------------------~------~dg~v~iwd  392 (454)
                      ....           -..++++|+..+|++.                                 +      ..|.|..||
T Consensus       380 ~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D  459 (599)
T 1w6s_A          380 HLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYN  459 (599)
T ss_dssp             CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEEC
T ss_pred             CCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEE
Confidence            0000           1235667666555442                                 1      357899999


Q ss_pred             cCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        393 ITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +.+++.+-....   ..++.+-.+.-.+..++++ +.|+.|+.||..++.
T Consensus       460 ~~tG~~~W~~~~---~~~~~~g~~~tagg~vf~g-t~dg~l~A~D~~tG~  505 (599)
T 1w6s_A          460 AITGDYKWEKME---RFAVWGGTMATAGDLVFYG-TLDGYLKARDSDTGD  505 (599)
T ss_dssp             TTTCCEEEEEEE---SSCCCSBCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             CCCCCEEeEecC---CCCccCcceEecCCEEEEE-CCCCeEEEEECCCCC
Confidence            999977655542   1122211122346677776 689999988876664

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=99.01  E-value=1.2e-07  Score=80.03  Aligned_cols=182  Identities=11%  Similarity=0.070  Sum_probs=127.0

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeE--EEeecCCCEEEEeeCCCcEEEeeccCCeEE-EE
Q psy17902        234 ITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITS--LDILAKNRVISSGGTDKSVRVWKIQEESQL-VF  310 (454)
Q Consensus       234 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~  310 (454)
                      ...+.|+ ++.++++.+.+|.|+++|+.+++.+..+ - ......  +++.. +.+.++.-.++.+.+||..+.+.+ .+
T Consensus        57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti  132 (268)
T 3nok_A           57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT  132 (268)
T ss_dssp             EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred             cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence            4688887 4566777788899999999999988776 2 223333  55432 244444557899999999998887 33


Q ss_pred             ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902        311 NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL  390 (454)
Q Consensus       311 ~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  390 (454)
                      .....+..+.  +++..|+.+..++.|.++|..+.+.+.++.......    .-..++.+.|. +|.+.+....++.|.+
T Consensus       133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~----~v~~lNeLe~~-dG~lyanvw~s~~I~v  205 (268)
T 3nok_A          133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ----PVELINELECA-NGVIYANIWHSSDVLE  205 (268)
T ss_dssp             ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred             eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc----ccccccccEEe-CCEEEEEECCCCeEEE
Confidence            3322222222  456677777778999999999999888887643211    11226777877 7766666656789999


Q ss_pred             EEcCCCceeeEeccCC-----------CceeeeEEEEcCCCCEEEEE
Q psy17902        391 WKITPKRTLEFLQDIP-----------LSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       391 wd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~~~  426 (454)
                      .|..+++.+..+....           .....+.|+|+|+++.|+++
T Consensus       206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT  252 (268)
T 3nok_A          206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT  252 (268)
T ss_dssp             ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred             EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence            9999998888776421           12357899999988777776

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=99.00  E-value=3.2e-06  Score=75.89  Aligned_cols=279  Identities=10%  Similarity=0.006  Sum_probs=152.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      -...+.+|.|.+.+..+++ +..|.| +...+.++.-.......  ......+.+|.|.+ +..+++| ..|.|..-.-.
T Consensus        34 ~~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~--~~~~~~~~~i~~~~-~~~~~~g-~~g~i~~S~Dg  107 (327)
T 2xbg_A           34 TTATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVL--DHSDYRFNSVSFQG-NEGWIVG-EPPIMLHTTDG  107 (327)
T ss_dssp             CSSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCC--SCCCCEEEEEEEET-TEEEEEE-ETTEEEEESST
T ss_pred             CCCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCC--CCCCccEEEEEecC-CeEEEEE-CCCeEEEECCC
Confidence            3457999999877777774 556765 33444443222211100  01234688999986 4545544 45655442212


Q ss_pred             CccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        221 LEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       221 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      +..-....   .+...+..+.+.+++..++++ .+|.|.. ....+...... ..+...+..+.+.+++.+++++. .|.
T Consensus       108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~  184 (327)
T 2xbg_A          108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS  184 (327)
T ss_dssp             TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred             CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence            22212211   234567788887666555544 5665533 22223322222 34556788999999888777664 444


Q ss_pred             EEE-eec--cCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        297 VRV-WKI--QEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       297 i~i-~d~--~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      ++. +|-  .+-..+. ......+..+.+.+++.+++++.+|.+++.+...+..-..+.... .    .....+.++.+.
T Consensus       185 ~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~-~----~~~~~~~~v~~~  258 (327)
T 2xbg_A          185 FYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPL-R----RNSVGFLDLAYR  258 (327)
T ss_dssp             EEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTT-S----SCCSCEEEEEES
T ss_pred             EEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCc-c----cCCcceEEEEec
Confidence            433 342  2223322 233345555555555566677778887776422232222221110 0    011238889999


Q ss_pred             cCCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +++.+++++. +|.| ++....+.....+... .....+.++.|.+++. ++++ |.+|.|..++-
T Consensus       259 ~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~-G~~G~i~~~~~  320 (327)
T 2xbg_A          259 TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFIL-GQKGILLRYVT  320 (327)
T ss_dssp             SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEE-CSTTEEEEECC
T ss_pred             CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEE-cCCceEEEEcC
Confidence            8887777665 6666 5566667766665531 1235678899986655 4444 67888876654

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=99.00  E-value=1.8e-07  Score=90.52  Aligned_cols=268  Identities=10%  Similarity=0.036  Sum_probs=159.7

Q ss_pred             EEEcCCCCE----EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEec------CCCcEEE
Q psy17902        148 IAVTSDSKH----VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGD------NNSNIKL  216 (454)
Q Consensus       148 ~~~s~~~~~----l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~------~dg~v~v  216 (454)
                      ++++|.+..    |++++.|+.|..+|..+++.............  ..+.+ -.+. ++ .+++++      .+|.|+.
T Consensus       111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~--~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A  186 (599)
T 1w6s_A          111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVG--STLTIAPYVV-KD-KVIIGSSGAELGVRGYLTA  186 (599)
T ss_dssp             CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT--CBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEE
T ss_pred             eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCcc--ceeecCCEEE-CC-EEEEEecccccCCCCeEEE
Confidence            345444444    88888999999999999988766543110000  01111 1111 44 455554      3789999


Q ss_pred             EeC-CCccEEeecccCCC-------------------------------------e-EEEEEcCCCCEEEEEeCC-----
Q psy17902        217 WSS-SLEHLHTFTGHKAP-------------------------------------I-TGLAISFECDTLYSSSND-----  252 (454)
Q Consensus       217 w~~-~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d-----  252 (454)
                      +|. +++.+..+......                                     + ..+++.+...+++.++.+     
T Consensus       187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~  266 (599)
T 1w6s_A          187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN  266 (599)
T ss_dssp             EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred             EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence            999 67777665432111                                     0 134566777788877665     


Q ss_pred             -----------CcEEEEeCCCceeEEEeeccCC----------ceeEEEee-cCC---CEEEEeeCCCcEEEeeccCCeE
Q psy17902        253 -----------RSIKVWNIEDRAYVETLFGHQS----------AITSLDIL-AKN---RVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       253 -----------g~i~iwd~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                                 +.|..+|..+++.+..+.....          ++. +... .+|   ..++.++.+|.++++|..+++.
T Consensus       267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~  345 (599)
T 1w6s_A          267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL  345 (599)
T ss_dssp             GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred             CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence                       3799999999998877654221          121 2222 456   5677788999999999999887


Q ss_pred             E-EEccc-------------cCCe---------------------------EEEEecCCCEEEEE---------------
Q psy17902        308 L-VFNGH-------------SRGI---------------------------DMTRRVNDQQFITC---------------  331 (454)
Q Consensus       308 ~-~~~~~-------------~~~i---------------------------~~~~~~~~~~l~~~---------------  331 (454)
                      + .....             ..++                           .....+..+++++.               
T Consensus       346 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~  425 (599)
T 1w6s_A          346 VSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPY  425 (599)
T ss_dssp             EEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred             eecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccc
Confidence            7 22110             0000                           00111111222111               


Q ss_pred             ------------------e------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902        332 ------------------G------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       332 ------------------~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                                        +      ..|.|..||+.+++.+...+....          ...-.+...+.+++.++.||.
T Consensus       426 ~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagg~vf~gt~dg~  495 (599)
T 1w6s_A          426 KAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA----------VWGGTMATAGDLVFYGTLDGY  495 (599)
T ss_dssp             CTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC----------CCSBCEEETTTEEEEECTTSE
T ss_pred             cCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC----------ccCcceEecCCEEEEECCCCe
Confidence                              1      357899999999988887764321          111112235668888999999


Q ss_pred             EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCC
Q psy17902        388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEH  431 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~  431 (454)
                      |+.||..+|+.+-.+... ......-+.+..+|+ |+++..|..+
T Consensus       496 l~A~D~~tG~~lW~~~l~-~g~~~~P~~y~~~G~qyv~~~~G~g~  539 (599)
T 1w6s_A          496 LKARDSDTGDLLWKFKIP-SGAIGYPMTYTHKGTQYVAIYYGVGG  539 (599)
T ss_dssp             EEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCT
T ss_pred             EEEEECCCCCEEEEeeCC-CCcEeccEEEEeCCEEEEEEEccCCc
Confidence            999999999988777542 222233466677887 4555545433

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=99.00  E-value=1.6e-06  Score=87.78  Aligned_cols=282  Identities=10%  Similarity=0.014  Sum_probs=174.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc---ccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV---KTDRKSYPPILALAVANNNELVASGDNNSNIKLW  217 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw  217 (454)
                      ....|.++...++|+ |..|+.++-|..|+..+..........   .........|.++...++|. |..|+.++-|.+|
T Consensus       311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~  388 (781)
T 3v9f_A          311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVF  388 (781)
T ss_dssp             SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEE
T ss_pred             CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEE
Confidence            346799999988875 666777777888887654332211000   00111335699999888876 4455655668888


Q ss_pred             eCCCccEEee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEe
Q psy17902        218 SSSLEHLHTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       218 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~  291 (454)
                      +........+    ......|.++...+++. |..|+.++-|..++..+++......  .....|.++...+++.+.+ |
T Consensus       389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-g  466 (781)
T 3v9f_A          389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-G  466 (781)
T ss_dssp             ETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-E
T ss_pred             ECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-E
Confidence            8754433332    12346788888877765 5567776779999988776433221  1346788998887776544 5


Q ss_pred             eCCCcEEEeeccCCeEEEEccc------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        292 GTDKSVRVWKIQEESQLVFNGH------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~~------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      +. +.|.+||..++....+...      ...+.++.....+.|..|+..+-|..||..+.... .+....+.     ...
T Consensus       467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~l-----~~~  539 (781)
T 3v9f_A          467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR-KFNQYEGF-----CSN  539 (781)
T ss_dssp             ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE-EECTTTTC-----SCS
T ss_pred             EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE-EccCCCCC-----CCC
Confidence            55 5688999887655433221      24566666666667777887555888987665432 22221111     234


Q ss_pred             cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .|.++...++|.+.++.. +|.|..||..+++. ..+...  -....|.++...++|...+++  ..| |..++.
T Consensus       540 ~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~G-l~~~~~  609 (781)
T 3v9f_A          540 TINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST--NTG-ISCYIT  609 (781)
T ss_dssp             CEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC--SSC-EEEEET
T ss_pred             eeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc--CCc-eEEEEC
Confidence            599999999988655544 67558888776543 222211  123458899999988876654  333 555543

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=99.00  E-value=1.6e-07  Score=90.92  Aligned_cols=257  Identities=9%  Similarity=0.029  Sum_probs=156.2

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecC------CCcEEEEeC-CCccEE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDN------NSNIKLWSS-SLEHLH  225 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~~~  225 (454)
                      +..|++++.|+.|..+|..+++.............  ..+.+ .... ++ .+++++.      +|.|..+|. +++.+.
T Consensus       115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~--~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W  190 (571)
T 2ad6_A          115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG--STLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKW  190 (571)
T ss_dssp             TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT--CBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc--ceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence            46788888999999999999988766543211000  01110 1111 44 4555543      789999999 677776


Q ss_pred             eecccCCC--------------------------------------eEEEEEcCCCCEEEEEeCC---------------
Q psy17902        226 TFTGHKAP--------------------------------------ITGLAISFECDTLYSSSND---------------  252 (454)
Q Consensus       226 ~~~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d---------------  252 (454)
                      .+......                                      ...+++.+....++.++.+               
T Consensus       191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y  270 (571)
T 2ad6_A          191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW  270 (571)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence            65432110                                      0235666766677766532               


Q ss_pred             -CcEEEEeCCCceeEEEeecc--C--------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEE-EEcccc---
Q psy17902        253 -RSIKVWNIEDRAYVETLFGH--Q--------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQL-VFNGHS---  314 (454)
Q Consensus       253 -g~i~iwd~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~-~~~~~~---  314 (454)
                       +.|..+|..+++.+..+...  .        .++. +....+|+   .++.++.+|.++++|..+++.+ ......   
T Consensus       271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~  349 (571)
T 2ad6_A          271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN  349 (571)
T ss_dssp             TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence             35999999999988776532  1        2221 22224673   5777889999999999998876 221110   


Q ss_pred             ----------CCe---------------------------EEEEecCCCEEEEEe-------------------------
Q psy17902        315 ----------RGI---------------------------DMTRRVNDQQFITCG-------------------------  332 (454)
Q Consensus       315 ----------~~i---------------------------~~~~~~~~~~l~~~~-------------------------  332 (454)
                                .++                           .....+...++++.+                         
T Consensus       350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~  429 (571)
T 2ad6_A          350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL  429 (571)
T ss_dssp             SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence                      000                           011222334444432                         


Q ss_pred             ------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee
Q psy17902        333 ------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       333 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                                  .+|.|..||+.+++.+..+.....          +....+...+.++++++.||.|+.||..+++.+.
T Consensus       430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~----------~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw  499 (571)
T 2ad6_A          430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA----------AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW  499 (571)
T ss_dssp             EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC----------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred             eeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC----------ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence                        357899999999988887764321          1122223356678889999999999999999887


Q ss_pred             EeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        401 FLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       401 ~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      .+... ....-..+.+..+|+.+++.
T Consensus       500 ~~~~~-~~~~~~p~~~~~~G~~yv~~  524 (571)
T 2ad6_A          500 NFKMP-SGGIGSPMTYSFKGKQYIGS  524 (571)
T ss_dssp             EEECS-SCCCSCCEEEEETTEEEEEE
T ss_pred             EEeCC-CCcEeeeEEEEECCEEEEEE
Confidence            77642 11112234566788765544

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.99  E-value=5.4e-07  Score=75.50  Aligned_cols=186  Identities=12%  Similarity=0.117  Sum_probs=126.1

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEeeccCCc-eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        232 APITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLFGHQSA-ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      .....+.|++ +.++.+.+.+|  .|+.+|+.+++.+..+...... --.+++. .+.+....-.++.+.+||..+.+.+
T Consensus        21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~   98 (243)
T 3mbr_X           21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR   98 (243)
T ss_dssp             CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred             cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence            3466899986 55556666654  8999999999998877533222 1234443 2344444557899999999998887


Q ss_pred             -EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902        309 -VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       309 -~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                       .+.....+.. +. .++..|+++..++.|.++|..+.+.+.++.......    .-..++.+.+. +|.+.+..-.+..
T Consensus        99 ~ti~~~~~Gwg-lt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~----~~~~lNeLe~~-~G~lyanvw~s~~  171 (243)
T 3mbr_X           99 ARFRYPGEGWA-LT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR----PLDNLNELEWV-NGELLANVWLTSR  171 (243)
T ss_dssp             EEEECSSCCCE-EE-ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred             EEEeCCCCceE-Ee-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc----ccccceeeEEe-CCEEEEEECCCCe
Confidence             3333333332 22 345566666668899999999999888887643110    01226667766 6766666656779


Q ss_pred             EEEEEcCCCceeeEeccC-----------CCceeeeEEEEcCCCCEEEEE
Q psy17902        388 VKLWKITPKRTLEFLQDI-----------PLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       388 v~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      |.+.|..+++.+..+...           +.....+.|+++|+++.|+++
T Consensus       172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT  221 (243)
T 3mbr_X          172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT  221 (243)
T ss_dssp             EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred             EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence            999999999888877632           122457899999998888877

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.98  E-value=1.9e-07  Score=78.94  Aligned_cols=188  Identities=12%  Similarity=0.016  Sum_probs=124.6

Q ss_pred             ceEEEEEeCCCcEEEEecCCC--cEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEE
Q psy17902        192 PILALAVANNNELVASGDNNS--NIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVE  267 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg--~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~  267 (454)
                      -...+.|+ ++.++.+++.+|  .|+++|+ +++.+..+... .........++++.|+... .++.+.+||..+.+.+.
T Consensus        44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~  121 (262)
T 3nol_A           44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR  121 (262)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred             ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence            45788998 677677776665  8999999 66666666533 3444433333455666655 48899999999999998


Q ss_pred             EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEcc----cc-CCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902        268 TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNG----HS-RGIDMTRRVNDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       268 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~----~~-~~i~~~~~~~~~~l~~~~~dg~i~iwd  341 (454)
                      ++.... .-..++  +++..|+.+..++.|.++|..+.+.. ...-    .. ..++-+.+.++..++..-.++.|.+.|
T Consensus       122 ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vID  198 (262)
T 3nol_A          122 SFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRID  198 (262)
T ss_dssp             EEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred             EEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEE
Confidence            886432 223344  56777776666788999999988776 2111    11 223345555665444444788999999


Q ss_pred             cCCCccceeeecccCCCC---CCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        342 ILKKVPTHTIPVAHGYDS---SSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      ..+++.+..+........   ........+.|+|+|+++.|++.+.
T Consensus       199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK  244 (262)
T 3nol_A          199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK  244 (262)
T ss_dssp             TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred             CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence            999999998886432111   1112345899999998876665554

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.98  E-value=4.1e-07  Score=81.66  Aligned_cols=235  Identities=9%  Similarity=-0.009  Sum_probs=144.6

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecc--------------------cCCCeEEEEEcCCCCEEEEEeC
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTG--------------------HKAPITGLAISFECDTLYSSSN  251 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~~~  251 (454)
                      ...+++|.+++++++++..++.|..|+..+..+..+..                    ....+.++++.++...|+++..
T Consensus        20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~   99 (322)
T 2fp8_A           20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC   99 (322)
T ss_dssp             CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred             CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence            45568899999878888888999999986544443321                    1135788999973345666655


Q ss_pred             CCcEEEEeCCCceeEEEeec-----cCCceeEEEeec-CCCEEEEeeC-----------------CCcEEEeeccCCeEE
Q psy17902        252 DRSIKVWNIEDRAYVETLFG-----HQSAITSLDILA-KNRVISSGGT-----------------DKSVRVWKIQEESQL  308 (454)
Q Consensus       252 dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~~~~~  308 (454)
                      .+.|..+|..++... .+..     .......+++.+ +|++.++-..                 ++.|..||..++...
T Consensus       100 ~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~  178 (322)
T 2fp8_A          100 YYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT  178 (322)
T ss_dssp             TTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred             CCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence            566889998765432 2211     113467899999 8887765432                 367888888766654


Q ss_pred             EEccc-cCCeEEEEecCCCEEEEE-eCCCCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        309 VFNGH-SRGIDMTRRVNDQQFITC-GEDGTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       309 ~~~~~-~~~i~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      .+... ..+......++++.|+.+ +..+.|.+|++.....  ...+.  . .      .. ...++++++|++.++...
T Consensus       179 ~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~------~g-P~gi~~d~~G~l~va~~~  248 (322)
T 2fp8_A          179 LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-I------PN-PGNIKRNADGHFWVSSSE  248 (322)
T ss_dssp             EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-C------SS-EEEEEECTTSCEEEEEEE
T ss_pred             EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE--e-C------CC-CCCeEECCCCCEEEEecC
Confidence            32222 222233344455655544 5678999999875321  11111  0 0      12 677999999986666544


Q ss_pred             ----------CCcEEEEEcCCCceeeEeccCCC--ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        385 ----------DGCVKLWKITPKRTLEFLQDIPL--SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       385 ----------dg~v~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                                .+.|..++.. ++.+..+.....  ...++++++. + ..|+++....+.|.+++...
T Consensus       249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~  313 (322)
T 2fp8_A          249 ELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDK  313 (322)
T ss_dssp             ETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC--
T ss_pred             cccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccc
Confidence                      4668888864 666666654211  2346677773 4 45666646788888887643

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.98  E-value=6.5e-07  Score=75.04  Aligned_cols=189  Identities=11%  Similarity=-0.008  Sum_probs=123.7

Q ss_pred             CCceEEEEEeCCCcEEEEecCC--CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCcee
Q psy17902        190 YPPILALAVANNNELVASGDNN--SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAY  265 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~d--g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~  265 (454)
                      ..-...+.|++ +.++.+.+..  +.|+++|+ +++.+..+... ...........++.|+.. -.++.+.+||..+.+.
T Consensus        20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~   97 (243)
T 3mbr_X           20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP   97 (243)
T ss_dssp             TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred             ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence            34567899986 5666666654  48999999 66666665432 233333233334555544 4688999999999999


Q ss_pred             EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc--ccc---CCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902        266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN--GHS---RGIDMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~--~~~---~~i~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                      +.++.... .-..++  +++..|+.+..++.|.++|..+.+.. ...  .+.   ..++-+.+.++..++..-.+..|.+
T Consensus        98 ~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~v  174 (243)
T 3mbr_X           98 RARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIAR  174 (243)
T ss_dssp             EEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEE
T ss_pred             EEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEE
Confidence            98886433 224454  46766666667889999999988776 221  111   2334455556655555547889999


Q ss_pred             EecCCCccceeeecccCCCCC----CCCCCcEEEEEEecCCCEEEEec
Q psy17902        340 WSILKKVPTHTIPVAHGYDSS----SSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      .|..+++.+..+.........    .......+.|+++|+++.|++.+
T Consensus       175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG  222 (243)
T 3mbr_X          175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG  222 (243)
T ss_dssp             ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred             EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence            999999999998866432211    11234589999999877555544

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.91  E-value=1.6e-06  Score=84.11  Aligned_cols=282  Identities=9%  Similarity=0.009  Sum_probs=163.0

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC--CCc-eEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecc
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS--YPP-ILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTG  229 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~-v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~  229 (454)
                      +..|++++.++.|..+|..+++.+............  ... ...+++  .+..|++++.++.|..+|. +++.+..+..
T Consensus        68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~  145 (582)
T 1flg_A           68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF  145 (582)
T ss_dssp             TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred             CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence            345666666455999999999887765432211000  000 011222  2446777888999999999 7777766543


Q ss_pred             cCC----CeE-EEEEcC---CCC-EEEEEe------CCCcEEEEeCCCceeEEEeeccCCce------------------
Q psy17902        230 HKA----PIT-GLAISF---ECD-TLYSSS------NDRSIKVWNIEDRAYVETLFGHQSAI------------------  276 (454)
Q Consensus       230 ~~~----~v~-~~~~~~---~~~-~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~v------------------  276 (454)
                      ...    .+. +-....   +++ .+++++      .+|.|+.+|..+++.+.........+                  
T Consensus       146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~  225 (582)
T 1flg_A          146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS  225 (582)
T ss_dssp             SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred             CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence            220    111 111111   233 566654      37899999999998876553211000                  


Q ss_pred             -----------------------eEEEeecCCCEEEEeeC--------------------C----CcEEEeeccCCeEE-
Q psy17902        277 -----------------------TSLDILAKNRVISSGGT--------------------D----KSVRVWKIQEESQL-  308 (454)
Q Consensus       277 -----------------------~~~~~~~~~~~l~~~~~--------------------d----g~i~i~d~~~~~~~-  308 (454)
                                             ..+++.|...+++.+..                    |    +.|..+|..+++.. 
T Consensus       226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W  305 (582)
T 1flg_A          226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW  305 (582)
T ss_dssp             SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred             CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence                                   13456677777776653                    2    58999999999888 


Q ss_pred             EEcc--cc--------CCeEEEEe--cCC---CEEEEEeCCCCEEEEecCCCccceeeecccCCC---------------
Q psy17902        309 VFNG--HS--------RGIDMTRR--VND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD---------------  358 (454)
Q Consensus       309 ~~~~--~~--------~~i~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------  358 (454)
                      .+..  |.        .++ .+..  .++   ..++.++.+|.++++|..+++.+..+.......               
T Consensus       306 ~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~  384 (582)
T 1flg_A          306 FYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER  384 (582)
T ss_dssp             EEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred             EEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence            3322  21        122 2222  244   367788999999999999999887766532100               


Q ss_pred             --CCC--------CCCCc-----------EEEEEEecCCCEEEEec---------------------------------C
Q psy17902        359 --SSS--------SEPNW-----------ITSVACLHNSDLVASGS---------------------------------Y  384 (454)
Q Consensus       359 --~~~--------~~~~~-----------i~~~~~s~~~~~l~~~~---------------------------------~  384 (454)
                        ...        .....           -..++++|+..++++..                                 .
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~  464 (582)
T 1flg_A          385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH  464 (582)
T ss_dssp             TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred             cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence              000        00000           01356666555444422                                 3


Q ss_pred             CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        385 DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       385 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +|.|..||+.+++.+-.....   .++..-.....+..++++ +.|+.|+.||..++.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG~  518 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTG-TGDGYFKAFDAKSGK  518 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred             cceEEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEE-CCCCcEEEEECCCCC
Confidence            688999999999876555421   122221222236677777 689999998876654

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.87  E-value=5.9e-07  Score=75.89  Aligned_cols=186  Identities=9%  Similarity=-0.003  Sum_probs=122.7

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEe
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~  269 (454)
                      -...+.|+ ++.+..+.+.+|.|+++|+ +++.+..+  -..........+.++.|+.. -.++.+.+||..+.+.+.++
T Consensus        56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti  132 (268)
T 3nok_A           56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT  132 (268)
T ss_dssp             CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred             ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence            45788887 4677778888899999999 66666665  23344332233344444444 46889999999999999888


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc--cccC---CeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN--GHSR---GIDMTRRVNDQQFITCGEDGTLSLWSIL  343 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~--~~~~---~i~~~~~~~~~~l~~~~~dg~i~iwd~~  343 (454)
                      ... ..-..++  +++..|+.+..++.|.++|..+.+.. ...  .+..   .++-+.+.++..++....+..|.+.|..
T Consensus       133 ~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~  209 (268)
T 3nok_A          133 RYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPA  209 (268)
T ss_dssp             ECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred             eCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence            643 2224455  46777777777899999999988776 221  1221   2344555666544444468899999999


Q ss_pred             CCccceeeecccCCC----CCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902        344 KKVPTHTIPVAHGYD----SSSSEPNWITSVACLHNSD-LVASGS  383 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~s~~~~-~l~~~~  383 (454)
                      +++.+..+.......    .........+.|+++|+++ +++||-
T Consensus       210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK  254 (268)
T 3nok_A          210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK  254 (268)
T ss_dssp             TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred             CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence            999999888652110    0011234589999999766 555553

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.81  E-value=8.4e-06  Score=72.40  Aligned_cols=226  Identities=13%  Similarity=0.056  Sum_probs=130.6

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--cEEEEeCC
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--NIKLWSSS  220 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~~  220 (454)
                      .....++|+++++++++-..++.|..||.... ....+.       ....+..+++.++++++++.....  .|..++..
T Consensus        32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~  103 (306)
T 2p4o_A           32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS  103 (306)
T ss_dssp             CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred             CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence            56789999999987777667899999988753 222221       123688999999999666554322  46667763


Q ss_pred             CccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-EEEee---------ccCCceeEEEeecCCCEE
Q psy17902        221 LEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-VETLF---------GHQSAITSLDILAKNRVI  288 (454)
Q Consensus       221 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~---------~~~~~v~~~~~~~~~~~l  288 (454)
                      ...+..+..  .......++..+++..+++-..++.|+++|..++.. +....         ..-...+.|  +++++.|
T Consensus       104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l  181 (306)
T 2p4o_A          104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL  181 (306)
T ss_dssp             TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred             CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence            333332221  222345556555554444444588999999876531 21110         111234555  7787655


Q ss_pred             E-EeeCCCcEEEeeccC-CeE---EEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902        289 S-SGGTDKSVRVWKIQE-ESQ---LVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE  363 (454)
Q Consensus       289 ~-~~~~dg~i~i~d~~~-~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  363 (454)
                      + +-...+.|..|++.. +..   ..+.....+-.....++++.+++....+.|.+++.. +...........       
T Consensus       182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~-------  253 (306)
T 2p4o_A          182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG-------  253 (306)
T ss_dssp             EEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT-------
T ss_pred             EEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc-------
Confidence            4 445567899999874 221   111111122223334456666666678899999975 433221111111       


Q ss_pred             CCcEEEEEEe---cCCCEEEEecCCC
Q psy17902        364 PNWITSVACL---HNSDLVASGSYDG  386 (454)
Q Consensus       364 ~~~i~~~~~s---~~~~~l~~~~~dg  386 (454)
                      ....++++|.   |+++.|++++..+
T Consensus       254 ~~~p~~~a~~g~~~d~~~LyVt~~~~  279 (306)
T 2p4o_A          254 VIGSTAVAFGQTEGDCTAIYVVTNGG  279 (306)
T ss_dssp             CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred             cCCceEEEEecccCCCCEEEEECCCC
Confidence            1238999998   8877666665543

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.79  E-value=4.2e-06  Score=78.05  Aligned_cols=242  Identities=7%  Similarity=0.000  Sum_probs=140.4

Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CC----cEEEE
Q psy17902        144 SITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NS----NIKLW  217 (454)
Q Consensus       144 ~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~v~vw  217 (454)
                      ....|+++| ++..|+++...+.|+.+|+.+........       .......++|++++++|+++.. ++    .+.++
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-------~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~  210 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-------GLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL  210 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-------CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-------CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence            467899998 45667666655889999988765433222       3346889999999996666554 22    34444


Q ss_pred             eCCCccE--EeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEE-EEee
Q psy17902        218 SSSLEHL--HTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVI-SSGG  292 (454)
Q Consensus       218 ~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~  292 (454)
                      +..+...  ..+.. ......++++| ++.++++-..++.|..++...+....... +.......|+|+|++++| ++-.
T Consensus       211 ~~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~  289 (430)
T 3tc9_A          211 TRESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV  289 (430)
T ss_dssp             EGGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred             eCCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence            4433221  22221 23456788999 66666665567899999998765422222 122346789999999954 4445


Q ss_pred             CCCcEEEeeccCC--eE---EEEccc----------------cCCeEEEEec---------CCCEEEEEeCCCCEEEEec
Q psy17902        293 TDKSVRVWKIQEE--SQ---LVFNGH----------------SRGIDMTRRV---------NDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       293 ~dg~i~i~d~~~~--~~---~~~~~~----------------~~~i~~~~~~---------~~~~l~~~~~dg~i~iwd~  342 (454)
                      ..+.|..++....  ..   ..+.+.                ..+...++..         .+..+++-...+.|+.++.
T Consensus       290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~  369 (430)
T 3tc9_A          290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP  369 (430)
T ss_dssp             TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred             CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence            6788999887642  11   112111                0111123332         1334444456678888883


Q ss_pred             CCCccceeeecc----cCC----CCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcC
Q psy17902        343 LKKVPTHTIPVA----HGY----DSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       343 ~~~~~~~~~~~~----~~~----~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~  394 (454)
                       .+......-..    .+.    ......-.....|+++| ++.++++-..++.|+.+++.
T Consensus       370 -~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  429 (430)
T 3tc9_A          370 -QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE  429 (430)
T ss_dssp             -TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             -CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence             44322222110    000    00011123588999999 46666666667788888764

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.76  E-value=6.3e-05  Score=67.99  Aligned_cols=244  Identities=11%  Similarity=0.034  Sum_probs=144.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~  219 (454)
                      +.+..+|.+..++ .+|+.+.. ..|+..++..........       ....+..++|++....|+.. ...+.|..+++
T Consensus        32 ~~d~~~C~~~~~~-~~ll~~~~-~~I~~i~~~g~~~~~~~~-------~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~  102 (349)
T 3v64_C           32 RPDRRSCKALGPE-PVLLFANR-IDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSDVTLDRILRANL  102 (349)
T ss_dssp             CTTSSCEEESSSC-CEEEEECB-SCEEEECTTSCCEEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             CCCCCcccccccC-ceeEeecc-cceEEEeCCCCeeEEeec-------CCCceEEEEEeccccEEEEEeccCCceEEEec
Confidence            3445567776664 45555443 468888877654433222       23357899999765555544 45788999998


Q ss_pred             CCccEEee-cccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCC-C
Q psy17902        220 SLEHLHTF-TGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTD-K  295 (454)
Q Consensus       220 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-g  295 (454)
                      .+.....+ .........+++.+.+..| ++-...+.|.+.++........+.........|+++|.+..|+.+ ... +
T Consensus       103 ~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~  182 (349)
T 3v64_C          103 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP  182 (349)
T ss_dssp             TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred             CCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence            65544333 2233456789998755555 455556789999987554333333334567899999866555444 334 6


Q ss_pred             cEEEeeccCCeEEEEcc-ccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        296 SVRVWKIQEESQLVFNG-HSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       296 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      .|..+++.......+.. .......+.+. .++.|+ +-+..+.|..+++........+...         ......+++
T Consensus       183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---------~~~P~giav  253 (349)
T 3v64_C          183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---------LPHPFAITV  253 (349)
T ss_dssp             EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---------CSSEEEEEE
T ss_pred             EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---------CCCceEEEE
Confidence            78888877644433221 12222334443 455554 4446678999998643222222111         122677888


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                       ..+.++++-...+.|..++..++.....+.
T Consensus       254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i~  283 (349)
T 3v64_C          254 -FEDSLYWTDWHTKSINSANKFTGKNQEIIR  283 (349)
T ss_dssp             -ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             -ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence             455566666677889888866665554443

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.72  E-value=5.7e-05  Score=69.32  Aligned_cols=241  Identities=11%  Similarity=0.044  Sum_probs=143.4

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCCc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSLE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~  222 (454)
                      .-+|.+..+ ..+|+.+.. ..|+.+++..........       ....+..++|.+.+..|+ +-...+.|..+++.+.
T Consensus        78 ~~~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~~~-------~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~  148 (386)
T 3v65_B           78 RRSCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS  148 (386)
T ss_dssp             SSCEEECSS-CCEEEEECB-SCEEEECTTSCCCEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             CCeECCccc-cceeEeecC-ccceeeccCCCcEEEEec-------CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence            345666555 345554443 568888887654433222       234588999997555454 4455788999999665


Q ss_pred             cEEee-cccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee-CC-CcEE
Q psy17902        223 HLHTF-TGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG-TD-KSVR  298 (454)
Q Consensus       223 ~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~  298 (454)
                      ....+ .........+++.+.+..| ++-...+.|.+.++........+.........|+++|.+..|+.+. .. +.|.
T Consensus       149 ~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~  228 (386)
T 3v65_B          149 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE  228 (386)
T ss_dssp             CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred             CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence            54443 2223355778898755555 4445567899999875443333333335678999998776555444 33 6788


Q ss_pred             EeeccCCeEEEEc-cccCCeEEEEe-cCCCEE-EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        299 VWKIQEESQLVFN-GHSRGIDMTRR-VNDQQF-ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       299 i~d~~~~~~~~~~-~~~~~i~~~~~-~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      .+++.......+. ........+.+ +.++.| ++-+..+.|..+++........+...         ......|++ ..
T Consensus       229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---------~~~P~giav-~~  298 (386)
T 3v65_B          229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---------LPHPFAITV-FE  298 (386)
T ss_dssp             EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---------CSSEEEEEE-ET
T ss_pred             EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---------CCCceEEEE-EC
Confidence            8887764443322 22222233444 345544 45556778999998643222222111         122677888 45


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      +.++++-...+.|..++..++.....+.
T Consensus       299 ~~ly~td~~~~~V~~~~~~~G~~~~~i~  326 (386)
T 3v65_B          299 DSLYWTDWHTKSINSANKFTGKNQEIIR  326 (386)
T ss_dssp             TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             CEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence            5566666678889999876776665554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.71  E-value=2.4e-06  Score=85.91  Aligned_cols=191  Identities=5%  Similarity=-0.011  Sum_probs=111.5

Q ss_pred             CeEEEEEc-CCCCEEEEEeC-CC----eEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----
Q psy17902        144 SITCIAVT-SDSKHVYSACK-DG----IIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----  211 (454)
Q Consensus       144 ~V~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----  211 (454)
                      .+...+|| |||++||.+.. +|    .|+++|+.++ ..+.. .+       ......++|+|||+.|+....+     
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~-------~~~~~~~~WspDg~~l~y~~~d~~~~~  246 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV-------SGTNGEIVWGPDHTSLFYVTKDETLRE  246 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE-------EEECSCCEECSSTTEEEEEEECTTCCE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc-------cCceeeEEEecCCCEEEEEEECCCCCC
Confidence            67889999 99998886543 23    5999999987 53211 00       1123468899999888777654     


Q ss_pred             CcEEEEeCCCcc---EEeec-ccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCc--ee-EEEe-eccCCceeEEE
Q psy17902        212 SNIKLWSSSLEH---LHTFT-GHKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDR--AY-VETL-FGHQSAITSLD  280 (454)
Q Consensus       212 g~v~vw~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~--~~-~~~~-~~~~~~v~~~~  280 (454)
                      ..|.++++.+..   ...+. ........+.|+|||++|+..+.   ...|+++|+.++  .. +..+ ........++.
T Consensus       247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~  326 (751)
T 2xe4_A          247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ  326 (751)
T ss_dssp             EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred             CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence            257778884321   22322 23345678899999998887653   346888999875  22 1233 33444556666


Q ss_pred             eecCCCEEEEeeCC----CcEEEeeccCC-eEEE-EccccC--CeEEEEecCCCEEEEEeCCCCE--EEEec
Q psy17902        281 ILAKNRVISSGGTD----KSVRVWKIQEE-SQLV-FNGHSR--GIDMTRRVNDQQFITCGEDGTL--SLWSI  342 (454)
Q Consensus       281 ~~~~~~~l~~~~~d----g~i~i~d~~~~-~~~~-~~~~~~--~i~~~~~~~~~~l~~~~~dg~i--~iwd~  342 (454)
                      |+..+.+++.+..+    ..|..+++.++ .... +..+..  .+..+.+..+..+++...++..  .++++
T Consensus       327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred             eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence            55444444554443    35666776642 2112 222332  2333344444455566677754  45554

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.71  E-value=1e-05  Score=75.46  Aligned_cols=245  Identities=8%  Similarity=0.044  Sum_probs=142.3

Q ss_pred             CceEEEEEeC-CCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEeCCCce
Q psy17902        191 PPILALAVAN-NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND-R----SIKVWNIEDRA  264 (454)
Q Consensus       191 ~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~  264 (454)
                      .....|+++| ++..|+++...+.|+.+|+.+..+..+.........++|++++++|+++... +    .+.+++.. +.
T Consensus       137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~  215 (430)
T 3tc9_A          137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG  215 (430)
T ss_dssp             SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred             CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence            3567899998 4555666655588999999776666665556678899999999967666542 2    34444432 32


Q ss_pred             eE--EEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeEEEEc---cccCCeEEEEecCCCEE-EEEeCCCCE
Q psy17902        265 YV--ETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFN---GHSRGIDMTRRVNDQQF-ITCGEDGTL  337 (454)
Q Consensus       265 ~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~i~~~~~~~~~~l-~~~~~dg~i  337 (454)
                      ..  ..+. .......++++| ++.++++-..++.|..|+........+.   ....+....+.+++++| ++-...+.|
T Consensus       216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I  294 (430)
T 3tc9_A          216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI  294 (430)
T ss_dssp             SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred             eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence            21  2222 123457788999 6776666667789999999876653221   11224445555667744 455577889


Q ss_pred             EEEecCCC--cc--ceeeecccCCCCC------CCCCCcEE-EEEEe--------cCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        338 SLWSILKK--VP--THTIPVAHGYDSS------SSEPNWIT-SVACL--------HNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       338 ~iwd~~~~--~~--~~~~~~~~~~~~~------~~~~~~i~-~~~~s--------~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                      ..++....  ..  ...+....+....      ...-.... .++..        ++|.+.++-...+.|+.++ ..+..
T Consensus       295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v  373 (430)
T 3tc9_A          295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV  373 (430)
T ss_dssp             EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred             EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence            99876532  11  1122111000000      00011133 45553        3466666666678899888 34543


Q ss_pred             eeEecc----CCC--c---------eeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        399 LEFLQD----IPL--S---------GVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       399 ~~~~~~----~~~--~---------~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      ......    ...  .         .....|+++|++..|+++-..+++|+.++.
T Consensus       374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  428 (430)
T 3tc9_A          374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY  428 (430)
T ss_dssp             EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence            332221    000  1         147899999965666666466777777654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.67  E-value=0.00012  Score=66.25  Aligned_cols=233  Identities=7%  Similarity=-0.034  Sum_probs=136.2

Q ss_pred             EEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeecc
Q psy17902        194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGH  272 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~  272 (454)
                      .|.+..++. +|+.+. ...|+..++.+.....+......+..++|++....|+.+. ..+.|..+++........+...
T Consensus        37 ~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~  114 (349)
T 3v64_C           37 SCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG  114 (349)
T ss_dssp             CEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred             cccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC
Confidence            344444533 444443 3468888886655555444445688999998666666554 5788999998866543333323


Q ss_pred             CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEE-Eccc-cCCeEEEEecCCCEEE-EEeCC-CCEEEEecCCCcc
Q psy17902        273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLV-FNGH-SRGIDMTRRVNDQQFI-TCGED-GTLSLWSILKKVP  347 (454)
Q Consensus       273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-~~~i~~~~~~~~~~l~-~~~~d-g~i~iwd~~~~~~  347 (454)
                      ......+++.+.+ +++++-...+.|.+.++....... .... ..+...+..+.++.|+ +-... +.|..+++.....
T Consensus       115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~  194 (349)
T 3v64_C          115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR  194 (349)
T ss_dssp             CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence            3445789998755 455555567789999987654332 2222 2233333344455444 44444 7788888754322


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                       ..+.. .       .-.+...|+++|++..|+.+ +..+.|..+++........+..  .......|++.  +..|+.+
T Consensus       195 -~~~~~-~-------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~--~~~~P~giav~--~~~ly~t  261 (349)
T 3v64_C          195 -RIIAD-T-------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITVF--EDSLYWT  261 (349)
T ss_dssp             -EESCC-S-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEE--TTEEEEE
T ss_pred             -EEEEE-C-------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC--CCCCceEEEEE--CCEEEEe
Confidence             22110 1       12347899999866655444 4567899999875433322322  23446677773  3456666


Q ss_pred             ecCCCceeeeeeeCC
Q psy17902        427 IGTEHRFGRWKTIKG  441 (454)
Q Consensus       427 ~~~d~~i~~W~~~~~  441 (454)
                      -...+.|...+...+
T Consensus       262 d~~~~~V~~~~~~~G  276 (349)
T 3v64_C          262 DWHTKSINSANKFTG  276 (349)
T ss_dssp             ETTTTEEEEEETTTC
T ss_pred             cCCCCeEEEEEccCC
Confidence            466777877764444

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.65  E-value=4.1e-05  Score=65.10  Aligned_cols=200  Identities=11%  Similarity=0.144  Sum_probs=127.1

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS  212 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  212 (454)
                      +.+.|  -.+.+..++|+|+++.|+ +...++.|...|.. +.....+++     ......-.|++.+++.++++.-.++
T Consensus        20 ~~l~g--~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-----~g~~D~EGIa~~~~g~~~vs~E~~~   91 (255)
T 3qqz_A           20 KEIAG--ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-----DFVKDLETIEYIGDNQFVISDERDY   91 (255)
T ss_dssp             EECTT--CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-----SSCSSEEEEEECSTTEEEEEETTTT
T ss_pred             eECCC--cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-----CCCCChHHeEEeCCCEEEEEECCCC
Confidence            45666  556799999999876555 46778899999998 777666654     2234677889999998877766778


Q ss_pred             cEEEEeC--CCc--cEEeec------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CceeEEEee-------cc
Q psy17902        213 NIKLWSS--SLE--HLHTFT------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DRAYVETLF-------GH  272 (454)
Q Consensus       213 ~v~vw~~--~~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~-------~~  272 (454)
                      .+.++++  .+.  .+....      ..+.....|+|+|.++.|+++.......+|.+.   ....+..+.       .+
T Consensus        92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~  171 (255)
T 3qqz_A           92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT  171 (255)
T ss_dssp             EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred             cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence            8999987  222  112221      234557899999999888887766555555543   111112111       13


Q ss_pred             CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEEEcccc---------CCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902        273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGHS---------RGIDMTRRVNDQQFITCGEDGTLSLWS  341 (454)
Q Consensus       273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------~~i~~~~~~~~~~l~~~~~dg~i~iwd  341 (454)
                      ...+.+++++|.. .+++.......|.++|........+.-..         ..-.-+.+.+.+.|+..+.-+.+++|.
T Consensus       172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~  250 (255)
T 3qqz_A          172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT  250 (255)
T ss_dssp             SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred             cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence            3457899999875 45566667788899997755222221111         122445555444466667766666664

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.63  E-value=3.6e-05  Score=71.69  Aligned_cols=244  Identities=7%  Similarity=-0.031  Sum_probs=139.3

Q ss_pred             CceEEEEEeCC--CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCc
Q psy17902        191 PPILALAVANN--NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDR  263 (454)
Q Consensus       191 ~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~  263 (454)
                      .....++|+|+  ...|+.+...+.|+.++.....+..+........+++|+++++ |+.+...+     .+...+...+
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~  217 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG  217 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence            45678999984  3445555444899999996566666655556789999999999 55554322     2333333221


Q ss_pred             ee-EEEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeE-EEE-c-cc-cCCeEEEEecCCCEE-EEEeCCCC
Q psy17902        264 AY-VETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQ-LVF-N-GH-SRGIDMTRRVNDQQF-ITCGEDGT  336 (454)
Q Consensus       264 ~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~-~~~-~-~~-~~~i~~~~~~~~~~l-~~~~~dg~  336 (454)
                      .. ...+. .......++++| ++.++++-..++.|+.++..++.. ..+ . +. .......+.++++.| ++-...+.
T Consensus       218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~  296 (433)
T 4hw6_A          218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC  296 (433)
T ss_dssp             TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred             eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence            11 01111 223456788999 666666655678899999986665 221 1 11 112234445566644 45556788


Q ss_pred             EEEEecCC--Cccc--eeeecccCCCCC------CCCCCcEEEEEE---------ecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902        337 LSLWSILK--KVPT--HTIPVAHGYDSS------SSEPNWITSVAC---------LHNSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       337 i~iwd~~~--~~~~--~~~~~~~~~~~~------~~~~~~i~~~~~---------s~~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                      |+.+++..  +...  ..+....+....      ...-.....+++         .++|.+.++-...+.|+.++. ++.
T Consensus       297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~  375 (433)
T 4hw6_A          297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR  375 (433)
T ss_dssp             EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred             EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence            99987652  2211  111111010000      011233678999         677777777777889999985 453


Q ss_pred             eeeEeccCCC----------------ceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        398 TLEFLQDIPL----------------SGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       398 ~~~~~~~~~~----------------~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .. .+.+...                -.....|+++|....|+++-..+++|+.++.
T Consensus       376 v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~  431 (433)
T 4hw6_A          376 VT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP  431 (433)
T ss_dssp             EE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred             EE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence            33 3322110                1236789999544455555456777777654

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.62  E-value=2.2e-06  Score=84.84  Aligned_cols=233  Identities=10%  Similarity=0.124  Sum_probs=129.9

Q ss_pred             EEEEeC-CCcEEEEecCCC-----------cEEEEeCCCc---cEEeec-ccCCCeEEEEEcCCCCEEEEEeC-CCcEEE
Q psy17902        195 ALAVAN-NNELVASGDNNS-----------NIKLWSSSLE---HLHTFT-GHKAPITGLAISFECDTLYSSSN-DRSIKV  257 (454)
Q Consensus       195 ~~~~~~-~~~~l~~~~~dg-----------~v~vw~~~~~---~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i  257 (454)
                      .+++.+ ++++++.|+.+.           .+.+||....   .+..+. .+.....++++..++.++++|+. +..+.+
T Consensus       190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~  269 (656)
T 1k3i_A          190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  269 (656)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence            566777 888888887542           5788998332   222222 23333445778889999999984 458999


Q ss_pred             EeCCCceeEEEeeccCC-ceeEEEeecCCCEEEEee-CC-----CcEEEeeccCCeEEEEccc-----c-CCeEEEEecC
Q psy17902        258 WNIEDRAYVETLFGHQS-AITSLDILAKNRVISSGG-TD-----KSVRVWKIQEESQLVFNGH-----S-RGIDMTRRVN  324 (454)
Q Consensus       258 wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~-----~-~~i~~~~~~~  324 (454)
                      ||..+.+....-..+.. .-.+++..+++++++.|+ .+     ..+.+||..+.........     . .....+...+
T Consensus       270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~  349 (656)
T 1k3i_A          270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD  349 (656)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred             ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence            99987654332111111 123455667899999888 34     5689999988765543210     0 0000111123


Q ss_pred             CCEEEEEeCCC---------CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCC--------
Q psy17902        325 DQQFITCGEDG---------TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDG--------  386 (454)
Q Consensus       325 ~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg--------  386 (454)
                      +..++.++.+|         .+..||..+..-...................-.++.|.. ++++++.|+.++        
T Consensus       350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~  429 (656)
T 1k3i_A          350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT  429 (656)
T ss_dssp             CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred             CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence            44455555444         467788766543322211110000000011134455543 677888887543        


Q ss_pred             ---cEEEEEcCCCceeeEe-ccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        387 ---CVKLWKITPKRTLEFL-QDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       387 ---~v~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                         .|.+||..+....... ..++....-.+++..|+|+.+++++
T Consensus       430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG  474 (656)
T 1k3i_A          430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG  474 (656)
T ss_dssp             CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred             cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence               6788887766443332 1222333334567788999998883

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.62  E-value=2.2e-05  Score=73.20  Aligned_cols=242  Identities=9%  Similarity=0.017  Sum_probs=137.8

Q ss_pred             CCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---C-cEEE
Q psy17902        143 ASITCIAVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---S-NIKL  216 (454)
Q Consensus       143 ~~V~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~v~v  216 (454)
                      .....|+|+|+  ...|+.+...+.|+.++..++.......       .......++++++|+++++....   . .+..
T Consensus       139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-------~~~~P~giavd~dG~lyVad~~~~~~~~gv~~  211 (433)
T 4hw6_A          139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-------NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYL  211 (433)
T ss_dssp             SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-------CCSCEEEEEECTTCCEEEEECCSCTTSEEEEE
T ss_pred             CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-------CCCCccEEEECCCCCEEEEcCCCCcccceEEE
Confidence            34678999984  4456655544899999987766544322       33468899999999944444321   1 2333


Q ss_pred             EeCCCccE--EeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEE-E
Q psy17902        217 WSSSLEHL--HTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVIS-S  290 (454)
Q Consensus       217 w~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~-~  290 (454)
                      .+..+...  ..+. .-.....++++| ++.++++-..++.|+.++..++.....+.  +....-..|+|+|++++|+ +
T Consensus       212 ~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva  290 (433)
T 4hw6_A          212 FTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII  290 (433)
T ss_dssp             ECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred             EECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence            33321111  1121 233456788999 56655555567889999998776522222  1122234699999998554 4


Q ss_pred             eeCCCcEEEeeccC--CeE---EEEccc---------------cCCeEEEEe---------cC-CCEEEEEeCCCCEEEE
Q psy17902        291 GGTDKSVRVWKIQE--ESQ---LVFNGH---------------SRGIDMTRR---------VN-DQQFITCGEDGTLSLW  340 (454)
Q Consensus       291 ~~~dg~i~i~d~~~--~~~---~~~~~~---------------~~~i~~~~~---------~~-~~~l~~~~~dg~i~iw  340 (454)
                      -...+.|+.+++..  +..   ..+.+.               -..-..+.+         .. +.++++-...+.|+.+
T Consensus       291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~  370 (433)
T 4hw6_A          291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL  370 (433)
T ss_dssp             ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred             eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence            45567899877652  211   122221               011223444         33 3445555567889888


Q ss_pred             ecCCCccceeeecccC-----C----CCCCCCCCcEEEEEEe-cCCCEEEEecCCCcEEEEEcC
Q psy17902        341 SILKKVPTHTIPVAHG-----Y----DSSSSEPNWITSVACL-HNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~-----~----~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      +. .+. +.++.....     .    ......-.....|+++ ++|.++++-..++.|+.++++
T Consensus       371 ~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e  432 (433)
T 4hw6_A          371 TP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE  432 (433)
T ss_dssp             CT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred             CC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence            85 443 222221100     0    0001122347889999 677777766677888888764

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=98.62  E-value=4.7e-06  Score=83.75  Aligned_cols=193  Identities=11%  Similarity=0.049  Sum_probs=108.4

Q ss_pred             ceEEEEEe-CCCcEEEEecC-CC----cEEEEeCCCc-cEEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEe
Q psy17902        192 PILALAVA-NNNELVASGDN-NS----NIKLWSSSLE-HLHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWN  259 (454)
Q Consensus       192 ~v~~~~~~-~~~~~l~~~~~-dg----~v~vw~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd  259 (454)
                      .+...+|| |||++||.+.. +|    .|+++|+.+. .... ..-......++|+||++.|+....+     ..|++++
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~  253 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV  253 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence            67889999 99998886543 22    4999999443 3111 0001123468899999888877654     3688889


Q ss_pred             CCCcee--EEEee-ccCCceeEEEeecCCCEEEEeeC---CCcEEEeeccCC--eE--EEEcc-ccCCeEEEEecCCCEE
Q psy17902        260 IEDRAY--VETLF-GHQSAITSLDILAKNRVISSGGT---DKSVRVWKIQEE--SQ--LVFNG-HSRGIDMTRRVNDQQF  328 (454)
Q Consensus       260 ~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~-~~~~i~~~~~~~~~~l  328 (454)
                      +.++..  ...+. .......++.|+|+|++|+..+.   ...|+++|+.++  ..  ..+.. .........+..++.|
T Consensus       254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l  333 (751)
T 2xe4_A          254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL  333 (751)
T ss_dssp             TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred             CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence            887642  22222 22344668899999998876553   346888888765  22  22222 2233333333456666


Q ss_pred             EEEeCC---C--CEEEEecCCCcccee-eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE--EEEEc
Q psy17902        329 ITCGED---G--TLSLWSILKKVPTHT-IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV--KLWKI  393 (454)
Q Consensus       329 ~~~~~d---g--~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v--~iwd~  393 (454)
                      +..+..   +  .|..+++.+...... +.. +.      ....+..+.+. .+.++++...+|..  .++++
T Consensus       334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~~------~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-HS------EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EEEECTTTCTTCEEEEEETTSTTCCCCEEEC-CC------SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred             EEEeCCCCCCCcEEEEEcCCCcccceeeEEC-CC------CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence            555432   2  566666654211111 111 11      01124555554 23355666677764  45554

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.61  E-value=0.00027  Score=62.91  Aligned_cols=227  Identities=8%  Similarity=-0.003  Sum_probs=129.2

Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC----ceeEEEeeccCCceeE
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED----RAYVETLFGHQSAITS  278 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~----~~~~~~~~~~~~~v~~  278 (454)
                      +|+.+.. ..|+..++.+.....+......+.+++|++.+..|+.+. ..+.|..+++..    ......+...-.....
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g   81 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             EEEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence            3444443 568888985543333333455678999998766555554 568999999876    2222222222245678


Q ss_pred             EEeecCC-CEEEEeeCCCcEEEeeccCCeEEEE-ccc-cCCeEEEEecCCCEEEEEe-CC-CCEEEEecCCCccceeeec
Q psy17902        279 LDILAKN-RVISSGGTDKSVRVWKIQEESQLVF-NGH-SRGIDMTRRVNDQQFITCG-ED-GTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       279 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~~~-~~~i~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~  353 (454)
                      +++.+.+ ++.++-...+.|.++++.......+ ... ..+-.....+.++.++.+. .. +.|..+++... ....+..
T Consensus        82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~  160 (316)
T 1ijq_A           82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVT  160 (316)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEEC
T ss_pred             EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEE
Confidence            9998655 4555556678999999876544322 212 2233333344455555444 33 67888887432 2222211


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                      .        .-.+...++++|++..|+.+ +..+.|..+++........+...........|++.  +..|+.+-...++
T Consensus       161 ~--------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~  230 (316)
T 1ijq_A          161 E--------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA  230 (316)
T ss_dssp             S--------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             C--------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCe
Confidence            1        12348899999876655544 45678999998743222222211122345677774  3466656466788


Q ss_pred             eeeeeeeCCC
Q psy17902        433 FGRWKTIKGV  442 (454)
Q Consensus       433 i~~W~~~~~~  442 (454)
                      |..++...+.
T Consensus       231 V~~~~~~~g~  240 (316)
T 1ijq_A          231 IFSANRLTGS  240 (316)
T ss_dssp             EEEEETTTCC
T ss_pred             EEEEeCCCCc
Confidence            8888765543

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.58  E-value=0.00032  Score=62.35  Aligned_cols=232  Identities=9%  Similarity=-0.001  Sum_probs=136.7

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCC----ccEEe-ecc
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSL----EHLHT-FTG  229 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~----~~~~~-~~~  229 (454)
                      +|+.+.. ..|+..++.+......+.       ....+..++|++.+..|+ +-...+.|..+++.+    ..... +..
T Consensus         3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~   74 (316)
T 1ijq_A            3 YLFFTNR-HEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR   74 (316)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred             EEEEECC-CeEEEEECCCcceEehhc-------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC
Confidence            4555443 568888988765443332       234678999998655444 445568999999854    22222 222


Q ss_pred             cCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC--CcEEEeeccCCe
Q psy17902        230 HKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD--KSVRVWKIQEES  306 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~  306 (454)
                      .-.....+++.+.+..| ++-...+.|.++++........+.........++++|.+..|+.+...  +.|..+++....
T Consensus        75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~  154 (316)
T 1ijq_A           75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (316)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence            23456789998755555 454567899999987544333333334567899999876655554432  678888876544


Q ss_pred             EEEE-ccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        307 QLVF-NGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       307 ~~~~-~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      ...+ .........+.+. .++.|+ +-+..+.|..+|+... ....+.....      .......+++. .+.++++-.
T Consensus       155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~------~~~~P~giav~-~~~ly~~d~  226 (316)
T 1ijq_A          155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEK------RLAHPFSLAVF-EDKVFWTDI  226 (316)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTT------TTSSEEEEEEE-TTEEEEEET
T ss_pred             eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCC------ccCCcEEEEEE-CCEEEEEEC
Confidence            4332 2222223344443 455555 4446678999998643 2333321110      11226777875 455666666


Q ss_pred             CCCcEEEEEcCCCceeeEec
Q psy17902        384 YDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       384 ~dg~v~iwd~~~~~~~~~~~  403 (454)
                      ..+.|..++..+++.+..+.
T Consensus       227 ~~~~V~~~~~~~g~~~~~i~  246 (316)
T 1ijq_A          227 INEAIFSANRLTGSDVNLLA  246 (316)
T ss_dssp             TTTEEEEEETTTCCCCEEEE
T ss_pred             CCCeEEEEeCCCCcceEEEe
Confidence            77889999987776555443

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.58  E-value=0.00013  Score=68.14  Aligned_cols=251  Identities=9%  Similarity=-0.013  Sum_probs=144.8

Q ss_pred             CeEEEEEcC-CCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE-------eCCCcEEEEecCCC--
Q psy17902        144 SITCIAVTS-DSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV-------ANNNELVASGDNNS--  212 (454)
Q Consensus       144 ~V~~~~~s~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~dg--  212 (454)
                      ....|+|+| +...|+.+ ...+.|++.|+.++.........   .........|+|       ++++.+|+++...+  
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~---~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~  216 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN---TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK  216 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT---TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC---ccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence            367899998 34445544 44467888998876655433321   113346899999       99998666665543  


Q ss_pred             -----cEEEEeCCC--ccE-----EeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCC-------Ccee-------
Q psy17902        213 -----NIKLWSSSL--EHL-----HTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIE-------DRAY-------  265 (454)
Q Consensus       213 -----~v~vw~~~~--~~~-----~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~-------~~~~-------  265 (454)
                           .|.+++...  ...     ..+... .....++++|++ .++++-..++.|..+|+.       ++..       
T Consensus       217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~  295 (496)
T 3kya_A          217 GDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN  295 (496)
T ss_dssp             GGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred             cccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence                 266665422  221     222221 234577889954 445555567889999987       4543       


Q ss_pred             ----EEEe-e-ccCCceeEEEeecCCCEE-EEeeCCCcEEEeeccC--CeE---EEEccc---c-------------CCe
Q psy17902        266 ----VETL-F-GHQSAITSLDILAKNRVI-SSGGTDKSVRVWKIQE--ESQ---LVFNGH---S-------------RGI  317 (454)
Q Consensus       266 ----~~~~-~-~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~--~~~---~~~~~~---~-------------~~i  317 (454)
                          ...+ . +.....+.|+|+|++++| ++-+..+.|+.++...  +..   ..+.+.   .             .+.
T Consensus       296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~  375 (496)
T 3kya_A          296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC  375 (496)
T ss_dssp             CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred             cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence                1121 1 223445789999999954 4445667888866543  221   122221   0             111


Q ss_pred             EEEEec--------CCCEEEEEeCCCCEEEEecCCCccceeeeccc-----------CC----CCCCCCCCcEEEEEEec
Q psy17902        318 DMTRRV--------NDQQFITCGEDGTLSLWSILKKVPTHTIPVAH-----------GY----DSSSSEPNWITSVACLH  374 (454)
Q Consensus       318 ~~~~~~--------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~----~~~~~~~~~i~~~~~s~  374 (454)
                      ..++..        .+.++++-..+..|+.++ .++ .+.++....           +.    ......-.....|++++
T Consensus       376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~  453 (496)
T 3kya_A          376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD  453 (496)
T ss_dssp             EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred             EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence            133332        345555666788999998 344 333432211           10    01112234578999999


Q ss_pred             C-CCEEEEecCCCcEEEEEcCCCceee
Q psy17902        375 N-SDLVASGSYDGCVKLWKITPKRTLE  400 (454)
Q Consensus       375 ~-~~~l~~~~~dg~v~iwd~~~~~~~~  400 (454)
                      + |.++++=+.+..|+.+++.......
T Consensus       454 ~~g~lyVaD~~N~rIrki~~~~~~~~~  480 (496)
T 3kya_A          454 VKEMFYVHDQVGHTIRTISMEQEENVA  480 (496)
T ss_dssp             TTTEEEEEETTTTEEEEEEECCCC---
T ss_pred             CCCEEEEEeCCCCEEEEEECCCCcccc
Confidence            6 7777777778899999987654443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.58  E-value=0.00069  Score=66.08  Aligned_cols=160  Identities=7%  Similarity=-0.031  Sum_probs=100.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCce-ecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEe
Q psy17902        142 RASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSK-VCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWS  218 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~  218 (454)
                      -..+..|+|++.+..|+.+. ..+.|..++++.... ...+.      ........+++.+.+. +.++-...+.|.+.+
T Consensus        39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~  112 (619)
T 3s94_A           39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSN  112 (619)
T ss_dssp             CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence            34578999999766666554 457888888876421 11111      1224688999998554 455555678999999


Q ss_pred             CCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCC
Q psy17902        219 SSLEHLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTD  294 (454)
Q Consensus       219 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d  294 (454)
                      +++.....+. ..-.....|++.|.+..|+.+..  .+.|...++............-...+.|++++++..|+.+ ...
T Consensus       113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~  192 (619)
T 3s94_A          113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKL  192 (619)
T ss_dssp             TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred             CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCC
Confidence            9776654443 34456778999997666666653  4577777776433322222334457899999876655544 455


Q ss_pred             CcEEEeeccCCeE
Q psy17902        295 KSVRVWKIQEESQ  307 (454)
Q Consensus       295 g~i~i~d~~~~~~  307 (454)
                      +.|..+++.....
T Consensus       193 ~~I~~~~~dG~~~  205 (619)
T 3s94_A          193 NFIHKSNLDGTNR  205 (619)
T ss_dssp             CCEEEESSSCCEE
T ss_pred             CeEEEecCCCCcc
Confidence            6788888865443

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.58  E-value=0.00044  Score=63.73  Aligned_cols=233  Identities=8%  Similarity=-0.036  Sum_probs=140.4

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeCCC-----ccEEeec
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSSSL-----EHLHTFT  228 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~~~-----~~~~~~~  228 (454)
                      .+|+.+. ...|+..++..........       ....+..|+|++....|+.. ...+.|..+++.+     .....+.
T Consensus        84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-------~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~  155 (400)
T 3p5b_L           84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS  155 (400)
T ss_dssp             CEEEEEE-TTEEEEECTTSCSCEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred             ceeEEec-cceeEEEccCCcceeEecc-------ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence            3555554 4688888888665433322       34578899999865555554 4568898898854     2233333


Q ss_pred             ccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCC
Q psy17902        229 GHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEE  305 (454)
Q Consensus       229 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~  305 (454)
                      ........+++.+.+. ++++-...+.|.+.++........+.........|++.|.+.+|+.+..  .+.|...++...
T Consensus       156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~  235 (400)
T 3p5b_L          156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV  235 (400)
T ss_dssp             SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred             CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence            3445678899988444 4445556788999998865544444434455789999997666655542  468888888765


Q ss_pred             eEEEE-ccccCCeEEEEec-CCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902        306 SQLVF-NGHSRGIDMTRRV-NDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG  382 (454)
Q Consensus       306 ~~~~~-~~~~~~i~~~~~~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~  382 (454)
                      ....+ .........+.+. .++.|+.+ +..+.|..+|+..... ..+.....      .......+++. .+.++++-
T Consensus       236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~------~l~~P~gl~v~-~~~lywtd  307 (400)
T 3p5b_L          236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEK------RLAHPFSLAVF-EDKVFWTD  307 (400)
T ss_dssp             SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSS------TTSSEEEEEEE-TTEEEEEE
T ss_pred             ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCC------CCCCCEEEEEe-CCEEEEec
Confidence            44332 2222223334443 45555544 4667899999864333 22221111      11225677773 44566666


Q ss_pred             cCCCcEEEEEcCCCceeeEec
Q psy17902        383 SYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       383 ~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      ...+.|..++..++..+..+.
T Consensus       308 ~~~~~V~~~~~~~G~~~~~i~  328 (400)
T 3p5b_L          308 IINEAIFSANRLTGSDVNLLA  328 (400)
T ss_dssp             SSSCSEEEEESSSCCCCEEEE
T ss_pred             CCCCeEEEEEcCCCCceEEEe
Confidence            677889999977776655554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.57  E-value=0.0001  Score=67.57  Aligned_cols=233  Identities=6%  Similarity=-0.046  Sum_probs=135.5

Q ss_pred             EEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeecc
Q psy17902        194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGH  272 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~  272 (454)
                      .|.+..+. .+|+.+. ...|+.+++.+..+..+......+..++|++.+..|+.+ ...+.|..+++........+...
T Consensus        80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~  157 (386)
T 3v65_B           80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG  157 (386)
T ss_dssp             CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred             eECCcccc-ceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence            34444443 3444443 357888888655544444445568899999866655554 45778999998866543333323


Q ss_pred             CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccc-cCCeEEEEecCCCEEEEE-eCC-CCEEEEecCCCcc
Q psy17902        273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGH-SRGIDMTRRVNDQQFITC-GED-GTLSLWSILKKVP  347 (454)
Q Consensus       273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~i~~~~~~~~~~l~~~-~~d-g~i~iwd~~~~~~  347 (454)
                      ......+++.+.+ +++++-...+.|.+.++...... ..... ..+...+..+.++.|+.. ... +.|..+++.....
T Consensus       158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~  237 (386)
T 3v65_B          158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR  237 (386)
T ss_dssp             CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred             CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence            3345778888755 44555556778999988765433 22222 223333344445554443 344 6788888754322


Q ss_pred             ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE-ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS-GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ......         ...+...|+++|++..|+. -+..+.|..+++........+..  .......|++.  +..|+.+
T Consensus       238 ~~~~~~---------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~P~giav~--~~~ly~t  304 (386)
T 3v65_B          238 RIIADT---------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITVF--EDSLYWT  304 (386)
T ss_dssp             EEEECS---------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS--SCSSEEEEEEE--TTEEEEE
T ss_pred             EEEEEC---------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC--CCCCceEEEEE--CCEEEEe
Confidence            222111         1223789999986665544 45567899999865433333322  23346678873  3455555


Q ss_pred             ecCCCceeeeeeeCC
Q psy17902        427 IGTEHRFGRWKTIKG  441 (454)
Q Consensus       427 ~~~d~~i~~W~~~~~  441 (454)
                      -...+.|..++...+
T Consensus       305 d~~~~~V~~~~~~~G  319 (386)
T 3v65_B          305 DWHTKSINSANKFTG  319 (386)
T ss_dssp             ETTTTEEEEEETTTC
T ss_pred             eCCCCeEEEEECCCC
Confidence            466778877775444

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=98.55  E-value=0.0001  Score=62.70  Aligned_cols=203  Identities=10%  Similarity=0.062  Sum_probs=128.0

Q ss_pred             CCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-
Q psy17902        189 SYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-  265 (454)
Q Consensus       189 ~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-  265 (454)
                      -...+..++|+|++. ++++...++.|...|.++..+..+.- -....-.|++.+++.++++.-.++.+.++++..... 
T Consensus        25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i  104 (255)
T 3qqz_A           25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV  104 (255)
T ss_dssp             CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred             cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence            334799999999765 45557778899999998777776632 235788899998887666655678899998765432 


Q ss_pred             --EEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---CeEE-EEc-------cccCCeEEEEec-C-
Q psy17902        266 --VETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---ESQL-VFN-------GHSRGIDMTRRV-N-  324 (454)
Q Consensus       266 --~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~-~~~-------~~~~~i~~~~~~-~-  324 (454)
                        +....      ........|+|+|.++.|+++.......+|.+..   ...+ ...       ........+.+. . 
T Consensus       105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t  184 (255)
T 3qqz_A          105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK  184 (255)
T ss_dssp             EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred             eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence              22221      1334568999999998777777666666666541   1111 111       011233444443 3 


Q ss_pred             CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        325 DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       325 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      +.+++.......|.++|.. ++.+..+....+...........-.|+|.++|++.++ +.-+.++.|.-
T Consensus       185 g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~  251 (255)
T 3qqz_A          185 NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP  251 (255)
T ss_dssp             TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred             CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence            3455566677888889965 5577766665433222112234789999999985555 55566666643

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.53  E-value=0.0003  Score=64.80  Aligned_cols=228  Identities=8%  Similarity=-0.024  Sum_probs=135.0

Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCc----eeEEEeeccCCceeE
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDR----AYVETLFGHQSAITS  278 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~~~~~~~~v~~  278 (454)
                      +|+.+. ...|+..++.+.....+......+..|+|++....|+.+. ..+.|+.+++...    .....+.........
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g  163 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG  163 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred             eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence            444444 3678888886555544555567788999998766666554 5678999998752    222233323456788


Q ss_pred             EEeecC-CCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEecCCCEEEEEe-C-CCCEEEEecCCCccceeeec
Q psy17902        279 LDILAK-NRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRVNDQQFITCG-E-DGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       279 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |++.+. +++.++-...+.|.+.++.......+.  ....+...+..+.++.|+... . .+.|...++........+..
T Consensus       164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~  243 (400)
T 3p5b_L          164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  243 (400)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred             EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence            999874 455555566788999998876544322  222233333344455555443 2 47888888754332222211


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                               .-.+...|++++++..|+.+ +..+.|..+++........+..........+|++  ++..|+.+-...+.
T Consensus       244 ---------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~  312 (400)
T 3p5b_L          244 ---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEA  312 (400)
T ss_dssp             ---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCS
T ss_pred             ---------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCe
Confidence                     12348899999877766555 4567899999875433333322112233456666  34466655466778


Q ss_pred             eeeeeeeCCCe
Q psy17902        433 FGRWKTIKGVK  443 (454)
Q Consensus       433 i~~W~~~~~~~  443 (454)
                      |..++...+..
T Consensus       313 V~~~~~~~G~~  323 (400)
T 3p5b_L          313 IFSANRLTGSD  323 (400)
T ss_dssp             EEEEESSSCCC
T ss_pred             EEEEEcCCCCc
Confidence            88887655543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.52  E-value=0.00053  Score=61.81  Aligned_cols=258  Identities=10%  Similarity=0.113  Sum_probs=158.2

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC-ccEEeecccCCCeEEEEEcCC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL-EHLHTFTGHKAPITGLAISFE  242 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~  242 (454)
                      ..|.|.|+.++......+.         ..-+.-.+|..+.||.-. ...+.|+|+.. ..+..+.- ...|.-=.|-.+
T Consensus        48 ~~vvIiDl~~~~~~~rrpi---------~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~  116 (494)
T 1bpo_A           48 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL  116 (494)
T ss_dssp             CEEEEEETTSTTSCEEEEC---------CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEET
T ss_pred             CeEEEEECCCCCcceeccc---------ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCC
Confidence            4888999988665433222         223455678877777665 67999999944 44555543 345554556533


Q ss_pred             CCEEEEEeCCCcEEEEeCCCc-eeEEEeecc----CCceeEEEeecCCCEEEEee-------CCCcEEEeeccCCeEEEE
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGH----QSAITSLDILAKNRVISSGG-------TDKSVRVWKIQEESQLVF  310 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~  310 (454)
                       +.|+..+ +..|+-|++... .++..+..|    ...|..-..+++.++++..+       -.|.+.+|+...+....+
T Consensus       117 -~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i  194 (494)
T 1bpo_A          117 -NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI  194 (494)
T ss_dssp             -TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE
T ss_pred             -CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh
Confidence             3555554 467999999743 445555443    34566777788888876543       247889999998888888


Q ss_pred             ccccCCeEEEEecCC----CEEEEEeC---CCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        311 NGHSRGIDMTRRVND----QQFITCGE---DGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       311 ~~~~~~i~~~~~~~~----~~l~~~~~---dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      .+|......+.....    ..|..+..   .+.++|.++...   .+........-.-..........++..++.-.+++
T Consensus       195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy  274 (494)
T 1bpo_A          195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF  274 (494)
T ss_dssp             CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred             eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence            888776655544422    23333333   378999988543   11111110000111112345577899999888999


Q ss_pred             EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .-+.-|.|++||+.++.++..-+-  ...+|...+-.....-+++- ...|.|..-.
T Consensus       275 viTK~G~i~lyDleTgt~i~~nrI--s~~~iF~t~~~~~~~Gi~~V-nr~GqVl~v~  328 (494)
T 1bpo_A          275 LITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGV-NRKGQVLSVC  328 (494)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTTTEEEEE-ETTCEEEEEE
T ss_pred             EEecCceEEEEecccceeeeeecc--cCCceEEecccCCCCcEEEE-ccCceEEEEE
Confidence            999999999999999988876654  33445444444443334333 3555554433

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.48  E-value=0.00015  Score=65.67  Aligned_cols=235  Identities=11%  Similarity=0.036  Sum_probs=121.2

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE--Eee---cccCCCeEEEEEcCC---CCEEEEEeC-C-----CcEEE
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHL--HTF---TGHKAPITGLAISFE---CDTLYSSSN-D-----RSIKV  257 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i~i  257 (454)
                      ....|+|.|+|+++++ ...|.|.+++ .+...  ..+   .........|+|+|+   +..|+++.. .     +.|..
T Consensus        32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r  109 (352)
T 2ism_A           32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR  109 (352)
T ss_dssp             CEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence            5678999999985555 5569999998 44321  111   122456889999998   555555543 2     67888


Q ss_pred             EeCCCce-----eE-EEee---ccCCceeEEEeecCCCEEEEeeCC-------------CcEEEeeccC-----------
Q psy17902        258 WNIEDRA-----YV-ETLF---GHQSAITSLDILAKNRVISSGGTD-------------KSVRVWKIQE-----------  304 (454)
Q Consensus       258 wd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~-----------  304 (454)
                      |+.....     .+ ..+.   +.......|+|.|+|.+.++.+..             |.|.-++...           
T Consensus       110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~  189 (352)
T 2ism_A          110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR  189 (352)
T ss_dssp             EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred             EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence            8876431     11 1122   111234689999999776664321             4555555443           


Q ss_pred             ---CeEEEEccccCCeEEEEec-CCCEEEEEeCCCCE------EEEecCCCcc----ceeeec-ccCCCCC---CCCCCc
Q psy17902        305 ---ESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTL------SLWSILKKVP----THTIPV-AHGYDSS---SSEPNW  366 (454)
Q Consensus       305 ---~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i------~iwd~~~~~~----~~~~~~-~~~~~~~---~~~~~~  366 (454)
                         ...+...++..+..+.+.+ .+..+++-.....+      .|.-+..+..    ...-.. .......   -.....
T Consensus       190 ~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~a  269 (352)
T 2ism_A          190 RGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFP  269 (352)
T ss_dssp             TTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred             CCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCC
Confidence               0111222333333334444 33433333222221      1221211110    000000 0000000   001123


Q ss_pred             EEEEEEecCCCEEEEecCCCcEEEEEcCCCce------eeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902        367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRT------LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                      ...++| .+|.++++.-..+.|...++.....      ...+..  ..+.+..+++.|||..+++..+.+|
T Consensus       270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~~~~g  337 (352)
T 2ism_A          270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTSNRDG  337 (352)
T ss_dssp             EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEECSTTT
T ss_pred             CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEeCCCC
Confidence            667787 5677777766777888888764431      112211  2357899999999988777644444

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.46  E-value=0.00013  Score=64.85  Aligned_cols=203  Identities=8%  Similarity=-0.025  Sum_probs=126.2

Q ss_pred             eEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeCCCc
Q psy17902        145 ITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSSSLE  222 (454)
Q Consensus       145 V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~  222 (454)
                      +.+++|++....| ++-...+.|..+++........+..     ........+++.+. +.++++-...+.|.++++.+.
T Consensus        37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-----~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~  111 (318)
T 3sov_A           37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS  111 (318)
T ss_dssp             EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-----ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred             cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-----CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence            6789999865544 4555668899999876532111100     12234667899874 455555556789999999765


Q ss_pred             cEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEE
Q psy17902        223 HLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKSVR  298 (454)
Q Consensus       223 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~  298 (454)
                      ....+. ........+++.|.+..|+.+..  .+.|...++............-...+.|++++++..|+.+ +..+.|.
T Consensus       112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~  191 (318)
T 3sov_A          112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH  191 (318)
T ss_dssp             SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred             cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence            544443 44456789999987666666653  5788888886433222222223456899999876655544 4567899


Q ss_pred             EeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        299 VWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       299 i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .+|+...... ...........+....+..+++-...+.|..++..++.....+.
T Consensus       192 ~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          192 KSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH  246 (318)
T ss_dssp             EEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred             EEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence            9998754433 22212222233333455566666677889999987777665554

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=98.46  E-value=0.00034  Score=62.20  Aligned_cols=232  Identities=8%  Similarity=-0.027  Sum_probs=134.1

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCcc--EEeecccCC
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEH--LHTFTGHKA  232 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~--~~~~~~~~~  232 (454)
                      +|+.+. ...|+.+++...........     .....+.+++|.+... ++.+-...+.|..+++.+..  ...+...-.
T Consensus         6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~-----~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~   79 (318)
T 3sov_A            6 LLLYAN-RRDLRLVDATNGKENATIVV-----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL   79 (318)
T ss_dssp             EEEEEC-EEEEEEEETTCTTSCCEEEE-----EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred             EEEEEc-cCeEEEEECCCCceEEEEEe-----cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC
Confidence            444443 46788999886531111111     1223567899998544 44454556889999985442  122222234


Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee--CCCcEEEeeccCCeEEE
Q psy17902        233 PITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG--TDKSVRVWKIQEESQLV  309 (454)
Q Consensus       233 ~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~  309 (454)
                      ....+++.+.+..| ++-...+.|.++++........+.........+++.|.+..|+.+.  ..+.|..+++.......
T Consensus        80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~  159 (318)
T 3sov_A           80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI  159 (318)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence            56788998755444 4545678899999875433322323445678999998766665554  25778888876543332


Q ss_pred             E-ccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        310 F-NGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       310 ~-~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      + ...-..-..+.+. .++.|+ +-+..+.|..+|+.... ...+...        .......+++.. +.++.+-...+
T Consensus       160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~--------~~~~P~glav~~-~~lywtd~~~~  229 (318)
T 3sov_A          160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKG--------SLPHPFALTLFE-DILYWTDWSTH  229 (318)
T ss_dssp             EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS--------CCSCEEEEEEET-TEEEEEETTTT
T ss_pred             EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecC--------CCCCceEEEEeC-CEEEEEecCCC
Confidence            2 2222222344443 455554 44567889999986432 2222210        112266777753 44556666678


Q ss_pred             cEEEEEcCCCceeeEec
Q psy17902        387 CVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       387 ~v~iwd~~~~~~~~~~~  403 (454)
                      .|..++..+++....+.
T Consensus       230 ~V~~~~~~~G~~~~~i~  246 (318)
T 3sov_A          230 SILACNKYTGEGLREIH  246 (318)
T ss_dssp             EEEEEETTTCCSCEEEE
T ss_pred             eEEEEECCCCCceEEEe
Confidence            89999987776554443

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.46  E-value=0.00065  Score=60.71  Aligned_cols=231  Identities=10%  Similarity=-0.018  Sum_probs=123.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE-EeCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL-WSSS  220 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v-w~~~  220 (454)
                      ...+.+|.|++ +. ++.++..|.|.. ..+.+..-......   ......+..+.+.+++..++++. +|.|.. .|- 
T Consensus        79 ~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~Dg-  150 (327)
T 2xbg_A           79 DYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIPLD---PKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDS-  150 (327)
T ss_dssp             CCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECCCC---TTCSSCEEEEEEEETTEEEEEET-TCCEEEESST-
T ss_pred             CccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECccc---cCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCC-
Confidence            44688999986 44 444455665543 33333322222110   01223577888877777777665 454432 332 


Q ss_pred             Ccc-EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEE-EeC--CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902        221 LEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV-WNI--EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS  296 (454)
Q Consensus       221 ~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  296 (454)
                      +.. ......+...+..+.+.+++.+++++. .|.+.. +|-  .+.+.+.  ......+..+.+.+++.+++ ++.+|.
T Consensus       151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~  226 (327)
T 2xbg_A          151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGK  226 (327)
T ss_dssp             TSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTE
T ss_pred             CCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCce
Confidence            221 222234556789999999887776654 455544 342  2223332  23456788899988887665 456787


Q ss_pred             EEEeeccCCeEEE-Ec-c---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902        297 VRVWKIQEESQLV-FN-G---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       297 i~i~d~~~~~~~~-~~-~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                      +++.+...+.... .. .   ....+..+.+.+...+++++.+|.| ++....+..-..+.....      .+..+.++.
T Consensus       227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~------~~~~~~~v~  299 (327)
T 2xbg_A          227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKK------VPSNFYKIL  299 (327)
T ss_dssp             EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTT------SSSCCCEEE
T ss_pred             EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCC------CCCCeEEEE
Confidence            7776422222221 11 1   1223555555555556666667877 344444433333321111      112267788


Q ss_pred             EecCCCEEEEecCCCcEEEEE
Q psy17902        372 CLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       372 ~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      |.+++. +++++.+|.|.-++
T Consensus       300 ~~~~~~-~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          300 FFSPDQ-GFILGQKGILLRYV  319 (327)
T ss_dssp             EEETTE-EEEECSTTEEEEEC
T ss_pred             EECCCc-eEEEcCCceEEEEc
Confidence            876655 55556688776654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.43  E-value=0.00017  Score=63.77  Aligned_cols=185  Identities=9%  Similarity=0.160  Sum_probs=117.6

Q ss_pred             CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC----CC---EEEEeeC---CCcEEEeecc--CCeEEE
Q psy17902        242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK----NR---VISSGGT---DKSVRVWKIQ--EESQLV  309 (454)
Q Consensus       242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~i~d~~--~~~~~~  309 (454)
                      ...+++.....+-+.+||+ +++.+..+..  +.++.+.+-|.    +.   ++++...   +++|.+|++.  ++....
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~  115 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS  115 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence            3456676677788999999 7888887743  56777777663    21   3333333   5789999773  333222


Q ss_pred             Ecc-------c-cCCe-EEEE-ecCCC--EEEEEeCCCCEEEEecC-------CCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        310 FNG-------H-SRGI-DMTR-RVNDQ--QFITCGEDGTLSLWSIL-------KKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       310 ~~~-------~-~~~i-~~~~-~~~~~--~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      ...       . ..+. .|+. .+..+  ++++...+|.+..|++.       +.+.+.++....          .+-.|
T Consensus       116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs----------q~Egc  185 (355)
T 3amr_A          116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS----------QTEGM  185 (355)
T ss_dssp             CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS----------CEEEE
T ss_pred             ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC----------CcceE
Confidence            211       0 1111 2222 23233  57778888999999983       234556665432          28889


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcC-----CCceeeEeccCCCceeeeEEEE--cCCCC-EEEEEecCCCceeeeeee
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKIT-----PKRTLEFLQDIPLSGVINSLVF--TSDHK-HLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~-----~~~~~~~~~~~~~~~~v~~l~~--s~d~~-~l~~~~~~d~~i~~W~~~  439 (454)
                      ...+....|+.+-.+.-|..++..     +++.+..+........+..|++  .++++ +|++++-.++.+.+|+..
T Consensus       186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~  262 (355)
T 3amr_A          186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ  262 (355)
T ss_dssp             EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred             EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence            999988899999998666666644     2344544432223345778887  56666 788886677889999885

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.38  E-value=0.0013  Score=65.80  Aligned_cols=231  Identities=8%  Similarity=-0.028  Sum_probs=133.6

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCCCc-----cEEeecc
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSSLE-----HLHTFTG  229 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~~~-----~~~~~~~  229 (454)
                      +|+.+. ...|+..++..........       ....+..|+|.+....| ++-...+.|+.+++.+.     ....+..
T Consensus       397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-------~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~  468 (791)
T 3m0c_C          397 YLFFTN-RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR  468 (791)
T ss_dssp             EEEEEC-BSSEEEECTTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred             cccccc-ccceeEeeccCCcceeeec-------CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence            444443 3567777776544332222       33467899999855444 45455678988988542     2333333


Q ss_pred             cCCCeEEEEEcCCCCEEEE-EeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCe
Q psy17902        230 HKAPITGLAISFECDTLYS-SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEES  306 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~  306 (454)
                      .......|++.+.+..|+. -...+.|.+.++........+.........|++.|.+.+|+.+..  .+.|.+.++....
T Consensus       469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~  548 (791)
T 3m0c_C          469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  548 (791)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence            4456778999887755554 455789999999855443333334456789999998666655543  3678888887655


Q ss_pred             EEEEcc-ccCCeEEEE-ecCCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        307 QLVFNG-HSRGIDMTR-RVNDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       307 ~~~~~~-~~~~i~~~~-~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      ...+.. .......+. .+..+.|+.+ ...+.|..+++........+.....       -.....|++.. +.++++-.
T Consensus       549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~-------l~~P~glav~~-~~lYwtD~  620 (791)
T 3m0c_C          549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-------LAHPFSLAVFE-DKVFWTDI  620 (791)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT-------TSSEEEEEEET-TEEEEEET
T ss_pred             eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc-------cCCCCEEEEeC-CEEEEEEC
Confidence            543322 222233333 3345555444 4567899998854433322221110       11255666643 34555555


Q ss_pred             CCCcEEEEEcCCCceeeEe
Q psy17902        384 YDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       384 ~dg~v~iwd~~~~~~~~~~  402 (454)
                      ..+.|...+..++..+..+
T Consensus       621 ~~~~I~~~dk~tG~~~~~l  639 (791)
T 3m0c_C          621 INEAIFSANRLTGSDVNLL  639 (791)
T ss_dssp             TTTEEEEEETTTCCCCEEE
T ss_pred             CCCEEEEEeCCCCcceEEe
Confidence            6678888887777554444

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=98.37  E-value=0.00065  Score=63.51  Aligned_cols=248  Identities=9%  Similarity=-0.010  Sum_probs=142.3

Q ss_pred             CceEEEEEeCC-CcEEEEe-cCCCcEEEEeCCCccEEeeccc----CCCeEEEEE-------cCCCCEEEEEeCCC----
Q psy17902        191 PPILALAVANN-NELVASG-DNNSNIKLWSSSLEHLHTFTGH----KAPITGLAI-------SFECDTLYSSSNDR----  253 (454)
Q Consensus       191 ~~v~~~~~~~~-~~~l~~~-~~dg~v~vw~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~dg----  253 (454)
                      .....|+|+|. ...|+++ ...+.|++.|+....+..+..-    ......|+|       ++++.+|+++...+    
T Consensus       139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~  218 (496)
T 3kya_A          139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD  218 (496)
T ss_dssp             CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred             CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence            35678999983 4444444 4446788999877666665432    235889999       99999777776554    


Q ss_pred             ---cEEEEeCCC-ceeE-----EEeeccCCceeEEEeecC-CCEEEEeeCCCcEEEeecc-------CCeE---------
Q psy17902        254 ---SIKVWNIED-RAYV-----ETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQ-------EESQ---------  307 (454)
Q Consensus       254 ---~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~-------~~~~---------  307 (454)
                         .|.+++... +...     ..+... .....++++|+ +.++++-..++.|..+|+.       ++..         
T Consensus       219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~  297 (496)
T 3kya_A          219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP  297 (496)
T ss_dssp             GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred             cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence               266675443 2221     122211 23457788995 5556666677889999997       4433         


Q ss_pred             -----E-EEccccCCeEEEEecCCCE-EEEEeCCCCEEEEecCC--Cccc--eeeecccCCCCC------CCCCCcEE-E
Q psy17902        308 -----L-VFNGHSRGIDMTRRVNDQQ-FITCGEDGTLSLWSILK--KVPT--HTIPVAHGYDSS------SSEPNWIT-S  369 (454)
Q Consensus       308 -----~-~~~~~~~~i~~~~~~~~~~-l~~~~~dg~i~iwd~~~--~~~~--~~~~~~~~~~~~------~~~~~~i~-~  369 (454)
                           + .......+..+++.++++. +++-+....|+.++...  +...  ..+....+....      ...-.... .
T Consensus       298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g  377 (496)
T 3kya_A          298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG  377 (496)
T ss_dssp             TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred             cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence                 1 1111122344555566774 44555778888866532  2211  122111011000      00112244 4


Q ss_pred             EEEe-------cCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-------------Cc---------eeeeEEEEcCCC
Q psy17902        370 VACL-------HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-------------LS---------GVINSLVFTSDH  420 (454)
Q Consensus       370 ~~~s-------~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~---------~~v~~l~~s~d~  420 (454)
                      ++..       +++.++++=..+++|+.++ .++. +.++.+..             ..         .....|++++++
T Consensus       378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~  455 (496)
T 3kya_A          378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK  455 (496)
T ss_dssp             EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred             EEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence            5554       5667777777788999998 4553 33332210             01         236789999974


Q ss_pred             CEEEEEecCCCceeeeeeeCC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ..|+++-..+++|+.++....
T Consensus       456 g~lyVaD~~N~rIrki~~~~~  476 (496)
T 3kya_A          456 EMFYVHDQVGHTIRTISMEQE  476 (496)
T ss_dssp             TEEEEEETTTTEEEEEEECCC
T ss_pred             CEEEEEeCCCCEEEEEECCCC
Confidence            456666477888988877543

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.34  E-value=0.00017  Score=63.08  Aligned_cols=165  Identities=10%  Similarity=0.093  Sum_probs=111.1

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccC--CCCCCceEEEEE---eCCCcEEEEec-----
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTD--RKSYPPILALAV---ANNNELVASGD-----  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~---~~~~~~l~~~~-----  209 (454)
                      ....-.+++|++....|+.++ ..|.|..|+...+..... .+....  ......+..|.|   .|+++++++..     
T Consensus        11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af   89 (334)
T 2p9w_A           11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF   89 (334)
T ss_dssp             TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred             cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence            444556889988666666665 789999999975543322 221100  011224689999   68888777543     


Q ss_pred             --------CCCcEEEEeCC----CccEEeec--cc-----------CCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCCCc
Q psy17902        210 --------NNSNIKLWSSS----LEHLHTFT--GH-----------KAPITGLAISFECDTLYSSSND-RSIKVWNIEDR  263 (454)
Q Consensus       210 --------~dg~v~vw~~~----~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~  263 (454)
                              .+..|..||+.    ++.+....  ..           ......++..++|+..++++.. +.|...+....
T Consensus        90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~  169 (334)
T 2p9w_A           90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK  169 (334)
T ss_dssp             CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred             cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence                    25779999987    55544332  11           1247899999999999999988 88888887644


Q ss_pred             eeEEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE
Q psy17902        264 AYVETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ  307 (454)
Q Consensus       264 ~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~  307 (454)
                       .+..+.      ......+.|+++|+++.|++....|.|..+|+.....
T Consensus       170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~  218 (334)
T 2p9w_A          170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA  218 (334)
T ss_dssp             -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSC
T ss_pred             -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc
Confidence             333221      1122367999999999888887799999999886444

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.30  E-value=0.0011  Score=58.46  Aligned_cols=193  Identities=8%  Similarity=0.151  Sum_probs=123.8

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----Cc---EEEEecC---CCcEEEEeC--C
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NE---LVASGDN---NSNIKLWSS--S  220 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~v~vw~~--~  220 (454)
                      ...+++.....+-+.+||+ .++.+..++.        +.++.+..-|+    |+   ++++...   +++|.+|++  .
T Consensus        39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~  109 (355)
T 3amr_A           39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK  109 (355)
T ss_dssp             GGCEEEEEETTTEEEEEET-TSCEEEEECC--------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT
T ss_pred             CccEEEEEcCCCCEEEEcC-CCcEEEEccC--------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC
Confidence            3456777777889999999 6777666541        35666666653    22   2333333   578999976  4


Q ss_pred             CccEEeecc------cC-CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEeCC-------CceeEEEeeccCCceeEEEee
Q psy17902        221 LEHLHTFTG------HK-APITGLAI--SFE-CD-TLYSSSNDRSIKVWNIE-------DRAYVETLFGHQSAITSLDIL  282 (454)
Q Consensus       221 ~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~~~~~  282 (454)
                      ...+..+..      .. ..+..+|+  +|. +. ++++...+|.+..|++.       +.+.++++. ..+.+-.+...
T Consensus       110 ~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvD  188 (355)
T 3amr_A          110 NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAAD  188 (355)
T ss_dssp             TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEE
T ss_pred             CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEc
Confidence            444555521      11 56677888  664 43 68888889999999882       345667765 34578888899


Q ss_pred             cCCCEEEEeeCCCcEEEeecc-----CCeEEEEcccc---CCeEEEEe---cCCC-EEEEEe-CCCCEEEEecC-CCccc
Q psy17902        283 AKNRVISSGGTDKSVRVWKIQ-----EESQLVFNGHS---RGIDMTRR---VNDQ-QFITCG-EDGTLSLWSIL-KKVPT  348 (454)
Q Consensus       283 ~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~---~~i~~~~~---~~~~-~l~~~~-~dg~i~iwd~~-~~~~~  348 (454)
                      +....|+.+-.+..|..|+..     +...+...+..   ..+..+..   .++. +|++++ .+.++.+||.. +.+.+
T Consensus       189 d~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v  268 (355)
T 3amr_A          189 DEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV  268 (355)
T ss_dssp             TTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred             CCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence            888899999888766666654     23344322211   23443333   3333 666666 67899999996 66667


Q ss_pred             eeeeccc
Q psy17902        349 HTIPVAH  355 (454)
Q Consensus       349 ~~~~~~~  355 (454)
                      ..+....
T Consensus       269 g~f~Ig~  275 (355)
T 3amr_A          269 ADFRITD  275 (355)
T ss_dssp             EEEEECC
T ss_pred             EEEEecC
Confidence            7775443

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=98.29  E-value=0.00062  Score=61.50  Aligned_cols=224  Identities=12%  Similarity=-0.004  Sum_probs=117.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee--cccCCcccCCCCCCceEEEEEeCC---CcEEEEecC-C----
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV--CSSPFVKTDRKSYPPILALAVANN---NELVASGDN-N----  211 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~-d----  211 (454)
                      -.....|+|.|+|+++++ ...|.|.+++  ++...  ..+.   ...........|+|+|+   +..|+++.. .    
T Consensus        30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~  103 (352)
T 2ism_A           30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL  103 (352)
T ss_dssp             CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred             CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence            345789999999985554 5679999998  33321  1111   11123456889999998   444544433 2    


Q ss_pred             -CcEEEEeCCCc------cEE-eec---ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc----
Q psy17902        212 -SNIKLWSSSLE------HLH-TFT---GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR----  263 (454)
Q Consensus       212 -g~v~vw~~~~~------~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~----  263 (454)
                       +.|..|+....      .+. .+.   ........|+|.|+|.++++.+.             .|.|.-++....    
T Consensus       104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~  183 (352)
T 2ism_A          104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG  183 (352)
T ss_dssp             EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred             ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence             56777776432      111 122   11123468999999976666432             256666666530    


Q ss_pred             ----------eeEEEeeccCCceeEEEeec-CCCEEEEeeCCCcE------EEeeccCCe------------------EE
Q psy17902        264 ----------AYVETLFGHQSAITSLDILA-KNRVISSGGTDKSV------RVWKIQEES------------------QL  308 (454)
Q Consensus       264 ----------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i------~i~d~~~~~------------------~~  308 (454)
                                ..+. ..++. ....++|+| ++.++++-.....+      .|.-+..+.                  ..
T Consensus       184 npf~~~~~~~~~i~-a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~  261 (352)
T 2ism_A          184 NPFLGRRGARPEVY-SLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL  261 (352)
T ss_dssp             CTTTTCTTSCTTEE-EECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred             CcccCCCCCCccEE-EEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence                      1111 12343 356789999 55655443222221      122222221                  11


Q ss_pred             -EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc------eeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        309 -VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT------HTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       309 -~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                       .+..+. ....+.+..+..+++....+.|...++......      ..+.  .       ....+..+++.|+|.+.++
T Consensus       262 ~~~~~~~-ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~-------~~~rp~~v~~~pdG~lyv~  331 (352)
T 2ism_A          262 YFWPQGF-PPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--S-------GFGRLREVQVGPDGALYVT  331 (352)
T ss_dssp             EECTTCC-CEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--E-------SSCCEEEEEECTTSCEEEE
T ss_pred             EecCCCC-CCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheec--c-------cCCCeeEEEECCCCcEEEE
Confidence             121122 223344455655555556677777776543321      1111  0       1123889999999986655


Q ss_pred             ec
Q psy17902        382 GS  383 (454)
Q Consensus       382 ~~  383 (454)
                      ..
T Consensus       332 ~~  333 (352)
T 2ism_A          332 TS  333 (352)
T ss_dssp             EC
T ss_pred             Ee
Confidence            43

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=98.28  E-value=0.0021  Score=57.98  Aligned_cols=231  Identities=11%  Similarity=0.063  Sum_probs=123.5

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCc-cEEee---cccCCCeEEEEEcCC---CCEEEEEeC----C----CcEE
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLE-HLHTF---TGHKAPITGLAISFE---CDTLYSSSN----D----RSIK  256 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d----g~i~  256 (454)
                      ....|+|.|+|+++++ ..+|.|.+++..+. .+..+   .........|+|+|+   +..|+++..    +    +.|.
T Consensus        30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~  108 (354)
T 3a9g_A           30 VPWSIAPLGGGRYLVT-ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI  108 (354)
T ss_dssp             CEEEEEEEETTEEEEE-ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred             CCeEEEEcCCCeEEEE-eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence            5678999999985555 55699999986544 22221   122356889999997   555555443    2    5688


Q ss_pred             EEeCCCc-------eeE-EEeec-cCCceeEEEeecCCCEEEEeeC-------------CCcEEEeeccCC---------
Q psy17902        257 VWNIEDR-------AYV-ETLFG-HQSAITSLDILAKNRVISSGGT-------------DKSVRVWKIQEE---------  305 (454)
Q Consensus       257 iwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~---------  305 (454)
                      .|+....       +.+ ..+.. .......|.|.|+|.++++.+.             .|.|.-++....         
T Consensus       109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~  188 (354)
T 3a9g_A          109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN  188 (354)
T ss_dssp             EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred             EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence            8887643       111 11221 1123467999999987776443             244555554432         


Q ss_pred             eEEEEccccCCeEEEEecCCCEEEEEeCC-C---CEEEEecCCCcc----ceeeec-ccCCCC----CCCCCCcEEEEEE
Q psy17902        306 SQLVFNGHSRGIDMTRRVNDQQFITCGED-G---TLSLWSILKKVP----THTIPV-AHGYDS----SSSEPNWITSVAC  372 (454)
Q Consensus       306 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-g---~i~iwd~~~~~~----~~~~~~-~~~~~~----~~~~~~~i~~~~~  372 (454)
                      ..+...++..+..+.+.+....|+++... +   .|.+..  .+..    ...-.. ..+...    ..........++|
T Consensus       189 ~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~  266 (354)
T 3a9g_A          189 SPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF  266 (354)
T ss_dssp             CCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred             CcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence            12233445455555555523334433321 1   133222  1110    000000 000000    0001223788888


Q ss_pred             e-------cCCCEEEEecCCCcEEEEEcCCC-cee--eEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        373 L-------HNSDLVASGSYDGCVKLWKITPK-RTL--EFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       373 s-------~~~~~l~~~~~dg~v~iwd~~~~-~~~--~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      .       .+|.++++.-..+.|...++... ...  ..+.. .....+..+++.|||...++.
T Consensus       267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~pDG~lyv~~  329 (354)
T 3a9g_A          267 VHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDDDGGILIST  329 (354)
T ss_dssp             CCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECTTSCEEEEE
T ss_pred             ECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECCCCcEEEEE
Confidence            4       56777777777788999988753 222  12221 124578999999999766665

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=98.25  E-value=0.0045  Score=64.71  Aligned_cols=280  Identities=10%  Similarity=0.055  Sum_probs=145.7

Q ss_pred             CCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe--CCCcEEEEecCC
Q psy17902        141 HRASITCIAVTSD------SKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA--NNNELVASGDNN  211 (454)
Q Consensus       141 h~~~V~~~~~s~~------~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d  211 (454)
                      -...|.|+++.|.      ++++++|+. |++|+|+++.+.+.+....+.     ......++.+.  ....+|..|-.|
T Consensus       552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~-----~~~~p~si~l~~~~~~~~L~igl~d  626 (1158)
T 3ei3_A          552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLG-----GEIIPRSILMTTFESSHYLLCALGD  626 (1158)
T ss_dssp             CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECC-----SSCCEEEEEEEEETTEEEEEEEETT
T ss_pred             CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECC-----CCCCCcEEEEEEeCCCcEEEEEeCC
Confidence            3457999999863      479999997 999999999876655433321     11223333332  344688999999


Q ss_pred             CcEEEEeC---CCccEE--eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE-eecC-
Q psy17902        212 SNIKLWSS---SLEHLH--TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD-ILAK-  284 (454)
Q Consensus       212 g~v~vw~~---~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~-  284 (454)
                      |.+.-+.+   ++....  +..--..++.-..+...+..-+.+..+....+|.-+ +..... .-....+.+++ |+.. 
T Consensus       627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~  704 (1158)
T 3ei3_A          627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDG  704 (1158)
T ss_dssp             SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSS
T ss_pred             CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCccc
Confidence            98866654   222221  111123455544454444333333334444455433 222211 11122333333 3322 


Q ss_pred             -CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCCCEEEEEe----------------------------
Q psy17902        285 -NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVNDQQFITCG----------------------------  332 (454)
Q Consensus       285 -~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~~~l~~~~----------------------------  332 (454)
                       ..-++.. .++.++|..+......   .+.-...+-..+..+..+.++.+.                            
T Consensus       705 ~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  783 (1158)
T 3ei3_A          705 YPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV  783 (1158)
T ss_dssp             STTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred             CCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence             1233333 3455888776432211   111111111122222222222111                            


Q ss_pred             ---------------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe---cC-CCEEEEec----
Q psy17902        333 ---------------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL---HN-SDLVASGS----  383 (454)
Q Consensus       333 ---------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~-~~~l~~~~----  383 (454)
                                           .-+.|+++|..+.+.+..+.....        ..+.+++..   .+ ..+|++|+    
T Consensus       784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n--------E~~~sv~~v~~~~~~~~~lvVGTa~~~  855 (1158)
T 3ei3_A          784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN--------EYALSLVSCKLGKDPNTYFIVGTAMVY  855 (1158)
T ss_dssp             CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT--------EEEEEEEEECCTTCCCCEEEEEEEECC
T ss_pred             cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC--------cceEEEEEEEEccCCCEEEEEEeeecC
Confidence                                 123477778777776666654332        225555532   22 35888886    


Q ss_pred             ------CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        384 ------YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       384 ------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                            ..|.|.+|++..+ .+..+......++|++++-- +| +|+++.  ...|++|+....
T Consensus       856 ~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~-~g-~Lla~i--g~~l~vy~l~~~  914 (1158)
T 3ei3_A          856 PEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF-NG-KLLASI--NSTVRLYEWTTE  914 (1158)
T ss_dssp             TTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE-TT-EEEEEE--TTEEEEEEECTT
T ss_pred             CCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee-CC-EEEEEc--CCEEEEEECCCC
Confidence                  3588999999844 45445444567889998754 34 566663  467888877543

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.24  E-value=0.0023  Score=64.00  Aligned_cols=227  Identities=8%  Similarity=-0.026  Sum_probs=130.4

Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCc----eeEEEeeccCCceeE
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDR----AYVETLFGHQSAITS  278 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~  278 (454)
                      +|+.+. ...|+..++.......+......+.+|+|.+....|+.+ ...+.|+.+++...    .....+.........
T Consensus       397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G  475 (791)
T 3m0c_C          397 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG  475 (791)
T ss_dssp             EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             cccccc-ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence            344433 356788888554444444455678899999865555544 45678999998753    222233323455678


Q ss_pred             EEeecCCC-EEEEeeCCCcEEEeeccCCeEEEEc-ccc-CCeEEEEecCCCEEEEEe-CC-CCEEEEecCCCccceeeec
Q psy17902        279 LDILAKNR-VISSGGTDKSVRVWKIQEESQLVFN-GHS-RGIDMTRRVNDQQFITCG-ED-GTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       279 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~-~~i~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~  353 (454)
                      |++.+.+. ++++-...+.|.+.++.......+. ... .+...+..+..+.|+... .. +.|.+.++........+..
T Consensus       476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~  555 (791)
T 3m0c_C          476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  555 (791)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred             eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence            99987764 5555556789999999876554332 222 233333334445554443 33 6788888754433222211


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                               ...+...|++++.+..|+.+ ...+.|..+++........+..........+|++.  +.+|+.+-...+.
T Consensus       556 ---------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~  624 (791)
T 3m0c_C          556 ---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA  624 (791)
T ss_dssp             ---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             ---------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCE
Confidence                     12348999999876655555 44668999998655443333321112234466664  4577777456677


Q ss_pred             eeeeeeeCCC
Q psy17902        433 FGRWKTIKGV  442 (454)
Q Consensus       433 i~~W~~~~~~  442 (454)
                      |...+...+.
T Consensus       625 I~~~dk~tG~  634 (791)
T 3m0c_C          625 IFSANRLTGS  634 (791)
T ss_dssp             EEEEETTTCC
T ss_pred             EEEEeCCCCc
Confidence            7766655443

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.18  E-value=0.0061  Score=59.51  Aligned_cols=200  Identities=9%  Similarity=-0.028  Sum_probs=125.6

Q ss_pred             CCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCC
Q psy17902        143 ASITCIAVTSDSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSS  220 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~  220 (454)
                      ..+..|+|++.+..|+.+ ..++.|..+++........+.      ........|++.+.+..| ++-...+.|.+.++.
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d  110 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD  110 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence            357899999976666544 556899999987654332222      122356788998765544 454556889999996


Q ss_pred             CccEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCc
Q psy17902        221 LEHLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKS  296 (454)
Q Consensus       221 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~  296 (454)
                      +.....+. ..-.....|++.|....|+.+..  .+.|...++...... .+...-.....|++++++..|+.+ ...+.
T Consensus       111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~LY~aD~~~~~  189 (628)
T 4a0p_A          111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRRLYWTDLDTNL  189 (628)
T ss_dssp             STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred             CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCEEEEEECCCCE
Confidence            65544443 34456789999996666666653  567888888654432 332344567899999977666555 45678


Q ss_pred             EEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        297 VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       297 i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      |..+++.......+.........+....+..+++-...+.|...|..++....
T Consensus       190 I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~  242 (628)
T 4a0p_A          190 IESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRT  242 (628)
T ss_dssp             EEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred             EEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceE
Confidence            89999876443322222222223333345555555567888888876665433

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.18  E-value=3.3e-05  Score=76.63  Aligned_cols=226  Identities=9%  Similarity=0.000  Sum_probs=127.3

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCC----ccE-EeecccCCCeEE
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSL----EHL-HTFTGHKAPITG  236 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~----~~~-~~~~~~~~~v~~  236 (454)
                      .+.|+..++.+......+.       ....+..|+|.+.+..|+.+. ..+.|+.+++.+    ... ..+.........
T Consensus       385 ~~~I~~id~~~~~~~~~~~-------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g  457 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG  457 (699)
T ss_dssp             TTC-CEECTTSCCEECCSC-------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred             ccceEEEeCCCCcceeeec-------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence            3577888887655443332       223567889998766666654 457899999854    222 222222234566


Q ss_pred             EEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEEEc-c
Q psy17902        237 LAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLVFN-G  312 (454)
Q Consensus       237 ~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~-~  312 (454)
                      |++.+.+ +++++-...+.|.++++........+.........|+++|.+.+|+.+..  .+.|.++++.......+. .
T Consensus       458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~  537 (699)
T 1n7d_A          458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  537 (699)
T ss_dssp             EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred             EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence            8887544 44444456788999998765433333322345678999987655554442  267888887654333222 1


Q ss_pred             -ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902        313 -HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL  390 (454)
Q Consensus       313 -~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i  390 (454)
                       ...+....+.+. +.++++-+..+.|.++++.... ...+.....      .......|++..+ .++++....+.|..
T Consensus       538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~------~~~~P~glavd~~-~lywtd~~~~~V~~  609 (699)
T 1n7d_A          538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEK------RLAHPFSLAVFED-KVFWTDIINEAIFS  609 (699)
T ss_dssp             SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSS------SCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred             CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCC------cCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence             112222333334 4455555567889999986432 222211100      0111334555544 45556666789999


Q ss_pred             EEcCCCceeeEec
Q psy17902        391 WKITPKRTLEFLQ  403 (454)
Q Consensus       391 wd~~~~~~~~~~~  403 (454)
                      ++..+++.+..+.
T Consensus       610 ~d~~~G~~~~~i~  622 (699)
T 1n7d_A          610 ANRLTGSDVNLLA  622 (699)
T ss_dssp             EETTTEEEEECCC
T ss_pred             EEccCCCceEEee
Confidence            9988777666654

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=98.15  E-value=0.0022  Score=57.86  Aligned_cols=144  Identities=8%  Similarity=0.035  Sum_probs=76.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-CcccCCCCCCceEEEEEeCC---CcEEEEec-C-------C
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-FVKTDRKSYPPILALAVANN---NELVASGD-N-------N  211 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d  211 (454)
                      ....|+|.|+|++|+++...|.|++++... .....+. ..............|+|+|+   +..|+++. .       .
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~   97 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG   97 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence            468999999998444556789999998542 2111111 10011122346789999995   44444432 2       1


Q ss_pred             CcEEEEeCCCc-----cEEe----ec---ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCce--
Q psy17902        212 SNIKLWSSSLE-----HLHT----FT---GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDRA--  264 (454)
Q Consensus       212 g~v~vw~~~~~-----~~~~----~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~--  264 (454)
                      ..|..|+++..     ....    +.   ........|+|.|+|.++++.+.             .|.|.-++....-  
T Consensus        98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~  177 (353)
T 2g8s_A           98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD  177 (353)
T ss_dssp             EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred             eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence            24555655221     1111    11   11112457999999965555433             2467777765320  


Q ss_pred             ----------eEEEe-eccCCceeEEEeec-CCCEEE
Q psy17902        265 ----------YVETL-FGHQSAITSLDILA-KNRVIS  289 (454)
Q Consensus       265 ----------~~~~~-~~~~~~v~~~~~~~-~~~~l~  289 (454)
                                ....+ .++. ....++|+| ++.+++
T Consensus       178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~  213 (353)
T 2g8s_A          178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWL  213 (353)
T ss_dssp             TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEE
T ss_pred             CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEE
Confidence                      11111 2443 357899999 455444

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=98.13  E-value=0.0021  Score=57.98  Aligned_cols=242  Identities=12%  Similarity=0.044  Sum_probs=125.0

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE---Eee----cccCCCeEEEEEcCC---CCEEEEEeC--------CC
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHL---HTF----TGHKAPITGLAISFE---CDTLYSSSN--------DR  253 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~~--------dg  253 (454)
                      ....|+|.|+|+.|+++...|.|++++..+...   ..+    .........|+|+|+   +..|+.+..        ..
T Consensus        19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~   98 (353)
T 2g8s_A           19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT   98 (353)
T ss_dssp             SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred             CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence            467899999998334445579999998644321   111    122345789999996   455554432        23


Q ss_pred             cEEEEeCCCc--e--eEEE-eec------cCCceeEEEeecCCCEEEEeeCC-------------CcEEEeeccCC----
Q psy17902        254 SIKVWNIEDR--A--YVET-LFG------HQSAITSLDILAKNRVISSGGTD-------------KSVRVWKIQEE----  305 (454)
Q Consensus       254 ~i~iwd~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~----  305 (454)
                      .|..|++...  .  .... +..      .......|.|.|+|.+.++.+..             |.|.-++....    
T Consensus        99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~  178 (353)
T 2g8s_A           99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD  178 (353)
T ss_dssp             EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred             EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence            5666766432  1  1111 111      11123579999999766654332             45666665432    


Q ss_pred             ----------eEEEEccccCCeEEEEecCCCEEEEEeCC--CCEEEEecCCCcc----cee---------eec-----cc
Q psy17902        306 ----------SQLVFNGHSRGIDMTRRVNDQQFITCGED--GTLSLWSILKKVP----THT---------IPV-----AH  355 (454)
Q Consensus       306 ----------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~----~~~---------~~~-----~~  355 (454)
                                ..+...++..+..+.+.+....|+++...  +.=.|.-+..+..    ...         +..     ..
T Consensus       179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T 2g8s_A          179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVA  258 (353)
T ss_dssp             CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCT
T ss_pred             CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCC
Confidence                      11223344444445554434455544322  1122222221111    000         000     00


Q ss_pred             CCCCC---CCCCCcEEEEEEec-------CCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEE
Q psy17902        356 GYDSS---SSEPNWITSVACLH-------NSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       356 ~~~~~---~~~~~~i~~~~~s~-------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~  424 (454)
                      .....   -.+...+..+.|..       +|.++++.-..+.|...++..+......... .....+..+++.|||...+
T Consensus       259 ~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv  338 (353)
T 2g8s_A          259 GTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYV  338 (353)
T ss_dssp             TSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEE
T ss_pred             CccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEE
Confidence            00000   01122477788864       5677777777888998888765433221111 1235789999999999766


Q ss_pred             EEecCCCce
Q psy17902        425 AGIGTEHRF  433 (454)
Q Consensus       425 ~~~~~d~~i  433 (454)
                      ++-..++.|
T Consensus       339 ~td~~~g~I  347 (353)
T 2g8s_A          339 LTDESSGEL  347 (353)
T ss_dssp             EECSTTEEE
T ss_pred             EEeCCCCEE
Confidence            652234544

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=98.13  E-value=0.0011  Score=58.33  Aligned_cols=226  Identities=11%  Similarity=0.099  Sum_probs=116.9

Q ss_pred             CCCEEEEEe-CC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEeCCC
Q psy17902        153 DSKHVYSAC-KD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWSSSL  221 (454)
Q Consensus       153 ~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~~~  221 (454)
                      ++.+++.|+ .+     ..+.+||+.+..-........    .... .+++ ..++.+++.|+.+     ..+.+||+..
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~----~r~~-~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~   87 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR----KRRY-VASV-SLHDRIYVIGGYDGRSRLSSVECLDYTA   87 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS----CCBS-CEEE-EETTEEEEECCBCSSCBCCCEEEEETTC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh----hhcc-ccEE-EECCEEEEEcCCCCCccCceEEEEECCC
Confidence            445666666 32     368888987765332221111    0011 1122 2356777777754     4688999833


Q ss_pred             cc------EEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEEeeccCC-ceeEEEeecCCCEEE
Q psy17902        222 EH------LHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVETLFGHQS-AITSLDILAKNRVIS  289 (454)
Q Consensus       222 ~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~  289 (454)
                      ..      +..+........++.+  ++..++.|+.+     ..+.+||+.+.+....-..... .-.+++. -++.+++
T Consensus        88 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv  164 (301)
T 2vpj_A           88 DEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYC  164 (301)
T ss_dssp             CTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEE
T ss_pred             CCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEE
Confidence            32      2222211222222222  56677777643     3588999887654322111111 1112222 2677777


Q ss_pred             EeeCC-----CcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCC
Q psy17902        290 SGGTD-----KSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGY  357 (454)
Q Consensus       290 ~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~  357 (454)
                      .|+.+     ..+.+||+.+..-........+  -..+...++..++.|+.+     ..+.+||+.+..-...-..... 
T Consensus       165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-  243 (301)
T 2vpj_A          165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP-  243 (301)
T ss_dssp             ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC-
T ss_pred             ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc-
Confidence            77754     4688999988766543322211  123333466667777753     4689999877643222111110 


Q ss_pred             CCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902        358 DSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK  396 (454)
Q Consensus       358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~  396 (454)
                            ......+.  -++.+++.|+.+     ..|.+||+.+.
T Consensus       244 ------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  279 (301)
T 2vpj_A          244 ------RCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID  279 (301)
T ss_dssp             ------CBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred             ------ccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence                  01112222  267777888765     35788888765

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.13  E-value=0.0029  Score=55.45  Aligned_cols=166  Identities=8%  Similarity=0.089  Sum_probs=105.3

Q ss_pred             ecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeecc-------CCceeEEEe---ecCCCEEEEeeC--
Q psy17902        227 FTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGH-------QSAITSLDI---LAKNRVISSGGT--  293 (454)
Q Consensus       227 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~~--  293 (454)
                      +........++.|++....|+.++ ..++|..|+...+.........       ...+..|.|   .|++.++++...  
T Consensus         8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~   87 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK   87 (334)
T ss_dssp             ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred             ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence            344445566889988666777766 6899999999865443332222       113578999   688777765431  


Q ss_pred             -----------CCcEEEeecc---CCeEEEEcc---cc------------CCeEEEEecCCCEEEEEeCC-CCEEEEecC
Q psy17902        294 -----------DKSVRVWKIQ---EESQLVFNG---HS------------RGIDMTRRVNDQQFITCGED-GTLSLWSIL  343 (454)
Q Consensus       294 -----------dg~i~i~d~~---~~~~~~~~~---~~------------~~i~~~~~~~~~~l~~~~~d-g~i~iwd~~  343 (454)
                                 +..|..||+.   +++.+....   ..            ....+..-..++..++++.. +.|..++..
T Consensus        88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd  167 (334)
T 2p9w_A           88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD  167 (334)
T ss_dssp             TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred             cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence                       5779999999   666552211   11            12344445568888888877 777777765


Q ss_pred             CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      .. .+..+......   .......+.|+++|+|++|++....|.|..+|+...
T Consensus       168 G~-~~~~~~~~~~~---~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p  216 (334)
T 2p9w_A          168 GK-TVSTFAWESGN---GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP  216 (334)
T ss_dssp             SC-CEEEEEECCCC---SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred             CC-EEeeeeecCCC---cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence            43 22222111100   011223678999999998887777999999998843

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=98.13  E-value=0.0081  Score=58.65  Aligned_cols=229  Identities=9%  Similarity=0.001  Sum_probs=137.1

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeCCCccEEeec-ccCC
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSSSLEHLHTFT-GHKA  232 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~~~~~~~~~~-~~~~  232 (454)
                      .+|+.+ ....|+..++.+......++.     .....+..|+|++.+..|+.+ ..++.|..+++.+.....+. ....
T Consensus         7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~-----~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~   80 (628)
T 4a0p_A            7 AFLLFS-RRADIRRISLETNNNNVAIPL-----TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD   80 (628)
T ss_dssp             CEEEEE-ETTEEEEEESSCTTCEEECCC-----CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred             cEEEEE-eCCcEEEEECCCCCcceEEEc-----CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence            355554 457899999987554333332     233468899999866555544 55789999998665444332 2224


Q ss_pred             CeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEE
Q psy17902        233 PITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLV  309 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~  309 (454)
                      ....|++.+.+..|+.+ ...+.|.+.++........+...-.....|++.|....|+.+..  .+.|...++.......
T Consensus        81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~  160 (628)
T 4a0p_A           81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT  160 (628)
T ss_dssp             CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred             CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence            57789998765555544 45678999998754332222233455689999986655555542  5677777777654443


Q ss_pred             -EccccCCeEEEEecCCCEEEE-EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902        310 -FNGHSRGIDMTRRVNDQQFIT-CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC  387 (454)
Q Consensus       310 -~~~~~~~i~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~  387 (454)
                       ......+......+.++.|+. -...+.|..+++..... ..+...         ......+++.. +.++++-...+.
T Consensus       161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~---------l~~P~glav~~-~~ly~tD~~~~~  229 (628)
T 4a0p_A          161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD---------LPHPFGLTQYQ-DYIYWTDWSRRS  229 (628)
T ss_dssp             EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC---------CSCEEEEEEET-TEEEEEETTTTE
T ss_pred             EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc---------CCCceEEEEEC-CEEEEecCCCCE
Confidence             222222333333444555544 44678899999865433 222211         11256777765 445555556788


Q ss_pred             EEEEEcCCCceee
Q psy17902        388 VKLWKITPKRTLE  400 (454)
Q Consensus       388 v~iwd~~~~~~~~  400 (454)
                      |...|..++....
T Consensus       230 I~~~dk~tg~~~~  242 (628)
T 4a0p_A          230 IERANKTSGQNRT  242 (628)
T ss_dssp             EEEEETTTCCSCE
T ss_pred             EEEEECCCCCceE
Confidence            9999877664433

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.08  E-value=2.5e-05  Score=77.44  Aligned_cols=203  Identities=8%  Similarity=0.006  Sum_probs=121.0

Q ss_pred             CCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCC----ceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEE
Q psy17902        143 ASITCIAVTSDSKHVYSAC-KDGIIIKWLLETR----SKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKL  216 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~v  216 (454)
                      ..+..|+|++.+..|+.+. ..+.|..+++.+.    .....+.      ........|++.+. ++++++-...+.|.+
T Consensus       406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~------~~~~~P~glavD~~~g~LY~tD~~~~~I~v  479 (699)
T 1n7d_A          406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSV  479 (699)
T ss_dssp             TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC------SCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred             cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe------CCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence            3467889998766666554 4578999988751    1111111      11223456788754 444445455689999


Q ss_pred             EeCCCccEEeecc-cCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEee
Q psy17902        217 WSSSLEHLHTFTG-HKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGG  292 (454)
Q Consensus       217 w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~  292 (454)
                      +++.+..+..+.. .......|++.|.+.+|+.+..  .+.|.++++........+...-...+.|+|+|++..| ++-+
T Consensus       480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~  559 (699)
T 1n7d_A          480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS  559 (699)
T ss_dssp             EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred             EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence            9997666555432 2345678899987666655543  2678888876432222222223445789999876544 4445


Q ss_pred             CCCcEEEeeccCCeEEEEccc----cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        293 TDKSVRVWKIQEESQLVFNGH----SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~~~~~~----~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      ..+.|.++++.......+...    ..+... ....+..+++....+.|..++..++..+..+.
T Consensus       560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gl-avd~~~lywtd~~~~~V~~~d~~~G~~~~~i~  622 (699)
T 1n7d_A          560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSL-AVFEDKVFWTDIINEAIFSANRLTGSDVNLLA  622 (699)
T ss_dssp             TTTEEEEECSSSSCCEEECCCSSSCSSCCCC-EEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred             CCCeEEEEccCCCceEEEEecCCcCCCceEe-EEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence            567899999875443333211    112222 22344556666677899999988777666654

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=98.08  E-value=0.0058  Score=55.25  Aligned_cols=235  Identities=10%  Similarity=0.123  Sum_probs=152.4

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SLEHL  224 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~  224 (454)
                      +.-.+|..+.||.-. ..++.|+|+++...+....+       ...|.-=.|-.+. .|+..+ +..|+-|++  +..+.
T Consensus        70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-------~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~  139 (494)
T 1bpo_A           70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPV  139 (494)
T ss_dssp             EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-------SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCE
T ss_pred             eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-------CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCch
Confidence            455789888888776 68999999999888877653       2245555555444 344444 368999999  44666


Q ss_pred             EeecccC----CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC---CEEEE
Q psy17902        225 HTFTGHK----APITGLAISFECDTLYSSS-------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN---RVISS  290 (454)
Q Consensus       225 ~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~  290 (454)
                      +.+..|.    ..|..-..+++.+.++..+       -.|.+.+|..+.+. .+.+.+|......+.+..+.   .+++.
T Consensus       140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~f  218 (494)
T 1bpo_A          140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF  218 (494)
T ss_dssp             EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEE
T ss_pred             hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEE
Confidence            6665543    4566677788888776543       24788999988543 45677887666555543221   23443


Q ss_pred             eeC---CCcEEEeeccCC---e------EE--EEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        291 GGT---DKSVRVWKIQEE---S------QL--VFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       291 ~~~---dg~i~i~d~~~~---~------~~--~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      +..   .+.++|.++...   .      ..  .+..   ..-++..-....-+.+...+.-|.|++||+.++.++..-..
T Consensus       219 a~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI  298 (494)
T 1bpo_A          219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI  298 (494)
T ss_dssp             EECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             EEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc
Confidence            333   268888888543   1      11  1111   22245555566678888999999999999999999888765


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      ....         |...+.+....=+++....|.|.--.++....+..
T Consensus       299 s~~~---------iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy  337 (494)
T 1bpo_A          299 SGET---------IFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY  337 (494)
T ss_dssp             CSSC---------EEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred             cCCc---------eEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence            4322         55555555544555556788887777776655443

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=98.04  E-value=0.0056  Score=59.67  Aligned_cols=223  Identities=8%  Similarity=-0.024  Sum_probs=123.5

Q ss_pred             CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCCcc--EEeecccCCCeEEEEE
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSLEH--LHTFTGHKAPITGLAI  239 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~~~--~~~~~~~~~~v~~~~~  239 (454)
                      ...|+..++...........     .....+..++|++.+..|+.+. ..+.|..+++++..  ...+...-.....+++
T Consensus        17 ~~~I~~i~~~~~~~~~~~~~-----~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv   91 (619)
T 3s94_A           17 RRDLRLVDATNGKENATIVV-----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC   91 (619)
T ss_dssp             SSBEEEECCC---------C-----BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred             cccEEEEeCCCCcceEEEEE-----cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Confidence            46788888875431111111     2334678999998766666554 46788889985542  2233333357889999


Q ss_pred             cCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEEEc-cccC
Q psy17902        240 SFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLVFN-GHSR  315 (454)
Q Consensus       240 ~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~-~~~~  315 (454)
                      .+.+..|+.+ ...+.|.+.++........+...-.....|++.|.+..|+.+..  .+.|...++.......+. ....
T Consensus        92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~  171 (619)
T 3s94_A           92 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY  171 (619)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred             EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC
Confidence            9865555544 55789999998755432223234455688999997665555543  356766676654333222 2222


Q ss_pred             CeEEEEe-cCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        316 GIDMTRR-VNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       316 ~i~~~~~-~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ....+.. +.++.|+ +-...+.|..+++............      ..+   ...|++..+ .++++-...+.|...|.
T Consensus       172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~------~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~  241 (619)
T 3s94_A          172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS------LPH---PFALTLFED-ILYWTDWSTHSILACNK  241 (619)
T ss_dssp             SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred             CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC------CCC---ceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence            2233333 3445444 4446778999988654332221100      012   235666554 45555556788999998


Q ss_pred             CCCceee
Q psy17902        394 TPKRTLE  400 (454)
Q Consensus       394 ~~~~~~~  400 (454)
                      .+++...
T Consensus       242 ~tg~~~~  248 (619)
T 3s94_A          242 YTGEGLR  248 (619)
T ss_dssp             SSCCCCE
T ss_pred             CCCcccE
Confidence            7775443

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=98.01  E-value=0.0026  Score=56.02  Aligned_cols=226  Identities=11%  Similarity=0.121  Sum_probs=115.7

Q ss_pred             CCEEEEEeCC----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEeCCCccE
Q psy17902        154 SKHVYSACKD----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWSSSLEHL  224 (454)
Q Consensus       154 ~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~~~~~~  224 (454)
                      +.+++.|+.+    ..+.+||+.+..-......... . .  . .+++. -++.+++.|+.+     ..+.+||.....-
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r-~--~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W   89 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR-R-C--R-AGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQW   89 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC-C-B--S-CEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc-c-c--c-ceEEE-ECCEEEEEeCcCCCccccceEEECCCCCce
Confidence            3455566543    3578888877643222111110 0 1  1 11222 267777777754     3588888844333


Q ss_pred             Eeecc---cCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCceeEEEeec-cCCceeEEEeecCCCEEEEeeCC-
Q psy17902        225 HTFTG---HKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDRAYVETLFG-HQSAITSLDILAKNRVISSGGTD-  294 (454)
Q Consensus       225 ~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d-  294 (454)
                      ..+..   ......++.+  ++..++.|+.++     .+.+||+.+.+....-.. ....-.+++. -++.+++.|+.+ 
T Consensus        90 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~  166 (302)
T 2xn4_A           90 TSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDV  166 (302)
T ss_dssp             EEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEET
T ss_pred             eeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCC
Confidence            22221   1112222222  567777777553     578899887654322111 1111112222 256677777653 


Q ss_pred             ------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCCC
Q psy17902        295 ------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSSS  361 (454)
Q Consensus       295 ------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~  361 (454)
                            ..+.+||+.+..-........  .-..+...++..++.|+.+     ..+.+||+.+..-...-.....     
T Consensus       167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-----  241 (302)
T 2xn4_A          167 ASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC-----  241 (302)
T ss_dssp             TTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC-----
T ss_pred             CCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc-----
Confidence                  358899998876554322211  1123334466677777754     4688999876543222111110     


Q ss_pred             CCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCCc
Q psy17902        362 SEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPKR  397 (454)
Q Consensus       362 ~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~  397 (454)
                       .. ....+.  -++.+++.|+.++     .|.+||+.+..
T Consensus       242 -r~-~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          242 -RR-NAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             -CB-SCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred             -cc-cCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence             00 011222  2677888887653     48999988763

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.98  E-value=0.0036  Score=55.19  Aligned_cols=224  Identities=10%  Similarity=0.041  Sum_probs=116.0

Q ss_pred             CEEEEEeCC--CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC----CcEEEEeCCCccEEee-
Q psy17902        155 KHVYSACKD--GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----SNIKLWSSSLEHLHTF-  227 (454)
Q Consensus       155 ~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vw~~~~~~~~~~-  227 (454)
                      .+++.|+.+  ..+.+||..+..-........   .. ....++.  -++.+++.|+.+    ..+.+||+....-..+ 
T Consensus        13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~---~r-~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~   86 (306)
T 3ii7_A           13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFE---KR-RDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL   86 (306)
T ss_dssp             EEEEEECCSSTTSEEEEETTTTEEEECCCCSC---CC-BSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred             eEEEEeCCCCCceEEEecCCCCCEecCCCCCc---cc-ceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence            355556543  578889988765332222111   11 1111222  366777777754    5788889844332222 


Q ss_pred             --cccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCceeEEEeeccC-CceeEEEeecCCCEEEEeeC-----
Q psy17902        228 --TGHKAPITGLAISFECDTLYSSSND------RSIKVWNIEDRAYVETLFGHQ-SAITSLDILAKNRVISSGGT-----  293 (454)
Q Consensus       228 --~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~-----  293 (454)
                        ........++.+  ++.+++.|+.+      ..+.+||+.+.+....-.... ..-.+++. -++.+++.|+.     
T Consensus        87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~  163 (306)
T 3ii7_A           87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNV  163 (306)
T ss_dssp             CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTT
T ss_pred             CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCC
Confidence              211112222222  56677777755      468999998775432211111 11112222 25667777764     


Q ss_pred             ----CCcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCCCC
Q psy17902        294 ----DKSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       294 ----dg~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~  362 (454)
                          -..+.+||+.+..-.........  -..+...++..++.|+.+     ..+.+||+.+..-...-.....      
T Consensus       164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------  237 (306)
T 3ii7_A          164 SGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK------  237 (306)
T ss_dssp             TCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC------
T ss_pred             cccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC------
Confidence                34588999988766544322211  123333466667776643     4688899877532211111110      


Q ss_pred             CCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902        363 EPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK  396 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~  396 (454)
                       .....++.+  ++.+++.|+.+     ..+.+||+.+.
T Consensus       238 -r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~  273 (306)
T 3ii7_A          238 -GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD  273 (306)
T ss_dssp             -BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred             -ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence             011222223  67788888754     46888998776

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.98  E-value=0.003  Score=55.55  Aligned_cols=214  Identities=10%  Similarity=0.132  Sum_probs=107.7

Q ss_pred             CCcEEEEec-CC-----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCce--
Q psy17902        201 NNELVASGD-NN-----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRA--  264 (454)
Q Consensus       201 ~~~~l~~~~-~d-----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~--  264 (454)
                      ++.+++.|+ .+     ..+.+||+....-..+..   ......++.  .++..++.|+.+     ..+.+||+.+.+  
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~   91 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG   91 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence            445666666 32     367888884433332221   111122222  356677777754     468999988765  


Q ss_pred             -eEEE--eeccCCceeEEEeecCCCEEEEeeCC-----CcEEEeeccCCeEEEEcccc--CCeEEEEecCCCEEEEEeCC
Q psy17902        265 -YVET--LFGHQSAITSLDILAKNRVISSGGTD-----KSVRVWKIQEESQLVFNGHS--RGIDMTRRVNDQQFITCGED  334 (454)
Q Consensus       265 -~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~i~~~~~~~~~~l~~~~~d  334 (454)
                       ....  +...... .+++. .++.+++.|+.+     ..+.+||+.+..-.......  ..-..+...++..++.|+.+
T Consensus        92 ~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~  169 (301)
T 2vpj_A           92 VWYSVAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYD  169 (301)
T ss_dssp             CCEEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBC
T ss_pred             eeEECCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCC
Confidence             3221  1111111 12222 256777777654     35888998887655332211  11123333466667777654


Q ss_pred             -----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEecc
Q psy17902        335 -----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       335 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~  404 (454)
                           ..+.+||+.+..-...-.....       ......+.  -++.+++.|+.+     ..|.+||+.+..- ..+..
T Consensus       170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~-------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~  239 (301)
T 2vpj_A          170 GLNILNSVEKYDPHTGHWTNVTPMATK-------RSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW-TTVTS  239 (301)
T ss_dssp             SSCBCCCEEEEETTTTEEEEECCCSSC-------CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE-EEECC
T ss_pred             CCcccceEEEEeCCCCcEEeCCCCCcc-------cccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcE-EECCC
Confidence                 4688899876543222111110       00112222  266777888764     4689999987643 33333


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      .+....-.+++.. +++.++.| |.+
T Consensus       240 ~p~~r~~~~~~~~-~~~i~v~G-G~~  263 (301)
T 2vpj_A          240 MTTPRCYVGATVL-RGRLYAIA-GYD  263 (301)
T ss_dssp             CSSCCBSCEEEEE-TTEEEEEC-CBC
T ss_pred             CCCcccceeEEEE-CCEEEEEc-CcC
Confidence            2222222222222 56555555 544

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=97.96  E-value=0.0095  Score=53.68  Aligned_cols=226  Identities=11%  Similarity=0.024  Sum_probs=118.0

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEEeCC---CcEEEEecC----C--
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAVANN---NELVASGDN----N--  211 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~----d--  211 (454)
                      -.....|+|.|+|+++ ++..+|.|.+++. ++. .+..+.   ...........|+++|+   +..|+++..    +  
T Consensus        28 l~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~~~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~  102 (354)
T 3a9g_A           28 LEVPWSIAPLGGGRYL-VTERPGRLVLISP-SGKKLVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH  102 (354)
T ss_dssp             CSCEEEEEEEETTEEE-EEETTTEEEEECS-SCEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred             CCCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCceEeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence            4457899999999744 4566699999973 333 122111   11122346889999997   444444432    2  


Q ss_pred             --CcEEEEeCCCc------c--E-Eeecc-cCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc---
Q psy17902        212 --SNIKLWSSSLE------H--L-HTFTG-HKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR---  263 (454)
Q Consensus       212 --g~v~vw~~~~~------~--~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~---  263 (454)
                        +.|..|+....      .  + ..+.. .......|+|.|+|.++++.+.             .|.|.-++....   
T Consensus       103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~  182 (354)
T 3a9g_A          103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA  182 (354)
T ss_dssp             EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred             cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence              56777776432      1  1 11221 1123467999999987776432             245666665432   


Q ss_pred             ------eeEEEeeccCCceeEEEeec-CCCEEEEeeCCC---cEEEeeccCCe------------------EE-EE-ccc
Q psy17902        264 ------AYVETLFGHQSAITSLDILA-KNRVISSGGTDK---SVRVWKIQEES------------------QL-VF-NGH  313 (454)
Q Consensus       264 ------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~------------------~~-~~-~~~  313 (454)
                            ..+. ..++.. ...++|+| ++.++++-...+   .|.+..  .+.                  .. .+ ..+
T Consensus       183 ~npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~  258 (354)
T 3a9g_A          183 DNPFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSET  258 (354)
T ss_dssp             TSSSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred             CCCCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence                  1121 124443 46899999 566555432221   132221  111                  11 22 122


Q ss_pred             cCCeEEEEe--------cCCCEEEEEeCCCCEEEEecCCCccce-eeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        314 SRGIDMTRR--------VNDQQFITCGEDGTLSLWSILKKVPTH-TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       314 ~~~i~~~~~--------~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      .. ...+.+        ..+.++++....+.|...++.....+. .......      ....+..+++.|+|.+.++..
T Consensus       259 ~a-p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~------~~~rp~~v~~~pDG~lyv~~~  330 (354)
T 3a9g_A          259 WA-PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN------VFGRLRDVVIDDDGGILISTS  330 (354)
T ss_dssp             CC-EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT------TSCCEEEEEECTTSCEEEEEC
T ss_pred             cC-CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC------CCCCeeEEEECCCCcEEEEEe
Confidence            22 333333        234455555566778888876532121 1111111      123488999999998666553

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.88  E-value=0.038  Score=57.90  Aligned_cols=275  Identities=12%  Similarity=0.089  Sum_probs=147.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC------CcEEEEecC-CCcEE
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN------NELVASGDN-NSNIK  215 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~-dg~v~  215 (454)
                      ..|.+.+.+.  .+++.++ ++.+.++.++.+........     .-...|.|+++.+.      +.++++|.. |++|+
T Consensus       514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~-----~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~  585 (1158)
T 3ei3_A          514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHT-----EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISAR  585 (1158)
T ss_dssp             CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEE-----ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEE
T ss_pred             CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeeccc-----CCCCceEEEEeecCCCCcccccEEEEEECCCCEEE
Confidence            4576666654  4666665 67888888775432211110     12347999999863      479999997 99999


Q ss_pred             EEeCC-CccEEeecc-cCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeC--CCceeEE---EeeccCCceeEEEeecCCC
Q psy17902        216 LWSSS-LEHLHTFTG-HKAPITGLAIS--FECDTLYSSSNDRSIKVWNI--EDRAYVE---TLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       216 vw~~~-~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~--~~~~~~~---~~~~~~~~v~~~~~~~~~~  286 (454)
                      |+++. ...+....- ......++.+.  ....+|..|-.||.+..+.+  .++....   .+.| ..++.-..+...+.
T Consensus       586 I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~  664 (1158)
T 3ei3_A          586 ILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLST  664 (1158)
T ss_dssp             EEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSC
T ss_pred             EEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCc
Confidence            99993 333332211 11234444443  23457889999998766554  3444332   1223 34554444443443


Q ss_pred             EEEEeeCCCcEEEeeccCCeEEEEccccCCeE-EEEecC---CCEEEEEeCCCCEEEEecCCCcc--ceeeecccCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGID-MTRRVN---DQQFITCGEDGTLSLWSILKKVP--THTIPVAHGYDSS  360 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~  360 (454)
                      .-+.+..+.-..+|.-.. ......-....+. ...|+.   .+-++.. .++.++|..+.....  +.+++..      
T Consensus       665 ~~V~a~s~rp~liy~~~~-~l~~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~------  736 (1158)
T 3ei3_A          665 TNVFACSDRPTVIYSSNH-KLVFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLY------  736 (1158)
T ss_dssp             EEEEEESSSCEEEEESSS-SEEEEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEECS------
T ss_pred             eeEEEECCCCEEEEEcCC-ceEEeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeCC------
Confidence            222223344444554332 2222222222232 233332   2334433 355699988755432  3333332      


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCC-------------------------------------------------CcEEEE
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYD-------------------------------------------------GCVKLW  391 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~d-------------------------------------------------g~v~iw  391 (454)
                          ..+..++++|..+.++++..+                                                 +.|++.
T Consensus       737 ----~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~li  812 (1158)
T 3ei3_A          737 ----ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLII  812 (1158)
T ss_dssp             ----SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEE
T ss_pred             ----CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEE
Confidence                238889999887755443311                                                 246777


Q ss_pred             EcCCCceeeEeccCCCceeeeEEE---EcCC-CCEEEEEec---------CCCceeeeeee
Q psy17902        392 KITPKRTLEFLQDIPLSGVINSLV---FTSD-HKHLVAGIG---------TEHRFGRWKTI  439 (454)
Q Consensus       392 d~~~~~~~~~~~~~~~~~~v~~l~---~s~d-~~~l~~~~~---------~d~~i~~W~~~  439 (454)
                      |-.+.+.+..+... ....+.+++   |..+ ..+|++|++         ..|+|++++..
T Consensus       813 dp~t~~~i~~~~l~-~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~  872 (1158)
T 3ei3_A          813 DQHTFEVLHAHQFL-QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS  872 (1158)
T ss_dssp             ETTTCCEEEEEECC-TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred             eCCCCeEEEEEeCC-CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence            77666666555432 233444444   4333 478888874         24666666665

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.85  E-value=0.012  Score=51.80  Aligned_cols=214  Identities=10%  Similarity=0.125  Sum_probs=107.7

Q ss_pred             CcEEEEecC--CCcEEEEeCCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCceeEEEeecc
Q psy17902        202 NELVASGDN--NSNIKLWSSSLEHLHTFT---GHKAPITGLAISFECDTLYSSSND----RSIKVWNIEDRAYVETLFGH  272 (454)
Q Consensus       202 ~~~l~~~~~--dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~  272 (454)
                      +.+++.|+.  ...+.+||.....-..+.   .......++.  .++..++.|+.+    ..+.+||+.+.+....-...
T Consensus        12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p   89 (306)
T 3ii7_A           12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP   89 (306)
T ss_dssp             CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred             ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence            345556654  357888988443322221   1111222222  256677777754    56889999887543221111


Q ss_pred             CCce-eEEEeecCCCEEEEeeCC------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeC---------C
Q psy17902        273 QSAI-TSLDILAKNRVISSGGTD------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGE---------D  334 (454)
Q Consensus       273 ~~~v-~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~---------d  334 (454)
                      .... .+++. -++.+++.|+.+      ..+.+||+.+..-........  .-..+...++..++.|+.         -
T Consensus        90 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~  168 (306)
T 3ii7_A           90 TPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVL  168 (306)
T ss_dssp             SCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEEC
T ss_pred             ccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccccc
Confidence            1111 12222 266777777765      468899998876553322211  112233345666666653         3


Q ss_pred             CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCCce
Q psy17902        335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPLSG  409 (454)
Q Consensus       335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~  409 (454)
                      ..+.+||+.+..-...-.....        ..-.++... ++.+++.|+.+     ..+.+||+.+.. ...+...+...
T Consensus       169 ~~~~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r  238 (306)
T 3ii7_A          169 NSCEVYDPATETWTELCPMIEA--------RKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKG  238 (306)
T ss_dssp             CCEEEEETTTTEEEEECCCSSC--------CBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE-EEECCCCSCCB
T ss_pred             ceEEEeCCCCCeEEECCCccch--------hhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCc
Confidence            4588999877642222111110        001112222 66777777754     358999988763 33333322222


Q ss_pred             eeeEEEEcCCCCEEEEEecCC
Q psy17902        410 VINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       410 ~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      .-.+++.. +++.++.| |.+
T Consensus       239 ~~~~~~~~-~~~i~v~G-G~~  257 (306)
T 3ii7_A          239 VTVKCAAV-GSIVYVLA-GFQ  257 (306)
T ss_dssp             SCCEEEEE-TTEEEEEE-CBC
T ss_pred             cceeEEEE-CCEEEEEe-CcC
Confidence            22222222 56666666 543

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.84  E-value=0.0017  Score=67.42  Aligned_cols=227  Identities=11%  Similarity=0.144  Sum_probs=135.9

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFE  242 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~  242 (454)
                      ..|.|.|+.++..+...+.         ..-+.-.+|..+.||.-. ..++.|+|+ ....+..+.- +.+|.-=.|-..
T Consensus        48 ~~vvIidl~~~~~~~rrpi---------~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~  116 (1630)
T 1xi4_A           48 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL  116 (1630)
T ss_pred             ceEEEEECCCCCCcccccc---------cchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC
Confidence            4899999988765533322         222344677777766654 679999999 4444444443 345554556533


Q ss_pred             CCEEEEEeCCCcEEEEeCCCc-eeEEEeecc----CCceeEEEeecCCCEEEEee-------CCCcEEEeeccCCeEEEE
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGH----QSAITSLDILAKNRVISSGG-------TDKSVRVWKIQEESQLVF  310 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~  310 (454)
                       +.|+..+ +..|+.|++... .++..+..|    ...|..-..+++.++++..|       -.|.+.+|+...+....+
T Consensus       117 -~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~i  194 (1630)
T 1xi4_A          117 -NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI  194 (1630)
T ss_pred             -CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhh
Confidence             3455444 356999999642 333333333    45576777778888776543       357889999988777677


Q ss_pred             ccccCCeEEEEecC----CCEEEEEe---CCCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        311 NGHSRGIDMTRRVN----DQQFITCG---EDGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       311 ~~~~~~i~~~~~~~----~~~l~~~~---~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      .+|.........+.    ...|..+.   ..+.++|.++...   .+........-.-..........++..++.-.++.
T Consensus       195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy  274 (1630)
T 1xi4_A          195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF  274 (1630)
T ss_pred             hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence            77766554333321    22232222   2378999888543   11111110000000111234466788888878888


Q ss_pred             EecCCCcEEEEEcCCCceeeEec
Q psy17902        381 SGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      .-+.-|.|++||+.++.++..-+
T Consensus       275 ~itk~G~~~~~d~~t~~~i~~~r  297 (1630)
T 1xi4_A          275 LITKYGYIHLYDLETGTCIYMNR  297 (1630)
T ss_pred             EEecCceEEEEecccchhhhhcc
Confidence            88999999999999997765444

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.79  E-value=0.0067  Score=53.30  Aligned_cols=214  Identities=13%  Similarity=0.149  Sum_probs=105.8

Q ss_pred             CcEEEEecCC----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEEe
Q psy17902        202 NELVASGDNN----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVETL  269 (454)
Q Consensus       202 ~~~l~~~~~d----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~  269 (454)
                      +.+++.|+.+    ..+.+||+....-..+..   ....- +++. .++..++.|+.+     ..+.+||+.+.+....-
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~   93 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA   93 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence            4455566543    357788874433322211   11111 2222 256677777754     35889998876543221


Q ss_pred             --eccCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeC-------
Q psy17902        270 --FGHQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGE-------  333 (454)
Q Consensus       270 --~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~-------  333 (454)
                        ...... .+++. -++.+++.|+.++     .+.+||+.+..-........+  -..+...++..++.|+.       
T Consensus        94 ~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~  171 (302)
T 2xn4_A           94 NMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQC  171 (302)
T ss_dssp             CCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEE
T ss_pred             CCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcc
Confidence              111111 12222 2567777777553     578888887765543222111  12333345666666663       


Q ss_pred             CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCCc
Q psy17902        334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPLS  408 (454)
Q Consensus       334 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~  408 (454)
                      -..+.+||+.+..-...-.....      ... ...+.  -++.+++.|+.+     ..+.+||+.+.. ...+...+..
T Consensus       172 ~~~~~~yd~~~~~W~~~~~~p~~------r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~  241 (302)
T 2xn4_A          172 LSTVECYNATTNEWTYIAEMSTR------RSG-AGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADMNMC  241 (302)
T ss_dssp             CCCEEEEETTTTEEEEECCCSSC------CBS-CEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTE-EEEECCCSSC
T ss_pred             ccEEEEEeCCCCcEEECCCCccc------ccc-ccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCC-EeeCCCCCCc
Confidence            24588899876543222111110      011 12222  267778888764     368999988763 3333332222


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCC
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~  431 (454)
                      ..-.+++. -+++.++.| |.++
T Consensus       242 r~~~~~~~-~~~~i~v~G-G~~~  262 (302)
T 2xn4_A          242 RRNAGVCA-VNGLLYVVG-GDDG  262 (302)
T ss_dssp             CBSCEEEE-ETTEEEEEC-CBCS
T ss_pred             cccCeEEE-ECCEEEEEC-CcCC
Confidence            11122222 255555555 5443

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.77  E-value=0.0079  Score=53.07  Aligned_cols=226  Identities=11%  Similarity=0.117  Sum_probs=116.4

Q ss_pred             CCCCEEEEEeCC----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----C-----CcEEEEe
Q psy17902        152 SDSKHVYSACKD----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----N-----SNIKLWS  218 (454)
Q Consensus       152 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~v~vw~  218 (454)
                      -++.+++.|+.+    ..+.+||..+..-............|     +++. -++.+++.|+.    +     ..+.+||
T Consensus        23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-----~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d   96 (308)
T 1zgk_A           23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-----AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYN   96 (308)
T ss_dssp             CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-----EEEE-ETTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred             CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-----eEEE-ECCEEEEECCCcCCCCCCeecceEEEEC
Confidence            355677777642    36888998776543322111110111     2222 26677777765    2     4688888


Q ss_pred             CCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEE--eeccCCceeEEEeecCCCEE
Q psy17902        219 SSLEHLHTFT---GHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVET--LFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       219 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l  288 (454)
                      +....-..+.   .......++.+  ++..++.|+.+     ..+.+||+.+.+....  +...... .+++.. ++.++
T Consensus        97 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iy  172 (308)
T 1zgk_A           97 PMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG-VGVAVL-NRLLY  172 (308)
T ss_dssp             TTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEE
T ss_pred             CCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc-eEEEEE-CCEEE
Confidence            8443333222   11112222222  56677776643     3688999887654322  1111111 122222 56777


Q ss_pred             EEeeCC-----CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccC
Q psy17902        289 SSGGTD-----KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       289 ~~~~~d-----g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      +.|+.+     ..+.+||+.+..-........  .-..+...++..++.|+.+     ..+.+||+.+..-...-.....
T Consensus       173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~  252 (308)
T 1zgk_A          173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR  252 (308)
T ss_dssp             EECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred             EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence            777754     458899988876553322111  1122333466677777654     5689999877532221111110


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK  396 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~  396 (454)
                             ......+.  -++.+++.|+.+     ..|.+||+.+.
T Consensus       253 -------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~  288 (308)
T 1zgk_A          253 -------RSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD  288 (308)
T ss_dssp             -------CBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             -------ccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence                   00112222  266777887754     35788888765

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.63  E-value=0.024  Score=50.03  Aligned_cols=182  Identities=10%  Similarity=0.051  Sum_probs=93.4

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-----C------CcEEEEeCCCccE
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-----N------SNIKLWSSSLEHL  224 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------g~v~vw~~~~~~~  224 (454)
                      +++.|+  ..+.+||..+..-.. ....    .........+...++.+++.|+.     .      ..+.+||.....-
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~-~~~~----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W   79 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYC-ASLS----SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW   79 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEE-EECC----CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred             EEEEcC--CceEEECCCCCeEec-CCCC----CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence            344555  578899988766332 1110    11112222333457777777773     1      1267788744333


Q ss_pred             EeecccCCCe--EEEEEcCCCCEEEEEeCC--------CcEEEEeCCCceeEEEeeccCCc-eeEEEeecCCCEEEEeeC
Q psy17902        225 HTFTGHKAPI--TGLAISFECDTLYSSSND--------RSIKVWNIEDRAYVETLFGHQSA-ITSLDILAKNRVISSGGT  293 (454)
Q Consensus       225 ~~~~~~~~~v--~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~  293 (454)
                      ..+.....+-  .+++.. ++..++.|+.+        ..+.+||+.+.+....-...... -.+++. -++.+++.|+.
T Consensus        80 ~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~  157 (315)
T 4asc_A           80 LGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGK  157 (315)
T ss_dssp             EECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCB
T ss_pred             EECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCC
Confidence            3322111111  112222 56666777632        45889999876533211111111 112222 35677777776


Q ss_pred             -C-----CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCCC-----CEEEEecCCCc
Q psy17902        294 -D-----KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGEDG-----TLSLWSILKKV  346 (454)
Q Consensus       294 -d-----g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~  346 (454)
                       +     ..+.+||+.+..-........  ....+...++..++.|+.++     .+.+||+.+..
T Consensus       158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~  223 (315)
T 4asc_A          158 GSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK  223 (315)
T ss_dssp             CTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred             CCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence             2     468999998876553332211  11233344667777777554     47888887653

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.62  E-value=0.071  Score=53.58  Aligned_cols=282  Identities=11%  Similarity=0.068  Sum_probs=152.5

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      ...|.++....++.+.+ |+.. -|..++..+..... +............|.++...+++..|..|+. +-+..++...
T Consensus       145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~  220 (758)
T 3ott_A          145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST  220 (758)
T ss_dssp             CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred             CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence            34688888887776554 5554 47778876654321 1111100012235888888877765555654 4578888754


Q ss_pred             ccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-------ccCCceeEEEeecCCCEEEEeeC
Q psy17902        222 EHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-------GHQSAITSLDILAKNRVISSGGT  293 (454)
Q Consensus       222 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~  293 (454)
                      ..+..+. .....|.++....++. |..|+.+| +.+++..++.......       -....|.++....+|.+- .|+.
T Consensus       221 ~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~  297 (758)
T 3ott_A          221 GQIKQTEAFHNNSIKSLALDGNGD-LLAGTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTD  297 (758)
T ss_dssp             TEEEEEEEEEEEEEEEEEECTTCC-EEEEETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEE-EEES
T ss_pred             CeEEeccCCCCCeEEEEEEcCCCC-EEEEeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeC
Confidence            4433322 1234578887776665 55556554 8889887655432211       122458888887777644 4555


Q ss_pred             CCcEEEeeccCCeEE-EEc-----cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeeecccCCCCCCCCCC
Q psy17902        294 DKSVRVWKIQEESQL-VFN-----GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       294 dg~i~i~d~~~~~~~-~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~  365 (454)
                      .| +.++.....-.. ...     .....+.++.....+.|..|+.+| +..++..++.  ....+.....  .......
T Consensus       298 ~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~  373 (758)
T 3ott_A          298 YG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDK--TYPLSHN  373 (758)
T ss_dssp             SS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCS--SSCCSCS
T ss_pred             Cc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCc--CCCCCCC
Confidence            56 554433221111 111     012346666666666777777655 6666655432  1112211100  0011234


Q ss_pred             cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec-cCC---CceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-DIP---LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~---~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .|.++.-.++|++.+ |+. +-|..|+..+++...... ...   ....|.++...++|...+.+  ..+.|.+++.
T Consensus       374 ~v~~i~~d~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT--~~~Gl~~~~~  446 (758)
T 3ott_A          374 RIRHIYEDKEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST--CLGGIFVVDK  446 (758)
T ss_dssp             CEEEEEECTTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE--SSSCEEEEEH
T ss_pred             ceEEEEECCCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE--CCCceEEEcc
Confidence            589998888887544 443 459999987764332211 100   12458888888887655543  3445666653

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=97.60  E-value=0.035  Score=49.41  Aligned_cols=255  Identities=13%  Similarity=0.069  Sum_probs=128.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC---CcEEEEe---cCCCcE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN---NELVASG---DNNSNI  214 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~---~~dg~v  214 (454)
                      .-.....|+|.|+|.++++--..|.|++++..++.....................|+++|+   +.+|++.   ..++.|
T Consensus        30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v  109 (347)
T 3das_A           30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI  109 (347)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred             CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence            4455799999999987777655899999986655432111111111123457899999995   3344332   234455


Q ss_pred             EEEeCCC------c---c--EE-eec-ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc-----
Q psy17902        215 KLWSSSL------E---H--LH-TFT-GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR-----  263 (454)
Q Consensus       215 ~vw~~~~------~---~--~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~-----  263 (454)
                      .-|.+..      .   .  +. .+. ........|.|.|+|.++++.+.             .|.|.-.+....     
T Consensus       110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n  189 (347)
T 3das_A          110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN  189 (347)
T ss_dssp             EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred             EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence            5565532      1   1  11 121 11123457999999987777543             345555554421     


Q ss_pred             ----eeEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEE
Q psy17902        264 ----AYVETLFGHQSAITSLDILAKNRVISSG-GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLS  338 (454)
Q Consensus       264 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~  338 (454)
                          ..+.. .+|.. ...++|+|++.+.++- +.++.-.|.-+..+...   +         |+.    +.+..+    
T Consensus       190 Pf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny---G---------wP~----~~g~~~----  247 (347)
T 3das_A          190 PFPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY---G---------WPE----AEGKGG----  247 (347)
T ss_dssp             SSTTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC---C---------TTT----CCSSCC----
T ss_pred             CCCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEe---c---------CCc----ccCCCC----
Confidence                11111 24443 3567777766544432 11221111111111000   0         000    000000    


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----eeEeccCCCceeeeEE
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LEFLQDIPLSGVINSL  414 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~v~~l  414 (454)
                        ......++..+...         ......|+|. +|.+++..-..+.|....+.....    ...+..  ..+.+.++
T Consensus       248 --~~~~~~P~~~~~~~---------~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~--~~gR~~dv  313 (347)
T 3das_A          248 --GSGFHDPVAQWSTD---------EASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG--EYGRLRTV  313 (347)
T ss_dssp             --CTTCCCCSEEECTT---------TCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT--TSSCEEEE
T ss_pred             --CccccCCcEecCCC---------CCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecC--CCCCccEE
Confidence              00111222222211         1126778876 466666666666777777765432    222332  34679999


Q ss_pred             EEcCCCCEEEEEecCCC
Q psy17902        415 VFTSDHKHLVAGIGTEH  431 (454)
Q Consensus       415 ~~s~d~~~l~~~~~~d~  431 (454)
                      +..|||..+++....||
T Consensus       314 ~~~pDG~lyv~td~~~g  330 (347)
T 3das_A          314 APAGGDKLWLVTSNTDG  330 (347)
T ss_dssp             EEEETTEEEEEECTTSS
T ss_pred             EECCCCcEEEEEcCCCC
Confidence            99999988777744454

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.59  E-value=0.016  Score=51.12  Aligned_cols=214  Identities=10%  Similarity=0.129  Sum_probs=106.3

Q ss_pred             CCcEEEEecCC----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeC----C-----CcEEEEeCCCce
Q psy17902        201 NNELVASGDNN----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSN----D-----RSIKVWNIEDRA  264 (454)
Q Consensus       201 ~~~~l~~~~~d----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~~  264 (454)
                      ++.+++.|+.+    ..+.+||.....-..+..   ..... +++.. ++.+++.|+.    +     ..+.+||+.+.+
T Consensus        24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~  101 (308)
T 1zgk_A           24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ  101 (308)
T ss_dssp             CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred             CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence            55666666632    367888874433332211   11111 22222 5666777665    2     468899988765


Q ss_pred             eEEE--eeccCCceeEEEeecCCCEEEEeeCC-----CcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-
Q psy17902        265 YVET--LFGHQSAITSLDILAKNRVISSGGTD-----KSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-  334 (454)
Q Consensus       265 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-  334 (454)
                      ....  +....... +++.. ++.+++.|+.+     ..+.+||+.+..-.........  -..+...++..++.|+.+ 
T Consensus       102 W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~  179 (308)
T 1zgk_A          102 WSPCAPMSVPRNRI-GVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG  179 (308)
T ss_dssp             EEECCCCSSCCBTC-EEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred             EeECCCCCcCcccc-EEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCC
Confidence            4322  11111111 22222 56777777644     3688899888765533221111  122333366667777654 


Q ss_pred             ----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccC
Q psy17902        335 ----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDI  405 (454)
Q Consensus       335 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~  405 (454)
                          ..+.+||+.+..-...-.....       ......+.+  ++.+++.|+.+     ..+.+||+.+.. ...+...
T Consensus       180 ~~~~~~~~~yd~~~~~W~~~~~~p~~-------r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~  249 (308)
T 1zgk_A          180 TNRLNSAECYYPERNEWRMITAMNTI-------RSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET-WTFVAPM  249 (308)
T ss_dssp             SCBCCCEEEEETTTTEEEECCCCSSC-------CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE-EEECCCC
T ss_pred             CCcCceEEEEeCCCCeEeeCCCCCCc-------cccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc-EEECCCC
Confidence                4688899876532221111110       011122222  67777888764     469999998763 3333332


Q ss_pred             CCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        406 PLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       406 ~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      +....-.+++.. +++.++.| |.+
T Consensus       250 p~~r~~~~~~~~-~~~i~v~G-G~~  272 (308)
T 1zgk_A          250 KHRRSALGITVH-QGRIYVLG-GYD  272 (308)
T ss_dssp             SSCCBSCEEEEE-TTEEEEEC-CBC
T ss_pred             CCCccceEEEEE-CCEEEEEc-CcC
Confidence            222222223332 45555555 544

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=97.54  E-value=0.018  Score=51.94  Aligned_cols=235  Identities=8%  Similarity=0.008  Sum_probs=112.0

Q ss_pred             CCCEEEEEeCC-CeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-C---------CcEEEEeC
Q psy17902        153 DSKHVYSACKD-GIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-N---------SNIKLWSS  219 (454)
Q Consensus       153 ~~~~l~~~~~d-g~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------g~v~vw~~  219 (454)
                      ++.+++.|+.+ ..+.+||+.+  ..-.........  .. ... +++. -++.+++.|+. +         ..+.+||+
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~--~R-~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~   93 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG--PR-DQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNP   93 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC--CC-BSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC--cC-ccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence            55666666543 4788888864  221111111100  01 111 1222 25677777765 2         46888888


Q ss_pred             CCccEEeeccc----CCCeEEEEEcCCCCEEEEEeCC---------------------------------------CcEE
Q psy17902        220 SLEHLHTFTGH----KAPITGLAISFECDTLYSSSND---------------------------------------RSIK  256 (454)
Q Consensus       220 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~  256 (454)
                      ....-..+...    .....++.  .++.+++.|+.+                                       ..+.
T Consensus        94 ~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  171 (357)
T 2uvk_A           94 KTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL  171 (357)
T ss_dssp             TTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred             CCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence            44332222211    11122222  467777888754                                       4789


Q ss_pred             EEeCCCceeEEEeecc-CCce-eEEEeecCCCEEEEeeC------CCcEEEeec--cCCeEEEEccc--cCC--eEEEEe
Q psy17902        257 VWNIEDRAYVETLFGH-QSAI-TSLDILAKNRVISSGGT------DKSVRVWKI--QEESQLVFNGH--SRG--IDMTRR  322 (454)
Q Consensus       257 iwd~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~~~~~------dg~i~i~d~--~~~~~~~~~~~--~~~--i~~~~~  322 (454)
                      +||+.+.+....-... ...- .+++.. ++.+++.|+.      ...+.+||+  .+..-......  ...  -..+..
T Consensus       172 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~  250 (357)
T 2uvk_A          172 SFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI  250 (357)
T ss_dssp             EEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred             EEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence            9999876543221111 1111 233333 5667777664      345777876  44443332221  111  122444


Q ss_pred             cCCCEEEEEeCC----------------------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        323 VNDQQFITCGED----------------------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       323 ~~~~~l~~~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      .++..++.|+.+                      ..+.+||+.+..-...-......      .. -.+  ...++.+++
T Consensus       251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~-~~~--~~~~~~i~v  321 (357)
T 2uvk_A          251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR------AY-GVS--LPWNNSLLI  321 (357)
T ss_dssp             ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC------BS-SEE--EEETTEEEE
T ss_pred             ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc------cc-cee--EEeCCEEEE
Confidence            566677777632                      25778998765432221111110      00 122  234677888


Q ss_pred             EecCCC------cEEEEEcCCCceeeEecc
Q psy17902        381 SGSYDG------CVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       381 ~~~~dg------~v~iwd~~~~~~~~~~~~  404 (454)
                      .|+.++      .|.++++.+++.+.....
T Consensus       322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~  351 (357)
T 2uvk_A          322 IGGETAGGKAVTDSVLITVKDNKVTVQNLE  351 (357)
T ss_dssp             EEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred             EeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence            887653      366668887766655443

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=97.49  E-value=0.039  Score=48.72  Aligned_cols=210  Identities=10%  Similarity=0.092  Sum_probs=104.6

Q ss_pred             EEEEecCCCcEEEEeCCCccE--EeecccCCCeEEEEEcCCCCEEEEEeC-----C------CcEEEEeCCCceeEEEee
Q psy17902        204 LVASGDNNSNIKLWSSSLEHL--HTFTGHKAPITGLAISFECDTLYSSSN-----D------RSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------g~i~iwd~~~~~~~~~~~  270 (454)
                      +++.|+  ..+.+||.....-  ..+..........+...++..++.|+.     .      ..+.+||+.+.+... +.
T Consensus         7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~   83 (315)
T 4asc_A            7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP   83 (315)
T ss_dssp             EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred             EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence            445555  5788999843332  122111122223333457778888873     1      127788988775432 21


Q ss_pred             ccCCc--eeEEEeecCCCEEEEeeCC--------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeC-----
Q psy17902        271 GHQSA--ITSLDILAKNRVISSGGTD--------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGE-----  333 (454)
Q Consensus       271 ~~~~~--v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~-----  333 (454)
                      ....+  -.+++.. ++.+++.|+.+        ..+.+||+.+..-........  .-..+...++..++.|+.     
T Consensus        84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~  162 (315)
T 4asc_A           84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK  162 (315)
T ss_dssp             CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred             CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence            11111  1122222 56677777743        458899998876543322111  112333456667777775     


Q ss_pred             -CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCCceeeEeccCCC
Q psy17902        334 -DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPKRTLEFLQDIPL  407 (454)
Q Consensus       334 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~  407 (454)
                       -..+.+||+.+..-...-.....       .....++.  -++.+++.|+.++     .+.+||+.+.. ...+...+.
T Consensus       163 ~~~~~~~yd~~~~~W~~~~~~p~~-------r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~  232 (315)
T 4asc_A          163 CLNKMCVYDPKKFEWKELAPMQTA-------RSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQ  232 (315)
T ss_dssp             BCCCEEEEETTTTEEEECCCCSSC-------CBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSS
T ss_pred             ccceEEEEeCCCCeEEECCCCCCc-------hhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCe-EEECCCCCC
Confidence             24688999876532221111110       00012222  2667777777654     48889987763 333333222


Q ss_pred             ceeeeEEEEcCCCCEEEEEecC
Q psy17902        408 SGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       408 ~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      ...-.+++.. +++.++.| |.
T Consensus       233 ~r~~~~~~~~-~~~l~v~G-G~  252 (315)
T 4asc_A          233 ERSSLSLVSL-VGTLYAIG-GF  252 (315)
T ss_dssp             CCBSCEEEEE-TTEEEEEE-EE
T ss_pred             cccceeEEEE-CCEEEEEC-Cc
Confidence            2222223332 45555655 44

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.49  E-value=0.032  Score=49.87  Aligned_cols=155  Identities=10%  Similarity=0.128  Sum_probs=87.5

Q ss_pred             eeEEEeecCCCEEEEe------------eCCCcEEEeeccC--CeEE--EEcc--------ccCCeEEEEecCCC-EEEE
Q psy17902        276 ITSLDILAKNRVISSG------------GTDKSVRVWKIQE--ESQL--VFNG--------HSRGIDMTRRVNDQ-QFIT  330 (454)
Q Consensus       276 v~~~~~~~~~~~l~~~------------~~dg~i~i~d~~~--~~~~--~~~~--------~~~~i~~~~~~~~~-~l~~  330 (454)
                      .-.+.+.|+|..++++            ..+|.|.++|+.+  .+..  .+.+        +...+......++. +|++
T Consensus        52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V  131 (355)
T 3sre_A           52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV  131 (355)
T ss_dssp             CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred             cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence            4556667766444443            1689999999873  2322  3322        22222222211333 3444


Q ss_pred             E-eC--CCCEEEEecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCCEEEEecC-----------------CCcEE
Q psy17902        331 C-GE--DGTLSLWSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSDLVASGSY-----------------DGCVK  389 (454)
Q Consensus       331 ~-~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------------dg~v~  389 (454)
                      + ..  +.+|.+|++........+. ...+.     .-...+.+.+.++|.+.++...                 .|.|.
T Consensus       132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~-----~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy  206 (355)
T 3sre_A          132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK-----LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT  206 (355)
T ss_dssp             EECSTTCCEEEEEEEETTTTEEEEEEEECCT-----TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred             EECCCCCCeEEEEEEECCCCEEEEEeccccC-----CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence            4 33  5678888775542222211 11111     2234899999999998777541                 23444


Q ss_pred             EEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        390 LWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       390 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      .++  .++ +..+..  .-...+.++||||++.|+++-+..++|.+|+...
T Consensus       207 r~d--~~~-~~~~~~--~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~  252 (355)
T 3sre_A          207 YYS--PND-VRVVAE--GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA  252 (355)
T ss_dssp             EEC--TTC-CEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred             EEE--CCe-EEEeec--CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence            444  343 222221  2345789999999999999877788999998764

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.43  E-value=0.056  Score=47.76  Aligned_cols=223  Identities=8%  Similarity=0.019  Sum_probs=110.0

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----CC-------cEEEEeCCCccE
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----NS-------NIKLWSSSLEHL  224 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~v~vw~~~~~~~  224 (454)
                      +++.|+.  .+.+||..+.+-.. ....    .........+...++.+++.|+.    ++       .+.+||.....-
T Consensus        18 i~~~GG~--~~~~yd~~~~~W~~-~~~~----~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W   90 (318)
T 2woz_A           18 ILLVNDT--AAVAYDPMENECYL-TALA----EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW   90 (318)
T ss_dssp             EEEECSS--EEEEEETTTTEEEE-EEEC----TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred             hhhcccc--ceEEECCCCCceec-ccCC----ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence            3444443  47888888765432 1110    00111222233457778888873    12       167788744333


Q ss_pred             Eeecc---cCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEeCCCceeEEEeeccCCce-eEEEeecCCCEEEEeeC
Q psy17902        225 HTFTG---HKAPITGLAISFECDTLYSSSND-------RSIKVWNIEDRAYVETLFGHQSAI-TSLDILAKNRVISSGGT  293 (454)
Q Consensus       225 ~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~  293 (454)
                      ..+..   .......+.+  ++..++.|+.+       ..+.+||+.+.+....-....... .+++. .++.+++.|+.
T Consensus        91 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~  167 (318)
T 2woz_A           91 VGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGK  167 (318)
T ss_dssp             EECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCE
T ss_pred             EECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCC
Confidence            33221   1111122222  56677777754       358889988765432211111111 12222 36677777764


Q ss_pred             ------CCcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCC
Q psy17902        294 ------DKSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       294 ------dg~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                            -..+.+||+.+..-........+  ...+...++..++.|+.+     ..+.+||+.+..-...-.....    
T Consensus       168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----  243 (318)
T 2woz_A          168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE----  243 (318)
T ss_dssp             ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSC----
T ss_pred             CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCc----
Confidence                  23589999988765543322211  123334466677777643     3467888876532221111110    


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCC--------------CcEEEEEcCCCc
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYD--------------GCVKLWKITPKR  397 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~d--------------g~v~iwd~~~~~  397 (454)
                         ......+  ..++.+++.|+.+              ..|.+||+.+.+
T Consensus       244 ---r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~  289 (318)
T 2woz_A          244 ---RSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE  289 (318)
T ss_dssp             ---CBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred             ---ccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence               0001222  2356777777754              357788887754

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=97.35  E-value=0.16  Score=51.10  Aligned_cols=264  Identities=12%  Similarity=0.117  Sum_probs=149.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL  221 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~  221 (454)
                      ...|.++....++ .|..|+.+| +..||..+.....  ..    ......|.++.. .++. |..|+.+ -|..++...
T Consensus        62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~--~~----~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~  130 (758)
T 3ott_A           62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ--PE----TDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQS  130 (758)
T ss_dssp             SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC--CS----CCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTT
T ss_pred             CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC--cc----cCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCC
Confidence            4568998877665 677777665 7889987654322  10    012235777654 3554 5555555 578888855


Q ss_pred             ccEEeec-----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-----cCCceeEEEeecCCCEEEEe
Q psy17902        222 EHLHTFT-----GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-----HQSAITSLDILAKNRVISSG  291 (454)
Q Consensus       222 ~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~  291 (454)
                      ..+..+.     .....|.++....++. |..|+..| |..++..++........     ....|.++...+++..|..|
T Consensus       131 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWig  208 (758)
T 3ott_A          131 RKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIG  208 (758)
T ss_dssp             CCEEEECHHHHCCSCSCEEEEEECTTCC-EEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred             CeEEEeccCCCCcCCCeEEEEEEcCCCC-EEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEE
Confidence            4444441     1234688888776665 44456555 78888877654321111     12248888887777765556


Q ss_pred             eCCCcEEEeeccCCeEEEEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        292 GTDKSVRVWKIQEESQLVFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      +. +-+..++..++....+.. ....|.++.....+.|..|+.+ -+.+++..+.... .+..... ....-....|.++
T Consensus       209 t~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~-~~~~~~~-~~~~l~~~~i~~i  284 (758)
T 3ott_A          209 TE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQ-HIIHDSR-NIQSLTNNIIWNI  284 (758)
T ss_dssp             EE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCE-EECCCTT-CTTSCSCSCEEEE
T ss_pred             EC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEE-EEEcCCC-CcCcCCcCeEEEE
Confidence            54 458888887765442221 2233555555556667777754 4888887665332 2211110 0011123459999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEcCCCceeeEec-----cCCCceeeeEEEEcCCCCEEEEE
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-----DIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ....+|.+-+ |+..| +.++....  ....+.     .......|.++.-.++|...+.+
T Consensus       285 ~~D~~g~lWi-GT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt  341 (758)
T 3ott_A          285 FADQEHNIWL-GTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG  341 (758)
T ss_dssp             EECTTCCEEE-EESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred             EEcCCCCEEE-EeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence            9888887443 44456 55543321  222111     01123468888888888766654

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.31  E-value=0.084  Score=47.17  Aligned_cols=194  Identities=12%  Similarity=0.128  Sum_probs=100.8

Q ss_pred             CeEEEEEcCCCCEEEEE------------eCCCcEEEEeCCCc--eeE-EEeec-----cCCceeEEEeec--CCC-EEE
Q psy17902        233 PITGLAISFECDTLYSS------------SNDRSIKVWNIEDR--AYV-ETLFG-----HQSAITSLDILA--KNR-VIS  289 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~------------~~dg~i~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~  289 (454)
                      ..-.+...|+|..++++            ..+|.|.++|+.+.  +.. ..+.+     .......|.+.+  ++. +|+
T Consensus        51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~  130 (355)
T 3sre_A           51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL  130 (355)
T ss_dssp             CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred             CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence            34455666665443333            26899999998732  221 12222     223567777766  343 343


Q ss_pred             Ee-eC--CCcEEEeeccCC--eEE---EEcccc-CCeEEEE-ecCCCEEEEEe-----------------CCCCEEEEec
Q psy17902        290 SG-GT--DKSVRVWKIQEE--SQL---VFNGHS-RGIDMTR-RVNDQQFITCG-----------------EDGTLSLWSI  342 (454)
Q Consensus       290 ~~-~~--dg~i~i~d~~~~--~~~---~~~~~~-~~i~~~~-~~~~~~l~~~~-----------------~dg~i~iwd~  342 (454)
                      ++ ..  +..|.+|++...  ...   .+.+.. ...+.+. .+++.++++..                 ..|.|..|+.
T Consensus       131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~  210 (355)
T 3sre_A          131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP  210 (355)
T ss_dssp             EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred             EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence            33 33  467788877653  222   222211 1223333 34444444432                 1244555554


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC-CC
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS-DH  420 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~  420 (454)
                        +. +..+....         ...+.++|+|+++.|+++ +..+.|..|++.....+.........+..-.+++.+ +|
T Consensus       211 --~~-~~~~~~~l---------~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G  278 (355)
T 3sre_A          211 --ND-VRVVAEGF---------DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTG  278 (355)
T ss_dssp             --TC-CEEEEEEE---------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTC
T ss_pred             --Ce-EEEeecCC---------cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCC
Confidence              22 22221111         127899999999866655 457889999986432222111111346678899999 59


Q ss_pred             CEEEEEecCCCceeeeee
Q psy17902        421 KHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~  438 (454)
                      .+.+++.-..++|..|+.
T Consensus       279 ~lwva~~~~g~~v~~~~P  296 (355)
T 3sre_A          279 DLWVGCHPNGMRIFFYDA  296 (355)
T ss_dssp             CEEEEEESCHHHHHSCCT
T ss_pred             cEEEEecCCceEEEEECC
Confidence            877766223345555543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.27  E-value=0.021  Score=51.62  Aligned_cols=145  Identities=12%  Similarity=0.138  Sum_probs=93.1

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc-------
Q psy17902        151 TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE-------  222 (454)
Q Consensus       151 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~-------  222 (454)
                      +.+|..|+++- ++.||.-++......+.+....  .-....|..+..+|+|++||..+. ..|.|..+. +.       
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~--~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~  104 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSR--HLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS  104 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTT--TCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCc--ccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence            34566666654 4788888877543332222110  002235778999999999999874 578888873 21       


Q ss_pred             -----cEEeecc------cCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCce--eEEEee---------ccCCcee
Q psy17902        223 -----HLHTFTG------HKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRA--YVETLF---------GHQSAIT  277 (454)
Q Consensus       223 -----~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~--~~~~~~---------~~~~~v~  277 (454)
                           ....+.-      ...+|..+.|+|-   +..|++-..|+.|++||+....  +. .+.         .....|.
T Consensus       105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~  183 (452)
T 3pbp_A          105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT  183 (452)
T ss_dssp             HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred             cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence                 0112221      2567999999994   5789999999999999997521  11 221         2235688


Q ss_pred             EEEeecCCCEEEE--eeCCCcEEEe
Q psy17902        278 SLDILAKNRVISS--GGTDKSVRVW  300 (454)
Q Consensus       278 ~~~~~~~~~~l~~--~~~dg~i~i~  300 (454)
                      +++|.+++-.|..  .+..|.|+-.
T Consensus       184 S~~Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          184 DLEFSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred             EEEEcCCCcEEEEEecCCCCCEEEE
Confidence            9999987755555  4477777654

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=97.27  E-value=0.12  Score=48.15  Aligned_cols=110  Identities=14%  Similarity=0.136  Sum_probs=61.9

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec--ccCCcccCCCCCCceEEEEEeCC---CcEEEEecC------
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC--SSPFVKTDRKSYPPILALAVANN---NELVASGDN------  210 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~------  210 (454)
                      -.....|+|.|+|+++++-...+.|++++..++....  .+...............|+|+|+   +.+|+++..      
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~  105 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS  105 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence            3457899999999877765444578888765444321  11111000113457889999995   444444432      


Q ss_pred             -------CCcEEEEeCCC--------ccEE-eec-ccCCCeEEEEEcCCCCEEEEEeC
Q psy17902        211 -------NSNIKLWSSSL--------EHLH-TFT-GHKAPITGLAISFECDTLYSSSN  251 (454)
Q Consensus       211 -------dg~v~vw~~~~--------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~  251 (454)
                             ...|.-|+.+.        +.+. .+. ........|+|.|+|.++++.+.
T Consensus       106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                   12455555421        1111 121 11234789999999987777553

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=97.25  E-value=0.015  Score=60.76  Aligned_cols=235  Identities=11%  Similarity=0.126  Sum_probs=139.8

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC--CccE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS--LEHL  224 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--~~~~  224 (454)
                      +.-.+|..+.||.-. ..++.|+|+++...+....+       ..+|.-=.|-.... |+..+ +..|.-|++.  ..++
T Consensus        70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-------~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~  139 (1630)
T 1xi4_A           70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPV  139 (1630)
T ss_pred             hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-------CCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccH
Confidence            344688888887765 68999999999887776653       23455555654443 44333 3689999993  4555


Q ss_pred             Eeeccc----CCCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCceeEEEeeccCCceeEEEee--cCC-CEEEE
Q psy17902        225 HTFTGH----KAPITGLAISFECDTLYSSS-------NDRSIKVWNIEDRAYVETLFGHQSAITSLDIL--AKN-RVISS  290 (454)
Q Consensus       225 ~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~  290 (454)
                      ..+..|    ...|..-..+++.+.++..|       -.|.+.+|+++.+. .+.+.||......+...  +.. .+++.
T Consensus       140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f  218 (1630)
T 1xi4_A          140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF  218 (1630)
T ss_pred             HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEE
Confidence            555444    45666777788888776543       35889999987543 34556676555444442  111 23322


Q ss_pred             eeC---CCcEEEeeccCC---e-EE-------EEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        291 GGT---DKSVRVWKIQEE---S-QL-------VFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       291 ~~~---dg~i~i~d~~~~---~-~~-------~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      +..   .+.++|.++...   . ..       .+..   ..-++..-.+..-+.+...+.-|.|.+||+.++.++..-..
T Consensus       219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri  298 (1630)
T 1xi4_A          219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI  298 (1630)
T ss_pred             EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc
Confidence            221   267888887543   1 11       1111   12234444455567788889999999999999988876654


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF  401 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~  401 (454)
                      ...         .|...+.+....-+++....|.|.-..+.....+..
T Consensus       299 s~~---------~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~y  337 (1630)
T 1xi4_A          299 SGE---------TIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY  337 (1630)
T ss_pred             cCC---------ceEEeccCCCCCceEEEcCCceEEEEEEccchhhhh
Confidence            322         133333333322333444667666666665544433

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=97.15  E-value=0.11  Score=45.41  Aligned_cols=196  Identities=11%  Similarity=0.058  Sum_probs=106.6

Q ss_pred             eCCCcEEEEec--CCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC--------------CcEEEEeCCC
Q psy17902        199 ANNNELVASGD--NNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND--------------RSIKVWNIED  262 (454)
Q Consensus       199 ~~~~~~l~~~~--~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~  262 (454)
                      +.++.+|+...  .++.|...+.++.....+....    +--+++++..|+-+...              ..|+..++..
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg   97 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG   97 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence            34566666553  2466777777666555554322    33557888888766542              4677778776


Q ss_pred             ceeEEEeeccCCceeEEEeecCCCEEEEee----CCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEe-CCCCE
Q psy17902        263 RAYVETLFGHQSAITSLDILAKNRVISSGG----TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCG-EDGTL  337 (454)
Q Consensus       263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i  337 (454)
                      ..... +..  ..  +..|+++++.|+-..    ....|+..++.......+..+.. . . +.+.++.|+-.+ ....|
T Consensus        98 ~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-~-~-~~~~g~~iy~t~~g~~~I  169 (302)
T 3s25_A           98 HGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-F-T-CNTSDRYFYYNNPKNGQL  169 (302)
T ss_dssp             CCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-C-C-SEEETTEEEEECTTTCCE
T ss_pred             CcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-e-E-eeEECCEEEEEeCCCceE
Confidence            65332 221  11  236677888877665    23455555665444433333322 1 1 133455555444 46788


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--CcEEEEEcCCCceeeEeccCCCceeeeEEE
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--GCVKLWKITPKRTLEFLQDIPLSGVINSLV  415 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~  415 (454)
                      .+.++..+.....+.   +.         .. ..++|++.+|+-....  ..|..-++.... ...+..    ..+  ..
T Consensus       170 y~~~l~g~~~~~l~~---~~---------~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~----~~~--~~  229 (302)
T 3s25_A          170 YRYDTASQSEALFYD---CN---------CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE----ANI--EH  229 (302)
T ss_dssp             EEEETTTTEEEEEEC---SC---------EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC----SCE--EE
T ss_pred             EEEECCCCCEEEEeC---CC---------cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC----CCc--ce
Confidence            888876654332221   10         22 3466888877765543  345555555443 333332    122  34


Q ss_pred             EcCCCCEEEEE
Q psy17902        416 FTSDHKHLVAG  426 (454)
Q Consensus       416 ~s~d~~~l~~~  426 (454)
                      |+|++.+|+.+
T Consensus       230 ~~~~g~~Iy~~  240 (302)
T 3s25_A          230 YNVYGSLIFYQ  240 (302)
T ss_dssp             EEEETTEEEEE
T ss_pred             EEECCCEEEEE
Confidence            78888888765

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.15  E-value=0.016  Score=51.43  Aligned_cols=142  Identities=11%  Similarity=0.111  Sum_probs=82.1

Q ss_pred             cEEEEecCCCcEEEEeC-CCccEEeeccc-CCCeEEEEEc--CCCCEEEEE--eCCCcEEEEeCCCceeEEEeec----c
Q psy17902        203 ELVASGDNNSNIKLWSS-SLEHLHTFTGH-KAPITGLAIS--FECDTLYSS--SNDRSIKVWNIEDRAYVETLFG----H  272 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~-~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~----~  272 (454)
                      .++++++.||.|.-+|. +++.+.++... ..++....-.  +.+..++.+  +.||.|..++..+|.....+..    .
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~   90 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS   90 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence            46888899999999998 77777777643 1222221100  112234444  5899999999998865544431    1


Q ss_pred             CCceeE---EEe-e----cCCCEEEEeeCCCcEEEeeccCCeEE-EEccccC-C------eEEEEe------cCCCEEEE
Q psy17902        273 QSAITS---LDI-L----AKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR-G------IDMTRR------VNDQQFIT  330 (454)
Q Consensus       273 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~-~------i~~~~~------~~~~~l~~  330 (454)
                      ..++..   ..+ .    ..+..+++|+.+|.+...|+.+++.+ .+..... .      ..|...      ..++.++.
T Consensus        91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i  170 (339)
T 2be1_A           91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI  170 (339)
T ss_dssp             TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred             ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence            222221   000 0    14567888999999999999999988 3332211 1      011111      12356777


Q ss_pred             EeCCCCEEEEecCCC
Q psy17902        331 CGEDGTLSLWSILKK  345 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~  345 (454)
                      +..+..+.+.+ +++
T Consensus       171 g~~~y~v~~~~-~sG  184 (339)
T 2be1_A          171 GKTIFELGIHS-YDG  184 (339)
T ss_dssp             EEEEEECEECC-TTS
T ss_pred             ecceEEEEEEC-CCC
Confidence            77777677666 344

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.004  Score=55.19  Aligned_cols=189  Identities=10%  Similarity=0.062  Sum_probs=101.0

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE---eCCCcEEEEe-cCCCcEEEEeC-CCccEEeecc
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV---ANNNELVASG-DNNSNIKLWSS-SLEHLHTFTG  229 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~-~~dg~v~vw~~-~~~~~~~~~~  229 (454)
                      .++++++.||.|.-+|..+++....+...     ...++....-   ..++..++.. +.||.|..++. ++.....+..
T Consensus        11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~   85 (339)
T 2be1_A           11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSI   85 (339)
T ss_dssp             EEEEEEETTSCEEEEETTTTEEEEEECGG-----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEH
T ss_pred             CEEEEEeCCCeEEEEECCCCcEEEEecCC-----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecc
Confidence            57889999999999999999888777642     0011111100   0123334343 57899988887 3422222211


Q ss_pred             ----cCCCeEE---EEE-----cCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC--Cc-----eeEEEee-----cCC
Q psy17902        230 ----HKAPITG---LAI-----SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ--SA-----ITSLDIL-----AKN  285 (454)
Q Consensus       230 ----~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~-----v~~~~~~-----~~~  285 (454)
                          ...++..   ...     ...+..+++|+.+|.+...|+.+|+.+..+....  ..     ..|....     ..+
T Consensus        86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~  165 (339)
T 2be1_A           86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE  165 (339)
T ss_dssp             HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred             ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence                1122221   000     0145688999999999999999999998875321  10     1111111     123


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE--EE---ccccCC--eE-EEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL--VF---NGHSRG--ID-MTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~--~~---~~~~~~--i~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      ..|+.+..+..+.+.+ +++..-  .+   ......  +. ......++.+++++.||.|.-+|..++..+.
T Consensus       166 ~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W  236 (339)
T 2be1_A          166 NMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW  236 (339)
T ss_dssp             CEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred             CeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence            5677777777777766 333311  11   000000  00 0000012334567888888888888877665

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=97.10  E-value=0.012  Score=47.96  Aligned_cols=178  Identities=10%  Similarity=-0.066  Sum_probs=92.9

Q ss_pred             CCEEEEEeCCCcEEEEeCCCce------eEEEeecc--CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcccc
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDRA------YVETLFGH--QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHS  314 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  314 (454)
                      ..+|++...| +|+.=......      ....+ +.  =..+..++|+|++.+.++  .+|.++-.+..+.......+..
T Consensus         4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~   79 (236)
T 1tl2_A            4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA   79 (236)
T ss_dssp             CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred             ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence            4566777777 66655544433      11122 22  236789999998886665  7777777666442222111111


Q ss_pred             CC--------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902        315 RG--------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG  386 (454)
Q Consensus       315 ~~--------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg  386 (454)
                      ..        ...+.+.++..|.++ .||.|+-++-.+.....-+......  ...-=..+..|.|.|+|.+.++.  |+
T Consensus        80 t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~v--g~~gw~~~~~lff~p~G~Lyav~--dg  154 (236)
T 1tl2_A           80 KKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEV--GSGGWSGFKFLFFHPNGYLYAVH--GQ  154 (236)
T ss_dssp             EEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEE--ECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred             cEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEe--ccCCCCceEEEEECCCceEEEEe--CC
Confidence            11        355666665556555 6698888875432221111000000  00000228999999999877776  77


Q ss_pred             cEEEEEcCCCcee------eEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902        387 CVKLWKITPKRTL------EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF  433 (454)
Q Consensus       387 ~v~iwd~~~~~~~------~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i  433 (454)
                      .++-+...++...      ..+.. ..-....-+.|.|+|...++.   ++.+
T Consensus       155 ~lyr~~~P~~~~~~wl~~~~~~g~-~g~~~yr~l~f~~~G~l~~v~---~g~~  203 (236)
T 1tl2_A          155 QFYKALPPVSNQDNWLARATKIGQ-GGWDTFKFLFFSSVGTLFGVQ---GGKF  203 (236)
T ss_dssp             EEEEECCCSSTTCCHHHHCEEEES-SSGGGEEEEEECTTSCEEEEE---TTEE
T ss_pred             cEEecCCCCCCCcccccccceecc-CCcceEEEEEECCCCcEEEEe---CCeE
Confidence            7544333222111      11110 111234446799999877766   5544

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=97.10  E-value=0.13  Score=45.30  Aligned_cols=212  Identities=12%  Similarity=0.112  Sum_probs=101.9

Q ss_pred             cEEEEecCCCcEEEEeCCCccEEee--cccCCCeEEEEEcCCCCEEEEEeC----CC-------cEEEEeCCCceeEEE-
Q psy17902        203 ELVASGDNNSNIKLWSSSLEHLHTF--TGHKAPITGLAISFECDTLYSSSN----DR-------SIKVWNIEDRAYVET-  268 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~-  268 (454)
                      .+++.|+.  .+.+||.....-...  ..........+...++..++.|+.    ++       .+.+||..+.+.... 
T Consensus        17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~   94 (318)
T 2woz_A           17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP   94 (318)
T ss_dssp             EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred             hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence            34555553  478888843332221  111112222233456777788773    12       277889887654322 


Q ss_pred             -eeccCCceeEEEeecCCCEEEEeeCC-------CcEEEeeccCCeEEEEccccCCe--EEEEecCCCEEEEEeC-----
Q psy17902        269 -LFGHQSAITSLDILAKNRVISSGGTD-------KSVRVWKIQEESQLVFNGHSRGI--DMTRRVNDQQFITCGE-----  333 (454)
Q Consensus       269 -~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~i--~~~~~~~~~~l~~~~~-----  333 (454)
                       +...... .+++.. ++.+++.|+.+       ..+.+||+.+..-..........  ..+...++..++.|+.     
T Consensus        95 ~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~  172 (318)
T 2woz_A           95 PLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK  172 (318)
T ss_dssp             CBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred             CCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence             1111111 222222 56777777754       25788898877655433222111  2233345666666663     


Q ss_pred             -CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCC
Q psy17902        334 -DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPL  407 (454)
Q Consensus       334 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~  407 (454)
                       -..+.+||+.+..-...-.....      ..  -.+++. -++.+++.|+.+     ..+.+||+.+.. ...+...+.
T Consensus       173 ~~~~~~~yd~~~~~W~~~~~~p~~------r~--~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~  242 (318)
T 2woz_A          173 CTNRVFIYNPKKGDWKDLAPMKTP------RS--MFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQ  242 (318)
T ss_dssp             BCCCEEEEETTTTEEEEECCCSSC------CB--SCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSS
T ss_pred             ccceEEEEcCCCCEEEECCCCCCC------cc--cceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe-EEECCCCCC
Confidence             24588999877542222111110      00  112222 266777777653     357789987763 333333222


Q ss_pred             ceeeeEEEEcCCCCEEEEEecCC
Q psy17902        408 SGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       408 ~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      ...-.+++. .+++.++.| |.+
T Consensus       243 ~r~~~~~~~-~~~~i~v~G-G~~  263 (318)
T 2woz_A          243 ERSSISLVS-LAGSLYAIG-GFA  263 (318)
T ss_dssp             CCBSCEEEE-ETTEEEEEC-CBC
T ss_pred             cccceEEEE-ECCEEEEEC-Cee
Confidence            221222332 245555555 543

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=97.02  E-value=0.14  Score=44.29  Aligned_cols=222  Identities=16%  Similarity=0.167  Sum_probs=115.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE  222 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~  222 (454)
                      .|..++.... ..++. . ||.|..|-......+.. +.     .....|..++..... .++. . ||.|..|-.. ..
T Consensus        25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~-p~-----~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~G   92 (282)
T 3qhy_B           25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTM-PA-----ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDG   92 (282)
T ss_dssp             SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSC-CG-----GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTS
T ss_pred             CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCC-Cc-----cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCC
Confidence            4777776553 23333 5 89999997654332221 11     122357777765443 3333 4 8999999862 21


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI  302 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~  302 (454)
                      .+-....-...|..++....  +.+.-. +|.|+.|-....-.+.........|..++......++  -. ||.|+.|-.
T Consensus        93 qlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~  166 (282)
T 3qhy_B           93 QTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGD  166 (282)
T ss_dssp             TTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEEC
T ss_pred             CCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecC
Confidence            21111112346777777643  344445 8999999765432221111223457666654332222  23 788999876


Q ss_pred             cCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902        303 QEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS  381 (454)
Q Consensus       303 ~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~  381 (454)
                      ....++ ........+..+..-....++.  .+|.|..|-......+.. +...        ...|..++..... .++.
T Consensus       167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~-p~~~--------~~~v~~i~~G~~h-~~al  234 (282)
T 3qhy_B          167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTV-PTEA--------LSGVSAIASGEWY-SLAL  234 (282)
T ss_dssp             CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCC-CGGG--------GSSCCEEEECSSC-EEEE
T ss_pred             CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCC-Cccc--------CCCceEEEcCCCE-EEEE
Confidence            543322 1111123444444433334444  599999997654322211 1100        1126666654433 3333


Q ss_pred             ecCCCcEEEEEcCCCc
Q psy17902        382 GSYDGCVKLWKITPKR  397 (454)
Q Consensus       382 ~~~dg~v~iwd~~~~~  397 (454)
                      .  ||.|..|=.....
T Consensus       235 ~--~g~v~~wG~n~~g  248 (282)
T 3qhy_B          235 K--NGKVIAWGSSRTA  248 (282)
T ss_dssp             E--TTEEEEESTTCCC
T ss_pred             E--CCEEEEecCCCCc
Confidence            3  8999999766543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=97.01  E-value=0.045  Score=49.51  Aligned_cols=150  Identities=12%  Similarity=0.062  Sum_probs=90.8

Q ss_pred             cCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc----CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe---------
Q psy17902        240 SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH----QSAITSLDILAKNRVISSGGTDKSVRVWKIQEES---------  306 (454)
Q Consensus       240 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~---------  306 (454)
                      +.++..++.+- ++.||.-++.....-+.+...    -..|..+..+|+|++|+..+ +..|.|..+..+.         
T Consensus        29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~  106 (452)
T 3pbp_A           29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ  106 (452)
T ss_dssp             ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred             EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence            34555555553 467777777644333333322    23678899999999998875 5578888877321         


Q ss_pred             ----EEEEcc------ccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccce-eeecccCCCCCCCCCCcEEEEE
Q psy17902        307 ----QLVFNG------HSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTH-TIPVAHGYDSSSSEPNWITSVA  371 (454)
Q Consensus       307 ----~~~~~~------~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~  371 (454)
                          ...+.-      ...+|..+.|++    +..|++-..|+.|++||+....... .+......-+.......|.+++
T Consensus       107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~  186 (452)
T 3pbp_A          107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE  186 (452)
T ss_dssp             HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred             cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence                111211      134566666664    6789999999999999997632111 2221111001112235599999


Q ss_pred             EecCCCEEEE--ecCCCcEEEE
Q psy17902        372 CLHNSDLVAS--GSYDGCVKLW  391 (454)
Q Consensus       372 ~s~~~~~l~~--~~~dg~v~iw  391 (454)
                      |.+++-.|.+  .+..|.|+-.
T Consensus       187 Fg~~~lTLYvl~~t~~GDIYAl  208 (452)
T 3pbp_A          187 FSKDGLTLYCLNTTEGGDIFAF  208 (452)
T ss_dssp             ECTTSSCEEEEECTTSCEEEEE
T ss_pred             EcCCCcEEEEEecCCCCCEEEE
Confidence            9997765555  5577887653

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.95  E-value=0.097  Score=47.03  Aligned_cols=140  Identities=8%  Similarity=0.105  Sum_probs=73.7

Q ss_pred             CCcEEEEecCC-CcEEEEeCCC--ccEEeecc----cCCCeEEEEEcCCCCEEEEEeC-C---------CcEEEEeCCCc
Q psy17902        201 NNELVASGDNN-SNIKLWSSSL--EHLHTFTG----HKAPITGLAISFECDTLYSSSN-D---------RSIKVWNIEDR  263 (454)
Q Consensus       201 ~~~~l~~~~~d-g~v~vw~~~~--~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~  263 (454)
                      ++.+++.|+.+ ..+.+||+..  ..-..+..    ......++.+  ++.+++.|+. +         ..+.+||+.+.
T Consensus        19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~   96 (357)
T 2uvk_A           19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN   96 (357)
T ss_dssp             TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred             CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence            66676777643 4688888742  22222221    1111222222  5667777765 2         46889999876


Q ss_pred             eeEEEeecc-CCceeEEEeecCCCEEEEeeCC---------------------------------------CcEEEeecc
Q psy17902        264 AYVETLFGH-QSAITSLDILAKNRVISSGGTD---------------------------------------KSVRVWKIQ  303 (454)
Q Consensus       264 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~~  303 (454)
                      +....-... .......+...++.+++.|+.+                                       ..+.+||..
T Consensus        97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~  176 (357)
T 2uvk_A           97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS  176 (357)
T ss_dssp             EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred             cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence            543221111 1111111222467777878754                                       578899998


Q ss_pred             CCeEEEEcccc--CCe-EEEEecCCCEEEEEeC------CCCEEEEec
Q psy17902        304 EESQLVFNGHS--RGI-DMTRRVNDQQFITCGE------DGTLSLWSI  342 (454)
Q Consensus       304 ~~~~~~~~~~~--~~i-~~~~~~~~~~l~~~~~------dg~i~iwd~  342 (454)
                      +..-.......  ... ..+...++..++.|+.      ...+.+||+
T Consensus       177 ~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~  224 (357)
T 2uvk_A          177 TQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF  224 (357)
T ss_dssp             TTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred             CCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence            87655332211  111 3344446666666653      345777876

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=96.94  E-value=0.013  Score=47.73  Aligned_cols=146  Identities=9%  Similarity=-0.095  Sum_probs=79.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCC-cccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C-
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPF-VKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S-  220 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~-  220 (454)
                      .+..++|+|+|.+.++  .+|.+.-.+..+.....-+.. .......-....++.|.++|.+.++  .||.|+-++. + 
T Consensus        42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            5779999999886666  677765555433111100000 0000000111378899999988777  4598887776 2 


Q ss_pred             CccEE-----ee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee------EEEee-ccCCceeEEEeecCCCE
Q psy17902        221 LEHLH-----TF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY------VETLF-GHQSAITSLDILAKNRV  287 (454)
Q Consensus       221 ~~~~~-----~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~  287 (454)
                      +..-.     .+ ..-=..+..|.|.|+|.+.++.  |+.++-+...+...      ...+- ..-...+.+.|.+++.+
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l  195 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL  195 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred             CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence            21111     00 1111467899999999776666  78765443332210      11111 22223445668888877


Q ss_pred             EEEeeCCCcE
Q psy17902        288 ISSGGTDKSV  297 (454)
Q Consensus       288 l~~~~~dg~i  297 (454)
                      .++.  ++.+
T Consensus       196 ~~v~--~g~~  203 (236)
T 1tl2_A          196 FGVQ--GGKF  203 (236)
T ss_dssp             EEEE--TTEE
T ss_pred             EEEe--CCeE
Confidence            6655  6633

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=96.81  E-value=0.22  Score=43.43  Aligned_cols=242  Identities=8%  Similarity=-0.009  Sum_probs=130.4

Q ss_pred             cCCCCEEEEEe--CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC--------------CcE
Q psy17902        151 TSDSKHVYSAC--KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN--------------SNI  214 (454)
Q Consensus       151 s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~v  214 (454)
                      ++++..|+...  .++.|...+.+...... +.          .-.+-.+++++.+|+.+...              ..|
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~-l~----------~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~I   90 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHK-LS----------NDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSL   90 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETTSCSCEE-EE----------EEEEEEEEECSSEEEEEEECC------CCSSCCSEEE
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCCCCCCEE-cc----------CCceeeEEEcCCEEEEEECCCCcccccceeccCCCeE
Confidence            34666776664  24666666665443222 11          12234567888888877543              356


Q ss_pred             EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe----CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS----NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +..++.+.....+....    +..|+++++.|+-..    ....|+..++.... ...+..+..    ..++++++.|+-
T Consensus        91 y~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~  161 (302)
T 3s25_A           91 CRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYY  161 (302)
T ss_dssp             EEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEE
T ss_pred             EEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEE
Confidence            77777555444443222    236777888888765    34456666776433 334433332    456777877765


Q ss_pred             eeC-CCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC--CCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        291 GGT-DKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED--GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       291 ~~~-dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      .+. ...|.+.++.......+..  .......+|.++.|+-....  ..|..-++.... ...+.           ...+
T Consensus       162 t~~g~~~Iy~~~l~g~~~~~l~~--~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-----------~~~~  227 (302)
T 3s25_A          162 NNPKNGQLYRYDTASQSEALFYD--CNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-----------EANI  227 (302)
T ss_dssp             ECTTTCCEEEEETTTTEEEEEEC--SCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-----------CSCE
T ss_pred             EeCCCceEEEEECCCCCEEEEeC--CCccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-----------CCCc
Confidence            554 5688888887765543322  22222344667776655433  345555554332 22221           1113


Q ss_pred             EEEEEecCCCEEEEec--CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        368 TSVACLHNSDLVASGS--YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                        ..|+|++.+|+-++  ..+.|..-++.... ...+..  .  .+.  .+++.+.+|+-+--..+.|..
T Consensus       228 --~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~-r~~l~~--~--~~~--~i~i~~d~Iy~td~~~~~i~~  288 (302)
T 3s25_A          228 --EHYNVYGSLIFYQRGGDNPALCVVKNDGTG-FKELAK--G--EFC--NINVTSQYVYFTDFVSNKEYC  288 (302)
T ss_dssp             --EEEEEETTEEEEEECSSSCEEEEEETTSCC-CEEEEE--S--CEE--EEEECSSEEEEEETTTCCEEE
T ss_pred             --ceEEECCCEEEEEECCCCcEEEEEECCCCc-cEEeeC--C--ccc--eEEEeCCEEEEEECCCCeEEE
Confidence              34788888777553  34566666665433 233322  1  133  445567788877334455443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.80  E-value=0.2  Score=49.63  Aligned_cols=220  Identities=12%  Similarity=0.029  Sum_probs=110.4

Q ss_pred             CCCcEEEEecCC----CcEEEEeCCCccEEeec---------ccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEe
Q psy17902        200 NNNELVASGDNN----SNIKLWSSSLEHLHTFT---------GHKAPITGLAISF-ECDTLYSSSND------RSIKVWN  259 (454)
Q Consensus       200 ~~~~~l~~~~~d----g~v~vw~~~~~~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd  259 (454)
                      .++.+++.|+.+    ..+.+||.....-..+.         .....- +++..+ ++..++.|+.+      ..+.+||
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd  474 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFD  474 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence            466777777753    46788887333222222         111122 233333 67777777753      3578999


Q ss_pred             CCCceeEEEeecc-CCceeEEEeecCCCEEEEeeCCC--cEEEeeccCCeEEEEcc------ccCCeEEEEec-C-CCEE
Q psy17902        260 IEDRAYVETLFGH-QSAITSLDILAKNRVISSGGTDK--SVRVWKIQEESQLVFNG------HSRGIDMTRRV-N-DQQF  328 (454)
Q Consensus       260 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~------~~~~i~~~~~~-~-~~~l  328 (454)
                      +.+.+....-... ...-.+++...++.+++.|+.++  .+.+||..+..-.....      ......++... . +..+
T Consensus       475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy  554 (695)
T 2zwa_A          475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI  554 (695)
T ss_dssp             TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred             CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence            8876533221111 11112233324778888887655  68999998877654332      11111223322 2 4466


Q ss_pred             EEEeC--C-----CCEEEEecCCCcc-----ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--------CcE
Q psy17902        329 ITCGE--D-----GTLSLWSILKKVP-----THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--------GCV  388 (454)
Q Consensus       329 ~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~v  388 (454)
                      +.|+.  +     ..+.+||+.+..-     ...+......      ...-.++....++.+++.|+.+        ..|
T Consensus       555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~------~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v  628 (695)
T 2zwa_A          555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF------QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI  628 (695)
T ss_dssp             EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG------CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred             EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC------CcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence            66764  2     3588999887762     1111110000      0001123333447777777743        459


Q ss_pred             EEEEcCCCceeeEeccCCCc------ee-eeEEEEcCCCCEEEEEe
Q psy17902        389 KLWKITPKRTLEFLQDIPLS------GV-INSLVFTSDHKHLVAGI  427 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~~~~------~~-v~~l~~s~d~~~l~~~~  427 (454)
                      .+||+.+..-. .+......      .. -.+++..++|+.++.|+
T Consensus       629 ~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG  673 (695)
T 2zwa_A          629 ISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG  673 (695)
T ss_dssp             EEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred             EEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence            99999876433 22210000      00 13445556667777774

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=96.79  E-value=0.21  Score=49.45  Aligned_cols=195  Identities=10%  Similarity=0.096  Sum_probs=102.6

Q ss_pred             CCCCEEEEEeCC----CeEEEEEcCCCceeccc-CCcccCCCCCCceEEEEEeC-CCcEEEEecCC------CcEEEEeC
Q psy17902        152 SDSKHVYSACKD----GIIIKWLLETRSKVCSS-PFVKTDRKSYPPILALAVAN-NNELVASGDNN------SNIKLWSS  219 (454)
Q Consensus       152 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~v~vw~~  219 (454)
                      .++.+++.|+.+    ..+.+||..+..-.... +...........-.+++..+ ++.+++.|+.+      ..+.+||.
T Consensus       396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~  475 (695)
T 2zwa_A          396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM  475 (695)
T ss_dssp             CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred             ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence            456677777753    46788888776433221 10000000111112333333 77788888754      35788887


Q ss_pred             CCccEEeecccCC--CeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEee-----ccCCceeEEEeecC-CCEEE
Q psy17902        220 SLEHLHTFTGHKA--PITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLF-----GHQSAITSLDILAK-NRVIS  289 (454)
Q Consensus       220 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~-~~~l~  289 (454)
                      ....-..+.....  .-.+++...++..++.|+.++  .+.+||+.+......-.     .......++.+..+ +.+++
T Consensus       476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv  555 (695)
T 2zwa_A          476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII  555 (695)
T ss_dssp             TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred             CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence            4432222211111  112233324778888887655  69999998876432211     11122233555555 66777


Q ss_pred             EeeCC-------CcEEEeeccCCe------EEEEcc---cc-CCeEEEEecCCCEEEEEeC--------CCCEEEEecCC
Q psy17902        290 SGGTD-------KSVRVWKIQEES------QLVFNG---HS-RGIDMTRRVNDQQFITCGE--------DGTLSLWSILK  344 (454)
Q Consensus       290 ~~~~d-------g~i~i~d~~~~~------~~~~~~---~~-~~i~~~~~~~~~~l~~~~~--------dg~i~iwd~~~  344 (454)
                      .|+.+       ..+.+||+.+..      ......   .. ....++...++..++.|+.        ...|.+||+.+
T Consensus       556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t  635 (695)
T 2zwa_A          556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS  635 (695)
T ss_dssp             ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred             ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence            77652       358899998877      222211   11 1223333333667777774        34689999877


Q ss_pred             Cc
Q psy17902        345 KV  346 (454)
Q Consensus       345 ~~  346 (454)
                      ..
T Consensus       636 ~~  637 (695)
T 2zwa_A          636 ET  637 (695)
T ss_dssp             TE
T ss_pred             Ce
Confidence            64

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=96.65  E-value=0.28  Score=42.36  Aligned_cols=218  Identities=14%  Similarity=0.090  Sum_probs=109.3

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCC-CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSS-LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      .|..++..... .++. . +|.|..|-.. ...+-........|..++..... .++. . ||.|+.|-....-.+..-.
T Consensus        25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~   98 (282)
T 3qhy_B           25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA   98 (282)
T ss_dssp             SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred             CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence            57777765442 3333 4 8999999862 21111111223467777765432 3333 5 8999999865432221111


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      .-...|..|+......++  -. +|.|+.|-.....++ ........+..+..-....+ +-. +|.|..|-......+.
T Consensus        99 ~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~-~l~-~G~v~~wG~n~~gqlg  173 (282)
T 3qhy_B           99 EARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTAL-AVK-NGGVIAWGDNYFGQTT  173 (282)
T ss_dssp             GGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEE-EEE-TTEEEEEECCTTSTTS
T ss_pred             ccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEE-EEE-CCEEEEecCCCCCCCC
Confidence            123467777765433333  34 899999976543322 11122233444433333333 334 7999999765433222


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT  429 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~  429 (454)
                      . +...        ...|..++..... .++.  .||.|+.|-......+..-.  .....|..++....  +.++- . 
T Consensus       174 ~-p~~~--------~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~--~~~~~v~~i~~G~~--h~~al-~-  235 (282)
T 3qhy_B          174 V-PAEA--------QSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT--EALSGVSAIASGEW--YSLAL-K-  235 (282)
T ss_dssp             C-CGGG--------GSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG--GGGSSCCEEEECSS--CEEEE-E-
T ss_pred             C-ceec--------CCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc--ccCCCceEEEcCCC--EEEEE-E-
Confidence            1 1110        1227777764432 3333  58999999765442221111  12234555654432  22222 2 


Q ss_pred             CCceeeeee
Q psy17902        430 EHRFGRWKT  438 (454)
Q Consensus       430 d~~i~~W~~  438 (454)
                      |+.|+.|=.
T Consensus       236 ~g~v~~wG~  244 (282)
T 3qhy_B          236 NGKVIAWGS  244 (282)
T ss_dssp             TTEEEEEST
T ss_pred             CCEEEEecC
Confidence            777777743

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=96.55  E-value=0.53  Score=44.25  Aligned_cols=261  Identities=14%  Similarity=0.103  Sum_probs=139.6

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCC-------------------CC--ceEEEEEe---CCCcEEEEecC-
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS-------------------YP--PILALAVA---NNNELVASGDN-  210 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------------------~~--~v~~~~~~---~~~~~l~~~~~-  210 (454)
                      .+.+|+..|.|+|+-+.++..+..++........                   .+  --..+++.   .||+||+.-.. 
T Consensus        72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka  151 (638)
T 3sbq_A           72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA  151 (638)
T ss_dssp             EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred             EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence            3678888999999999888877666543221100                   00  01123443   26778877664 


Q ss_pred             CCcEEEEeC-CCcc--EEeecccCCCeEEEEEc--CCCCEEEEEeC-------CCcEE------------EEeCCCceeE
Q psy17902        211 NSNIKLWSS-SLEH--LHTFTGHKAPITGLAIS--FECDTLYSSSN-------DRSIK------------VWNIEDRAYV  266 (454)
Q Consensus       211 dg~v~vw~~-~~~~--~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i~------------iwd~~~~~~~  266 (454)
                      +..|...++ ..++  +..+ .....+.+++|-  |+..++++++.       ||...            ..|..+.+..
T Consensus       152 n~RvAri~l~~~~~d~Ii~i-Pn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~  230 (638)
T 3sbq_A          152 NSRVARIRLDIMKCDKMITV-PNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMA  230 (638)
T ss_dssp             TTEEEEEETTTTEEEEEEEC-TTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEE
T ss_pred             CcceEEEECCcEeeceeEeC-CCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEE
Confidence            567777777 3332  3322 345678888886  67788888775       33321            1122222221


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCC---------------cEEEeeccC----------------CeEE-------
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDK---------------SVRVWKIQE----------------ESQL-------  308 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~i~d~~~----------------~~~~-------  308 (454)
                      ..+. -.+....+...+++.+.++.+.+.               .+.++++..                +-.+       
T Consensus       231 ~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~  309 (638)
T 3sbq_A          231 FQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD  309 (638)
T ss_dssp             EEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred             EEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence            1111 012223344456777777665432               245555420                1111       


Q ss_pred             --------EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCccc---------e--eeecccCCCCCCCCCCcEE
Q psy17902        309 --------VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKVPT---------H--TIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       309 --------~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~---------~--~~~~~~~~~~~~~~~~~i~  368 (454)
                              ......++-.+-..|++.++++++ -+.++.++|+......         .  ......+        -...
T Consensus       310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G--------lGPl  381 (638)
T 3sbq_A          310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG--------LGPL  381 (638)
T ss_dssp             TBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC--------SCEE
T ss_pred             ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC--------Cccc
Confidence                    111112222344456677777665 7889999998742110         0  1111111        1267


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCC----------ceeeEeccCCCceeeeE---EEEcCCCCEEEEE
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPK----------RTLEFLQDIPLSGVINS---LVFTSDHKHLVAG  426 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~~v~~---l~~s~d~~~l~~~  426 (454)
                      ..+|.++|....+---|..|.-|++...          ..+..+.-+...+....   =.-.|||++|++.
T Consensus       382 Ht~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l  452 (638)
T 3sbq_A          382 HTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL  452 (638)
T ss_dssp             EEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred             EEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence            8999999966666678999999999653          23444443211111111   1236899999887

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=95.23  E-value=1.5  Score=38.86  Aligned_cols=102  Identities=14%  Similarity=0.146  Sum_probs=62.9

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEE---ee----cccCCCeEEEEEcCC---CCEEEEE-e--CCCcEEE
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLH---TF----TGHKAPITGLAISFE---CDTLYSS-S--NDRSIKV  257 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~---~~----~~~~~~v~~~~~~~~---~~~l~~~-~--~dg~i~i  257 (454)
                      .....|+|.|+|.++++--..|.|++++.......   .+    .........|+|+|+   +..|+.. +  .++.|.-
T Consensus        32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R  111 (347)
T 3das_A           32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR  111 (347)
T ss_dssp             SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred             CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence            35789999999997777665899999986322222   11    123566889999995   3445443 2  3456766


Q ss_pred             EeCCCc----------eeEE-Eee-ccCCceeEEEeecCCCEEEEee
Q psy17902        258 WNIEDR----------AYVE-TLF-GHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       258 wd~~~~----------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      |.+..+          +.+. .+. ........|.|.|+|.+.++.+
T Consensus       112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G  158 (347)
T 3das_A          112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG  158 (347)
T ss_dssp             EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred             EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence            766541          1121 121 1112346799999998777754

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.83  E-value=2.5  Score=39.23  Aligned_cols=102  Identities=13%  Similarity=0.101  Sum_probs=61.1

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCC-Ccc--EEeecc------cCCCeEEEEEcCC---CCEEEEEeC--------
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSS-LEH--LHTFTG------HKAPITGLAISFE---CDTLYSSSN--------  251 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~--------  251 (454)
                      ....|+|.|+|+++++-...+.|++++.. +..  +..+..      ....+..|+|+|+   +..|+.+..        
T Consensus        28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~  107 (454)
T 1cru_A           28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD  107 (454)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred             CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence            56799999999977776544578888763 332  222221      2456779999995   555555432        


Q ss_pred             -----CCcEEEEeCCCc-------eeEEE-ee-ccCCceeEEEeecCCCEEEEeeC
Q psy17902        252 -----DRSIKVWNIEDR-------AYVET-LF-GHQSAITSLDILAKNRVISSGGT  293 (454)
Q Consensus       252 -----dg~i~iwd~~~~-------~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~  293 (454)
                           ...|.-|++...       +.+.. +. ........|.|.|+|.+.++.+.
T Consensus       108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd  163 (454)
T 1cru_A          108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD  163 (454)
T ss_dssp             CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred             cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence                 235666665321       11211 21 11234688999999987776543

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=94.51  E-value=2.2  Score=37.23  Aligned_cols=191  Identities=13%  Similarity=0.082  Sum_probs=108.4

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---------
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS---------  220 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---------  220 (454)
                      ++..++++.+.+|.|+--.+........-  ............+..+........++..+..|.++-+...         
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            45678899999999998877654332210  0000000123345555555556667777778887776641         


Q ss_pred             -Ccc---EEeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEeecCCC
Q psy17902        221 -LEH---LHTFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       221 -~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                       +..   ...+. ....|.++...+   +..+|+.++..|.++...+...       .....+.. ...+..+.....+.
T Consensus        86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~  163 (312)
T 1suu_A           86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE  163 (312)
T ss_dssp             --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred             CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence             111   11122 223455544332   4678889999999998887432       22222332 45566665555556


Q ss_pred             EEEEeeCCCcEEEeeccCCeE---------E-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQ---------L-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~---------~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                      .++..+.+|.+..+....-..         . .+......+.+....++..+++.+..|......+..
T Consensus       164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            677788999988887754111         1 222222223333344566788889999988887743

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=94.34  E-value=2.9  Score=37.87  Aligned_cols=140  Identities=10%  Similarity=-0.038  Sum_probs=68.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCC----cEEEEeCCCccEEe
Q psy17902        154 SKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNS----NIKLWSSSLEHLHT  226 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg----~v~vw~~~~~~~~~  226 (454)
                      ...|++|+..| +.+++... +........ .   .....|.+|++.|  .+.+.+.+ ..|    .|...+-.+..-..
T Consensus        22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~---~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~   95 (394)
T 3b7f_A           22 PVMLLVATIKG-AWFLASDPARRTWELRGP-V---FLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTE   95 (394)
T ss_dssp             CCEEEEEETTE-EEEEEECTTSCSEEEEEE-E---STTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEE
T ss_pred             CCEEEEEecCc-eEEEECCCCCCCceECCc-c---CCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceE
Confidence            34777888777 54554432 221111100 0   1234799999998  45544444 344    34443322221111


Q ss_pred             ec------c--------cCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCceeEEEeec-------------------
Q psy17902        227 FT------G--------HKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAYVETLFG-------------------  271 (454)
Q Consensus       227 ~~------~--------~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------------------  271 (454)
                      +.      .        +...|.++++.|.  ...|++++..+.|...+-. +.....+..                   
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~  174 (394)
T 3b7f_A           96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTP  174 (394)
T ss_dssp             CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred             CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCC
Confidence            11      1        1125778899872  4567776666666555422 222222211                   


Q ss_pred             cCCceeEEEeecC-CCEEEEeeCCCcEEEe
Q psy17902        272 HQSAITSLDILAK-NRVISSGGTDKSVRVW  300 (454)
Q Consensus       272 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~  300 (454)
                      ....|.+|.++|. ...|+.+..++.|...
T Consensus       175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s  204 (394)
T 3b7f_A          175 DGPKMHSILVDPRDPKHLYIGMSSGGVFES  204 (394)
T ss_dssp             CCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred             CCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence            1235788999874 3445555444444443

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=94.30  E-value=3.4  Score=38.42  Aligned_cols=108  Identities=12%  Similarity=0.002  Sum_probs=59.3

Q ss_pred             eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCc---eecccCCcccC---CCCCCceEEEEEeCC----CcEEEEecC--C
Q psy17902        145 ITCIAVTSDSK-HVYSACKDGIIIKWLLETRS---KVCSSPFVKTD---RKSYPPILALAVANN----NELVASGDN--N  211 (454)
Q Consensus       145 V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~---~~~~~~v~~~~~~~~----~~~l~~~~~--d  211 (454)
                      ...|+|.|++. .|+++...|.|++++.....   .+..+......   .........|+|+|+    +.+.++-+.  +
T Consensus        16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~   95 (463)
T 2wg3_C           16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE   95 (463)
T ss_dssp             EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred             ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence            68999999986 55566788999999754321   11111110000   012457889999996    443333221  1


Q ss_pred             ----------CcEEEEeCCC-----------ccEEeec--ccCCCeEEEEEcCCCCEEEEEeCC
Q psy17902        212 ----------SNIKLWSSSL-----------EHLHTFT--GHKAPITGLAISFECDTLYSSSND  252 (454)
Q Consensus       212 ----------g~v~vw~~~~-----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d  252 (454)
                                ..|.-|.+..           +.+..+.  ........|.|.|||.++++.+..
T Consensus        96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred             CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence                      1333354421           1122221  122346789999999877776543

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=94.01  E-value=3.4  Score=37.40  Aligned_cols=157  Identities=6%  Similarity=-0.005  Sum_probs=76.3

Q ss_pred             CCCeEEEEEcC-CCCEEEEEeCCC----eEEEEEcCCCceecccCCcccCC-C-------CCCceEEEEEeCC--CcEEE
Q psy17902        142 RASITCIAVTS-DSKHVYSACKDG----IIIKWLLETRSKVCSSPFVKTDR-K-------SYPPILALAVANN--NELVA  206 (454)
Q Consensus       142 ~~~V~~~~~s~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~-~-------~~~~v~~~~~~~~--~~~l~  206 (454)
                      ...|.+|++.| +...|++++..|    .|... .+.+..-..+....... .       ....|.++++.|.  ...|.
T Consensus        54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~  132 (394)
T 3b7f_A           54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY  132 (394)
T ss_dssp             TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred             CCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence            35699999998 334455555444    34332 22232222111100000 0       1235788999862  34455


Q ss_pred             EecCCCcEEEEeCCCccEEeecc-------------------cCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        207 SGDNNSNIKLWSSSLEHLHTFTG-------------------HKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       207 ~~~~dg~v~vw~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      ++...+.|...+-.+..-..+..                   ....+.+|.+.|. ...|+.+..++.|...+- .++..
T Consensus       133 ~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW  211 (394)
T 3b7f_A          133 AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDW  211 (394)
T ss_dssp             EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSC
T ss_pred             EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCc
Confidence            55555655555433322222210                   1235788999873 455666655554554432 23222


Q ss_pred             EEeec-----c--------CCceeEEEeecC-CCEEEEeeCCCcEEEee
Q psy17902        267 ETLFG-----H--------QSAITSLDILAK-NRVISSGGTDKSVRVWK  301 (454)
Q Consensus       267 ~~~~~-----~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d  301 (454)
                      ..+..     +        ...+.+|.++|. ...|+.+...+ |...+
T Consensus       212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~  259 (394)
T 3b7f_A          212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD  259 (394)
T ss_dssp             EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred             eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence            22211     0        124888999886 35666665444 44443

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=93.93  E-value=4  Score=37.92  Aligned_cols=103  Identities=8%  Similarity=0.009  Sum_probs=60.0

Q ss_pred             ceEEEEEeCCCc-EEEEecCCCcEEEEeCCCc----cEEeec---------ccCCCeEEEEEcCC----CCEEEEEeC--
Q psy17902        192 PILALAVANNNE-LVASGDNNSNIKLWSSSLE----HLHTFT---------GHKAPITGLAISFE----CDTLYSSSN--  251 (454)
Q Consensus       192 ~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~----~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~--  251 (454)
                      ....|+|.|++. .|+++...|.|++++..+.    .+..+.         ........|+|+|+    +.+.++-+.  
T Consensus        15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~   94 (463)
T 2wg3_C           15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ   94 (463)
T ss_dssp             SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred             CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence            467899999986 4555567899999976432    222221         11456789999996    333333222  


Q ss_pred             C----------CcEEEEeCCC----------ceeEEEee--ccCCceeEEEeecCCCEEEEeeCC
Q psy17902        252 D----------RSIKVWNIED----------RAYVETLF--GHQSAITSLDILAKNRVISSGGTD  294 (454)
Q Consensus       252 d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d  294 (454)
                      +          ..|.-|.+..          .+.+..+.  ........|.|.|+|.+.++.+..
T Consensus        95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~  159 (463)
T 2wg3_C           95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG  159 (463)
T ss_dssp             CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred             CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence            1          1344455532          12333332  112335789999999877776543

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=93.89  E-value=4.4  Score=38.24  Aligned_cols=73  Identities=5%  Similarity=0.030  Sum_probs=50.4

Q ss_pred             EEEEEEecCCCEEEEec-CCCcEEEEEcCCC------cee----eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        367 ITSVACLHNSDLVASGS-YDGCVKLWKITPK------RTL----EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~------~~~----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      ...+.++|+|+++++++ .+.+|.++++..-      +.+    .........-.....+|.++| ..+++.--|..|..
T Consensus       325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvk  403 (638)
T 3sbq_A          325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVK  403 (638)
T ss_dssp             CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEEE
T ss_pred             CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEEE
Confidence            55688999999776654 5889999998742      110    001111234456778999999 66666678999999


Q ss_pred             eeeeC
Q psy17902        436 WKTIK  440 (454)
Q Consensus       436 W~~~~  440 (454)
                      |+...
T Consensus       404 Wni~~  408 (638)
T 3sbq_A          404 WNMEE  408 (638)
T ss_dssp             EEHHH
T ss_pred             EeccH
Confidence            99754

>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}

Probab=92.55  E-value=4.9  Score=34.96  Aligned_cols=241  Identities=9%  Similarity=0.028  Sum_probs=119.5

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C-----
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S-----  220 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~-----  220 (454)
                      |+..++++.+.+|.|+--.+........-  ............+..+........|+..+..|.++-+..    .     
T Consensus         1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a   80 (307)
T 1zi0_A            1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA   80 (307)
T ss_dssp             CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred             CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence            35567889999999988777654322210  000000012234444444445556666677787666553    1     


Q ss_pred             -CccEE---eecccCCCeEEEEEc---CCCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEeecCCC
Q psy17902        221 -LEHLH---TFTGHKAPITGLAIS---FECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       221 -~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                       +.++.   .+. ....|.++...   .++.+++.++..|.++...+...       .....+..+ ..+..+.......
T Consensus        81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~  158 (307)
T 1zi0_A           81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED  158 (307)
T ss_dssp             CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred             CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence             11111   122 23456555432   34568999999999999876422       111223333 4555555554555


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE----------EEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL----------VFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH  355 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~  355 (454)
                      .|+..+..|.+..+....-...          .+.. ...+..+. ..++..+++.+..|.++..++........-....
T Consensus       159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~  237 (307)
T 1zi0_A          159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGV  237 (307)
T ss_dssp             EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCE
T ss_pred             EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCE
Confidence            6667788888888776431111          1211 22233333 3345678888999988887763321110000000


Q ss_pred             CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      ........+..+..+....+..-|+..+.+|.+.-+.+..
T Consensus       238 ~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~  277 (307)
T 1zi0_A          238 ISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE  277 (307)
T ss_dssp             ESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred             EeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence            0000001123354444433444555666677777666653

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=91.80  E-value=6.3  Score=34.59  Aligned_cols=229  Identities=8%  Similarity=0.015  Sum_probs=123.4

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCcee-------cccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C--
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKV-------CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S--  220 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~--  220 (454)
                      ...+++.+.+|.|+--.+.+....       ....+     .....+..+........|+.-+..|.++-...    .  
T Consensus         3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~-----ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~   77 (327)
T 3uc1_A            3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL-----KQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEAS   77 (327)
T ss_dssp             CEEEEEEETTSEEEEEEHHHHHHHC--------CCC-----CGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCC
T ss_pred             ccEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc-----CCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence            357788888999987664432211       11111     12334555555555556666666787665543    1  


Q ss_pred             ----CccEEeec--ccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCce-------eEEEeeccCCceeEEEeecC
Q psy17902        221 ----LEHLHTFT--GHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRA-------YVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       221 ----~~~~~~~~--~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~  284 (454)
                          +.++..+-  .....|.++...+   +..+++.++.+|.|+...+....       ....+.. ...+..+.....
T Consensus        78 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~  156 (327)
T 3uc1_A           78 RTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSA  156 (327)
T ss_dssp             SSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECT
T ss_pred             ccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecC
Confidence                11111111  1234555554433   47799999999999998765422       1122333 344555555555


Q ss_pred             CCEEEEeeCCCcEEEeecc--CCeEE----------EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc----
Q psy17902        285 NRVISSGGTDKSVRVWKIQ--EESQL----------VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT----  348 (454)
Q Consensus       285 ~~~l~~~~~dg~i~i~d~~--~~~~~----------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~----  348 (454)
                      ...|+..+..|.+..+...  .-...          .+......+.+....++..++..+..|.++.-.+......    
T Consensus       157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~  236 (327)
T 3uc1_A          157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG  236 (327)
T ss_dssp             TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred             CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence            5667777888988877766  21111          1222222233344445668999999999988776432221    


Q ss_pred             ---eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        349 ---HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       349 ---~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                         ..+...       .....+..+....+...|+..+.+|.+.-++...
T Consensus       237 ~G~~~~~l~-------~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~  279 (327)
T 3uc1_A          237 KGVLTVMYD-------RRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ  279 (327)
T ss_dssp             CCEESSCCC-------TTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred             CcEEEEEec-------CCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence               111110       0012244444444445666677778888887653

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=90.18  E-value=9  Score=33.54  Aligned_cols=187  Identities=10%  Similarity=0.062  Sum_probs=103.5

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C------C
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S------L  221 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~------~  221 (454)
                      |+..++++.+.+|.|+--.+...........   .......+..+........|+..+..|.++-+..    .      +
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~---~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G   79 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDF---AMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG   79 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCC---CCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCcccc---ccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence            5667889999999998876553221111000   0123345555555555666777777888766653    1      1


Q ss_pred             ccEE---eecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCc--------eeEEEeeccCCceeEEEeecCCCE
Q psy17902        222 EHLH---TFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDR--------AYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       222 ~~~~---~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      .++.   .+. ....|.++...++   +.+|+.++.+|.++...+...        .....+.. ...+..+........
T Consensus        80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~  157 (323)
T 1wp5_A           80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNE  157 (323)
T ss_dssp             EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSE
T ss_pred             cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCE
Confidence            1111   111 2234555433332   568999999999999877422        11112222 245555555545566


Q ss_pred             EEEeeCCCcEEEeeccCCeEE----------EEccccCCeEEEEecCCC-EEEEEeCCCCEEEEecC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL----------VFNGHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSIL  343 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~  343 (454)
                      |+..+.+|.+..+....-...          .+......+.+....++. .+++.+..|..+..++.
T Consensus       158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~  224 (323)
T 1wp5_A          158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT  224 (323)
T ss_dssp             EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred             EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence            777888998888876431111          121111223333334444 78888888888777664

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=89.98  E-value=10  Score=33.89  Aligned_cols=151  Identities=7%  Similarity=0.011  Sum_probs=85.4

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C----
Q psy17902        151 TSDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S----  220 (454)
Q Consensus       151 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~----  220 (454)
                      -|+..++++.+.+|.|+--.+........-  ............+..+........|+..+..|.++-+..    .    
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~   83 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN   83 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence            467789999999999998765432211100  000000023445666666666666777777787766653    1    


Q ss_pred             --CccEE---eecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCce-------eEEEeeccCCceeEEEeecCC
Q psy17902        221 --LEHLH---TFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRA-------YVETLFGHQSAITSLDILAKN  285 (454)
Q Consensus       221 --~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~  285 (454)
                        +..+.   .+. ....|.++....   ++.+|+.++..|.++...+....       ....+.. ...+..+......
T Consensus        84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~  161 (370)
T 3l6v_A           84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD  161 (370)
T ss_dssp             SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred             cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence              11111   122 234555554432   45689999999999988764322       1222322 3445455554445


Q ss_pred             CEEEEeeCCCcEEEeecc
Q psy17902        286 RVISSGGTDKSVRVWKIQ  303 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~  303 (454)
                      ..|+..+..|.+..+...
T Consensus       162 ~~i~l~T~~G~~irf~~~  179 (370)
T 3l6v_A          162 RDVLLFASNGKTVRFGES  179 (370)
T ss_dssp             CEEEEEETTSEEEEEEGG
T ss_pred             ceEEEEeCCCeEEEEEcc
Confidence            566677788888777654

>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1

Probab=89.62  E-value=9.8  Score=33.12  Aligned_cols=193  Identities=13%  Similarity=0.104  Sum_probs=106.6

Q ss_pred             CCCcEEEEecCCCcEEEEeCC-Cc-------cEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---Cc----
Q psy17902        200 NNNELVASGDNNSNIKLWSSS-LE-------HLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DR----  263 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~~-~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~----  263 (454)
                      ++..++++.+.+|.|+--.+. ..       -+..+. .-.+.+..+........++..+..|.++-+...   ..    
T Consensus         6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~   85 (312)
T 1suu_A            6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS   85 (312)
T ss_dssp             --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred             CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence            456678888999999887651 11       111111 122345555555556678888899987766543   11    


Q ss_pred             --ee---EEEeeccCCceeEEEeec---CCCEEEEeeCCCcEEEeeccCCeE-------E-EEccccCCeEEEEecCCCE
Q psy17902        264 --AY---VETLFGHQSAITSLDILA---KNRVISSGGTDKSVRVWKIQEESQ-------L-VFNGHSRGIDMTRRVNDQQ  327 (454)
Q Consensus       264 --~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-------~-~~~~~~~~i~~~~~~~~~~  327 (454)
                        ..   ...+. ....|.++...+   +..+|+..+..|.++...+..-..       . .+......+......++..
T Consensus        86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~  164 (312)
T 1suu_A           86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK  164 (312)
T ss_dssp             --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred             CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence              11   01121 223455544333   456777889999998887743211       1 2222222233333445678


Q ss_pred             EEEEeCCCCEEEEecCCCccceee-ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902        328 FITCGEDGTLSLWSILKKVPTHTI-PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP  395 (454)
Q Consensus       328 l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~  395 (454)
                      ++..+.+|.+..+....-...... ........  .....|..+...+++..|++.+..|..+...+..
T Consensus       165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L--~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e  231 (312)
T 1suu_A          165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL--KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK  231 (312)
T ss_dssp             EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC--CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred             EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe--CCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence            889999999988877432111110 00000000  1123366666655666788888999999998853

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=89.47  E-value=5.8  Score=40.75  Aligned_cols=39  Identities=23%  Similarity=0.300  Sum_probs=33.5

Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL  402 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~  402 (454)
                      ...+.+++..++..++++-+.|+++|+|++.++.++...
T Consensus       235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~  273 (950)
T 4gq2_M          235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI  273 (950)
T ss_dssp             TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred             cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence            344788888888899999999999999999999877664

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=88.33  E-value=11  Score=32.09  Aligned_cols=119  Identities=12%  Similarity=0.042  Sum_probs=73.4

Q ss_pred             CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      ....|.++.... +..+++..+.+|.++...+.... ...-............+..+........|+..+..|.+..+..
T Consensus        66 ~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~  144 (276)
T 3no0_A           66 REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSV  144 (276)
T ss_dssp             TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred             CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence            355666665421 46799999999999999877653 1111100000123345666666556667888888899888875


Q ss_pred             C-----C-----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902        220 S-----L-----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       220 ~-----~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~  261 (454)
                      .     +     .....+. ....|.++...+++..++..+..|.++...+.
T Consensus       145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~  195 (276)
T 3no0_A          145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE  195 (276)
T ss_dssp             GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred             hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence            1     1     1111222 23556666555566788999999999888764

>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}

Probab=87.86  E-value=12  Score=31.89  Aligned_cols=197  Identities=11%  Similarity=0.065  Sum_probs=106.4

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEe---CCCceeEEEeeccCCceeEEEeec--CCCEEEEeeCCCcEEEeeccCC
Q psy17902        231 KAPITGLAISFECDTLYSSSNDRSIKVWN---IEDRAYVETLFGHQSAITSLDILA--KNRVISSGGTDKSVRVWKIQEE  305 (454)
Q Consensus       231 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~  305 (454)
                      .+.+..+.......+|+.-+..|.++--.   +........+ .....|..+.. +  +..+++..+.+|.++...+..-
T Consensus        23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~  100 (276)
T 3no0_A           23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF  100 (276)
T ss_dssp             CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred             CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence            34555555555566777777888776543   3222111113 23455666644 4  4678888999999999887653


Q ss_pred             e-----EE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceee-ecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        306 S-----QL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI-PVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       306 ~-----~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                      .     ..  .+......+..........++..+..|.+..+....-.....- ........  .....|..+...+++.
T Consensus       101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L--~~~d~vv~~~~~~~~~  178 (276)
T 3no0_A          101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKL--EKNDETSGLRIWNGEP  178 (276)
T ss_dssp             TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEEEESSCS
T ss_pred             hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEcc--CCCCEEEEEEEeCCCC
Confidence            2     11  2222223333444445668888999999888865321111000 00000000  1123466666666677


Q ss_pred             EEEEecCCCcEEEEEcCCC-------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        378 LVASGSYDGCVKLWKITPK-------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       378 ~l~~~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      .|+..+..|.++...+..-       +-+..+   ...+.+..+....+...++.. +.+|.+..
T Consensus       179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~~~~~~~i~~~-t~~G~~ir  239 (276)
T 3no0_A          179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIPIKEEVELLIT-TKNGKAFY  239 (276)
T ss_dssp             EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEEESSEEEEEEE-ETTSCEEE
T ss_pred             EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEEeCCCCEEEEE-cCCCeEEE
Confidence            8888899999999887532       122222   123444444333333344444 46676666

>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1

Probab=87.57  E-value=14  Score=32.34  Aligned_cols=193  Identities=11%  Similarity=0.077  Sum_probs=106.4

Q ss_pred             CCCcEEEEecCCCcEEEEeCC-----CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC---CC------cee
Q psy17902        200 NNNELVASGDNNSNIKLWSSS-----LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI---ED------RAY  265 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~------~~~  265 (454)
                      |+..++++.+.+|.|+--.+.     +..-..++. .+.+..+........|+..+..|.++-+..   ..      |.+
T Consensus         3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~   81 (323)
T 1wp5_A            3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence            456678888899999876541     111122332 234545555556677888888898766554   21      222


Q ss_pred             EEEe-e-ccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCC-------eEE--EEccccCCeEEEEecCCCEEEEE
Q psy17902        266 VETL-F-GHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEE-------SQL--VFNGHSRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       266 ~~~~-~-~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~-------~~~--~~~~~~~~i~~~~~~~~~~l~~~  331 (454)
                      +..+ . .....|.++...++   +.+++.++..|.++...+...       ...  .+......+........+.++..
T Consensus        82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~  161 (323)
T 1wp5_A           82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV  161 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred             hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence            1111 1 12334555443332   567888899999998877421       111  22222222333334456778889


Q ss_pred             eCCCCEEEEecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCC
Q psy17902        332 GEDGTLSLWSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITP  395 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~  395 (454)
                      +.+|.+..+....-.+..... ......  ......|.++...+++. .|++.+..|..+..++..
T Consensus       162 T~~G~~irf~~~ev~~~gR~a~GV~~i~--L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e  225 (323)
T 1wp5_A          162 THNGYALWFDESEVSIVGVRAAGVKGMN--LKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE  225 (323)
T ss_dssp             ETTSEEEEEEGGGSCBCCSSCCCEECCC--CCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred             eCCCcEEEEEHHHCcccCCCCcCEEEEE--eCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence            999998888764322111100 000000  01223366665555555 788888889888887754

>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}

Probab=86.45  E-value=16  Score=31.97  Aligned_cols=194  Identities=9%  Similarity=0.051  Sum_probs=111.4

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCeEEEEEc---CCC------ceec-ccCCcccCCCCCCceEEEEEeC---CCcEEEEec
Q psy17902        143 ASITCIAVTSDSKHVYSACKDGIIIKWLL---ETR------SKVC-SSPFVKTDRKSYPPILALAVAN---NNELVASGD  209 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~---~~~------~~~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~  209 (454)
                      +.+..+........|+.-+..|.++....   ...      ..+. .+.+     .....|.++..-+   +..++++.+
T Consensus        42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l-----~~~e~i~~~~~~~~~~~e~~~v~~T  116 (327)
T 3uc1_A           42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAF-----QPEERIAQVIQIRGYTDAPYLVLAT  116 (327)
T ss_dssp             GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTC-----CTTCCEEEEEEESSTTSSSEEEEEE
T ss_pred             CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCC-----CCCCEEEEEEEeccCCCCCEEEEEc
Confidence            44555555555566777777887765543   221      1100 0111     2334566554433   477999999


Q ss_pred             CCCcEEEEeCCC--------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--Cc---------eeEEEee
Q psy17902        210 NNSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE--DR---------AYVETLF  270 (454)
Q Consensus       210 ~dg~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~---------~~~~~~~  270 (454)
                      .+|.++-..+..        .....+.. .+.+..+........|+..+..|.+..+.+.  .-         .....+.
T Consensus       117 ~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~  195 (327)
T 3uc1_A          117 RNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN  195 (327)
T ss_dssp             TTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC
T ss_pred             CCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC
Confidence            999999887611        11122333 3455555555566788888999998888776  21         1111222


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE-------E---EEccccCCe-EEEEecCCCEEEEEeCCCCEEE
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ-------L---VFNGHSRGI-DMTRRVNDQQFITCGEDGTLSL  339 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~---~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~i  339 (454)
                       ....|.++...+.+..|+..+..|.++.-.+..-..       +   .+......+ .+.....+..++..+.+|.+..
T Consensus       196 -~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir  274 (327)
T 3uc1_A          196 -IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIR  274 (327)
T ss_dssp             -TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEE
T ss_pred             -CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEE
Confidence             344566666666667888889999988877643211       1   121212223 3333345567778888888887


Q ss_pred             EecC
Q psy17902        340 WSIL  343 (454)
Q Consensus       340 wd~~  343 (454)
                      +...
T Consensus       275 ~~~~  278 (327)
T 3uc1_A          275 TAAR  278 (327)
T ss_dssp             EEGG
T ss_pred             Eehh
Confidence            7764

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=86.09  E-value=28  Score=34.36  Aligned_cols=236  Identities=9%  Similarity=0.058  Sum_probs=119.6

Q ss_pred             eEEEE-EcCCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCC-----CceEEEEEeCCCcEEEEec----
Q psy17902        145 ITCIA-VTSDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSY-----PPILALAVANNNELVASGD----  209 (454)
Q Consensus       145 V~~~~-~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~----  209 (454)
                      ...+. ++|++++++.+-+.     ..++++|+.+++.+..--. .  ....     .....++|..+..++++..    
T Consensus       131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~--~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~  207 (711)
T 4hvt_A          131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-P--ITNSGKLLEGKFTYPTWINKDTIIFNLVLHKN  207 (711)
T ss_dssp             EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-C--BCTTCCBCCEETCCEEEEETTEEEECCCCSTT
T ss_pred             EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-c--ccccccccccccceeeEECCCEEEEEeCCCCC
Confidence            34455 88999988765332     3899999999876642110 0  0111     0113346764444444321    


Q ss_pred             ------CCCcEEEEeCCC---ccEEeecccCCCe-EEEEEcCCCCE-----EEEEeC---CCcEEEEeCCC--ceeEEEe
Q psy17902        210 ------NNSNIKLWSSSL---EHLHTFTGHKAPI-TGLAISFECDT-----LYSSSN---DRSIKVWNIED--RAYVETL  269 (454)
Q Consensus       210 ------~dg~v~vw~~~~---~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---dg~i~iwd~~~--~~~~~~~  269 (454)
                            ....|+.|.+.+   .-...+......+ .+...++++.+     +++.+.   ...+.+.+...  +... .+
T Consensus       208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l  286 (711)
T 4hvt_A          208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KI  286 (711)
T ss_dssp             CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-EC
T ss_pred             CcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Ee
Confidence                  124688888722   2233343333333 33445666652     444332   24566666653  3322 22


Q ss_pred             eccCCceeEEEeecCCCEEEEe----------eCCCcEEEeeccCCe--------EEE-E-ccccCCeEEEEecCCCEEE
Q psy17902        270 FGHQSAITSLDILAKNRVISSG----------GTDKSVRVWKIQEES--------QLV-F-NGHSRGIDMTRRVNDQQFI  329 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~--------~~~-~-~~~~~~i~~~~~~~~~~l~  329 (454)
                      .....  ..+..+..+.+++..          ...+.|.+.++.++.        ... + ......+..+.+..+..++
T Consensus       287 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~  364 (711)
T 4hvt_A          287 NMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFL  364 (711)
T ss_dssp             CSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEE
T ss_pred             ecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEE
Confidence            21111  122334455555532          246678888887631        112 2 2223345556666677777


Q ss_pred             EEeCCCC--EEEEecCCCc-ccee-eecccCCCCCCCCCCcEEEEEEecCCC-EEEEecC---CCcEEEEEcC
Q psy17902        330 TCGEDGT--LSLWSILKKV-PTHT-IPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSY---DGCVKLWKIT  394 (454)
Q Consensus       330 ~~~~dg~--i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~---dg~v~iwd~~  394 (454)
                      +...++.  |.++++.++. .... +....        ...+..+.+++++. ++++.+.   -+.+..+|+.
T Consensus       365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~--------~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~  429 (711)
T 4hvt_A          365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPY--------QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT  429 (711)
T ss_dssp             EEEETTEEEEEEECEETTEECCCEEECCCS--------TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred             EEEECCEEEEEEEECCCCceEEEeccCCCC--------CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence            7777764  6667765553 2222 22211        12266666667665 4444332   3567777765

>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}

Probab=84.38  E-value=3.5  Score=39.50  Aligned_cols=60  Identities=17%  Similarity=0.201  Sum_probs=44.3

Q ss_pred             EEEEEEecCCCEEEEecCC------------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        367 ITSVACLHNSDLVASGSYD------------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                      .-.|+|+|.|+++++-..+            ..+.+.+..+++..+.+.. +....++.++|+||++.|++..
T Consensus       478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvni  549 (592)
T 3zwu_A          478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVGI  549 (592)
T ss_dssp             EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEEE
T ss_pred             CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEEE
Confidence            6779999999977765432            2355556666666655554 4678899999999999998874

>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}

Probab=83.31  E-value=37  Score=33.48  Aligned_cols=222  Identities=10%  Similarity=0.055  Sum_probs=109.1

Q ss_pred             EEEE-EeCCCcEEEEecC-----CCcEEEEeCCCc-cEE-eec-ccCC------CeEEEEEcCCCCEEEEEe--------
Q psy17902        194 LALA-VANNNELVASGDN-----NSNIKLWSSSLE-HLH-TFT-GHKA------PITGLAISFECDTLYSSS--------  250 (454)
Q Consensus       194 ~~~~-~~~~~~~l~~~~~-----dg~v~vw~~~~~-~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~~--------  250 (454)
                      ..+. ++|++++++.+-+     -..++++|+..+ .+. .+. .-..      ....++|..+. .++.+.        
T Consensus       132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~  210 (711)
T 4hvt_A          132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEIT  210 (711)
T ss_dssp             EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBC
T ss_pred             eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcC
Confidence            3444 7888887766422     247899999443 331 111 0000      11345787444 444432        


Q ss_pred             ---CCCcEEEEeCCCce--eEEEeeccCCce-eEEEeecCCC-----EEEEeeCC---CcEEEeeccC--CeEEEEcccc
Q psy17902        251 ---NDRSIKVWNIEDRA--YVETLFGHQSAI-TSLDILAKNR-----VISSGGTD---KSVRVWKIQE--ESQLVFNGHS  314 (454)
Q Consensus       251 ---~dg~i~iwd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~~d---g~i~i~d~~~--~~~~~~~~~~  314 (454)
                         ....|+.|.+.+..  -...+.+....+ .+...++++.     .+++.+.+   ..+++.++..  +....+....
T Consensus       211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  290 (711)
T 4hvt_A          211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS  290 (711)
T ss_dssp             TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred             cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence               12468888876642  223343333332 2344455655     24443322   3456666543  3323222211


Q ss_pred             CCeEEEEecCCCEEEEE----------eCCCCEEEEecCCCcc-------ceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        315 RGIDMTRRVNDQQFITC----------GEDGTLSLWSILKKVP-------THTIPVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       315 ~~i~~~~~~~~~~l~~~----------~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                       ....+....+.+++..          ...+.|.+.++.+...       ...+- .+.      ....+..+.+..+ .
T Consensus       291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~l~~~~~~~~-~  361 (711)
T 4hvt_A          291 -DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF-TPT------ANEVFNFISTTKD-R  361 (711)
T ss_dssp             -TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE-CCC------TTEEEEEEEECSS-C
T ss_pred             -cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE-CCC------CCCeEEEEEEECC-E
Confidence             2222333344333322          2467888888866421       11211 111      1234778888865 5


Q ss_pred             EEEEecCCCc--EEEEEcCCCc-eeeE-eccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        378 LVASGSYDGC--VKLWKITPKR-TLEF-LQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       378 ~l~~~~~dg~--v~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ++++...++.  |.++++.++. .... +.. +..+.+..+.+++++..++..
T Consensus       362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~l-p~~~~~~~~~~~~~~~~~~~~  413 (711)
T 4hvt_A          362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKL-PYQNAIFGMSSYEEEEEALIT  413 (711)
T ss_dssp             EEEEEEETTEEEEEEECEETTEECCCEEECC-CSTTCEEEEECCTTCSCEEEE
T ss_pred             EEEEEEECCEEEEEEEECCCCceEEEeccCC-CCCeEEEEEeecCcCCEEEEE
Confidence            7777777764  6677776664 2333 322 223456667777777655443

>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}

Probab=81.06  E-value=30  Score=30.88  Aligned_cols=144  Identities=10%  Similarity=0.055  Sum_probs=85.2

Q ss_pred             eCCCcEEEEecCCCcEEEEeCC----------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC---CC---
Q psy17902        199 ANNNELVASGDNNSNIKLWSSS----------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI---ED---  262 (454)
Q Consensus       199 ~~~~~~l~~~~~dg~v~vw~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~---  262 (454)
                      -|+..++++.+.+|.|+--.+.          +..-..++ ....+..+........|+..+..|.++-+..   ..   
T Consensus         4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r   82 (370)
T 3l6v_A            4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS   82 (370)
T ss_dssp             CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred             ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence            3567788999999999876541          11222333 3456666666666677888888898776543   21   


Q ss_pred             ---ceeEEEe-e-ccCCceeEEEeec---CCCEEEEeeCCCcEEEeeccCCe------EE--EEccccCCeEEEEecCCC
Q psy17902        263 ---RAYVETL-F-GHQSAITSLDILA---KNRVISSGGTDKSVRVWKIQEES------QL--VFNGHSRGIDMTRRVNDQ  326 (454)
Q Consensus       263 ---~~~~~~~-~-~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~------~~--~~~~~~~~i~~~~~~~~~  326 (454)
                         |..+..+ . .....|.++....   .+.+|+.++..|.++...+....      ..  .+......+.........
T Consensus        83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~  162 (370)
T 3l6v_A           83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR  162 (370)
T ss_dssp             TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred             ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence               2222111 0 1234555554432   35688889999999988764321      11  222222233444444566


Q ss_pred             EEEEEeCCCCEEEEecC
Q psy17902        327 QFITCGEDGTLSLWSIL  343 (454)
Q Consensus       327 ~l~~~~~dg~i~iwd~~  343 (454)
                      .++..+..|.+..+...
T Consensus       163 ~i~l~T~~G~~irf~~~  179 (370)
T 3l6v_A          163 DVLLFASNGKTVRFGES  179 (370)
T ss_dssp             EEEEEETTSEEEEEEGG
T ss_pred             eEEEEeCCCeEEEEEcc
Confidence            78888899988888763

>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*

Probab=80.88  E-value=7.7  Score=36.78  Aligned_cols=62  Identities=15%  Similarity=0.158  Sum_probs=43.9

Q ss_pred             cEEEEEEecCCCEEEEecC------------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        366 WITSVACLHNSDLVASGSY------------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       366 ~i~~~~~s~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ....|.|+++|.+.++...            ...|..++..+++....+.. +....++.++|+||++.|+++.-
T Consensus       477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~vQ  550 (592)
T 4a9v_A          477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVGIQ  550 (592)
T ss_dssp             CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEEEE
T ss_pred             CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEEEe
Confidence            3788999999997773322            12566666666766555543 34567999999999999998853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	454
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-25
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-18
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	1e-18
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-23
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	3e-18
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-17
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	6e-12
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	5e-18
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	6e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-08
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-17
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-17
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-16
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	1e-10
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-17
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-15
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	2e-11
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	6e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-16
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	5e-15
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-12
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	2e-10
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	4e-13
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-11
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-09
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	6e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	6e-13
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	3e-12
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	8e-08
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-06
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-05
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-13
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	6e-08
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	2e-07
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	4e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.001
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	3e-12
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	8e-09
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	4e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-11
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	4e-07
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	3e-06
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	0.001
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	2e-10
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	8e-07
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	9e-10
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-09
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-06
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	6e-06
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-09
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.001
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	0.002
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-09
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	6e-07
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	7e-06
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	8e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	2e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	2e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-07
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	1e-06
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	4e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	8e-06
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	2e-05
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	4e-05
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	6e-04
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	0.002
d1q7fa_	279	b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (D	0.002
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	0.004
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	0.004

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  102 bits (253), Expect = 7e-25
 Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 68/311 (21%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS--------------------- 179
           HR+ +T +        + SA +D  I  W  ET     +                     
Sbjct: 16  HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75

Query: 180 ----------------SPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH 223
                                     +       + N + +V++  + +       +   
Sbjct: 76  SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135

Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD--- 280
           + TFTGH+  +  +  + +   + S SND++++VW +  +     L  H+  +  +    
Sbjct: 136 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAP 195

Query: 281 -----------------ILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGI-DMTR 321
                                   + SG  DK++++W +     L    GH   +  +  
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 255

Query: 322 RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381
               +  ++C +D TL +W    K    T+  AH         +++TS+     +  V +
Sbjct: 256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AH--------EHFVTSLDFHKTAPYVVT 306

Query: 382 GSYDGCVKLWK 392
           GS D  VK+W+
Sbjct: 307 GSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.4 bits (207), Expect = 1e-18
 Identities = 51/267 (19%), Positives = 91/267 (34%), Gaps = 57/267 (21%)

Query: 215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS 274
           K W       +  +GH++P+T +        + S+S D +IKVW+ E   +  TL GH  
Sbjct: 1   KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60

Query: 275 AITSL------------------------------------------DILAKNRVISSGG 292
           ++  +                                           I+     I S  
Sbjct: 61  SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120

Query: 293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHT 350
            DK++++W++Q    +  F GH   + M R   D     +C  D T+ +W +  K     
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180

Query: 351 IP-----------VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
           +                  SS SE     +         + SGS D  +K+W ++    L
Sbjct: 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 240

Query: 400 EFLQDIPLSGVINSLVFTSDHKHLVAG 426
             L        +  ++F S  K +++ 
Sbjct: 241 MTLVG--HDNWVRGVLFHSGGKFILSC 265

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.0 bits (206), Expect = 1e-18
 Identities = 42/231 (18%), Positives = 90/231 (38%), Gaps = 29/231 (12%)

Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP 192
                   H  +++ +++  +  H+ SA +D  I  W ++T   V +    +   +   P
Sbjct: 92  ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 151

Query: 193 ILALAVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDT------ 245
                   +  L+AS  N+  +++W  ++ E       H+  +  ++ + E         
Sbjct: 152 ------NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 205

Query: 246 --------------LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
                         L S S D++IK+W++     + TL GH + +  +   +  + I S 
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265

Query: 292 GTDKSVRVWKIQEESQL-VFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLW 340
             DK++RVW  + +  +   N H   +  +         +T   D T+ +W
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 97.1 bits (240), Expect = 6e-23
 Identities = 60/358 (16%), Positives = 125/358 (34%), Gaps = 75/358 (20%)

Query: 84  LEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRA 143
           L +  +  K ++ D++       L  +    +   R+ +  R            G  H A
Sbjct: 7   LRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRR--------TLRG--HLA 56

Query: 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203
            I  +   +DS+ + SA +DG +I W         ++  V         ++  A A +  
Sbjct: 57  KIYAMHWGTDSRLLVSASQDGKLIIW------DSYTTNKVHAIPLRSSWVMTCAYAPSGN 110

Query: 204 LVASGDNNSNIKLWSSSLEHL--------------------------------------- 224
            VA G  ++   +++                                             
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170

Query: 225 -------HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
                   TFTGH   +  L+++ +     S + D S K+W++ +    +T  GH+S I 
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230

Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV----NDQQFITCGE 333
           ++         ++G  D + R++ ++ + +L+   H   I     V    + +  +   +
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290

Query: 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
           D   ++W  LK      +   H         N ++ +    +   VA+GS+D  +K+W
Sbjct: 291 DFNCNVWDALKADRAGVLA-GH--------DNRVSCLGVTDDGMAVATGSWDSFLKIW 339

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 83.6 bits (205), Expect = 3e-18
 Identities = 17/122 (13%), Positives = 43/122 (35%), Gaps = 5/122 (4%)

Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
             H + I  I    +     +   D     +      +        +       I +++ 
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF----DLRADQELMTYSHDNIICGITSVSF 278

Query: 199 ANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV 257
           + +  L+ +G ++ N  +W     +      GH   ++ L ++ +   + + S D  +K+
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338

Query: 258 WN 259
           WN
Sbjct: 339 WN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.7 bits (200), Expect = 1e-17
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 5/147 (3%)

Query: 200 NNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV- 257
            +  L  SG  +++ KLW         TFTGH++ I  +      +   + S+D + ++ 
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253

Query: 258 -WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR 315
               +      +       ITS+      R++ +G  D +  VW   +  +  V  GH  
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313

Query: 316 GI-DMTRRVNDQQFITCGEDGTLSLWS 341
            +  +    +     T   D  L +W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.4 bits (155), Expect = 6e-12
 Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 56/253 (22%)

Query: 221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD 280
           +    T  GH A I  +    +   L S+S D  + +W+      V  +    S + +  
Sbjct: 45  MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104

Query: 281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG---------------------IDM 319
                  ++ GG D    ++ ++     V                             D 
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164

Query: 320 TRRVN--------------------------DQQFITCGEDGTLSLWSILKKVPTHTIPV 353
           T  +                            + F++   D +  LW + + +   T   
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT- 223

Query: 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS 413
            H         + I ++    N +  A+GS D   +L+ +   + L       +   I S
Sbjct: 224 GH--------ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275

Query: 414 LVFTSDHKHLVAG 426
           + F+   + L+AG
Sbjct: 276 VSFSKSGRLLLAG 288

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (201), Expect = 5e-18
 Identities = 48/287 (16%), Positives = 104/287 (36%), Gaps = 44/287 (15%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV----------------------- 177
               + C+    D + + S  +D  I  W   T                           
Sbjct: 14  TSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG 71

Query: 178 ---------CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS----SSLEHL 224
                      +     +   +     L +  NN ++ +   + +I +W     + +   
Sbjct: 72  SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131

Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
               GH+A +    + F+   + S+S DR+IKVWN     +V TL GH+  I  L    +
Sbjct: 132 RVLVGHRAAVNV--VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--R 187

Query: 285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK 344
           +R++ SG +D ++R+W I+  + L        +    R ++++ ++   DG + +W ++ 
Sbjct: 188 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247

Query: 345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
            +            +       +  +    +   + S S+D  + +W
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQ--FDEFQIVSSSHDDTILIW 292

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (130), Expect = 6e-09
 Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 54/221 (24%)

Query: 220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSL 279
           SL+ +H  +     +    + ++   + S   D +IK+W+         L GH  ++  L
Sbjct: 4   SLQRIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61

Query: 280 DILAKNRVISSGG--------------------------------------TDKSVRVWK 301
               +  +  S                                         D+S+ VW 
Sbjct: 62  QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121

Query: 302 IQEESQLVFN---GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358
           +   + +         R        +D+  ++   D T+ +W+        T+       
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL------- 174

Query: 359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
                 +        +   LV SGS D  ++LW I     L
Sbjct: 175 ----NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 211

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (123), Expect = 4e-08
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 20/117 (17%)

Query: 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS 212
             + V S   D  I  W +E  + +      +   +            +N+ + SG  + 
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--------FDNKRIVSGAYDG 238

Query: 213 NIKLWS----------SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
            IK+W           +    L T   H   +    + F+   + SSS+D +I +W+
Sbjct: 239 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIWD 293

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (201), Expect = 1e-17
 Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 29/281 (10%)

Query: 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI 193
              +       I  +  + D K + +  +D +I  W +E R  V      + D  S    
Sbjct: 113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF 172

Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
                 + ++LV+   + +       + +   T +      T      +   + + S DR
Sbjct: 173 -----PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 227

Query: 254 SIKVWNIEDRAYVETLF-------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES 306
           +++VW+ E    VE L        GH+ ++ S+      + + SG  D+SV++W +Q  +
Sbjct: 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287

Query: 307 QLVFNGHSRGIDMTRRV--------------NDQQFITCGEDGTLSLWSILKKVPTHTIP 352
               +                          ND+  ++  +D  +  W      P   + 
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347

Query: 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393
              G+ +S          +     ++ A+GS D   ++WK 
Sbjct: 348 ---GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 81.4 bits (199), Expect = 2e-17
 Identities = 52/314 (16%), Positives = 115/314 (36%), Gaps = 28/314 (8%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR-----------SKVCSSPFVKTDRKS 189
           H + + C+  ++D +++ + C     +  + +             +K   +    +   S
Sbjct: 61  HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120

Query: 190 YPPILALAVANNNELVASG-DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYS 248
              I ++  + + + +A+G ++         + + +    GH+  I  L      D L S
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180

Query: 249 SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ----- 303
            S DR++++W++       TL       T        + I++G  D++VRVW  +     
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240

Query: 304 ---EESQLVFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD- 358
              +       GH   +  +    + Q  ++   D ++ LW++            +    
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300

Query: 359 --SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI---TPKRTLEFLQDIPLS-GVIN 412
             +     +++ SVA   N + + SGS D  V  W      P   L+  ++  +S  V N
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360

Query: 413 SLVFTSDHKHLVAG 426
                 ++     G
Sbjct: 361 GSSLGPEYNVFATG 374

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.9 bits (190), Expect = 3e-16
 Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 20/192 (10%)

Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP- 191
                        T      D K++ +   D  +  W  ET   V            +  
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255

Query: 192 PILALAVANNNELVASGDNNSNIKLWS-------------SSLEHLHTFTGHKAPITGLA 238
            + ++    + + V SG  + ++KLW+             +S     T+ GHK  +  +A
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315

Query: 239 ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL------AKNRVISSGG 292
            +   + + S S DR +  W+ +    +  L GH++++ S+ +        +  V ++G 
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375

Query: 293 TDKSVRVWKIQE 304
            D   R+WK ++
Sbjct: 376 GDCKARIWKYKK 387

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (145), Expect = 1e-10
 Identities = 45/260 (17%), Positives = 83/260 (31%), Gaps = 22/260 (8%)

Query: 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLE-----HLHTFTGHKAPITGLAISFE 242
           K  PP L    + +         N    L++ +L       LH    H + +  +  S +
Sbjct: 14  KPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSND 73

Query: 243 CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV--- 299
            + L +   +++ +V+ + D + V  L    +A    + L  +   SS    +SV     
Sbjct: 74  GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 132

Query: 300 --------WKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
                            + N     I      +            L   S  + V    +
Sbjct: 133 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 192

Query: 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL---- 407
                  + S E    T      +   +A+GS D  V++W       +E L         
Sbjct: 193 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 252

Query: 408 -SGVINSLVFTSDHKHLVAG 426
               + S+VFT D + +V+G
Sbjct: 253 HKDSVYSVVFTRDGQSVVSG 272

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (194), Expect = 6e-17
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 16/195 (8%)

Query: 205 VASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR 263
           V SG  +  +K+W   +   LHT  GH   +    + F+   + S S D SI+VW++E  
Sbjct: 150 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDVETG 207

Query: 264 AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN---GHSRGIDMT 320
             + TL GHQS  + +++  K+ ++ SG  D +V++W I+    L         +     
Sbjct: 208 NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265

Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
            + N    IT  +DGT+ LW +        +        S      +  +   +   + A
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE----SGGSGGVVWRIRASNTKLVCA 321

Query: 381 SGSYDGC----VKLW 391
            GS +G     + + 
Sbjct: 322 VGSRNGTEETKLLVL 336

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (179), Expect = 6e-15
 Identities = 57/323 (17%), Positives = 107/323 (33%), Gaps = 51/323 (15%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLET----------RSKVCSSPF-------- 182
           H   +    +      + S   D  +  W   T             V SS          
Sbjct: 15  HDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISG 73

Query: 183 ----------------VKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHT 226
                           + T       +  + +     +  S D    +    +  + LH 
Sbjct: 74  STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG-QCLHV 132

Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
             GH A +    + ++   + S + D  +KVW+ E    + TL GH + + SL       
Sbjct: 133 LMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 188

Query: 287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV 346
            + SG  D S+RVW ++  + +      + +     + D   ++   D T+ +W I    
Sbjct: 189 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248

Query: 347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI---TPKRTLEFLQ 403
              T+   + + S+ +   +        N + V + S DG VKLW +      R L  L+
Sbjct: 249 CLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300

Query: 404 DIPLSGVINSLVFTSDHKHLVAG 426
                GV+  +  ++       G
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVG 323

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 53/243 (21%)

Query: 217 WS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA 275
           W    L+      GH   +    + F  + + S S+D ++KVW+      + TL GH   
Sbjct: 1   WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59

Query: 276 ITSLDI--------------------------------------LAKNRVISSGGTDKSV 297
           + S  +                                          + + SG  D ++
Sbjct: 60  VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119

Query: 298 RVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY 357
           RVW I+    L             + + ++ ++   D  + +W    +   HT+      
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL------ 173

Query: 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417
                + +     +   +   V SGS D  +++W +     +  L       + + +   
Sbjct: 174 -----QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMELK 226

Query: 418 SDH 420
            + 
Sbjct: 227 DNI 229

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (147), Expect = 6e-11
 Identities = 48/292 (16%), Positives = 102/292 (34%), Gaps = 54/292 (18%)

Query: 197 AVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAIS--------------- 240
            +      + SG +++ +K+WS  + + L T  GH   +    +                
Sbjct: 22  CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81

Query: 241 -----------------------FECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
                                       + S S D +++VW+IE    +  L GH +A+ 
Sbjct: 82  WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141

Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGT 336
            +    +  V  +   D  V+VW  + E+ L    GH+     + + +    ++   D +
Sbjct: 142 CVQYDGRRVVSGAY--DFMVKVWDPETETCLHTLQGHTN-RVYSLQFDGIHVVSGSLDTS 198

Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
           + +W +      HT+       S                 +++ SG+ D  VK+W I   
Sbjct: 199 IRVWDVETGNCIHTLTGHQSLTSGME-----------LKDNILVSGNADSTVKIWDIKTG 247

Query: 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAI 448
           + L+ LQ         + +  + +  + +      +    KT + ++N V +
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 78.7 bits (192), Expect = 1e-16
 Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 22/281 (7%)

Query: 192 PILALAVANNNELVASGDNNSNIKLW---SSSLEHLHTFTGHKAPITGLAISFECDTLYS 248
           PI   A   +   +A   NN  + ++    +    +H    H   +TG+  + + + + +
Sbjct: 9   PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68

Query: 249 SSNDRSIKVWNIEDRAYVETLFGH--QSAITSLDILAKNRVISSGGTDKSVRVWKIQEES 306
              DR+  VW ++ R +  TL       A   +      +  + G   + + +   ++E+
Sbjct: 69  CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128

Query: 307 QLVFNGHSRGI------DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG---- 356
                 H +         +    N         D    ++S   K               
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188

Query: 357 -----YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI 411
                   SSS   W+  V    N   VA  S+D  V L     K  +  L    L   +
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP--L 246

Query: 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
            ++ F ++   + AG         + +  G  +    +D+ 
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP 287

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 74.1 bits (180), Expect = 5e-15
 Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 5/176 (2%)

Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--VETLFGHQSAITSLDIL 282
           H+F     PI+  A + +   +    N+  + ++      +  V  L  H   +T +D  
Sbjct: 3   HSF--LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60

Query: 283 AKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI 342
             +  I + GTD++  VW ++  +        R     R V           G+ S    
Sbjct: 61  PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 120

Query: 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
           +                     + + S+    NS L+A+GS D   +++    K  
Sbjct: 121 ICYFEQEN-DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.5 bits (155), Expect = 6e-12
 Identities = 37/330 (11%), Positives = 89/330 (26%), Gaps = 30/330 (9%)

Query: 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203
            I+C A   D   +     +  +  +       V      + +      +  +  A ++ 
Sbjct: 9   PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG----QVTGVDWAPDSN 64

Query: 204 LVASGDNNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
            + +   + N  +W+      +              +  +         S  R I +   
Sbjct: 65  RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124

Query: 261 ----EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG 316
               +           +S + SLD    + ++++G  D   R++    +        +  
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184

Query: 317 IDMTRRVNDQQFITCGEDGTLSL-----------WSILKKVPTHTIPVAHGYDSSSSEPN 365
                        +        +            S    V            + +SE  
Sbjct: 185 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL 244

Query: 366 WITSVACLHNSDLVASGSYDGCVKLW-------KITPKRTLEFLQDIPLSGVINSLVFTS 418
            + +V  +  S LVA+G  D    L+       K++    L+  +     G+     F +
Sbjct: 245 PLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 303

Query: 419 DHKHLVAGIGTEHRFGRWKTIKGVKNTVAI 448
             K   +        G     K   + +++
Sbjct: 304 LDKKASSEGSAAAGAGLDSLHKNSVSQISV 333

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 59.5 bits (142), Expect = 2e-10
 Identities = 35/341 (10%), Positives = 93/341 (27%), Gaps = 59/341 (17%)

Query: 120 VNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS 179
           V+I ++  N  V   +     H   +T +    DS  + +   D     W L+ R+   +
Sbjct: 31  VHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 88

Query: 180 SPFVKTDRKSYPPILALAVANNNELVASGDNN-SNIKLWSSSLEHLHTFTGHKAPITGLA 238
              ++ +R +     A           S   +    +  +      H     ++ +  L 
Sbjct: 89  LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 148

Query: 239 ISFECDTLYSSSNDRSIKVWNIEDRA------------------YVETLFGHQSAITSLD 280
                  L + S D   ++++   +                    +         +  + 
Sbjct: 149 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 208

Query: 281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG-IDMTRRVNDQQFITCGEDGTLSL 339
             A    ++    D +V +    ++  +         +     + +   +  G D    L
Sbjct: 209 FSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVL 268

Query: 340 WS------ILKKVPTHTIPVAHGYDSSSSE--------------------------PNWI 367
           ++       L       +P        ++                            N +
Sbjct: 269 FTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV 328

Query: 368 TSVACLHNSD----LVASGSYDGCVKLWKI-TPKRTLEFLQ 403
           + ++ L           +   DG + +W + + +  L+ L+
Sbjct: 329 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLK 369

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.8 bits (104), Expect = 1e-05
 Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)

Query: 356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV 415
            Y S   EP  I+  A   +   +A    +  V +++ +  + ++  +    +G +  + 
Sbjct: 1   AYHSFLVEP--ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVD 58

Query: 416 FTSDHKHLVAG 426
           +  D   +V  
Sbjct: 59  WAPDSNRIVTC 69

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (164), Expect = 4e-13
 Identities = 48/289 (16%), Positives = 100/289 (34%), Gaps = 17/289 (5%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
           H   +  + +++ ++HVY+  K  + +  +    +K   S     +R +Y  I +  +  
Sbjct: 50  HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNY--IRSCKLLP 107

Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITG---LAISFECDTLYSSSNDRSIKV 257
           +   +  G   S + +W  +           +       LAIS +    +S  +D +I V
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167

Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI 317
           W++ ++  V    GH    + +DI      + +GG D +VR W ++E  QL  +  +  I
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227

Query: 318 DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD 377
                      +     G      +                      + + S+   +   
Sbjct: 228 FS---------LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278

Query: 378 LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
              S   D  +  W+         +     S  + S   + D K++V G
Sbjct: 279 WFVSTGKDNLLNAWRT---PYGASIFQSKESSSVLSCDISVDDKYIVTG 324

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (151), Expect = 2e-11
 Identities = 29/261 (11%), Positives = 80/261 (30%), Gaps = 15/261 (5%)

Query: 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI 193
           ++ +       I    +  D   +    +   +  W     +        +    +    
Sbjct: 89  SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW---DLAAPTPRIKAELTSSAPACY 145

Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
                 ++    +   + +       +   +  F GH    + + IS +   L++   D 
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205

Query: 254 SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
           +++ W++ +           S I SL        ++ G    +V V  + +  +   + H
Sbjct: 206 TVRSWDLREG-RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH 264

Query: 314 SRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
              +   +     + F++ G+D  L+ W                      E + + S   
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----------ESSSVLSCDI 314

Query: 373 LHNSDLVASGSYDGCVKLWKI 393
             +   + +GS D    ++++
Sbjct: 315 SVDDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (134), Expect = 2e-09
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 2/138 (1%)

Query: 207 SGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266
           +G  ++ ++ W              + I  L          +   + S       ++   
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDK 258

Query: 267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI-DMTRRVND 325
             L  H+S + SL      +   S G D  +  W+    + +  +  S  +      V+D
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDD 318

Query: 326 QQFITCGEDGTLSLWSIL 343
           +  +T   D   +++ ++
Sbjct: 319 KYIVTGSGDKKATVYEVI 336

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (97), Expect = 8e-05
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 9/114 (7%)

Query: 227 FTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
           F G     P     ++ +           ++    I   A       H   + ++ I   
Sbjct: 3   FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP 62

Query: 285 NRVISSGGTDKSVRVWKIQEE------SQLVFNGHSRGIDMTRRVNDQQFITCG 332
            R + +GG    V+VW I         SQL        I   + + D   +  G
Sbjct: 63  TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 6e-04
 Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 5/115 (4%)

Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-GHSRGIDMTRRVNDQQFITCGEDGT 336
           S  + A  ++        ++    I   ++ +    H   +      N  + +  G  G 
Sbjct: 14  SFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGC 73

Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
           + +W I        +      +      N+I S   L +   +  G     + +W
Sbjct: 74  VKVWDISHPGNKSPVSQLDCLNRD----NYIRSCKLLPDGCTLIVGGEASTLSIW 124

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.6 bits (163), Expect = 6e-13
 Identities = 45/348 (12%), Positives = 96/348 (27%), Gaps = 63/348 (18%)

Query: 138 GKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALA 197
           GK H A I  ++  +      S   DG +  W  +            +       +  + 
Sbjct: 10  GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67

Query: 198 V-------ANNNELVASGDNNSNIKLWS-----------SSLEHLHTFTGHKAPITGLAI 239
           V       A    LVA+   + ++  +                 L      K     L  
Sbjct: 68  VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127

Query: 240 SFECD-----TLYSSSNDRSIKVWNI------------------EDRAYVETLFGHQSAI 276
               D      L ++    +  +W                    E +  VE+        
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187

Query: 277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI--------DMTRRVNDQQF 328
           TS+DI ++  +I++G  + +V++ ++     L        +         +         
Sbjct: 188 TSVDI-SERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246

Query: 329 ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP-------NWITSVACLHNSDLVAS 381
               +  +    ++ +      I        SS          +W+ S++   + + + S
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306

Query: 382 GSYDGCVKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
             +DG ++ W +       TL    D  +    + L        L   
Sbjct: 307 AGWDGKLRFWDVKTKERITTLNMHCD-DIEIEEDILAVDEHGDSLAEP 353

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.6 bits (158), Expect = 3e-12
 Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 42/206 (20%)

Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR------AYVETLFGHQSAITS 278
           +    H A I  ++         S S D  +KVW+ +            + F H+S +  
Sbjct: 8   NAGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65

Query: 279 LDILA-------KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTR---------- 321
           +D+L        +  ++++      +  ++I  E +       +   +            
Sbjct: 66  VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125

Query: 322 -------RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY---------DSSSSEPN 365
                  R+   + +     GT  +W              +           +S  +   
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185

Query: 366 WITSVACLHNSDLVASGSYDGCVKLW 391
           + TSV       L+A+G  +G V++ 
Sbjct: 186 FATSVDISERG-LIATGFNNGTVQIS 210

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 8e-08
 Identities = 26/218 (11%), Positives = 70/218 (32%), Gaps = 29/218 (13%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
                T + ++     + +   +G +    L T   + +     +   +   I ++  + 
Sbjct: 183 PSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 241

Query: 201 NNELVASGDNNSNIKLW-----------------SSSLEHLHTFTGHKAPITGLAISFEC 243
              L+A   ++++                     + S +       H + +  L+ +   
Sbjct: 242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 301

Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSL-DILAKNRVISSGGTDKSVRVWKI 302
           +TL S+  D  ++ W+++ +  + TL  H   I    DILA +    S        V  +
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361

Query: 303 QEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLW 340
           ++  +                 ++       D ++  +
Sbjct: 362 KKGWRSGMGADL----------NESLCCVCLDRSIRWF 389

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.2 bits (110), Expect = 2e-06
 Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 23/152 (15%)

Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-------EESQLVFNGHSRGID 318
                 H + I S+     N    S   D  ++VW  +       ++       H  G+ 
Sbjct: 7   ANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64

Query: 319 MTRRV--------NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD-SSSSEPNWITS 369
               +              T    G L  + I ++  T  +         S  + +   +
Sbjct: 65  HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124

Query: 370 VACLHNSD-----LVASGSYDGCVKLWKITPK 396
           +    ++D      + +    G   +WK  P 
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 156

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368
               H   I  +    +   ++C  DG L +W        +    ++ +    S  + + 
Sbjct: 9   AGKAHDADI-FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67

Query: 369 SVACLHNSD----LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSL 414
            +  +        LVA+ S+ G +  ++IT +   + +    L  + + +
Sbjct: 68  VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM 117

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.6 bits (163), Expect = 6e-13
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 4/154 (2%)

Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
            T  GH   +    + FE + + + ++D+ I+V++  ++ ++  L GH   + +L     
Sbjct: 6   TTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64

Query: 285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRG---IDMTRRVNDQQFITCGEDGTLSLWS 341
             ++S             +     VF GH+     +D+    N +  +T   D TL +W 
Sbjct: 65  GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124

Query: 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
           + K+         H Y      P        +  
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.8 bits (122), Expect = 6e-08
 Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%)

Query: 197 AVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
            +   +  V +G ++  I+++   + + L   +GH   +  L  +     L S S DR++
Sbjct: 18  CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA-HGGILVSGSTDRTV 76

Query: 256 KVWNIEDRAYVETLFGHQSA--ITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
           +VW+I+         GH S      +      + I +G  D ++ VWK+ +ES +  +G 
Sbjct: 77  RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136

Query: 314 SRGIDMTRRVNDQQFITCG 332
                +     ++     G
Sbjct: 137 EHDYPLVFHTPEENPYFVG 155

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.3 bits (118), Expect = 2e-07
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 11/175 (6%)

Query: 217 WSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI 276
             + ++ L+  +GH   I       E     S+S D +I++W++E+   + TL GH + +
Sbjct: 187 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 246

Query: 277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGT 336
             L +  K  V ++                    + +   I           +  G +  
Sbjct: 247 GLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY--VSDNILVSGSENQ 304

Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
            +++++      H   +           + I SV       LVA+   DG   L 
Sbjct: 305 FNIYNLRSGKLVHANILKDA--------DQIWSVN-FKGKTLVAAVEKDGQSFLE 350

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (92), Expect = 4e-04
 Identities = 34/304 (11%), Positives = 79/304 (25%), Gaps = 43/304 (14%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
           H   +  +        V  +    + +  + +            T R             
Sbjct: 52  HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE-----YK 106

Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN--------- 251
           N + + +G  ++ + +W    E      G +     +  + E +  +             
Sbjct: 107 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166

Query: 252 -------------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVR 298
                        D ++ VW++     +  L GH   I S     + +   S   D ++R
Sbjct: 167 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR 226

Query: 299 VWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358
           +W               G  M         +         L S                 
Sbjct: 227 IWD-----------LENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR 275

Query: 359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL--SGVINSLVF 416
             S     ++++   + SD +     +    ++ +   R+ + +    L  +  I S+ F
Sbjct: 276 KFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL---RSGKLVHANILKDADQIWSVNF 332

Query: 417 TSDH 420
               
Sbjct: 333 KGKT 336

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.9 bits (91), Expect = 5e-04
 Identities = 8/87 (9%), Positives = 25/87 (28%), Gaps = 2/87 (2%)

Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSR 315
              +   Y      H + ++++     +  I   G++    ++ ++  +         + 
Sbjct: 266 RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD 325

Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSI 342
            I               +DG   L  +
Sbjct: 326 QIWSVNFKGKTLVAAVEKDGQSFLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 9/89 (10%)

Query: 307 QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366
           +    GH   +    +  D   IT  +D  + ++  + K     +   H           
Sbjct: 5   RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHD--------GG 55

Query: 367 ITSVACLHNSDLVASGSYDGCVKLWKITP 395
           + ++   H   LV+  +            
Sbjct: 56  VWALKYAHGGILVSGSTDRTVRVWDIKKG 84

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.0 bits (86), Expect = 0.002
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 370 VACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428
           + CL    + V +G+ D  ++++    K+ L  L      G + +L +      +     
Sbjct: 16  ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGGILVSGSTD 73

Query: 429 TEHRFGRWKT 438
              R    K 
Sbjct: 74  RTVRVWDIKK 83

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.3 bits (157), Expect = 3e-12
 Identities = 31/336 (9%), Positives = 91/336 (27%), Gaps = 30/336 (8%)

Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
           +  +  I+ I +      +     DG +  +  + ++K      +    +   P+L    
Sbjct: 8   QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD---LLQSLRYKHPLLCCNF 64

Query: 199 ANNNELV---ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
            +N +L     +            S                    +  D L ++S D  I
Sbjct: 65  IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124

Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT------DKSVRVWKIQEESQLV 309
           +V +  +         + ++  +        + ++         +  V+ +++       
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184

Query: 310 FNGHSRGIDMTRRV------NDQQFITCGEDGTLSLWS------ILKKVPTHTIPVAHGY 357
                 G+    R         + +     DG +++                        
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244

Query: 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417
              ++    + S+        + +   DG +  W +  ++    +++       + +   
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK---IKNFAKFNEDSVVKIA 301

Query: 418 SDHKHLVAGIG--TEHRFGRW-KTIKGVKNTVAIID 450
                L       T        +TI+   +++ II 
Sbjct: 302 CSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIF 337

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.9 bits (130), Expect = 8e-09
 Identities = 20/177 (11%), Positives = 53/177 (29%), Gaps = 4/177 (2%)

Query: 221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAIT 277
           ++ +      K  I+ + I      L  +S D S+ V+  + +A    L     ++  + 
Sbjct: 1   MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60

Query: 278 SLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGT 336
             + +   +  I  G     +    +          ++       R+             
Sbjct: 61  CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120

Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393
             L  ++         +A    +S++            NS  +  G  +  V+ +++
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL 177

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.5 bits (124), Expect = 4e-08
 Identities = 18/190 (9%), Positives = 55/190 (28%), Gaps = 15/190 (7%)

Query: 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY 190
           +     N    +       + ++S  +     +  +  + L        +      +   
Sbjct: 137 IAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI 196

Query: 191 PPILALAVANNNELVASGDNNSNIKLWSSSLE--------------HLHTFTGHKAPITG 236
             +  L         +S D    ++ +    +                   T    P+  
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256

Query: 237 LAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296
           +  S     LY++ +D  I  WN++ R  ++         + + I   + ++    +D +
Sbjct: 257 IEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCLATSDDT 315

Query: 297 VRVWKIQEES 306
            +     +++
Sbjct: 316 FKTNAAIDQT 325

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 60.7 bits (145), Expect = 8e-11
 Identities = 27/260 (10%), Positives = 74/260 (28%), Gaps = 17/260 (6%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
           H    T    +    +  S    G +  W     + +  +                    
Sbjct: 57  HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116

Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
              +    +   ++ L+ +   + +     +A  +          + S S+D ++ ++  
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176

Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---------VFN 311
               +  T   H   + S+       + +S G D ++ ++   + ++             
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 236

Query: 312 GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371
                  +T   +  +  +   D T+ +W++       TIPV                + 
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI--------EDQQLG 288

Query: 372 CLHNSDLVASGSYDGCVKLW 391
            +     + S S +G +   
Sbjct: 289 IIWTKQALVSISANGFINFV 308

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.5 bits (116), Expect = 3e-07
 Identities = 10/68 (14%), Positives = 21/68 (30%)

Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
           + L      + +   +  S   +   SL     +T H    T    S       S     
Sbjct: 21  VVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80

Query: 254 SIKVWNIE 261
           ++++W+  
Sbjct: 81  NVRIWDTT 88

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.5 bits (116), Expect = 3e-07
 Identities = 37/293 (12%), Positives = 87/293 (29%), Gaps = 18/293 (6%)

Query: 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN 201
           R +   +  T     +       +     + + +       + T+            + +
Sbjct: 17  RGTAVVLGNTPAGDKIQYCNGTSVYT-VPVGSLTDT----EIYTEHSH--QTTVAKTSPS 69

Query: 202 NELVASGDNNSNIKLWSSSLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSI--- 255
               ASGD + N+++W ++        T      P+  ++   E   + +    R     
Sbjct: 70  GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129

Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSR 315
                   +        ++  +     ++   I SG  D +V +++          G   
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189

Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
               + R N    +     G  ++        T T         + +    +  +    +
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249

Query: 376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV--FTSDHKHLVAG 426
              +AS S D  +K+W +    TL+  + IP+   I           + LV+ 
Sbjct: 250 GTKIASASADKTIKIWNV---ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 299

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.1 bits (115), Expect = 4e-07
 Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 201 NNELVASGDNNSNIKLWS-SSLEHLHTFTGH-KAPITGLAISFECDTLYSSSNDRSIKVW 258
           +   +AS   +  IK+W+ ++L+   T     +     L I +    L S S +  I   
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308

Query: 259 NIE 261
           N E
Sbjct: 309 NPE 311

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 46.4 bits (108), Expect = 3e-06
 Identities = 14/88 (15%), Positives = 20/88 (22%), Gaps = 3/88 (3%)

Query: 219 SSLEHLHTFTGHKAPITGLAISFECD---TLYSSSNDRSIKVWNIEDRAYVETLFGHQSA 275
           S       F        G A+              N  S+    +      E    H   
Sbjct: 1   SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQ 60

Query: 276 ITSLDILAKNRVISSGGTDKSVRVWKIQ 303
            T           +SG    +VR+W   
Sbjct: 61  TTVAKTSPSGYYCASGDVHGNVRIWDTT 88

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 5/97 (5%)

Query: 121 NIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSS 180
           N  D                H  S+  +  + D   + SA  D  I  W + T     + 
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 276

Query: 181 PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLW 217
           P       +      L +    + + S   N  I   
Sbjct: 277 PV-----GTRIEDQQLGIIWTKQALVSISANGFINFV 308

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 59.8 bits (143), Expect = 2e-10
 Identities = 34/310 (10%), Positives = 79/310 (25%), Gaps = 53/310 (17%)

Query: 140 PHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
           P +       +  D++  Y      G I    L+T      +       +    + + A+
Sbjct: 37  PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96

Query: 199 ANNNELVASGDNNSNIKLWSSSLEH-----LHTFTGHKAPITGLAISFECDTLYSSSNDR 253
           + + + V +  N +        ++        T  G +A             L  +++D 
Sbjct: 97  SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156

Query: 254 SI-------KVWNIEDRAYVETLFGH-------------------------QSAITSLDI 281
           S+          +++   Y   L                                T    
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216

Query: 282 LAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL 339
               +  ++           ++  +     F   +       R         G    L+ 
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAK 276

Query: 340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
           + + ++       + H              VA     D +  G     + ++      TL
Sbjct: 277 YDLKQRKLIKAANLDH----------TYYCVAFDKKGDKLYLGGTFNDLAVFNP---DTL 323

Query: 400 EFLQDIPLSG 409
           E +++I L G
Sbjct: 324 EKVKNIKLPG 333

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 48.6 bits (114), Expect = 8e-07
 Identities = 18/157 (11%), Positives = 38/157 (24%), Gaps = 8/157 (5%)

Query: 130 TVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS 189
                +          T      D +   +A      +   L+T          +     
Sbjct: 196 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH-----TQEFADL 250

Query: 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS 249
                    +  +     G  N   K      + +            +A   + D LY  
Sbjct: 251 TELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLG 309

Query: 250 SNDRSIKVWNIEDRAYVET--LFGHQSAITSLDILAK 284
                + V+N +    V+   L G   + T+  +  +
Sbjct: 310 GTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 38.2 bits (87), Expect = 0.002
 Identities = 21/222 (9%), Positives = 59/222 (26%), Gaps = 18/222 (8%)

Query: 236 GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAITSLDILAKNR-VISSGGT 293
           G A+    + +  ++   ++ V ++      ++     +    +  +   NR        
Sbjct: 1   GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60

Query: 294 DKSVRVWKIQE-ESQLVFNGHSRGIDMTRRVNDQQFITCGE-----DGTLSLWSILKKVP 347
              +    +   ++    N  S   ++ R +        G+            +    V 
Sbjct: 61  YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120

Query: 348 THTIPVAHGYDSSSSEP-------NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE 400
              + V    D   ++P         +  +    +  L  +G     + +        L 
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180

Query: 401 F---LQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439
                +    +  +         +H  + + T  RF   K  
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 222

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.6 bits (137), Expect = 9e-10
 Identities = 36/302 (11%), Positives = 86/302 (28%), Gaps = 19/302 (6%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
            R   T ++    +  +   C     ++ L +  SKV           S    +  +   
Sbjct: 16  QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75

Query: 201 NNELVASGDNNSNIKLWSSS---------LEHLHTFTGHKAPITGLAISFECDTL--YSS 249
            ++ + SGD +  + +W  +         +     F     PI+ ++  FE   L     
Sbjct: 76  GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135

Query: 250 SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV-ISSGGTDKSVRVWKIQEESQL 308
             D      + +    +  + GH   I +  +     +   + G D SV  ++       
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195

Query: 309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368
             +          R  +    +     T+     +      +       +          
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255

Query: 369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSG----VINSLVFTSDHKHLV 424
                 +S   A+   D  +++W +    T + +Q   L           V  + +  ++
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDV---TTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312

Query: 425 AG 426
           + 
Sbjct: 313 SL 314

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 28/271 (10%), Positives = 73/271 (26%), Gaps = 25/271 (9%)

Query: 141 HRASITCIAV--TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV--KTDRKSYPPILAL 196
             + +T +       S+++ S  + G +I W      +  S         +    PI  +
Sbjct: 62  GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121

Query: 197 AVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-------TLYSS 249
           +       +       +      S +  ++          +              T+   
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181

Query: 250 SNDRSIKVWNIEDRAYVETLFGHQSAITSLDI------LAKNRVISSGGTDKSVRVWKIQ 303
            +    +    +  A   T     S +  ++                  +    +  +  
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241

Query: 304 EESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363
           +  +        GI     ++ Q+F T G D T+ +W +          +         +
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL-------DKQ 294

Query: 364 PNWITSVACLHNSD-LVASGSYDGCVKLWKI 393
                 V  +   +  + S S DG +  +++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.5 bits (134), Expect = 1e-09
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)

Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP 192
            +     P RA  + I+++    ++ +    G I+ + L++R    S    +T + +   
Sbjct: 153 VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS 212

Query: 193 I-----LALAVANNNELVASGDNNSNIKLWS--SSLEHLHTFTGHKAPITGLAISFECDT 245
                  A       +LVA+G  ++NI ++S    ++ +     HK  +  L       T
Sbjct: 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-ST 271

Query: 246 LYSSSNDRSIKVWNI 260
           L SS  D  IK WN+
Sbjct: 272 LVSSGADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.7 bits (119), Expect = 1e-07
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 9/58 (15%)

Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI 281
           L T +GH   IT L ++     L S S D  I  W+            H + I SLD 
Sbjct: 6   LKTISGHNKGITALTVN----PLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDN 54

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.3 bits (118), Expect = 2e-07
 Identities = 8/88 (9%), Positives = 36/88 (40%), Gaps = 2/88 (2%)

Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV--FNGHSR 315
                 + +  +    +   + +   +  ++++G  D ++ ++ ++   +++   N H  
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259

Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSIL 343
           G++          ++ G D  +  W+++
Sbjct: 260 GVNNLLWETPSTLVSSGADACIKRWNVV 287

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.9 bits (109), Expect = 2e-06
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 9/70 (12%)

Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383
            +    T   D  + ++S+ + +       AH         + + ++        + S  
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAH--------KDGVNNLLW-ETPSTLVSSG 276

Query: 384 YDGCVKLWKI 393
            D C+K W +
Sbjct: 277 ADACIKRWNV 286

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.7 bits (106), Expect = 6e-06
 Identities = 34/287 (11%), Positives = 81/287 (28%), Gaps = 23/287 (8%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
           H   IT + V      + S   DG I++W   +  +  S+            I++L  + 
Sbjct: 12  HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNL-----------IVSLDNSK 56

Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
             E  +   +++      +  E         A   G       D         +  +   
Sbjct: 57  AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 116

Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT 320
                  +              A      +      +   ++  + +         I ++
Sbjct: 117 VRLNSPGSAVSLSQNYV-----AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171

Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
                           L      +   +         ++ S +P    +       DLVA
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA 231

Query: 381 SGSYDGCVKLWKI-TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
           +GS D  + ++ +  P + ++ L        +N+L++ +    + +G
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALN--AHKDGVNNLLWETPSTLVSSG 276

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 56.0 bits (133), Expect = 3e-09
 Identities = 40/334 (11%), Positives = 82/334 (24%), Gaps = 55/334 (16%)

Query: 126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVK 184
                V            +     V    +  Y +  K   ++K  L T  +      + 
Sbjct: 18  TEKMAVDKV-ITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLS 75

Query: 185 TDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH------------LHTFTGHKA 232
           T  +    +   A++ + + +A  ++   ++L    ++                      
Sbjct: 76  TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR 135

Query: 233 PITGLAISFECDTLYSSSNDRSIKVWNIED---------------------RAYVETLFG 271
            IT LA + +   LY    D  +                              + +    
Sbjct: 136 QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195

Query: 272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHSRGIDMTRRVNDQQFIT 330
              A                     +    ++  E  +           +  VN  +   
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255

Query: 331 CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL 390
            G    L  + + K      +P+ H             SV    +   V  G   G +  
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPH----------SYYSVNVSTDGSTVWLGGALGDLAA 305

Query: 391 WKITPKRTLEFLQDIPLSG-----VINSLVFTSD 419
           +      TLE    + L G     + +  +FT D
Sbjct: 306 YDA---ETLEKKGQVDLPGNASMSLASVRLFTRD 336

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 0.001
 Identities = 7/101 (6%), Positives = 19/101 (18%), Gaps = 11/101 (10%)

Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDG 386
            +       L +    K      I +       +                   A+ +   
Sbjct: 4   ILAPARPDKLVVIDTEKMAVDKVITI-------ADAGPTPMVPMVAPGGRIAYATVNKSE 56

Query: 387 CVKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424
            +    +        ++          +     + D K L 
Sbjct: 57  SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 19/208 (9%), Positives = 49/208 (23%), Gaps = 17/208 (8%)

Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA---KNRVISSGGTDKSVRVW 300
           D + + +    + V + E  A  + +    +  T +  +         ++    +S+   
Sbjct: 2   DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61

Query: 301 KIQEESQLVFNGHSRGIDMTRRVND-------QQFITCGEDGTLSLWSILKKVPTHTIPV 353
            +     L     S   +  + +         +          L L     +     +  
Sbjct: 62  DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121

Query: 354 AHGYDSSSSEP--NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI 411
           A       +      IT +A   +   +     D  V             ++D P+    
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP-----EAGTLVEDKPIQSWE 176

Query: 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTI 439
                  D   +     +          
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYT 204

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 55.0 bits (130), Expect = 6e-09
 Identities = 34/286 (11%), Positives = 81/286 (28%), Gaps = 10/286 (3%)

Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
           H  +IT ++ ++D K ++SA  +G I  W + T       P V         I  +   +
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-----MITGIKTTS 65

Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
             +L     ++    + +       +        +             +       +   
Sbjct: 66  KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125

Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT 320
                 E    + S+  +L    +   +    +   V        S++    H   I   
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185

Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
              N+  F+             +              +S +     +  V+   ++  +A
Sbjct: 186 AFSNNGAFLVAT-----DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240

Query: 381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
           +GS D  V +W +        +     +    + V   +   +V+ 
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSA 286

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 54.6 bits (129), Expect = 8e-09
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)

Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDIL 282
                GH   IT L+ S +  TL+S+  +  I  W+I            H + IT +   
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 283 AKNRVISSGGTDKSVRVW 300
           +K  + +    D    V 
Sbjct: 65  SKGDLFTVSWDDHLKVVP 82

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 48.8 bits (114), Expect = 6e-07
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 2/103 (1%)

Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSRGIDMTRRV 323
            +  +GH  AIT+L   A  + + S   +  +  W I     +++  + H+  I   +  
Sbjct: 5   DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64

Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366
           +     T   D  L +          +  VA+   S       
Sbjct: 65  SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 107

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 47.3 bits (110), Expect = 2e-06
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383
           ++ +  T   D ++ +W++ K      I       S         +     N   + S  
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS-------SVNSVIWLNETTIVSAG 287

Query: 384 YDGCVKLWKIT 394
            D  +K W + 
Sbjct: 288 QDSNIKFWNVP 298

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 45.4 bits (105), Expect = 7e-06
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)

Query: 243 CDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDKSVRVW 300
              L + S D S+ VWN+   +    +    H  +  +  I      I S G D +++ W
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295

Query: 301 KI 302
            +
Sbjct: 296 NV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.4 bits (100), Expect = 3e-05
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 290 SGGTDKSVRVWKIQEESQ---LVFNGHSRG-IDMTRRVNDQQFITCGEDGTLSLWSI 342
           +G  D SV VW + + S    ++   H+   ++    +N+   ++ G+D  +  W++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.9 bits (96), Expect = 8e-05
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 206 ASGDNNSNIKLW---SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
           A+G  ++++ +W     S   +     H        I     T+ S+  D +IK WN+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 40.7 bits (93), Expect = 2e-04
 Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424
             IT+++   +   + S   +G +  W I+   +     D+  + +I  +  TS      
Sbjct: 13  KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH-ATMITGIKTTSKGDLFT 71

Query: 425 AGIGTEHRF 433
                  + 
Sbjct: 72  VSWDDHLKV 80

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 50.2 bits (118), Expect = 2e-07
 Identities = 19/211 (9%), Positives = 47/211 (22%), Gaps = 31/211 (14%)

Query: 209 DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--- 265
                I ++      +   T   +     A   +   LY  S        +     +   
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215

Query: 266 ----VETLFGHQSAITSLDILAKNRVISSG-----GTDKSVRVWKIQEESQLVFNGHSRG 316
                  +     +     ++ ++    +G        K      +      +       
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 275

Query: 317 IDMTRRVND----QQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVA 371
           I +            +    E G L  + +  +KV                  N +T + 
Sbjct: 276 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--------------NNLTDLR 321

Query: 372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402
              +   V     DG +  + +        +
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 49.9 bits (117), Expect = 3e-07
 Identities = 9/168 (5%), Positives = 35/168 (20%), Gaps = 17/168 (10%)

Query: 201 NNELVASGDNNSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFECDTLYSSSND 252
           +++ +      S        +                         +     T  +   D
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248

Query: 253 RSIKVWNI-------EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEE 305
            +              D   +  L       +                   +  + ++  
Sbjct: 249 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 308

Query: 306 SQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353
                  +   + ++   + +  +   +DG +  + + K     T+  
Sbjct: 309 KVTEVKNNLTDLRLSA--DRKTVMVRKDDGKIYTFPLEKPEDERTVET 354

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 47.9 bits (112), Expect = 1e-06
 Identities = 10/131 (7%), Positives = 29/131 (22%), Gaps = 6/131 (4%)

Query: 141 HRASITCIAVTSDSKHVYSA--CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
              S     +   S    +     + +  +              +  +            
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI-YSVPVH 284

Query: 199 ANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
                          +  +      +     +   +T L +S +  T+    +D  I  +
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNN---LTDLRLSADRKTVMVRKDDGKIYTF 341

Query: 259 NIEDRAYVETL 269
            +E      T+
Sbjct: 342 PLEKPEDERTV 352

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 39.8 bits (91), Expect = 4e-04
 Identities = 17/206 (8%), Positives = 47/206 (22%), Gaps = 13/206 (6%)

Query: 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR 263
            +        + ++         F  +   +  + +         +++   I   ++E  
Sbjct: 58  FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117

Query: 264 AYVETLFGHQSAITSLDIL----------AKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
                    ++ IT   I                 + G   +++ V+ ++          
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177

Query: 314 SRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
           +          D + +                 V   +  V          P        
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDR--VVLNFSFEVVSKPFVIPLIPGSPNPTKL 235

Query: 373 LHNSDLVASGSYDGCVKLWKITPKRT 398
           +  S    +G YD      + +P   
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINV 261

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 45.6 bits (106), Expect = 8e-06
 Identities = 26/317 (8%), Positives = 72/317 (22%), Gaps = 46/317 (14%)

Query: 113 EQEGKLRV-NIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLL 171
           E+   + V +    L  A +                 ++T D K +            ++
Sbjct: 75  ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134

Query: 172 ETRS----KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTF 227
           +       ++   P       + P    +   + +    +       ++  +        
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE----VFH 190

Query: 228 TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKN 285
              +  I   A S +   L   +    I   ++      ++  +     A  +       
Sbjct: 191 PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG 250

Query: 286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK 345
               +           + +  +                             + +      
Sbjct: 251 WQQVAYHRALDRIYLLVDQRDEWRHKTA--------------------SRFVVVLDAKTG 290

Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVKLWKITPKRTLEFLQ 403
                  + H           I S+         L A  + D  + +       + E L+
Sbjct: 291 ERLAKFEMGH----------EIDSINVSQDEKPLLYALSTGDKTLYIHDA---ESGEELR 337

Query: 404 DIPLSGVINSLVFTSDH 420
            +   G    ++ T+D 
Sbjct: 338 SVNQLGHGPQVITTADM 354

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 44.4 bits (103), Expect = 2e-05
 Identities = 16/191 (8%), Positives = 46/191 (24%), Gaps = 20/191 (10%)

Query: 110 VVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKW 169
            +  ++G L            +  T+         I   A +  +  +      G I + 
Sbjct: 162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI 221

Query: 170 LLETRSKVCSSPFVKTDRK----------------SYPPILALAVANNNELVASGDNNSN 213
            L +                                        + +  +       +  
Sbjct: 222 DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 281

Query: 214 IKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLY--SSSNDRSIKVWNIEDRAYVETLF 270
           + +    + E L  F         + +S +   L    S+ D+++ + + E    + ++ 
Sbjct: 282 VVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340

Query: 271 GHQSAITSLDI 281
                   +  
Sbjct: 341 QLGHGPQVITT 351

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 43.4 bits (101), Expect = 4e-05
 Identities = 14/245 (5%), Positives = 48/245 (19%), Gaps = 34/245 (13%)

Query: 148 IAVTSDSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKS-YPPILALAVANNNELV 205
           I   + S  +              +   S    +                   +    L 
Sbjct: 129 IGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLA 188

Query: 206 ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY 265
           AS    +         +                 ++    +++ ++              
Sbjct: 189 ASDLAAAPAAAGIVGAQ---CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATM 245

Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSR---------- 315
              + G++S   + +  +    + +   +    +    E S+                  
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ 305

Query: 316 ------------GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363
                        I   +      +        L ++         ++ +  G       
Sbjct: 306 TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG------- 358

Query: 364 PNWIT 368
           P  ++
Sbjct: 359 PESLS 363

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 39.5 bits (90), Expect = 6e-04
 Identities = 7/54 (12%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 217 WSSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYVETL 269
            + + +          P  G+A++ +   +Y + S   ++ V +        T+
Sbjct: 230 DTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 10/60 (16%), Positives = 26/60 (43%)

Query: 378 LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437
           +  +      + +W +  +  L   Q + + G +  +V + D ++L  G+  E R   ++
Sbjct: 6   VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.0 bits (87), Expect = 0.002
 Identities = 29/255 (11%), Positives = 65/255 (25%), Gaps = 12/255 (4%)

Query: 183 VKTDRKSYPPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISF 241
           V    +  P      +   N    +  +   I L    S + +       A      +S 
Sbjct: 13  VLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAV-HISRMSA 71

Query: 242 ECDTLYSSSNDRSIKVWNIEDR-----AYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296
               L     D  I + ++  +     A ++     +S  +S     ++R   +G     
Sbjct: 72  SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131

Query: 297 VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356
                  E  +         +       D Q           + S         +     
Sbjct: 132 QFAIMDGETLEPKQI-----VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186

Query: 357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF 416
               + +     +V  +  +  +A G +D   + +      + +          +++LV 
Sbjct: 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 246

Query: 417 TSDHKHLVAGIGTEH 431
                H   G    H
Sbjct: 247 VGKTPHPGRGANFVH 261

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 279

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT--GHKAPITGLAISFECDTLY 247
             PI     +N   L+A   NN N+ +++   + +         A    +A+  +  ++ 
Sbjct: 200 NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDD-GSVV 258

Query: 248 SSSNDRSIKVWNI 260
            +S D  + ++  
Sbjct: 259 LASKDYRLYIYRY 271

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (85), Expect = 0.004
 Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 13/114 (11%)

Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387
            +T  + G ++L           +               +       +   +     DG 
Sbjct: 35  SVTLRDAGQIALIDGSTYEIKTVLDT----------GYAVHISRLSASGRYLFVIGRDGK 84

Query: 388 VKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438
           V +  +    P    E         +  S +   + K+ +AG     ++     
Sbjct: 85  VNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 138

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.1 bits (85), Expect = 0.004
 Identities = 25/204 (12%), Positives = 54/204 (26%), Gaps = 14/204 (6%)

Query: 191 PPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISFECDTLYSS 249
           P          N    +  +   I L   S+ E         A      +S     L+  
Sbjct: 21  PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVI 79

Query: 250 SNDRSIKVWNIEDR-----AYVETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQ 303
             D  + + ++  +     A ++     +S  TS     +    I+         +   +
Sbjct: 80  GRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 139

Query: 304 EESQLVFNGHSRGIDMTRRVN---DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360
                            +  +       I         + ++     T  I +    D +
Sbjct: 140 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKILLVDYTDLN 196

Query: 361 SSEPNWITSVACLHNSDLVASGSY 384
           + +   I++   LH+  L  S  Y
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRY 220

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	454
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.97
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.97
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.96
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.96
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.95
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.95
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.94
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.94
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.92
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.92
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.91
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.9
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.89
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.89
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.89
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.88
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.84
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.81
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.8
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.79
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.78
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.69
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.69
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.64
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.63
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.47
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.47
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.46
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.4
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.38
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.35
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.33
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.33
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.32
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.28
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.25
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.25
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.16
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	99.15
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.11
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	99.07
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	99.03
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.89
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	98.85
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.79
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.74
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.57
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	98.5
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	98.35
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	98.22
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	98.22
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	98.13
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	98.08
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	98.07
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.99
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	97.91
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	97.9
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	97.9
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.86
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	97.79
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	97.78
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	97.72
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.63
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.56
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	97.52
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.47
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	97.43
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	97.25
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	97.0
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	96.96
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	96.78
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	96.68
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	96.66
d2hu7a1	313	Acylamino-acid-releasing enzyme, N-terminal donain	96.09
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.81
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	95.69
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	92.88
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	91.26
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	90.17
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	89.64
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	88.16
d1crua_	450	Soluble quinoprotein glucose dehydrogenase {Acinet	85.94
d1wp5a_	323	Topoisomerase IV subunit A, ParC, C-terminal domai	81.7

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-45  Score=331.46  Aligned_cols=289  Identities=17%  Similarity=0.262  Sum_probs=251.3

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      .+..+ +  |...|+|++|+|+|++|++|+ ||.|+|||+.+......+. ......|...|.+++|+|++++|++|+.|
T Consensus        44 ~~~~~-~--H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~-~~~~~~h~~~I~~v~~s~dg~~l~s~~~d  118 (337)
T d1gxra_          44 QINTL-N--HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVS-QLDCLNRDNYIRSCKLLPDGCTLIVGGEA  118 (337)
T ss_dssp             EEEEE-C--CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSE-EEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred             EEEEC-C--CCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeE-EeeecCCCCcEEEEEEcCCCCEEEEeecc
Confidence            34444 5  999999999999999999987 8999999998765443322 12223688899999999999999999999


Q ss_pred             CcEEEEeCC---CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE
Q psy17902        212 SNIKLWSSS---LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       212 g~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  288 (454)
                      |.|++||+.   ......+..|...+.+++|+|++.++++++.|+.|++|++.+++......+|...|++++|++++..+
T Consensus       119 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~  198 (337)
T d1gxra_         119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL  198 (337)
T ss_dssp             SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999983   34456778899999999999999999999999999999999999998888999999999999999999


Q ss_pred             EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902        289 SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI  367 (454)
Q Consensus       289 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i  367 (454)
                      ++++.|+.|++||+++++.+....+...+.++.+. ++..|++++.|+.|++||+..+......          .|...|
T Consensus       199 ~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------~~~~~i  268 (337)
T d1gxra_         199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH----------LHESCV  268 (337)
T ss_dssp             EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC----------CCSSCE
T ss_pred             ccccccccccccccccceeecccccccceEEEEEcccccccceecccccccccccccccccccc----------cccccc
Confidence            99999999999999999988777788888877765 5778999999999999999887654332          245669


Q ss_pred             EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ++++|+|++++|++|+.||.|++||+.+++.+..+.   |.+.|++++|+|++++|+++ +.|+.|++|++.
T Consensus       269 ~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~t~-s~D~~I~vWdl~  336 (337)
T d1gxra_         269 LSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTG-SGDKKATVYEVI  336 (337)
T ss_dssp             EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEEEEE-ETTSCEEEEEEE
T ss_pred             ceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc---CCCCEEEEEEeCCCCEEEEE-eCCCeEEEEEEE
Confidence            999999999999999999999999999998887765   67899999999999999998 899999999863

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.4e-44  Score=321.38  Aligned_cols=286  Identities=21%  Similarity=0.380  Sum_probs=259.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....|+|  |.+.|++|+|+|++++|+||+.||+|+|||+.+++....+.      +|...|.+++|+|++.+++++..+
T Consensus         9 ~~~~L~G--H~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~------~h~~~V~~~~~~~~~~~~~~~~~~   80 (317)
T d1vyhc1           9 EKYALSG--HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK------GHTDSVQDISFDHSGKLLASCSAD   80 (317)
T ss_dssp             CSCEEEC--CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred             ccEEEcC--CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEe------CCCCcEEEEeeecccccccccccc
Confidence            3457899  99999999999999999999999999999999988777665      588899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +.+.+|+. .......+..|...+.++.|++++..+++++.|+.+++||+.++..+..+.+|...+.+++|+|++.+|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  160 (317)
T d1vyhc1          81 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS  160 (317)
T ss_dssp             SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred             cccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEE
Confidence            99999998 66677778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEE-EEccccCCeEEEEec---------------------CCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV---------------------NDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~---------------------~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ++.|+.|++|++.++... .+..+...+.++.+.                     ++..+++++.|+.|++||+.++.++
T Consensus       161 ~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~  240 (317)
T d1vyhc1         161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL  240 (317)
T ss_dssp             EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred             EeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEE
Confidence            999999999999988776 566677666665543                     3457889999999999999999988


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ..+..         |...|.+++|+|++++|++|+.||.|++||+.+++++..+..  |.++|++++|+|++++|+++ +
T Consensus       241 ~~~~~---------~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--h~~~V~~~~~s~~~~~l~s~-s  308 (317)
T d1vyhc1         241 MTLVG---------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--HEHFVTSLDFHKTAPYVVTG-S  308 (317)
T ss_dssp             EEEEC---------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC--CSSCEEEEEECSSSSCEEEE-E
T ss_pred             EEEeC---------CCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEE-e
Confidence            88764         445599999999999999999999999999999999999886  88999999999999999998 8


Q ss_pred             CCCceeeee
Q psy17902        429 TEHRFGRWK  437 (454)
Q Consensus       429 ~d~~i~~W~  437 (454)
                      .|+.|++|+
T Consensus       309 ~Dg~i~iWd  317 (317)
T d1vyhc1         309 VDQTVKVWE  317 (317)
T ss_dssp             TTSEEEEEC
T ss_pred             CCCeEEEeC
Confidence            999999996

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.6e-42  Score=319.05  Aligned_cols=299  Identities=19%  Similarity=0.308  Sum_probs=239.1

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcc------------cCCCCCCceEEEEEeCCC
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVK------------TDRKSYPPILALAVANNN  202 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~~~~~  202 (454)
                      ...+  |++.|+||+|+|+|++||+|+ |+.|+|||+.++..+..+....            ....|...|.+++|+|++
T Consensus        57 ~~~~--H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~  133 (388)
T d1erja_          57 KSLD--HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG  133 (388)
T ss_dssp             EEEE--CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTS
T ss_pred             eeCC--CCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCC
Confidence            3346  999999999999999999986 8999999999887665443211            123567789999999999


Q ss_pred             cEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902        203 ELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI  281 (454)
Q Consensus       203 ~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~  281 (454)
                      ++|++|+.||.|++|+. .+..+..+.+|...|.+++|++++..+++++.++.|++||+.+.........+...+..+.+
T Consensus       134 ~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~  213 (388)
T d1erja_         134 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS  213 (388)
T ss_dssp             SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred             Ccceecccccccccccccccccccccccccccccccccccccccccccccceeeeeeecccccccccccccccccccccc
Confidence            99999999999999999 77778888999999999999999999999999999999999999888777666655554444


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccCCeEE--------EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQEESQL--------VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .+++++|++++.|+.|++|++.++...        ...+|...|.++.+. ++.+|++++.||.|++||+.+........
T Consensus       214 ~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~  293 (388)
T d1erja_         214 PGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSK  293 (388)
T ss_dssp             STTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC----------
T ss_pred             CCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccc
Confidence            557899999999999999999987765        234567788777765 57789999999999999998765443322


Q ss_pred             cccCC---CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEE------EcCCCCEE
Q psy17902        353 VAHGY---DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV------FTSDHKHL  423 (454)
Q Consensus       353 ~~~~~---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~------~s~d~~~l  423 (454)
                      .....   .....|...|.+++|+|++++|++|+.||.|++||+.+++++..+..  |.+.|++++      |+|++.+|
T Consensus       294 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~--H~~~V~~~~~~~~~~~spd~~~l  371 (388)
T d1erja_         294 TPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--HRNSVISVAVANGSSLGPEYNVF  371 (388)
T ss_dssp             -----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSCTTCTTCEEE
T ss_pred             cccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeC--CCCCEEEEEEecCcccCCCCCEE
Confidence            11110   00113566799999999999999999999999999999999999987  888899887      46789999


Q ss_pred             EEEecCCCceeeeeee
Q psy17902        424 VAGIGTEHRFGRWKTI  439 (454)
Q Consensus       424 ~~~~~~d~~i~~W~~~  439 (454)
                      +++ |.||.|++|++.
T Consensus       372 ~s~-s~Dg~I~iW~~~  386 (388)
T d1erja_         372 ATG-SGDCKARIWKYK  386 (388)
T ss_dssp             EEE-ETTSEEEEEEEE
T ss_pred             EEE-eCCCEEEEEeee
Confidence            988 899999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-41  Score=305.09  Aligned_cols=286  Identities=14%  Similarity=0.198  Sum_probs=240.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-  219 (454)
                      +++.+.+++++|+|+.|+.++ ++.|.+|++.+......+.      +|...|++++|+|+|++||+|+.||.|+||++ 
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~------~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~   88 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT------EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT   88 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEc------CCCCCEEEEEEeCCCCeEeccccCceEeeeeee
Confidence            666788999999999999986 5679999999877666554      68899999999999999999999999999999 


Q ss_pred             CCc--cEEeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE-EEEeeCC
Q psy17902        220 SLE--HLHTFTGHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV-ISSGGTD  294 (454)
Q Consensus       220 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d  294 (454)
                      ...  ....+..|..+|.+++|+|++++|++++.  +..+++|++.+++....+.+|...|++++|+|++.+ |++|+.|
T Consensus        89 ~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d  168 (311)
T d1nr0a1          89 QTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD  168 (311)
T ss_dssp             STTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETT
T ss_pred             ccccccccccccccCccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeecccccc
Confidence            333  23567889999999999999999999986  456999999999998899999999999999999875 8889999


Q ss_pred             CcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902        295 KSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC  372 (454)
Q Consensus       295 g~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  372 (454)
                      +.|++||+++.+.. ....|...+.++.+. ++.++++++.|+.|++||+.++.....+.....  ....|..+|++++|
T Consensus       169 ~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~~~~h~~~V~~~~~  246 (311)
T d1nr0a1         169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL--KNVAHSGSVFGLTW  246 (311)
T ss_dssp             SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS--SSCSSSSCEEEEEE
T ss_pred             cccccccccccccccccccccccccccccCcccccccccccccccccccccccccccccccccc--cccccccccccccc
Confidence            99999999998877 677888888877776 567899999999999999999887776654322  22347788999999


Q ss_pred             ecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-CceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      +|++++|++|+.||+|+|||+.+++++..+.... ....+.++.|  ++.+|+++ +.||.|++|+.
T Consensus       247 s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~--~~~~l~s~-s~dG~i~~wd~  310 (311)
T d1nr0a1         247 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW--TKQALVSI-SANGFINFVNP  310 (311)
T ss_dssp             CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE--CSSCEEEE-ETTCCEEEEET
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEe--cCCEEEEE-ECCCEEEEEeC
Confidence            9999999999999999999999999888886521 1233444555  56678887 78999999985

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.7e-40  Score=301.52  Aligned_cols=287  Identities=23%  Similarity=0.338  Sum_probs=253.3

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..++|+|  |.+.|++|+|+|++++||+|+.||.|+|||+.++..+..+.      .|..+|.+++|+|++.++++|+.|
T Consensus        47 ~~~tL~G--H~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~------~~~~~v~~v~~~~~~~~l~~~~~d  118 (340)
T d1tbga_          47 TRRTLRG--HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP------LRSSWVMTCAYAPSGNYVACGGLD  118 (340)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEE------CSCSCEEEEEECTTSSEEEEEETT
T ss_pred             eeEEECC--CCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEe------cccccEEeeEeeccceeeeeeccc
Confidence            5678999  99999999999999999999999999999999998877765      588899999999999999999999


Q ss_pred             CcEEEEeC-----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902        212 SNIKLWSS-----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR  286 (454)
Q Consensus       212 g~v~vw~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~  286 (454)
                      +.+.+|+.     .......+.+|.......... .+..++.+..+.....+.............+...+....+.+.+.
T Consensus       119 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (340)
T d1tbga_         119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR  197 (340)
T ss_dssp             CCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS
T ss_pred             ceeecccccccccccccceecccccccccccccc-cccccccccccccccccccccccccccccccceeEeeeccccccc
Confidence            99999997     233455667787777766555 456788888999999999988888777788889999999999999


Q ss_pred             EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      ++++++.|+.|++||++++..+ .+.+|...+.++.+. ++.+|++++.||.|++|++........+....       +.
T Consensus       198 ~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~-------~~  270 (340)
T d1tbga_         198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-------II  270 (340)
T ss_dssp             EEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-------CC
T ss_pred             eeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccccccccccc-------cc
Confidence            9999999999999999998887 778899999887765 57789999999999999999888777664332       34


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      ..|++++|+|++++|++|+.||.|++||+.+++.+..+..  |.++|++++|+|++.+|+++ |.||.|++|+
T Consensus       271 ~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--H~~~V~~l~~s~d~~~l~s~-s~Dg~v~iWd  340 (340)
T d1tbga_         271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATG-SWDSFLKIWN  340 (340)
T ss_dssp             SCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred             CceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEeCCCCEEEEE-ccCCEEEEeC
Confidence            5599999999999999999999999999999999999886  88999999999999999988 8999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3e-39  Score=288.34  Aligned_cols=287  Identities=16%  Similarity=0.227  Sum_probs=227.0

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.+.|  |.+.|++++|+|++++|++|+.||.|++||+.++.....+..     .|...|.+++|+|++.++ +++.|
T Consensus         4 ~~~~~~G--H~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-----~h~~~v~~v~~~~~g~~~-~~~~d   75 (299)
T d1nr0a2           4 IDQVRYG--HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD-----VHATMITGIKTTSKGDLF-TVSWD   75 (299)
T ss_dssp             EEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSC-----SCSSCEEEEEECTTSCEE-EEETT
T ss_pred             cceEcCC--CCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcC-----CCCCcEEEEEeeccceee-cccce
Confidence            4577889  999999999999999999999999999999999887766542     578899999999999755 45568


Q ss_pred             CcEEEEeCCCcc----EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        212 SNIKLWSSSLEH----LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       212 g~v~vw~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      +.+++|+.....    ......+...+.+++|++++.++++++ ++.+.+|+...  .....  ....+.+++|+|++++
T Consensus        76 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~~~--~~~~~--~~~~~~~~~~s~~~~~  150 (299)
T d1nr0a2          76 DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSHGK--LTEVP--ISYNSSCVALSNDKQF  150 (299)
T ss_dssp             TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEETTE--EEEEE--CSSCEEEEEECTTSCE
T ss_pred             eeEEEeccCCccccccccccccccccccccccccccccccccc-ccccccccccc--ccccc--cccccccccccccccc
Confidence            999999984322    223345778899999999998777665 56899999543  22222  3456789999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      |++|+.||.|++||+.+....  ....|...+.++.+. ++.+|++++.|+.|++||+.++.........      ..|.
T Consensus       151 l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~------~~h~  224 (299)
T d1nr0a2         151 VAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW------TFHT  224 (299)
T ss_dssp             EEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC------CCCS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------cccc
Confidence            999999999999999987654  456778888877765 5678999999999999999876655433321      2356


Q ss_pred             CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      ..|++++|+|++.+|++|+.||.|++||+.++.....+.. ..+...|.++.| +++.+|+++ |.|+.|++|++.
T Consensus       225 ~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~-s~D~~i~iWdl~  298 (299)
T d1nr0a2         225 AKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSA-GQDSNIKFWNVP  298 (299)
T ss_dssp             SCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEE-ETTSCEEEEECC
T ss_pred             cccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEE-eCCCEEEEEecc
Confidence            6799999999999999999999999999988754433322 224455666655 567889888 799999999963

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=7.1e-39  Score=294.95  Aligned_cols=284  Identities=14%  Similarity=0.126  Sum_probs=224.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS  220 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~  220 (454)
                      +..+|+|++|+|++++||+|+.||.|+||++.+++......    ..+|..+|.+++|+|++++|++|+.|+.|+||++.
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~----l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~   81 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHE----LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK   81 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEE----EECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEE----ecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeec
Confidence            56789999999999999999999999999998765332211    12689999999999999999999999999999993


Q ss_pred             -Cc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee----EEEeeccCCceeEEEeecCCCEEEEeeC
Q psy17902        221 -LE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY----VETLFGHQSAITSLDILAKNRVISSGGT  293 (454)
Q Consensus       221 -~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~  293 (454)
                       ..  ....+..|...|++++|+|+++.|++|+.|+.|++|++.....    ......|...|.+++|+|++.+|++|+.
T Consensus        82 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~  161 (371)
T d1k8kc_          82 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC  161 (371)
T ss_dssp             TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceecccc
Confidence             32  3455678999999999999999999999999999999876543    2334568899999999999999999999


Q ss_pred             CCcEEEeeccCCe------------------E-EEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        294 DKSVRVWKIQEES------------------Q-LVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       294 dg~i~i~d~~~~~------------------~-~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |+.|++|++....                  . .....|...+..+.+. ++++|++++.|+.|++||+.++..+..+..
T Consensus       162 D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~  241 (371)
T d1k8kc_         162 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS  241 (371)
T ss_dssp             TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred             CcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec
Confidence            9999999976422                  1 2445677777777665 578899999999999999999888887764


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec------------------------------
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ------------------------------  403 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~------------------------------  403 (454)
                               |..+|.+++|+|++.+|++|+ |+.+++|..........+.                              
T Consensus       242 ---------~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (371)
T d1k8kc_         242 ---------ETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE  311 (371)
T ss_dssp             ---------SSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred             ---------ccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEe
Confidence                     344599999999998888765 6777777654321110000                              


Q ss_pred             ---------cCCCceeeeEEEEcCCCC----EEEEEecCCCceeeeeee
Q psy17902        404 ---------DIPLSGVINSLVFTSDHK----HLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       404 ---------~~~~~~~v~~l~~s~d~~----~l~~~~~~d~~i~~W~~~  439 (454)
                               ...|.+.|+++++.|.+.    .|+++ |.||.|++|++.
T Consensus       312 ~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~-g~Dg~v~iW~~~  359 (371)
T d1k8kc_         312 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT-GMDGGMSIWDVR  359 (371)
T ss_dssp             ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEE-ETTSEEEEEEHH
T ss_pred             ccccccceecccccCCEEEEEEeCCCCcceEEEEEE-cCCCeEEEEeCC
Confidence                     002677899999987553    46666 899999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.7e-38  Score=282.40  Aligned_cols=249  Identities=12%  Similarity=0.150  Sum_probs=210.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-  210 (454)
                      ..+.|.+  |...|++++|+|+|++||+|+.||.|+|||+.+........+    ..|..+|.+++|+|++++|++++. 
T Consensus        50 ~~~~~~~--H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~~~~~~----~~~~~~v~~v~~s~d~~~l~~~~~~  123 (311)
T d1nr0a1          50 DTEIYTE--HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTI----PVFSGPVKDISWDSESKRIAAVGEG  123 (311)
T ss_dssp             CCEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEE----ECSSSCEEEEEECTTSCEEEEEECC
T ss_pred             eeEEEcC--CCCCEEEEEEeCCCCeEeccccCceEeeeeeecccccccccc----ccccCcccccccccccccccccccc
Confidence            4556788  999999999999999999999999999999988764432111    257789999999999999999876 


Q ss_pred             -CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        211 -NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       211 -dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                       +..++||++ .+.....+.+|...|++++|+|++.+ |++|+.||.|++||+++++....+..|..+|+++.|+|++++
T Consensus       124 ~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~  203 (311)
T d1nr0a1         124 RERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL  203 (311)
T ss_dssp             SSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             ccccccccccccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCccccc
Confidence             456999999 66777888999999999999999875 788999999999999999999999999999999999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEEE--------EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQLV--------FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD  358 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~~--------~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~  358 (454)
                      |++++.|+.|++||+.++....        ..+|...|.++.+. ++.+|++|+.||.|+|||+.+++++.++...... 
T Consensus       204 l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~-  282 (311)
T d1nr0a1         204 FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI-  282 (311)
T ss_dssp             EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG-
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCc-
Confidence            9999999999999999877652        23567788887765 5789999999999999999999998888754432 


Q ss_pred             CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                           ...+.++.  +++++|++++.||.|++||.+
T Consensus       283 -----~~~~~~~~--~~~~~l~s~s~dG~i~~wd~d  311 (311)
T d1nr0a1         283 -----EDQQLGII--WTKQALVSISANGFINFVNPE  311 (311)
T ss_dssp             -----GGCEEEEE--ECSSCEEEEETTCCEEEEETT
T ss_pred             -----cceEEEEE--ecCCEEEEEECCCEEEEEeCC
Confidence                 12244444  456689999999999999963

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-36  Score=275.91  Aligned_cols=245  Identities=16%  Similarity=0.256  Sum_probs=215.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ......+  |.+.|.+++|+|++++|++|+.||.|++||+..........    ...|...+.+++|+|++.++++++.+
T Consensus        89 ~~~~~~~--h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d  162 (337)
T d1gxra_          89 SQLDCLN--RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE----LTSSAPACYALAISPDSKVCFSCCSD  162 (337)
T ss_dssp             EEEECSC--TTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE----EECSSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEeeecC--CCCcEEEEEEcCCCCEEEEeecccccccccccccccccccc----cccccccccccccccccccccccccc
Confidence            3344456  99999999999999999999999999999987654322111    12577789999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      +.|.+|++ +.........|...|.+++|++++..+++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++
T Consensus       163 ~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~  241 (337)
T d1gxra_         163 GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAV  241 (337)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccceeeccc-ccccceEEEEEcccccccce
Confidence            99999999 66777788889999999999999999999999999999999999988766 58899999999999999999


Q ss_pred             eeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902        291 GGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS  369 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~  369 (454)
                      ++.|+.|++||++++.......|...+..+.+. ++.+|++++.||.|++||+.+++.+..+.          |...|.+
T Consensus       242 ~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~----------~~~~v~~  311 (337)
T d1gxra_         242 GMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----------ESSSVLS  311 (337)
T ss_dssp             EETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----------CSSCEEE
T ss_pred             eccccccccccccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc----------CCCCEEE
Confidence            999999999999999988888999999888775 56789999999999999999998887654          3445999


Q ss_pred             EEEecCCCEEEEecCCCcEEEEEc
Q psy17902        370 VACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       370 ~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      ++|+|++++|++|+.||+|+|||+
T Consensus       312 ~~~s~d~~~l~t~s~D~~I~vWdl  335 (337)
T d1gxra_         312 CDISVDDKYIVTGSGDKKATVYEV  335 (337)
T ss_dssp             EEECTTSCEEEEEETTSCEEEEEE
T ss_pred             EEEeCCCCEEEEEeCCCeEEEEEE
Confidence            999999999999999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-36  Score=270.59  Aligned_cols=286  Identities=19%  Similarity=0.321  Sum_probs=225.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ..+.|+|  |.+.|.+ +++++|++||||+.||+|+|||+.+++.+..+.      +|...|.+++|+++  +|++|+.|
T Consensus         8 ~~~~l~G--H~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~------~h~~~V~~v~~~~~--~l~s~s~D   76 (342)
T d2ovrb2           8 SPKVLKG--HDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV------GHTGGVWSSQMRDN--IIISGSTD   76 (342)
T ss_dssp             CCEEEEC--STTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECC------CCSSCEEEEEEETT--EEEEEETT
T ss_pred             cCEEECC--cCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEe------CCCCCEEEEEeCCC--ccccceec
Confidence            5577899  9999865 366678999999999999999999998877765      68999999999875  89999999


Q ss_pred             CcEEEEeCCCc-cEEeecccCCCe--------------------------------------EEEEEcCCCCEEEEEeCC
Q psy17902        212 SNIKLWSSSLE-HLHTFTGHKAPI--------------------------------------TGLAISFECDTLYSSSND  252 (454)
Q Consensus       212 g~v~vw~~~~~-~~~~~~~~~~~v--------------------------------------~~~~~~~~~~~l~~~~~d  252 (454)
                      +.+++|+.... .......+...+                                      ....+.+....+++++.|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  156 (342)
T d2ovrb2          77 RTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD  156 (342)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred             ccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCC
Confidence            99999997322 211111111111                                      111223345678899999


Q ss_pred             CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEE
Q psy17902        253 RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       253 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~  331 (454)
                      +.|++||+.....+..+.+|...+..+.  +++.+|++++.||.|++||++.+..+ .+..|...+.++.+ ++++|+++
T Consensus       157 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~  233 (342)
T d2ovrb2         157 FMVKVWDPETETCLHTLQGHTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSG  233 (342)
T ss_dssp             SCEEEEEGGGTEEEEEECCCSSCEEEEE--ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE-ETTEEEEE
T ss_pred             CeEEEeecccceeeEEEcCccccccccc--CCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEec-CCCEEEEE
Confidence            9999999999998888888887766554  57889999999999999999998877 67777777776655 46799999


Q ss_pred             eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc---CCCc
Q psy17902        332 GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD---IPLS  408 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~  408 (454)
                      +.||.|++||+...+....+.....      |...+.++.++  +++|++|+.||+|++||+.+++.+..+..   ..|.
T Consensus       234 s~d~~i~iwd~~~~~~~~~~~~~~~------~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~  305 (342)
T d2ovrb2         234 NADSTVKIWDIKTGQCLQTLQGPNK------HQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG  305 (342)
T ss_dssp             ETTSCEEEEETTTCCEEEEECSTTS------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGT
T ss_pred             cCCCEEEEEecccccccccccccce------eeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCC
Confidence            9999999999998887776654332      44457777664  56999999999999999999988877643   2367


Q ss_pred             eeeeEEEEcCCCCEEEEEecCCCc----eeeeeeeC
Q psy17902        409 GVINSLVFTSDHKHLVAGIGTEHR----FGRWKTIK  440 (454)
Q Consensus       409 ~~v~~l~~s~d~~~l~~~~~~d~~----i~~W~~~~  440 (454)
                      +.|++++|+|++.+|++| +.||.    |++||+..
T Consensus       306 ~~v~~v~~s~~~~~la~g-~~dGt~~~~l~~~Df~~  340 (342)
T d2ovrb2         306 GVVWRIRASNTKLVCAVG-SRNGTEETKLLVLDFDV  340 (342)
T ss_dssp             CEEEEEEECSSEEEEEEE-CSSSSSCCEEEEEECCC
T ss_pred             CCEEEEEECCCCCEEEEE-eCCCCCeeEEEEEeCCC
Confidence            789999999999888888 77774    88888754

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.4e-36  Score=271.93  Aligned_cols=280  Identities=17%  Similarity=0.289  Sum_probs=209.7

Q ss_pred             eEeEeccCCCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        132 VCTKFNGKPHRASI-TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      ...+|+|  |...| +|++|  ++++||||+.||+|+|||+.+++.+..+.      +|..+|.+++|+|+ .+|++|+.
T Consensus         4 ~~~tL~G--H~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~------~H~~~V~~l~~s~~-~~l~s~s~   72 (355)
T d1nexb2           4 QRTTLRG--HMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLS------GHDGGVWALKYAHG-GILVSGST   72 (355)
T ss_dssp             EEEEEEC--CSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEEE------CCSSCEEEEEEETT-TEEEEEET
T ss_pred             CcEEECC--cCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCCcEEEEEE------CCCCCEEEEEEcCC-CEEEEEec
Confidence            4677999  98885 66665  57899999999999999999998877765      68999999999986 58999999


Q ss_pred             CCcEEEEeCC-CccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEe----------------------------
Q psy17902        211 NSNIKLWSSS-LEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWN----------------------------  259 (454)
Q Consensus       211 dg~v~vw~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd----------------------------  259 (454)
                      ||.|++|++. .........  +......+.+.+++.++++++.|+.|++||                            
T Consensus        73 D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (355)
T d1nexb2          73 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY  152 (355)
T ss_dssp             TCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTT
T ss_pred             ccccccccccccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccc
Confidence            9999999983 333322221  222223334444555555555555555555                            


Q ss_pred             -----------------------------------CCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902        260 -----------------------------------IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE  304 (454)
Q Consensus       260 -----------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~  304 (454)
                                                         +.+++.+..+.++...+.++.++|++.++++++.|+.|++||+.+
T Consensus       153 ~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~  232 (355)
T d1nexb2         153 FVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN  232 (355)
T ss_dssp             EEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred             eeeeeeeccccccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccc
Confidence                                               444444555556777888999999999999999999999999999


Q ss_pred             CeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE-EEEecCCCEEEEe
Q psy17902        305 ESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS-VACLHNSDLVASG  382 (454)
Q Consensus       305 ~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~  382 (454)
                      +..+ .+.+|...+.++.+. +++|++++.||.|++||+.+........  +.         .+.+ ..+++++.+|++|
T Consensus       233 ~~~~~~~~~h~~~v~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~---------~~~~~~~~~~~~~~l~~g  300 (355)
T d1nexb2         233 GELMYTLQGHTALVGLLRLS-DKFLVSAAADGSIRGWDANDYSRKFSYH--HT---------NLSAITTFYVSDNILVSG  300 (355)
T ss_dssp             CCEEEEECCCSSCCCEEEEC-SSEEEEECTTSEEEEEETTTCCEEEEEE--CT---------TCCCCCEEEECSSEEEEE
T ss_pred             cccccccccccccccccccc-cceeeeeecccccccccccccceecccc--cC---------CceEEEEEcCCCCEEEEE
Confidence            8877 788899888887764 6799999999999999998876544432  11         1333 4567788777766


Q ss_pred             cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        383 SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       383 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      + ||+|+|||+.+++.+..... .|.++|++++|+|+  .++++++.||.+.+|..
T Consensus       301 ~-d~~i~vwd~~tg~~~~~~~~-~~~~~V~~v~~~~~--~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         301 S-ENQFNIYNLRSGKLVHANIL-KDADQIWSVNFKGK--TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             E-TTEEEEEETTTCCBCCSCTT-TTCSEEEEEEEETT--EEEEEEESSSCEEEEEE
T ss_pred             e-CCEEEEEECCCCCEEEEEec-CCCCCEEEEEEcCC--eEEEEEECCCcEEEEEE
Confidence            5 89999999999988754322 37889999999986  34545589999877754

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.2e-34  Score=268.07  Aligned_cols=280  Identities=18%  Similarity=0.286  Sum_probs=219.4

Q ss_pred             EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeec-------
Q psy17902        157 VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT-------  228 (454)
Q Consensus       157 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~-------  228 (454)
                      .+.+..++.+.+|+......... .+.. ...|...|+||+|+|+|++||+|+ |+.|+||++ ++..+..+.       
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~-~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~  107 (388)
T d1erja_          31 ALKKQTNDYYILYNPALPREIDV-ELHK-SLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANK  107 (388)
T ss_dssp             TSEEECSSCEEEECTTSCCCEEE-EEEE-EEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC------
T ss_pred             ccccCCCCcEEEeCCCCCcceee-eeEe-eCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccc
Confidence            45667788899998765443221 1111 114889999999999999999987 899999999 555554443       


Q ss_pred             -----------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902        229 -----------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSV  297 (454)
Q Consensus       229 -----------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i  297 (454)
                                 .|...|++++|+|++++|++|+.||.|++||...++.+..+.+|...|.++.+++++..+++++.++.+
T Consensus       108 ~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i  187 (388)
T d1erja_         108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV  187 (388)
T ss_dssp             -----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred             cccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccccccccccceee
Confidence                       466779999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeccCCeEEEEccccC-CeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        298 RVWKIQEESQLVFNGHSR-GIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       298 ~i~d~~~~~~~~~~~~~~-~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      ++||+.+........+.. .+.+..++ ++.+|++++.||.|++|++.++.....+.....  ....|...|.+++|+|+
T Consensus       188 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~--~~~~h~~~v~~l~~s~~  265 (388)
T d1erja_         188 RIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE--SGTGHKDSVYSVVFTRD  265 (388)
T ss_dssp             EEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--------CCCSSCEEEEEECTT
T ss_pred             eeeeccccccccccccccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccc--cccCCCCCEEEEEECCC
Confidence            999999988774444444 44444444 467899999999999999999888777653322  22346777999999999


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeE----------eccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEF----------LQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~----------~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +++|++|+.||.|++||+.++.....          .....|...|++++|+|++++|+++ +.||.|++|+..++.
T Consensus       266 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg-~~dg~i~vwd~~~~~  341 (388)
T d1erja_         266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSG-SKDRGVLFWDKKSGN  341 (388)
T ss_dssp             SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEE-ETTSEEEEEETTTCC
T ss_pred             CCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc
Confidence            99999999999999999976533221          1112367889999999999999998 899999999986653

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-35  Score=269.83  Aligned_cols=248  Identities=16%  Similarity=0.188  Sum_probs=202.5

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSSS-LE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-  265 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-  265 (454)
                      ..+|+|++|+|++++||+|+.||.|+||++. ++  .+..+.+|.++|++++|+|++++|++|+.|++|++||+.++.. 
T Consensus         7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~   86 (371)
T d1k8kc_           7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK   86 (371)
T ss_dssp             SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred             CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeecccccc
Confidence            3589999999999999999999999999994 32  5677889999999999999999999999999999999987654 


Q ss_pred             -EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEEec-CCCEEEEEeCCCCEE
Q psy17902        266 -VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTRRV-NDQQFITCGEDGTLS  338 (454)
Q Consensus       266 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~  338 (454)
                       ...+.+|...|++++|+|+++.|++++.|+.|++|++......     ....|...+.++.+. ++.+|++|+.|+.|+
T Consensus        87 ~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~  166 (371)
T d1k8kc_          87 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR  166 (371)
T ss_dssp             EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             cccccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEE
Confidence             3445678999999999999999999999999999998765432     345577778777765 567899999999999


Q ss_pred             EEecCCCccceeeeccc---------CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCce
Q psy17902        339 LWSILKKVPTHTIPVAH---------GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSG  409 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~  409 (454)
                      +|++.............         .......|...|.+++|+|++++|++++.||.|++||+.++..+..+..  |..
T Consensus       167 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~  244 (371)
T d1k8kc_         167 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS--ETL  244 (371)
T ss_dssp             EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC--SSC
T ss_pred             EEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeec--ccc
Confidence            99986643222111000         0001124677799999999999999999999999999999988888876  788


Q ss_pred             eeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        410 VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       410 ~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      +|++++|+|++++|++|  .|+.+++|.....
T Consensus       245 ~v~s~~fs~d~~~la~g--~d~~~~~~~~~~~  274 (371)
T d1k8kc_         245 PLLAVTFITESSLVAAG--HDCFPVLFTYDSA  274 (371)
T ss_dssp             CEEEEEEEETTEEEEEE--TTSSCEEEEEETT
T ss_pred             cceeeeecCCCCEEEEE--cCCceEEEEeeCC
Confidence            99999999999877755  5788777766543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.4e-35  Score=265.99  Aligned_cols=285  Identities=12%  Similarity=0.091  Sum_probs=217.2

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCC-eEEEEEcCCCceecccCCcccCCCC-CCceEEEEEeC--CCcEEEEecCCCcEEEEe
Q psy17902        143 ASITCIAVTSDSKHVYSACKDG-IIIKWLLETRSKVCSSPFVKTDRKS-YPPILALAVAN--NNELVASGDNNSNIKLWS  218 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~--~~~~l~~~~~dg~v~vw~  218 (454)
                      +.+++++|+|+++.|+.++.+. .|+.|+........    .....+| ...|++++|+|  ++.+|++|+.||+|+|||
T Consensus        18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~----~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd   93 (325)
T d1pgua1          18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPP----VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG   93 (325)
T ss_dssp             TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCS----EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred             CCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccc----eEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEee
Confidence            3568999999999999887654 34556543322211    1111234 56899999998  578999999999999999


Q ss_pred             C-CCcc--------EEeecccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        219 S-SLEH--------LHTFTGHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       219 ~-~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      + ....        ...+..|.++|.+++|++++.+|++++.  ++.+.+|+..+++.+..+.+|...|++++|+|++.+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  173 (325)
T d1pgua1          94 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM  173 (325)
T ss_dssp             EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred             ecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccc
Confidence            8 2221        1234578899999999999999988765  678999999999999999999999999999999865


Q ss_pred             -EEEeeCCCcEEEeeccCCeEE-E---EccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902        288 -ISSGGTDKSVRVWKIQEESQL-V---FNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS  360 (454)
Q Consensus       288 -l~~~~~dg~i~i~d~~~~~~~-~---~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  360 (454)
                       +++++.|+.|++||+...+.. .   ...|...+.++.+.+  +.+|++++.||.|++||+.+++.+..+..+...   
T Consensus       174 ~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~---  250 (325)
T d1pgua1         174 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP---  250 (325)
T ss_dssp             EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBC---
T ss_pred             eEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccc---
Confidence             778999999999999876655 2   335566788887764  568899999999999999999888877643321   


Q ss_pred             CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC-CEEEEEecCCCceeeeee
Q psy17902        361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH-KHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~-~~l~~~~~~d~~i~~W~~  438 (454)
                        +...+.++.| |++.+|++++.|+.|+|||+.+++++..+....+...+..++|.+.+ .+|+++ +.||.|++|++
T Consensus       251 --v~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-s~dg~i~vwdl  325 (325)
T d1pgua1         251 --VQGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL-SLDGTLNFYEL  325 (325)
T ss_dssp             --CCSCEEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEE-ETTSCEEEEET
T ss_pred             --cccceeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCCEEEEE-ECCCEEEEEEC
Confidence              2222444444 67889999999999999999999988887764454445555554433 467776 89999999984

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.1e-34  Score=259.42  Aligned_cols=300  Identities=10%  Similarity=0.088  Sum_probs=219.6

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~  210 (454)
                      .++.+++  |.+.|++|+|+|++++||+|+.||+|+|||+.+......+..   ..+|..+|.+++|+|+ +.+|++|+.
T Consensus         3 ~v~~~~~--h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~---~~~h~~~V~~v~f~~~~~~~l~sg~~   77 (342)
T d1yfqa_           3 IVQIEQA--PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ---SLRYKHPLLCCNFIDNTDLQIYVGTV   77 (342)
T ss_dssp             EEECSSC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE---EEECSSCEEEEEEEESSSEEEEEEET
T ss_pred             eEEcCCC--CCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEE---ecCCCCCEEEEEEeCCCCCEEEEccc
Confidence            3455667  999999999999999999999999999999987554322211   1147889999999986 568999999


Q ss_pred             CCcEEEEeC-CCccEEeeccc-CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE----Eeec--cCCceeEEEee
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGH-KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE----TLFG--HQSAITSLDIL  282 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~----~~~~--~~~~v~~~~~~  282 (454)
                      ||.|++|++ ..........+ ........+.++...+++++.++.+++||++.+....    ....  .......+.+.
T Consensus        78 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (342)
T d1yfqa_          78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD  157 (342)
T ss_dssp             TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred             ccceeeeecccccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeee
Confidence            999999999 44444444433 3444555667788999999999999999986543322    2222  22344567778


Q ss_pred             cCCCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEE-ec-CCCEEEEEeCCCCEEEEecCCCccce------e
Q psy17902        283 AKNRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTR-RV-NDQQFITCGEDGTLSLWSILKKVPTH------T  350 (454)
Q Consensus       283 ~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~-~~-~~~~l~~~~~dg~i~iwd~~~~~~~~------~  350 (454)
                      +.+..+++++.|+.|++|++......    ..........+.. ++ .+..+++++.||.+.+|++.......      .
T Consensus       158 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~  237 (342)
T d1yfqa_         158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA  237 (342)
T ss_dssp             ECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred             ccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccce
Confidence            88999999999999999999875543    2233333333333 33 46789999999999999986543221      2


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      +...........|...+++++|+|++++||+|+.||.|++||+.+++.+..+..   ...+..++|+|++++|++++ .|
T Consensus       238 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~---~~~~~~~~~s~~~~~l~~a~-sd  313 (342)
T d1yfqa_         238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK---FNEDSVVKIACSDNILCLAT-SD  313 (342)
T ss_dssp             EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC---CSSSEEEEEEECSSEEEEEE-EC
T ss_pred             eeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecC---CCCCEEEEEEeCCCEEEEEE-cC
Confidence            222222233345667799999999999999999999999999999988877653   23455678899999999984 56


Q ss_pred             CceeeeeeeC
Q psy17902        431 HRFGRWKTIK  440 (454)
Q Consensus       431 ~~i~~W~~~~  440 (454)
                      +.+++|....
T Consensus       314 d~~~~~~~~~  323 (342)
T d1yfqa_         314 DTFKTNAAID  323 (342)
T ss_dssp             THHHHCSSSC
T ss_pred             CcEEEeeeeC
Confidence            6788887543

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.6e-33  Score=250.36  Aligned_cols=255  Identities=15%  Similarity=0.192  Sum_probs=201.0

Q ss_pred             eeEeEeccCCCC-CCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceecccCCc--ccCCCCCCceEEEEEeCCCcEE
Q psy17902        131 VVCTKFNGKPHR-ASITCIAVTS--DSKHVYSACKDGIIIKWLLETRSKVCSSPFV--KTDRKSYPPILALAVANNNELV  205 (454)
Q Consensus       131 ~~~~~~~~~~h~-~~V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l  205 (454)
                      .....+.+  |. ..|++++|+|  ++.+|++|+.||+|+|||+............  .....+..+|.+++|++++++|
T Consensus        53 ~~~~~~~g--h~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l  130 (325)
T d1pgua1          53 PPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRL  130 (325)
T ss_dssp             CSEEEECT--TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred             cceEEEeC--CCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCcc
Confidence            34566777  74 6799999998  5689999999999999998765443322211  1112477789999999999998


Q ss_pred             EEecC--CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEe---eccCCceeE
Q psy17902        206 ASGDN--NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITS  278 (454)
Q Consensus       206 ~~~~~--dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~  278 (454)
                      ++++.  ++.+.+|+. .+..+..+.+|...|.+++|+|++.+ +++++.|+.|++||+...+....+   ..|...|++
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~  210 (325)
T d1pgua1         131 CVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD  210 (325)
T ss_dssp             EEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred             ceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEE
Confidence            87754  678999999 67888899999999999999998865 678999999999999888766554   357788999


Q ss_pred             EEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCe----EEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        279 LDILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGI----DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       279 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i----~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      ++|+|+ +.+|++++.|+.|++||+++++.+ .+.+|...+    .+..++++.+|++++.|+.|+|||+.+++++..+.
T Consensus       211 v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~  290 (325)
T d1pgua1         211 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT  290 (325)
T ss_dssp             EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred             eeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEE
Confidence            999997 588999999999999999998877 566666554    44556788999999999999999999999888876


Q ss_pred             cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      .....     ......++.+.++ .+|++|+.||+|++||+
T Consensus       291 ~~~~~-----~~~~~~~~~~~~~-~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         291 LDKQQ-----LGNQQVGVVATGN-GRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             CCTTC-----GGGCEEEEEEEET-TEEEEEETTSCEEEEET
T ss_pred             ecCCc-----ccCeEEEEEECCC-CEEEEEECCCEEEEEEC
Confidence            54321     1111334444443 37899999999999996

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-32  Score=246.25  Aligned_cols=244  Identities=21%  Similarity=0.383  Sum_probs=220.8

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN  211 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d  211 (454)
                      ....|.+  |.+.|.+++|+|++.++++++.++.+.+|+...........      .+...+.++.|++++..+++++.|
T Consensus        51 ~~~~~~~--h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d  122 (317)
T d1vyhc1          51 FERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH------GHDHNVSSVSIMPNGDHIVSASRD  122 (317)
T ss_dssp             CCEEECC--CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred             EEEEEeC--CCCcEEEEeeecccccccccccccccccccccccccccccc------cccccceeeeccCCCceEEeeccC
Confidence            4567788  99999999999999999999999999999998877666554      588899999999999999999999


Q ss_pred             CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-----
Q psy17902        212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-----  285 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-----  285 (454)
                      +.+++|++ .+..+..+..|...+.+++|++++.+|++++.|+.|++|++.++..+..+.+|...+.++.|+|++     
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  202 (317)
T d1vyhc1         123 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI  202 (317)
T ss_dssp             SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred             cceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeecccccee
Confidence            99999999 777888899999999999999999999999999999999999999999999999999999998753     


Q ss_pred             ---------------CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        286 ---------------RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       286 ---------------~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                                     .++++++.|+.|++||+.++..+ .+.+|...+..+.+. ++.+|++++.||.|++||+.+++++
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  282 (317)
T d1vyhc1         203 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM  282 (317)
T ss_dssp             GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred             eccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEE
Confidence                           47889999999999999999887 778888888877765 5678999999999999999999998


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      ..+..         |...|++++|+|++++|++|+.||+|+|||
T Consensus       283 ~~~~~---------h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         283 KTLNA---------HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEEC---------CSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred             EEEcC---------CCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence            88864         445599999999999999999999999997

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-32  Score=241.33  Aligned_cols=271  Identities=23%  Similarity=0.439  Sum_probs=214.3

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      +.+.+  |...|+|++|  ++++||||+.||+|+|||+.+++.+..+.      +|...|++++|  ++++|++|+.||.
T Consensus         9 ~~~~~--~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~------~H~~~V~~v~~--~~~~l~s~s~D~~   76 (293)
T d1p22a2           9 HCRSE--TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT------GHTGSVLCLQY--DERVIITGSSDST   76 (293)
T ss_dssp             ECCCS--SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC------CCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred             eccCC--CCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEe------cCCCCEeeeec--ccceeeccccccc
Confidence            34455  8899999765  78999999999999999999998887776      68999999887  5779999999999


Q ss_pred             EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEeecCCCEEE
Q psy17902        214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      |++|++ .+........+....  ..+.+....++++..++.+.+|+......   ...+..|...|.++.+.  ...++
T Consensus        77 i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~  152 (293)
T d1p22a2          77 VRVWDVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIV  152 (293)
T ss_dssp             EEEEESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEE
T ss_pred             cccccccccccccccccccccc--ccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccc
Confidence            999999 444444444443333  34455677899999999999999887643   34556788888877775  45788


Q ss_pred             EeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902        290 SGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT  368 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~  368 (454)
                      +++.|+.|++||+++++.+ .+.++...+..+.+ ++..+++++.||.|++||+.+...+......         ...+.
T Consensus       153 ~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------~~~v~  222 (293)
T d1p22a2         153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEGH---------EELVR  222 (293)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECCC---------SSCEE
T ss_pred             cccCCCceeeecCCCCcEEEEEcccccccccccC-CCCeEEEecCCCEEEEEecccceeeeeeccc---------ceeee
Confidence            8999999999999998877 66677777766554 4678999999999999999998887776532         22354


Q ss_pred             EEEEecCCCEEEEecCCCcEEEEEcCCC---------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902        369 SVACLHNSDLVASGSYDGCVKLWKITPK---------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK  437 (454)
Q Consensus       369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~---------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~  437 (454)
                      .  +++++.+|++|+.||.|++||+...         ..+..+..  |.+.|++++|+  +.+|+++ |.|+.|++||
T Consensus       223 ~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--H~~~V~~v~~d--~~~l~s~-s~Dg~i~iWD  293 (293)
T d1p22a2         223 C--IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQFD--EFQIVSS-SHDDTILIWD  293 (293)
T ss_dssp             E--EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEEC--SSCEEEC-CSSSEEEEEC
T ss_pred             e--ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecC--CCCCEEEEEEc--CCEEEEE-ecCCEEEEeC
Confidence            4  5668889999999999999997542         34455554  88999999995  5678877 8999999997

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-32  Score=254.79  Aligned_cols=287  Identities=14%  Similarity=0.194  Sum_probs=206.1

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE---eC----CCcEE
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV---AN----NNELV  205 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~----~~~~l  205 (454)
                      ....++  |.+.|+++++++  ++|+|++.|++|+|||..+...............+...+..+..   .+    ++.++
T Consensus         7 ~~~~~~--H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (393)
T d1sq9a_           7 ANAGKA--HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV   82 (393)
T ss_dssp             EEESSC--SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred             eecCCc--ccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEE
Confidence            345566  999999999875  79999999999999998765432211111111123333322222   11    23578


Q ss_pred             EEecCCCcEEEEeC-CCcc---EE-------eecccCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEeCCCce-----
Q psy17902        206 ASGDNNSNIKLWSS-SLEH---LH-------TFTGHKAPITGLAISFE-----CDTLYSSSNDRSIKVWNIEDRA-----  264 (454)
Q Consensus       206 ~~~~~dg~v~vw~~-~~~~---~~-------~~~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~iwd~~~~~-----  264 (454)
                      ++++.||.|++|++ ....   ..       ....+...+..++|.++     +.++++++.||.|++|++....     
T Consensus        83 ~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~  162 (393)
T d1sq9a_          83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS  162 (393)
T ss_dssp             EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred             EEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccce
Confidence            89999999999997 2111   11       11235567888888775     4688999999999999974211     


Q ss_pred             -------------eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-------EEccccCCeEEEEec-
Q psy17902        265 -------------YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-------VFNGHSRGIDMTRRV-  323 (454)
Q Consensus       265 -------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-------~~~~~~~~i~~~~~~-  323 (454)
                                   .......+...+++++|+|++ +|++|+.|++|++||+.+++.+       .+.+|...|.++.+. 
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~sp  241 (393)
T d1sq9a_         163 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP  241 (393)
T ss_dssp             TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred             eeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEccccc
Confidence                         111122456678999999987 8899999999999999988765       345688889888775 


Q ss_pred             CCCEEEEEeCCCC---EEEEecCCCccceeeecccCC----CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902        324 NDQQFITCGEDGT---LSLWSILKKVPTHTIPVAHGY----DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK  396 (454)
Q Consensus       324 ~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~  396 (454)
                      ++.+|++|+.|++   |++||+.++..+..+......    ....+|..+|++++|+|++++|++|+.|++|+|||+.++
T Consensus       242 dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g  321 (393)
T d1sq9a_         242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK  321 (393)
T ss_dssp             STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred             ccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCC
Confidence            5788999998875   899999999888877533221    122357888999999999999999999999999999999


Q ss_pred             ceeeEeccCCCceeee----EEEEcCCCCEEEEE
Q psy17902        397 RTLEFLQDIPLSGVIN----SLVFTSDHKHLVAG  426 (454)
Q Consensus       397 ~~~~~~~~~~~~~~v~----~l~~s~d~~~l~~~  426 (454)
                      +++..+.+  |...|.    .++|+|++..++++
T Consensus       322 ~~~~~l~g--H~~~v~~~~~~~~~~~~~~~~~~~  353 (393)
T d1sq9a_         322 ERITTLNM--HCDDIEIEEDILAVDEHGDSLAEP  353 (393)
T ss_dssp             EEEEEEEC--CGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred             CEEEEECC--cCCcccCCccEEEECCCCCEEEEc
Confidence            99999886  666554    46777777766543

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-32  Score=241.38  Aligned_cols=268  Identities=15%  Similarity=0.196  Sum_probs=208.7

Q ss_pred             eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902        131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN  210 (454)
Q Consensus       131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~  210 (454)
                      .++++|.|  |.++|++++|+|    |+||+.||+|++||+.+..           ..|...|.++++++++ .+++++.
T Consensus         4 ~~i~~l~g--H~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----------~~h~~~V~~~~~~~~~-~~~s~s~   65 (287)
T d1pgua2           4 EVLKTISG--HNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----------QDHSNLIVSLDNSKAQ-EYSSISW   65 (287)
T ss_dssp             EEEEEECC--CSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----------CCCCSCEEEEECCSTT-CCEEEET
T ss_pred             ceeEEECC--CCCceEEEEECc----EEEEeCCCeEEEEECCCCC-----------CCCCCCEEEEEecCCC-eEEEEee
Confidence            35788999  999999999987    9999999999999987532           1578899999998765 5788999


Q ss_pred             CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                      |++|++|++...      .....+.++++++++..++++ .++.+.+|+..++..+..+..+ ..+  .++++++..+++
T Consensus        66 D~~v~~w~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v  135 (287)
T d1pgua2          66 DDTLKVNGITKH------EFGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQNYVAV  135 (287)
T ss_dssp             TTEEEETTEEEE------ECSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECS-SCE--EEEEECSSEEEE
T ss_pred             cccccccccccc------ccccceeeeeeccCCceEEEe-ecccceeeeccceeeeeecccc-cee--eeeeccCcceee
Confidence            999999996321      133457788898887666655 5667899999999888777533 333  456677888887


Q ss_pred             eeCCC-cEEEeeccCCeEEE--EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902        291 GGTDK-SVRVWKIQEESQLV--FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW  366 (454)
Q Consensus       291 ~~~dg-~i~i~d~~~~~~~~--~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  366 (454)
                      ++.++ .|++|++.......  ...+...+.++.+. ++.+|++|+.||.|++||+.++........        .|...
T Consensus       136 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~--------~h~~~  207 (287)
T d1pgua2         136 GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWA--------FRTSK  207 (287)
T ss_dssp             EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSC--------CCSSC
T ss_pred             eccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeeccccccccccc--------ccccc
Confidence            77765 79999997655542  23456677776655 567899999999999999988766543222        25566


Q ss_pred             EEEEEEecC----------CCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        367 ITSVACLHN----------SDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       367 i~~~~~s~~----------~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      |.+++|+|.          +.+|++|+.|++|+|||+..+ ..+..+..  |.+.|++++|+|++ .|+++ |.|+.|++
T Consensus       208 v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~--h~~~V~~v~~~~~~-~l~s~-g~D~~v~i  283 (287)
T d1pgua2         208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA--HKDGVNNLLWETPS-TLVSS-GADACIKR  283 (287)
T ss_dssp             EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS--STTCEEEEEEEETT-EEEEE-ETTSCEEE
T ss_pred             cceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCC--CCCCeEEEEECCCC-EEEEE-ECCCeEEE
Confidence            999999875          458999999999999999774 55555554  88999999999986 57776 78999999


Q ss_pred             eee
Q psy17902        436 WKT  438 (454)
Q Consensus       436 W~~  438 (454)
                      |++
T Consensus       284 W~i  286 (287)
T d1pgua2         284 WNV  286 (287)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            986

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.1e-31  Score=239.02  Aligned_cols=242  Identities=17%  Similarity=0.196  Sum_probs=190.9

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA  264 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  264 (454)
                      .+|..+|++++|+|++++|++|+.||.|++||+ ++..+..+ ..|...|++++|+|++. +++++.|+.+++|++....
T Consensus         9 ~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~d~~v~~~~~~~~~   87 (299)
T d1nr0a2           9 YGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LFTVSWDDHLKVVPAGGSG   87 (299)
T ss_dssp             CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EEEEETTTEEEEECSSSSS
T ss_pred             CCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce-eecccceeeEEEeccCCcc
Confidence            389999999999999999999999999999999 56666666 46899999999999986 5667789999999986543


Q ss_pred             e---EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCCCCEEEE
Q psy17902        265 Y---VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLW  340 (454)
Q Consensus       265 ~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iw  340 (454)
                      .   ......+...+.+++|+|++.+++++ .++.+.+|+.......  . ....+.++.+ +++.+|++++.||.|++|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~-~~~~i~~~~~~~~~~~--~-~~~~~~~~~~s~~~~~l~~g~~dg~i~~~  163 (299)
T d1nr0a2          88 VDSSKAVANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSHGKLTEV--P-ISYNSSCVALSNDKQFVAVGGQDSKVHVY  163 (299)
T ss_dssp             SCTTSCCEEECSSCEEEEEECTTSSCEEEE-ESSEEEEEETTEEEEE--E-CSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred             cccccccccccccccccccccccccccccc-cccccccccccccccc--c-ccccccccccccccccccccccccccccc
Confidence            2   12233577889999999999887765 4568999986532222  1 2223444444 567789999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCC
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSD  419 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d  419 (454)
                      |+.++.........        |...|++++|+|++.+|++++.||.|++||+.++..+..... ..|..+|++++|+|+
T Consensus       164 d~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~  235 (299)
T d1nr0a2         164 KLSGASVSEVKTIV--------HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD  235 (299)
T ss_dssp             EEETTEEEEEEEEE--------CSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT
T ss_pred             cccccccccccccc--------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99877654433322        345599999999999999999999999999988765544332 237889999999999


Q ss_pred             CCEEEEEecCCCceeeeeeeCCC
Q psy17902        420 HKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       420 ~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      +.+|+++ +.|+.|++|+...+.
T Consensus       236 ~~~l~sg-s~dg~i~iwd~~~~~  257 (299)
T d1nr0a2         236 NVRLATG-SLDNSVIVWNMNKPS  257 (299)
T ss_dssp             SSEEEEE-ETTSCEEEEETTCTT
T ss_pred             ccceEEE-cCCCEEEEEECCCCC
Confidence            9999998 899999999976554

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-30  Score=236.08  Aligned_cols=244  Identities=18%  Similarity=0.333  Sum_probs=206.9

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---  263 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---  263 (454)
                      +|..+|++++|+|++.+||+|+.||.|+|||+ ++..+..+..|...|.+++|+|++.++++|+.|+.+.+|+....   
T Consensus        53 GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  132 (340)
T d1tbga_          53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN  132 (340)
T ss_dssp             CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSC
T ss_pred             CCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeecccccccccc
Confidence            79999999999999999999999999999999 77888899999999999999999999999999999999997654   


Q ss_pred             -eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEE
Q psy17902        264 -AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLW  340 (454)
Q Consensus       264 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iw  340 (454)
                       .....+.+|.......... .+..++....+.....+........ ....+...+...... ....+++++.|+.|++|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~  211 (340)
T d1tbga_         133 VRVSRELAGHTGYLSCCRFL-DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW  211 (340)
T ss_dssp             CCEEEEECCCSSCEEEEEEE-ETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred             cccceecccccccccccccc-cccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCceEEEE
Confidence             3445566777776666555 4556777888999999988876665 444555555555544 56788999999999999


Q ss_pred             ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      |+.++.++..+..         |...|++++|+|++++|++|+.||.|++|++.....+..+....+...|++++|+|++
T Consensus       212 d~~~~~~~~~~~~---------h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~  282 (340)
T d1tbga_         212 DVREGMCRQTFTG---------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG  282 (340)
T ss_dssp             ETTTTEEEEEECC---------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSS
T ss_pred             ECCCCcEEEEEeC---------CCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCC
Confidence            9999988887753         4455999999999999999999999999999998888777666677889999999999


Q ss_pred             CEEEEEecCCCceeeeeeeCCC
Q psy17902        421 KHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++|+++ +.||.|++|+...+.
T Consensus       283 ~~l~~g-~~dg~i~iwd~~~~~  303 (340)
T d1tbga_         283 RLLLAG-YDDFNCNVWDALKAD  303 (340)
T ss_dssp             CEEEEE-ETTSCEEEEETTTCC
T ss_pred             CEEEEE-ECCCEEEEEECCCCc
Confidence            999998 899999999976553

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.97  E-value=9.4e-31  Score=238.88  Aligned_cols=283  Identities=9%  Similarity=0.065  Sum_probs=217.4

Q ss_pred             EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--cEEEEeCCCc
Q psy17902        146 TCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--NIKLWSSSLE  222 (454)
Q Consensus       146 ~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~~~~  222 (454)
                      ..-.||| ||+++|+++ +|.|++||+.++.....        .|...|.+++|+|||++|++++.+.  .|++||..+.
T Consensus         6 ~~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~--------~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~   76 (360)
T d1k32a3           6 FAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG   76 (360)
T ss_dssp             GEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC--------SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC
T ss_pred             hcccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc--------cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCC
Confidence            4567999 999999987 48999999988765542        4777899999999999998776543  7999999888


Q ss_pred             cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee----------
Q psy17902        223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG----------  292 (454)
Q Consensus       223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------  292 (454)
                      .+..+..|...|.+++|+|++++|++++.++.+++|++.+++....+..|...+.+++|+|+|++|+.++          
T Consensus        77 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~  156 (360)
T d1k32a3          77 KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY  156 (360)
T ss_dssp             CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred             cEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccceeeeeeeccccccceeec
Confidence            8888999999999999999999999999999999999999999888889999999999999999998643          


Q ss_pred             CCCcEEEeeccCCeEEEEccccCCeEE-EEecCCCEEEEEeCCCCEEEEecCCCccc-------eeeecccCCC------
Q psy17902        293 TDKSVRVWKIQEESQLVFNGHSRGIDM-TRRVNDQQFITCGEDGTLSLWSILKKVPT-------HTIPVAHGYD------  358 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~~~~~~~~~i~~-~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~------  358 (454)
                      .++.+++|++.++.......+...... .+.+++.+|++++.++.+.+|+.......       ..+.......      
T Consensus       157 ~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  236 (360)
T d1k32a3         157 VMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLV  236 (360)
T ss_dssp             CEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCC
T ss_pred             cccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceEC
Confidence            345699999999888766666665554 45567789999999999999987543211       1111100000      


Q ss_pred             -------C--------------CCCCCCcEEEEEEecCCC-------------EEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        359 -------S--------------SSSEPNWITSVACLHNSD-------------LVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       359 -------~--------------~~~~~~~i~~~~~s~~~~-------------~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                             .              ..........+...+++.             ++++++.++.|++||+.+++...    
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~----  312 (360)
T d1k32a3         237 PRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTE----  312 (360)
T ss_dssp             CGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEE----
T ss_pred             CCcCcccccceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEE----
Confidence                   0              001112233343333322             45566778899999998865422    


Q ss_pred             CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCee
Q psy17902        405 IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKN  444 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~  444 (454)
                        +.+.|.+++|||||++|+++ +.||.|++|+...+...
T Consensus       313 --~~~~v~~~~~SpDG~~l~~~-~~Dg~i~v~d~~~~~~~  349 (360)
T d1k32a3         313 --VKNNLTDLRLSADRKTVMVR-KDDGKIYTFPLEKPEDE  349 (360)
T ss_dssp             --EEEEEEEEEECTTSCEEEEE-ETTSCEEEEESSCTTSC
T ss_pred             --ecCCcCEEEECCCCCEEEEE-ECCCeEEEEECCCCCcc
Confidence              45679999999999999998 88999999998776543

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=3.5e-29  Score=227.32  Aligned_cols=257  Identities=18%  Similarity=0.271  Sum_probs=190.3

Q ss_pred             cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceE
Q psy17902        115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIL  194 (454)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~  194 (454)
                      ++.+..|-..    .......|.+  |.+.|++++|+|+ ++|++|+.||.|++|++............    .+.....
T Consensus        32 Dg~i~vWd~~----~~~~~~~l~~--H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~~~~~----~~~~~~~  100 (355)
T d1nexb2          32 DKMIRVYDSI----NKKFLLQLSG--HDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGH----NSTVRCL  100 (355)
T ss_dssp             TTEEEEEETT----TTEEEEEEEC--CSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEEECCC----SSCEEEE
T ss_pred             CCeEEEEECC----CCcEEEEEEC--CCCCEEEEEEcCC-CEEEEEecccccccccccccccccccccc----ccccccc
Confidence            3455555322    2345678889  9999999999985 68999999999999999887655433221    1222334


Q ss_pred             EEEEeCCCcEEEEecCCCcEEEEeC-------------------------------------------------------
Q psy17902        195 ALAVANNNELVASGDNNSNIKLWSS-------------------------------------------------------  219 (454)
Q Consensus       195 ~~~~~~~~~~l~~~~~dg~v~vw~~-------------------------------------------------------  219 (454)
                      .+.+.+++.++++++.|+.|++|++                                                       
T Consensus       101 ~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d  180 (355)
T d1nexb2         101 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD  180 (355)
T ss_dssp             EEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETT
T ss_pred             ccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccccccceeeeeccc
Confidence            4455556666666666666666654                                                       


Q ss_pred             ---------CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902        220 ---------SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       220 ---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~  290 (454)
                               ....+.....+...+.++.|+|++.++++++.|+.|++||+.++..+..+.+|...|.+++++  +++|++
T Consensus       181 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~  258 (355)
T d1nexb2         181 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVS  258 (355)
T ss_dssp             SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEEC--SSEEEE
T ss_pred             ceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccccccccc--cceeee
Confidence                     222333445567788899999999999999999999999999999999999999999999986  579999


Q ss_pred             eeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902        291 GGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV  370 (454)
Q Consensus       291 ~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  370 (454)
                      |+.||.|++||+.+........+........+++++.+++++.||.|++||+++++.+.....        .|...|+++
T Consensus       259 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~~~~~--------~~~~~V~~v  330 (355)
T d1nexb2         259 AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANIL--------KDADQIWSV  330 (355)
T ss_dssp             ECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCCSCTT--------TTCSEEEEE
T ss_pred             eecccccccccccccceecccccCCceEEEEEcCCCCEEEEEeCCEEEEEECCCCCEEEEEec--------CCCCCEEEE
Confidence            999999999999987765333333333444555555566666799999999999887754322        245669999


Q ss_pred             EEecCCCEEEEecCCCcEEEEEc
Q psy17902        371 ACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       371 ~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                      +|+|+ .+|++++.||+++||.+
T Consensus       331 ~~~~~-~~~~~~s~dg~~~l~~~  352 (355)
T d1nexb2         331 NFKGK-TLVAAVEKDGQSFLEIL  352 (355)
T ss_dssp             EEETT-EEEEEEESSSCEEEEEE
T ss_pred             EEcCC-eEEEEEECCCcEEEEEE
Confidence            99986 47888999999776654

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.8e-28  Score=226.74  Aligned_cols=249  Identities=15%  Similarity=0.176  Sum_probs=185.6

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc------cEEeecccCCCeEEEEEc------C-CCCEEEEEeCC
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE------HLHTFTGHKAPITGLAIS------F-ECDTLYSSSND  252 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~------~~~~~~~~~~~v~~~~~~------~-~~~~l~~~~~d  252 (454)
                      .+|...|.++++++  ++|++++.|++|+|||.. ..      .......|...+..+...      . ++.++++++.|
T Consensus        11 ~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d   88 (393)
T d1sq9a_          11 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS   88 (393)
T ss_dssp             SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred             CcccCccEEEEEeC--CEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCC
Confidence            47999999999864  689999999999999972 21      223333455444333221      1 23467899999


Q ss_pred             CcEEEEeCCCceeEEE-----e-----eccCCceeEEEeecC-----CCEEEEeeCCCcEEEeeccCCeE----------
Q psy17902        253 RSIKVWNIEDRAYVET-----L-----FGHQSAITSLDILAK-----NRVISSGGTDKSVRVWKIQEESQ----------  307 (454)
Q Consensus       253 g~i~iwd~~~~~~~~~-----~-----~~~~~~v~~~~~~~~-----~~~l~~~~~dg~i~i~d~~~~~~----------  307 (454)
                      |.|++|++........     .     ..+...+..++|.++     +.++++++.||.+++|++.....          
T Consensus        89 g~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~  168 (393)
T d1sq9a_          89 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS  168 (393)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred             CcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeec
Confidence            9999999754322111     1     124556778888765     46889999999999999853211          


Q ss_pred             --E-------EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902        308 --L-------VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL  378 (454)
Q Consensus       308 --~-------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~  378 (454)
                        .       ....+...+.++.+.++.+|++|+.||+|+|||+.+++++..+......   ..|..+|++++|+|+|++
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l---~~h~~~V~~l~~spdg~~  245 (393)
T d1sq9a_         169 PTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSM---INNSNSIRSVKFSPQGSL  245 (393)
T ss_dssp             CEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC------CCCCCEEEEEECSSTTE
T ss_pred             cceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeeccccccccccccccc---ccccceEEEcccccccce
Confidence              0       1122334466777878889999999999999999999888877654432   247788999999999999


Q ss_pred             EEEecCCCc---EEEEEcCCCceeeEeccC-----------CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        379 VASGSYDGC---VKLWKITPKRTLEFLQDI-----------PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       379 l~~~~~dg~---v~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      |++|+.|++   |++||+.++..+..+...           .|.+.|++|+|+||+++|+++ |.|+.|++|+..++
T Consensus       246 l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~-s~D~~v~vWd~~~g  321 (393)
T d1sq9a_         246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSA-GWDGKLRFWDVKTK  321 (393)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEE-ETTSEEEEEETTTT
T ss_pred             eeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEE-CCCCEEEEEECCCC
Confidence            999999874   999999999877776421           388899999999999999998 89999999998776

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.5e-27  Score=212.12  Aligned_cols=234  Identities=20%  Similarity=0.376  Sum_probs=193.0

Q ss_pred             CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902        188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                      +|...|.+ +++++|++||+|+.||.|+|||+ +++.+.++.+|...|.+++|+|+  +|++|+.|+.+++|+.......
T Consensus        14 GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~   90 (342)
T d2ovrb2          14 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI   90 (342)
T ss_dssp             CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEE
T ss_pred             CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCC--ccccceecccccccccccccce
Confidence            79888865 46667899999999999999999 78889999999999999999864  9999999999999999988877


Q ss_pred             EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc
Q psy17902        267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      .....+...+......  ...++.+..|+.+.+|+..++......................+++++.|+.|++||+....
T Consensus        91 ~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~  168 (342)
T d2ovrb2          91 HTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETET  168 (342)
T ss_dssp             EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTE
T ss_pred             ecccccceeEeeeecc--cccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccce
Confidence            7766666666655543  46777889999999999999887755555555555666677889999999999999998888


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      .+..+..+.           .....+++++.+|++|+.||.|++||+..++.+..+..  |...+.++++++  .+|+++
T Consensus       169 ~~~~~~~~~-----------~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~--~~l~s~  233 (342)
T d2ovrb2         169 CLHTLQGHT-----------NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELKD--NILVSG  233 (342)
T ss_dssp             EEEEECCCS-----------SCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEET--TEEEEE
T ss_pred             eeEEEcCcc-----------cccccccCCCCEEEEEeCCCeEEEeecccceeeeEecc--cccceeEEecCC--CEEEEE
Confidence            777765322           33445566888999999999999999999998888876  778888887764  588888


Q ss_pred             ecCCCceeeeeeeCCC
Q psy17902        427 IGTEHRFGRWKTIKGV  442 (454)
Q Consensus       427 ~~~d~~i~~W~~~~~~  442 (454)
                       +.|+.|++|+.....
T Consensus       234 -s~d~~i~iwd~~~~~  248 (342)
T d2ovrb2         234 -NADSTVKIWDIKTGQ  248 (342)
T ss_dssp             -ETTSCEEEEETTTCC
T ss_pred             -cCCCEEEEEeccccc
Confidence             899999999976543

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=7.3e-28  Score=217.08  Aligned_cols=248  Identities=14%  Similarity=0.107  Sum_probs=184.4

Q ss_pred             CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCcc---EEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCC
Q psy17902        187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEH---LHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~  261 (454)
                      .+|...|++|+|+|++++||+|+.||+|+|||+ ....   +....+|..+|.+++|+|++ .+|++|+.||.|++|++.
T Consensus         8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~   87 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI   87 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred             CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeecc
Confidence            378899999999999999999999999999998 3333   33344699999999999864 589999999999999999


Q ss_pred             CceeEEEeeccCCc-eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-----EEccccC---CeEEEEecCCCEEEEEe
Q psy17902        262 DRAYVETLFGHQSA-ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-----VFNGHSR---GIDMTRRVNDQQFITCG  332 (454)
Q Consensus       262 ~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~---~i~~~~~~~~~~l~~~~  332 (454)
                      ..........+... .....+.++...+++++.++.+++||++.....     ....+..   .........+..+++++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (342)
T d1yfqa_          88 GSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGM  167 (342)
T ss_dssp             SSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCceeeec
Confidence            88777666554444 345556677889999999999999998764332     1111111   12234455778899999


Q ss_pred             CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe-cCCCEEEEecCCCcEEEEEcCCCceeeE----------
Q psy17902        333 EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL-HNSDLVASGSYDGCVKLWKITPKRTLEF----------  401 (454)
Q Consensus       333 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~v~iwd~~~~~~~~~----------  401 (454)
                      .|+.|++|++...............      ...+.+..+. +++..+++++.||.+.+|++........          
T Consensus       168 ~d~~i~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~  241 (342)
T d1yfqa_         168 NNSQVQWFRLPLCEDDNGTIEESGL------KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH  241 (342)
T ss_dssp             STTEEEEEESSCCTTCCCEEEECSC------SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred             CCCcEEEEecccCcccceeeeeccc------ccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeee
Confidence            9999999999887665554433221      2225555544 5677999999999999999865421110          


Q ss_pred             ---eccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        402 ---LQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       402 ---~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                         .....|...|++++|+|++++|++| |.||.|++||...+
T Consensus       242 ~~~~~~~~~~~~v~~l~~sp~~~~lasg-~~Dg~v~vWD~~~~  283 (342)
T d1yfqa_         242 RLNLKDTNLAYPVNSIEFSPRHKFLYTA-GSDGIISCWNLQTR  283 (342)
T ss_dssp             CCCTTCCSSCCCEEEEEECTTTCCEEEE-ETTSCEEEEETTTT
T ss_pred             eeccCCCcccccceeEEecCCccEEEEE-CCCCEEEEEECCCC
Confidence               1112356679999999999999998 89999999997654

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.8e-27  Score=205.04  Aligned_cols=255  Identities=20%  Similarity=0.401  Sum_probs=192.2

Q ss_pred             cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceE
Q psy17902        115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIL  194 (454)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~  194 (454)
                      ++.+..|-..    .......|.+  |.+.|++++|  ++++|++|+.||.|++|++..+........      .  ...
T Consensus        34 Dg~i~vWd~~----~~~~~~~l~~--H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~------~--~~~   97 (293)
T d1p22a2          34 DNTIKIWDKN----TLECKRILTG--HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH------H--CEA   97 (293)
T ss_dssp             SSCEEEEESS----SCCEEEEECC--CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC------C--CSC
T ss_pred             CCeEEEEECC----CCcEEEEEec--CCCCEeeeec--ccceeecccccccccccccccccccccccc------c--ccc
Confidence            3555555322    2335678888  9999999987  568999999999999999998876655442      2  223


Q ss_pred             EEEEeCCCcEEEEecCCCcEEEEeCCC----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902        195 ALAVANNNELVASGDNNSNIKLWSSSL----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       195 ~~~~~~~~~~l~~~~~dg~v~vw~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      ...+.+....++++..++.+.+|+...    .....+..|...|.++.+.  ...+++++.|+.|++||+.+++.+..+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~  175 (293)
T d1p22a2          98 VLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTSTCEFVRTLN  175 (293)
T ss_dssp             EEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             cccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCCCcEEEEEc
Confidence            344556677899999999999999832    2345567788899888776  4578899999999999999999999999


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      ++...|..+.++  +.++++++.||.|++||+++...+ ...++...+.. ...++.+|++++.||.|++||+.......
T Consensus       176 ~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~l~sg~~dg~i~iwd~~~~~~~~  252 (293)
T d1p22a2         176 GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC-IRFDNKRIVSGAYDGKIKVWDLVAALDPR  252 (293)
T ss_dssp             CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE-EECCSSEEEEEETTSCEEEEEHHHHTSTT
T ss_pred             ccccccccccCC--CCeEEEecCCCEEEEEecccceeeeeecccceeeee-ccccceEEEEEcCCCEEEEEECCCCcccc
Confidence            999999888775  578999999999999999998887 55566665554 45577899999999999999985433221


Q ss_pred             eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902        350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK  392 (454)
Q Consensus       350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd  392 (454)
                      .............|...|++++|+  +.+|++|+.||+|+|||
T Consensus       253 ~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD  293 (293)
T d1p22a2         253 APAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD  293 (293)
T ss_dssp             SCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred             ccCCceeeEEecCCCCCEEEEEEc--CCEEEEEecCCEEEEeC
Confidence            111100000112356669999884  56899999999999997

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.96  E-value=7.3e-27  Score=212.81  Aligned_cols=243  Identities=12%  Similarity=0.045  Sum_probs=188.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCC--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDG--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~  218 (454)
                      |...|.+++|+|||++|++++.+.  .|++||+.++......       .|...|.+++|+|++++|++++.++.+++|+
T Consensus        41 ~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~~-------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~  113 (360)
T d1k32a3          41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFE-------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVD  113 (360)
T ss_dssp             CCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEECC-------CCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEee-------CCCceEEeeeecccccccceecccccccccc
Confidence            999999999999999998877553  7999999987665433       4788999999999999999999999999999


Q ss_pred             C-CCccEEeecccCCCeEEEEEcCCCCEEEEEe----------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        219 S-SLEHLHTFTGHKAPITGLAISFECDTLYSSS----------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       219 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      + .+.....+..|...+.+++|+|+|++|+.++          .++.+++|++.+++.... ..+...+.++.|+|+|++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~-~~~~~~~~~~~~spdg~~  192 (360)
T d1k32a3         114 LETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKN  192 (360)
T ss_dssp             TTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC-SCSSSBEEEEEECTTSCE
T ss_pred             ccccceeeeeecccccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeee-cccccccccccccCCCCE
Confidence            9 6666777888999999999999999998654          355799999998876544 457788899999999999


Q ss_pred             EEEeeCCCcEEEeeccCCeEE--------EEccc------------------------------------cCCeEEEEec
Q psy17902        288 ISSGGTDKSVRVWKIQEESQL--------VFNGH------------------------------------SRGIDMTRRV  323 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~--------~~~~~------------------------------------~~~i~~~~~~  323 (454)
                      |++++.++.+.+|+.......        ....+                                    ......+...
T Consensus       193 l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (360)
T d1k32a3         193 LYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL  272 (360)
T ss_dssp             EEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC
T ss_pred             EEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeec
Confidence            999999999999986543221        01000                                    0011111111


Q ss_pred             CCC--------------EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEE
Q psy17902        324 NDQ--------------QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVK  389 (454)
Q Consensus       324 ~~~--------------~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~  389 (454)
                      ++.              ++++++.++.|++||+.+++.....             ..|.+++|+|||++|++++.||.|+
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-------------~~v~~~~~SpDG~~l~~~~~Dg~i~  339 (360)
T d1k32a3         273 ESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK-------------NNLTDLRLSADRKTVMVRKDDGKIY  339 (360)
T ss_dssp             SSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE-------------EEEEEEEECTTSCEEEEEETTSCEE
T ss_pred             CCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEEec-------------CCcCEEEECCCCCEEEEEECCCeEE
Confidence            111              2344556889999999876543221             2289999999999999999999999


Q ss_pred             EEEcCCCceeeEecc
Q psy17902        390 LWKITPKRTLEFLQD  404 (454)
Q Consensus       390 iwd~~~~~~~~~~~~  404 (454)
                      +||+..+.....+..
T Consensus       340 v~d~~~~~~~~~~~~  354 (360)
T d1k32a3         340 TFPLEKPEDERTVET  354 (360)
T ss_dssp             EEESSCTTSCEECCC
T ss_pred             EEECCCCCcceEEEe
Confidence            999999877766653

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=8e-26  Score=199.37  Aligned_cols=229  Identities=12%  Similarity=0.144  Sum_probs=178.9

Q ss_pred             eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902        136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK  215 (454)
Q Consensus       136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~  215 (454)
                      ..+  |...|.+++++++ ..+++++.|++|++|++....             ....+.++++++++..++++.. +.+.
T Consensus        42 ~~~--h~~~V~~~~~~~~-~~~~s~s~D~~v~~w~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-~~~~  104 (287)
T d1pgua2          42 HQD--HSNLIVSLDNSKA-QEYSSISWDDTLKVNGITKHE-------------FGSQPKVASANNDGFTAVLTND-DDLL  104 (287)
T ss_dssp             ECC--CCSCEEEEECCST-TCCEEEETTTEEEETTEEEEE-------------CSSCEEEEEECSSSEEEEEETT-SEEE
T ss_pred             CCC--CCCCEEEEEecCC-CeEEEEeeccccccccccccc-------------cccceeeeeeccCCceEEEeec-ccce
Confidence            355  9999999999976 568999999999999876421             2235778899999887777664 5677


Q ss_pred             EEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC-cEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEEee
Q psy17902        216 LWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR-SIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISSGG  292 (454)
Q Consensus       216 vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~  292 (454)
                      +|+. .+..+..+..+ ..+  .++++++..+++++.++ .|++|++........+. .|...+++++|+|++.+|++|+
T Consensus       105 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~  181 (287)
T d1pgua2         105 ILQSFTGDIIKSVRLN-SPG--SAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD  181 (287)
T ss_dssp             EEETTTCCEEEEEECS-SCE--EEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred             eeeccceeeeeecccc-cee--eeeeccCcceeeeccccceeeeeeccccceeeeeeeccCCceeEEEeccCcccccccc
Confidence            8887 56666665533 344  45667788888888775 79999998766555543 4788999999999999999999


Q ss_pred             CCCcEEEeeccCCeEE--EEccccCCeEEEEec-----------CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902        293 TDKSVRVWKIQEESQL--VFNGHSRGIDMTRRV-----------NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS  359 (454)
Q Consensus       293 ~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~-----------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~  359 (454)
                      .||.|++||+.++...  .+..|...+.++.+.           ++.+|++|+.|+.|++||+.+.........      
T Consensus       182 ~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~------  255 (287)
T d1pgua2         182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALN------  255 (287)
T ss_dssp             TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETT------
T ss_pred             ccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeC------
Confidence            9999999999998776  466888888888764           346899999999999999977543333222      


Q ss_pred             CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902        360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI  393 (454)
Q Consensus       360 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~  393 (454)
                        .|...|++++|+|++ .|++++.||+|++|++
T Consensus       256 --~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         256 --AHKDGVNNLLWETPS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             --SSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred             --CCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence              245669999999987 5888999999999996

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.95  E-value=1.2e-24  Score=192.83  Aligned_cols=263  Identities=10%  Similarity=0.109  Sum_probs=202.7

Q ss_pred             EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeC-CCccEEeecccCCCeE
Q psy17902        158 YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSS-SLEHLHTFTGHKAPIT  235 (454)
Q Consensus       158 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~  235 (454)
                      ++++.+++|.+||+.+++.+..++.       ...+..++|+|+|++|+ +++.++.|.+||+ ++..+..+..+. .+.
T Consensus         6 V~~~~~~~v~v~D~~t~~~~~~i~~-------g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~   77 (301)
T d1l0qa2           6 IANSESDNISVIDVTSNKVTATIPV-------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQ   77 (301)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEEC-------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred             EEECCCCEEEEEECCCCeEEEEEEC-------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccc
Confidence            4567889999999999988877753       23578999999999874 6677899999999 677777777665 568


Q ss_pred             EEEEcCCCCEEEE-EeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE-EeeCCCcEEEeeccCCeEEEEccc
Q psy17902        236 GLAISFECDTLYS-SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS-SGGTDKSVRVWKIQEESQLVFNGH  313 (454)
Q Consensus       236 ~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~  313 (454)
                      .++|++++..+++ +..++.+.+|+..+++....+.. ...+.++.++|++..++ ++..++.+.+|+..+........+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (301)
T d1l0qa2          78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV  156 (301)
T ss_dssp             EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             ccccccccccccccccccceeeecccccceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc
Confidence            8999999986665 45677899999999998887764 45678899999998764 555688899999999888744444


Q ss_pred             cCCeE-EEEecCCCEEEEEeCC-CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec---CCCcE
Q psy17902        314 SRGID-MTRRVNDQQFITCGED-GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS---YDGCV  388 (454)
Q Consensus       314 ~~~i~-~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~v  388 (454)
                      ..... ....+++..+++++.+ +.+.+|+.............          ..+..++|++++..+++++   .++.|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~g~~~~v~~~~~~~~~v  226 (301)
T d1l0qa2         157 GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE----------AAPSGIAVNPEGTKAYVTNVDKYFNTV  226 (301)
T ss_dssp             CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS----------SEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred             CCCceEEEeeccccceeeecccccccccccccceeeeeccccc----------CCcceeeccccccccccccccceeeee
Confidence            44444 4445566777766654 66777887776666655432          2278899999999776654   34689


Q ss_pred             EEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        389 KLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       389 ~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ++||+.+++.+..+.   ....+.+++|+|||++|+++++.++.|.+||..++.
T Consensus       227 ~v~D~~t~~~~~~~~---~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~  277 (301)
T d1l0qa2         227 SMIDTGTNKITARIP---VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT  277 (301)
T ss_dssp             EEEETTTTEEEEEEE---CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred             eeeecCCCeEEEEEc---CCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe
Confidence            999999998887776   345688999999999987776889999999987763

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=2.3e-25  Score=207.87  Aligned_cols=282  Identities=5%  Similarity=-0.050  Sum_probs=191.1

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE-----ee
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLH-----TF  227 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~-----~~  227 (454)
                      +-++++.+.||.|+|||+.+++.+..+..      + ..+..++|+|||++|++++.|+.|++||+ +++...     ..
T Consensus        32 ~~~~V~~~~dg~v~vwD~~t~~~~~~l~~------g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~  104 (426)
T d1hzua2          32 NLFSVTLRDAGQIALVDGDSKKIVKVIDT------G-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG  104 (426)
T ss_dssp             GEEEEEETTTTEEEEEETTTCSEEEEEEC------C-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred             eEEEEEEcCCCEEEEEECCCCcEEEEEeC------C-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCC
Confidence            33567788899999999999999888763      3 36899999999999999999999999999 444322     22


Q ss_pred             cccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC-EEEEeeCCCc---------
Q psy17902        228 TGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR-VISSGGTDKS---------  296 (454)
Q Consensus       228 ~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~---------  296 (454)
                      .+|.+.+.+++|+|||++|+++ ..++.+.+||..++..+..+..|...+..+.+.+++. ..++++.|+.         
T Consensus       105 ~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~  184 (426)
T d1hzua2         105 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET  184 (426)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred             CCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCC
Confidence            3566777788889999987555 5789999999999988887776665554444444443 2223333333         


Q ss_pred             --EEEeeccCCeE--EEEccccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecCCCccceeeecccCCC------------
Q psy17902        297 --VRVWKIQEESQ--LVFNGHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGYD------------  358 (454)
Q Consensus       297 --i~i~d~~~~~~--~~~~~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~------------  358 (454)
                        +.+++......  .....+...+..+. .+++.+++++. .+..+.+|+..++..+..........            
T Consensus       185 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (426)
T d1hzua2         185 GKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY  264 (426)
T ss_dssp             TEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTT
T ss_pred             CeEEEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCC
Confidence              33333333221  12233334443333 44566665555 55667888877665544332110000            


Q ss_pred             ---------------------------------CCCCCCCcEEEEEEecCCCEEEE-------ecCCCcEEEEEcCCCce
Q psy17902        359 ---------------------------------SSSSEPNWITSVACLHNSDLVAS-------GSYDGCVKLWKITPKRT  398 (454)
Q Consensus       359 ---------------------------------~~~~~~~~i~~~~~s~~~~~l~~-------~~~dg~v~iwd~~~~~~  398 (454)
                                                       ....|...+..++|+|++++|++       ++.+++|+|||+.+++.
T Consensus       265 ~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~  344 (426)
T d1hzua2         265 GPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDA  344 (426)
T ss_dssp             EEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred             CceEEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCc
Confidence                                             01134566888999999999995       55688999999999876


Q ss_pred             eeEecc-------CCCceeeeEEEEcCCCCEEEEEe----cCCCceeeeeeeCCC
Q psy17902        399 LEFLQD-------IPLSGVINSLVFTSDHKHLVAGI----GTEHRFGRWKTIKGV  442 (454)
Q Consensus       399 ~~~~~~-------~~~~~~v~~l~~s~d~~~l~~~~----~~d~~i~~W~~~~~~  442 (454)
                      ...+..       ..+...|.+++|||||++|++++    +.++.|++||..+..
T Consensus       345 ~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k  399 (426)
T d1hzua2         345 KYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK  399 (426)
T ss_dssp             CCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE
T ss_pred             CeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe
Confidence            654421       12556699999999999886543    368889999976653

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.94  E-value=2.3e-24  Score=194.13  Aligned_cols=268  Identities=10%  Similarity=0.027  Sum_probs=199.1

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecccC-
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTGHK-  231 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~~~-  231 (454)
                      +||++++.|++|.+||+.+.+.+..++..    .+...+.+++|+|||++| ++++.++.|.+||+ +++.+..+..+. 
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~----~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~   77 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP   77 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECC----CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCC
Confidence            58999999999999999999888766531    233457789999999987 56678899999999 667777665543 


Q ss_pred             ----CCeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC
Q psy17902        232 ----APITGLAISFECDTLYSSS------------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK  295 (454)
Q Consensus       232 ----~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg  295 (454)
                          ..+..++|+|++++++++.            .++.+.+||..++.....+. +...+.+++|+|+++++++++.  
T Consensus        78 ~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~--  154 (337)
T d1pbyb_          78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGR--  154 (337)
T ss_dssp             TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESS--
T ss_pred             cccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcC--
Confidence                3455789999999998876            46788999999999888776 4556889999999999998764  


Q ss_pred             cEEEeeccCCeEEE-EccccCCeEEEEe------------------------cCCCEEEEEeCCCCEEEEecCCCcccee
Q psy17902        296 SVRVWKIQEESQLV-FNGHSRGIDMTRR------------------------VNDQQFITCGEDGTLSLWSILKKVPTHT  350 (454)
Q Consensus       296 ~i~i~d~~~~~~~~-~~~~~~~i~~~~~------------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~  350 (454)
                      .+.+||..++.... ...+.........                        .....+..++.++.+.+|++.++.....
T Consensus       155 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (337)
T d1pbyb_         155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR  234 (337)
T ss_dssp             SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred             CcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEE
Confidence            47889998887662 2221111000000                        0111112223345688899888765544


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE  430 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d  430 (454)
                      ....        +...+..+.++|++.+++++  ++.|++||+.+++.+..+.   +...+.+++|+|||++|+++ +.+
T Consensus       235 ~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~s~dG~~l~v~-~~~  300 (337)
T d1pbyb_         235 EVRI--------MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP---LPHSYYSVNVSTDGSTVWLG-GAL  300 (337)
T ss_dssp             EEEE--------CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE---CSSCCCEEEECTTSCEEEEE-SBS
T ss_pred             EecC--------CCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEEE-eCC
Confidence            3322        23348889999999988776  4789999999998888876   45678999999999999998 889


Q ss_pred             CceeeeeeeCCCe
Q psy17902        431 HRFGRWKTIKGVK  443 (454)
Q Consensus       431 ~~i~~W~~~~~~~  443 (454)
                      +.|.+||..+...
T Consensus       301 ~~i~v~D~~t~~~  313 (337)
T d1pbyb_         301 GDLAAYDAETLEK  313 (337)
T ss_dssp             SEEEEEETTTCCE
T ss_pred             CcEEEEECCCCcE
Confidence            9999999976543

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.92  E-value=3.4e-24  Score=193.72  Aligned_cols=281  Identities=8%  Similarity=-0.001  Sum_probs=198.5

Q ss_pred             EEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEE
Q psy17902        148 IAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLH  225 (454)
Q Consensus       148 ~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~  225 (454)
                      ++|++++++|++++.++.|.+||+.+++.+..+..     .+...+.+++|+|||+++ +++..++.|.+||+ +++.+.
T Consensus         2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~-----~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~   76 (346)
T d1jmxb_           2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF   76 (346)
T ss_dssp             CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred             ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEc-----CCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeee
Confidence            47899999999999999999999999988876653     345567899999999987 55567899999999 555555


Q ss_pred             eeccc------CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCceeEEEeec--cCCceeEEEeecCC
Q psy17902        226 TFTGH------KAPITGLAISFECDTLYSSS------------NDRSIKVWNIEDRAYVETLFG--HQSAITSLDILAKN  285 (454)
Q Consensus       226 ~~~~~------~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~~~~~  285 (454)
                      .+...      ...+..++|+|||+++++++            .++.+.+|+..+++....+..  ....+..+.+++++
T Consensus        77 ~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (346)
T d1jmxb_          77 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG  156 (346)
T ss_dssp             EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred             eecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCC
Confidence            55432      23456799999999988775            467789999888765544332  23446667777777


Q ss_pred             CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec--------------------------CCCEEEEEeCCCCEE
Q psy17902        286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV--------------------------NDQQFITCGEDGTLS  338 (454)
Q Consensus       286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~--------------------------~~~~l~~~~~dg~i~  338 (454)
                      .+++++   +.+.+|++.++... .+..+.........+                          ....+.++..++.+.
T Consensus       157 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (346)
T d1jmxb_         157 SLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL  233 (346)
T ss_dssp             CEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred             EEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEE
Confidence            666543   46899999887766 222221111000111                          112233444566788


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                      +|++.++.........+        ...+..+.+++++.+++.+.. +.|.+||+.+++.+..+.   +...+.+++|||
T Consensus       234 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~---~~~~~~~va~s~  301 (346)
T d1jmxb_         234 SVDLKTGKTHTQEFADL--------TELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN---LDHTYYCVAFDK  301 (346)
T ss_dssp             EEETTTCCEEEEEEEEC--------SSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE---CSSCCCEEEECS
T ss_pred             EEECCCCceEEEEeecc--------cceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc---CCCCEEEEEEcC
Confidence            88888776655543322        333888999998888777664 579999999998887776   345699999999


Q ss_pred             CCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902        419 DHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI  451 (454)
Q Consensus       419 d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~  451 (454)
                      ||++|+++ +.|+.|.+||..+.  ..+..+++
T Consensus       302 DG~~l~v~-~~d~~v~v~D~~t~--~~i~~i~~  331 (346)
T d1jmxb_         302 KGDKLYLG-GTFNDLAVFNPDTL--EKVKNIKL  331 (346)
T ss_dssp             SSSCEEEE-SBSSEEEEEETTTT--EEEEEEEC
T ss_pred             CCCEEEEE-eCCCcEEEEECccC--CEEEEEEC
Confidence            99999999 78999999999765  44444443

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.92  E-value=7.3e-23  Score=190.47  Aligned_cols=284  Identities=7%  Similarity=-0.097  Sum_probs=193.1

Q ss_pred             cCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCcc--EEe-
Q psy17902        151 TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEH--LHT-  226 (454)
Q Consensus       151 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~--~~~-  226 (454)
                      ++..-++++.+.+|.|.|||..+++.+..+..      + ..+..++|+|||++|++++.||.|.+||+ +++.  +.. 
T Consensus        29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~~------g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i  101 (432)
T d1qksa2          29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDT------G-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI  101 (432)
T ss_dssp             CGGGEEEEEETTTTEEEEEETTTCCEEEEEEC------S-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE
T ss_pred             CCCcEEEEEEcCCCEEEEEECCCCcEEEEEeC------C-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEE
Confidence            34434468889999999999999999988763      3 36899999999999999999999999998 3332  222 


Q ss_pred             --ecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeecc-----------CCceeEEEeecCCCEE-EEe
Q psy17902        227 --FTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGH-----------QSAITSLDILAKNRVI-SSG  291 (454)
Q Consensus       227 --~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l-~~~  291 (454)
                        ...|.+.+.+..|+|||++| ++++.++.|++||..+++.+..+..|           ......+.++|++..+ ++.
T Consensus       102 ~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~  181 (432)
T d1qksa2         102 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV  181 (432)
T ss_dssp             ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred             ecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEE
Confidence              33566677777888999986 67788999999999999988776543           3445678889998765 556


Q ss_pred             eCCCcEEEeeccCCeEE--EEccccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecCCCccceeeecccCC----------
Q psy17902        292 GTDKSVRVWKIQEESQL--VFNGHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGY----------  357 (454)
Q Consensus       292 ~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~----------  357 (454)
                      ..++.|.+|+..+.+..  ....+......+. .+++.++++++ .++.+.++|..+...+..+......          
T Consensus       182 ~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~  261 (432)
T d1qksa2         182 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFV  261 (432)
T ss_dssp             TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEE
T ss_pred             ccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCccccee
Confidence            67899999999887654  2223334444444 45567666666 4567888888776554443311100          


Q ss_pred             -------------------------CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc---------------
Q psy17902        358 -------------------------DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR---------------  397 (454)
Q Consensus       358 -------------------------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~---------------  397 (454)
                                               .....+...+....++|++..+++++.++++++|...+..               
T Consensus       262 ~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~  341 (432)
T d1qksa2         262 HPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK  341 (432)
T ss_dssp             ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGG
T ss_pred             cCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEech
Confidence                                     0011222345666666666666666666666666543211               


Q ss_pred             ---------eeeEe------ccCCCceeeeEEEEcCCCCEEEEEec----CCCceeeeeeeCC
Q psy17902        398 ---------TLEFL------QDIPLSGVINSLVFTSDHKHLVAGIG----TEHRFGRWKTIKG  441 (454)
Q Consensus       398 ---------~~~~~------~~~~~~~~v~~l~~s~d~~~l~~~~~----~d~~i~~W~~~~~  441 (454)
                               .+..+      ....+...|.+++|||||++|+++..    .++.|.+||..+.
T Consensus       342 ~la~~s~d~~~k~w~~~~~~~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~  404 (432)
T d1qksa2         342 AMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL  404 (432)
T ss_dssp             GCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred             hhcccccCCceEecccccccccCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCc
Confidence                     00000      00125567889999999999976642    4688999987655

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.91  E-value=1.2e-21  Score=173.25  Aligned_cols=243  Identities=14%  Similarity=0.128  Sum_probs=185.6

Q ss_pred             CCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCC
Q psy17902        143 ASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSS  220 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~  220 (454)
                      ..+..++|+|+|++|+ +++.++.|.+||+.++..+..+..      + ..+..++|++++.+++ ++..++.+.+|+..
T Consensus        32 ~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (301)
T d1l0qa2          32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA------G-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTT  104 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC------S-SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeec------c-ccccccccccccccccccccccceeeecccc
Confidence            4578999999999875 566789999999999888776652      2 3578899999998655 45567899999994


Q ss_pred             -CccEEeecccCCCeEEEEEcCCCCEEEE-EeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC-CcE
Q psy17902        221 -LEHLHTFTGHKAPITGLAISFECDTLYS-SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD-KSV  297 (454)
Q Consensus       221 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i  297 (454)
                       +.....+. +...+.+++|+|++..++. +..++.+.+|+..+...+..+..+ ..+..+.++|++..+++++.+ +.+
T Consensus       105 ~~~~~~~~~-~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  182 (301)
T d1l0qa2         105 SNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSI  182 (301)
T ss_dssp             TTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred             cceeeeecc-ccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC-CCceEEEeeccccceeeeccccccc
Confidence             44455554 4567788999999988765 455788999999999988877644 457889999999888777665 567


Q ss_pred             EEeeccCCeEEE-EccccCCeEEEEecCCCEEEEEe---CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        298 RVWKIQEESQLV-FNGHSRGIDMTRRVNDQQFITCG---EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       298 ~i~d~~~~~~~~-~~~~~~~i~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      .+|+........ ...+..+....+.+++..+++++   .++.|.+||+.+++.+..+...          ..+.+++|+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~----------~~~~~va~s  252 (301)
T d1l0qa2         183 SVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG----------PDPAGIAVT  252 (301)
T ss_dssp             EEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC----------SSEEEEEEC
T ss_pred             ccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC----------CCEEEEEEe
Confidence            777777766653 33334444555666777766554   3468999999999888877642          228999999


Q ss_pred             cCCCEE-EEecCCCcEEEEEcCCCceeeEecc
Q psy17902        374 HNSDLV-ASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       374 ~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      |+|++| ++++.+++|++||+.+++.+..+..
T Consensus       253 pdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v  284 (301)
T d1l0qa2         253 PDGKKVYVALSFCNTVSVIDTATNTITATMAV  284 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             CCCCEEEEEECCCCeEEEEECCCCeEEEEEeC
Confidence            999976 5777899999999999988887753

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.7e-22  Score=188.26  Aligned_cols=295  Identities=9%  Similarity=0.067  Sum_probs=190.0

Q ss_pred             hcCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce
Q psy17902        114 QEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI  193 (454)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v  193 (454)
                      .++.+..+-...    ...+.++..  |. .+..++|||||++|++++.||.|++||+.+++....... .....|...+
T Consensus        40 ~dg~v~vwD~~t----~~~~~~l~~--g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i-~~~~~~~~~~  111 (426)
T d1hzua2          40 DAGQIALVDGDS----KKIVKVIDT--GY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-KIGIEARSVE  111 (426)
T ss_dssp             TTTEEEEEETTT----CSEEEEEEC--CS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-ECCSEEEEEE
T ss_pred             CCCEEEEEECCC----CcEEEEEeC--CC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEE-eCCCCCcceE
Confidence            355665553321    224556666  64 589999999999999999999999999998875432221 1112355566


Q ss_pred             EEEEEeCCCcEEEEe-cCCCcEEEEeC-CCccEEeecccCCC-----------eEEEEEcCCCCEEEEEeC-CCcEEEEe
Q psy17902        194 LALAVANNNELVASG-DNNSNIKLWSS-SLEHLHTFTGHKAP-----------ITGLAISFECDTLYSSSN-DRSIKVWN  259 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~-~~dg~v~vw~~-~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~-dg~i~iwd  259 (454)
                      .+++|+|||++|+++ ..++.+.+||. .+..+..+..|...           ...+.+++++..++.... .+.+.+++
T Consensus       112 ~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~  191 (426)
T d1hzua2         112 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN  191 (426)
T ss_dssp             ECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred             EeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEE
Confidence            777888999987555 47899999999 55555555544433           345555666655554433 34455555


Q ss_pred             CCCcee-EEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEE-----------------------------
Q psy17902        260 IEDRAY-VETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQL-----------------------------  308 (454)
Q Consensus       260 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-----------------------------  308 (454)
                      ...... ......+...+..+.|+|++++++++. .+..+.+++..++...                             
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (426)
T d1hzua2         192 YKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS  271 (426)
T ss_dssp             CSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEE
T ss_pred             eccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEec
Confidence            544432 223345777888999999998777665 3445667766544332                             


Q ss_pred             --------------------------EEccccCCeEEEEec-CCCEEEE-------EeCCCCEEEEecCCCccceeeecc
Q psy17902        309 --------------------------VFNGHSRGIDMTRRV-NDQQFIT-------CGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       309 --------------------------~~~~~~~~i~~~~~~-~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                                                .+.+|...+..+.++ ++.+|++       ++.+++|+|||+.+++...++...
T Consensus       272 ~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~  351 (426)
T d1hzua2         272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPI  351 (426)
T ss_dssp             CTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECH
T ss_pred             cCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEecc
Confidence                                      222333444444444 4556663       345789999999998877665432


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEE-----ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVAS-----GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV  424 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~-----~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~  424 (454)
                      ........+...+..++|||||++|+.     ++.+|.|+|||..+.+....+....        .++|+|+|-+
T Consensus       352 ~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~--------~~tp~Gk~~~  418 (426)
T d1hzua2         352 AEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR--------LITPTGKFNV  418 (426)
T ss_dssp             HHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT--------CCSEEEEEEH
T ss_pred             chhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC--------ccCCCceEeE
Confidence            211112224555999999999996643     2468889999999999888887632        3467776643

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.89  E-value=5.6e-20  Score=167.83  Aligned_cols=288  Identities=10%  Similarity=-0.056  Sum_probs=201.4

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-----KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------  209 (454)
                      |.+++.+++++|+|+.+++..     ..+.|.+||..+++.+..+..      +.  ...++|+|||++|++++      
T Consensus        19 ~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~------~~--~~~~a~SpDG~~l~va~~~~~~~   90 (373)
T d2madh_          19 ADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG------GF--LPNPVAAHSGSEFALASTSFSRI   90 (373)
T ss_pred             CCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeC------CC--CccEEEcCCCCEEEEEeecCCcc
Confidence            889999999999999987652     346799999999988876652      22  23689999999998875      


Q ss_pred             ----CCCcEEEEeC-CCccEEeecccCCCe-------EEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCc
Q psy17902        210 ----NNSNIKLWSS-SLEHLHTFTGHKAPI-------TGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSA  275 (454)
Q Consensus       210 ----~dg~v~vw~~-~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~  275 (454)
                          .++.|.+||. +++.+..+..+....       ..+.|+++++.++...  .++.+.+|+....+....    ...
T Consensus        91 ~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~  166 (373)
T d2madh_          91 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQL----LSS  166 (373)
T ss_pred             cccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEE----ecc
Confidence                3578999999 666666665554433       4578888888766554  456788999887765433    334


Q ss_pred             eeEEEeecCCCE-EEEeeCCCcEEEeeccCCeEEEE-cc------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902        276 ITSLDILAKNRV-ISSGGTDKSVRVWKIQEESQLVF-NG------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP  347 (454)
Q Consensus       276 v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~-~~------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~  347 (454)
                      ..++.++|+++. +++.+.|+.+.+|+......... ..      .........+..+..++..+.++.+.+|+......
T Consensus       167 ~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  246 (373)
T d2madh_         167 PTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA  246 (373)
T ss_pred             ceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeE
Confidence            578889999864 56788999999999988776622 11      11112333445566777888899999999887654


Q ss_pred             ceeeecccCCCC---CCCCCCcEEEEEEecCCCE----------EEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902        348 THTIPVAHGYDS---SSSEPNWITSVACLHNSDL----------VASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       348 ~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~----------l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l  414 (454)
                      ............   ....+.....+++++++..          +++...++.|.+||..+++.+..+.   +...+.++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~---~~~~~~~~  323 (373)
T d2madh_         247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAI  323 (373)
T ss_pred             EEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec---CCCCeeEE
Confidence            333221110000   0001122344566666554          3455667789999999998888775   56678999


Q ss_pred             EEcCCCCEE-EEEecCCCceeeeeeeCCCe
Q psy17902        415 VFTSDHKHL-VAGIGTEHRFGRWKTIKGVK  443 (454)
Q Consensus       415 ~~s~d~~~l-~~~~~~d~~i~~W~~~~~~~  443 (454)
                      +|+|||+.+ +++.+.|+.|++||..++..
T Consensus       324 a~spDG~~~l~vt~~~d~~v~v~D~~tg~~  353 (373)
T d2madh_         324 SVAQDGGPDLYALSAGTEVLHIYDAGAGDQ  353 (373)
T ss_pred             EECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence            999999864 45558899999999987754

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.6e-20  Score=167.05  Aligned_cols=281  Identities=10%  Similarity=0.134  Sum_probs=184.3

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCC-CccEE---eeccc
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSS-LEHLH---TFTGH  230 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~-~~~~~---~~~~~  230 (454)
                      .+++++.|++|++|++.....+..+...    .+...+..|+|+|||++|++++ .++.|++|++. .....   ....+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~----~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~   81 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVV----DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL   81 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEE----ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEE----cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeeccc
Confidence            4567778999999999765433222111    3566899999999999986554 58999999983 22222   22334


Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEE--EeeccCCceeEEEeecCCCEEEEeeC-CCcEEEeeccCCe
Q psy17902        231 KAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVE--TLFGHQSAITSLDILAKNRVISSGGT-DKSVRVWKIQEES  306 (454)
Q Consensus       231 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~  306 (454)
                      ...+..++|+|+|++|++++. ++.|.+|+........  ....+...+.++.++|+++++++++. +..|.+|+.....
T Consensus        82 ~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~  161 (333)
T d1ri6a_          82 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG  161 (333)
T ss_dssp             SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred             CCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCC
Confidence            556788999999999999885 6689999887665433  33456777889999999998777664 4578999987654


Q ss_pred             EEE-------EccccCCeEEEEec-CCCEEEEE-eCCCCEEEEecCCCccceee-ecccCCCCCCCCCCcEEEEEEecCC
Q psy17902        307 QLV-------FNGHSRGIDMTRRV-NDQQFITC-GEDGTLSLWSILKKVPTHTI-PVAHGYDSSSSEPNWITSVACLHNS  376 (454)
Q Consensus       307 ~~~-------~~~~~~~i~~~~~~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~  376 (454)
                      ...       ..........+.+. ++..++.. ...+...+|+.......... ..................+++++++
T Consensus       162 ~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~  241 (333)
T d1ri6a_         162 HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG  241 (333)
T ss_dssp             CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS
T ss_pred             cceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEeccc
Confidence            331       11122223444444 45555444 35667788876543222111 1111111111234457889999999


Q ss_pred             CEEEE-ecCCCcEEEEEcCCCceeeEec-cCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902        377 DLVAS-GSYDGCVKLWKITPKRTLEFLQ-DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK  440 (454)
Q Consensus       377 ~~l~~-~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~  440 (454)
                      +++++ +..++.+.+|++........+. .......+.+++|+|||++|+++++.++.|.+|+...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~  307 (333)
T d1ri6a_         242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG  307 (333)
T ss_dssp             SEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred             CceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEEC
Confidence            86554 5567899999987664333322 2224456788999999999999867789999997654

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.89  E-value=1.4e-21  Score=175.56  Aligned_cols=255  Identities=12%  Similarity=0.066  Sum_probs=179.6

Q ss_pred             EeEeccCCCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec--
Q psy17902        133 CTKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD--  209 (454)
Q Consensus       133 ~~~~~~~~h~~~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--  209 (454)
                      ...+....+...+.+++|+|||++|+ +++.++.|.+||+.+++.+..+..... ..+...+..++|+|++++++++.  
T Consensus        24 ~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~-~~~~~~~~~v~~s~dg~~l~~~~~~  102 (337)
T d1pbyb_          24 DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-EERVKSLFGAALSPDGKTLAIYESP  102 (337)
T ss_dssp             EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-TEEEECTTCEEECTTSSEEEEEEEE
T ss_pred             EEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCC-cccccceeeEEEcCCCcEEEEeecC
Confidence            44444322556688999999999875 567789999999999888766543211 11223456799999999998875  


Q ss_pred             ----------CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeE
Q psy17902        210 ----------NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITS  278 (454)
Q Consensus       210 ----------~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~  278 (454)
                                .++.+.+||. .......+. +...+.+++|+|+++++++++.  .+.+||..+++....+..+... ..
T Consensus       103 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~-~~  178 (337)
T d1pbyb_         103 VRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWE-AE  178 (337)
T ss_dssp             EEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTT-TT
T ss_pred             CcceeeeccccccceeeccccCCeEEEecc-ccCCceEEEEcCCCCEEEEEcC--CcceeeeecCcEEEEeecCCcc-cc
Confidence                      3567889999 444444544 5567889999999999999864  4788999998887766433211 11


Q ss_pred             EEeecC------------------------CCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecCC-CEEEEE
Q psy17902        279 LDILAK------------------------NRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVND-QQFITC  331 (454)
Q Consensus       279 ~~~~~~------------------------~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~~-~~l~~~  331 (454)
                      ..+.|+                        ...+..+..++.+.+|++.++...  .+..+........+.+. .+++.+
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (337)
T d1pbyb_         179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA  258 (337)
T ss_dssp             TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred             ceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc
Confidence            111111                        111122334556889999887765  34445555555555544 444433


Q ss_pred             eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        332 GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                        ++.|++||+.+++.+..+...+          .+.+++|+|+|++|++++.+|+|++||..+++.+..+..
T Consensus       259 --~~~i~v~d~~~~~~~~~~~~~~----------~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~  319 (337)
T d1pbyb_         259 --YNVLESFDLEKNASIKRVPLPH----------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL  319 (337)
T ss_dssp             --ESEEEEEETTTTEEEEEEECSS----------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred             --cccEEEEECCCCcEEEEEcCCC----------CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence              5889999999999998876432          278999999999999999999999999999988888764

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.88  E-value=1.7e-21  Score=181.19  Aligned_cols=269  Identities=8%  Similarity=0.040  Sum_probs=177.4

Q ss_pred             eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecC
Q psy17902        132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDN  210 (454)
Q Consensus       132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~  210 (454)
                      .+..+..  |. .+..++|||||++|++++.||.|.+||+.+++....... .....|...+.+.+|+|||++| ++++.
T Consensus        54 v~~~~~~--g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i-~~~~~~~~~~~s~~~SpDG~~l~vs~~~  129 (432)
T d1qksa2          54 IKTVLDT--GY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-KIGSEARSIETSKMEGWEDKYAIAGAYW  129 (432)
T ss_dssp             EEEEEEC--SS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE-ECCSEEEEEEECCSTTCTTTEEEEEEEE
T ss_pred             EEEEEeC--CC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEE-ecCCCCCCeEEecccCCCCCEEEEEcCC
Confidence            4555655  53 599999999999999999999999999987653322111 1111344456666778899976 67778


Q ss_pred             CCcEEEEeC-CCccEEeecc-----------cCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCceeEEEee-ccCCce
Q psy17902        211 NSNIKLWSS-SLEHLHTFTG-----------HKAPITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYVETLF-GHQSAI  276 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v  276 (454)
                      ++.|++||. +++.+..+..           +......+.++|++..++ +...++.|.+||..+.+...... .+...+
T Consensus       130 ~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~  209 (432)
T d1qksa2         130 PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFL  209 (432)
T ss_dssp             TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSE
T ss_pred             CCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCcc
Confidence            999999999 6666665543           345567889999988765 55667999999998876543322 456678


Q ss_pred             eEEEeecCCCEEEEeeC-CCcEEEeeccCCeEEEEcc--------------------------c----------------
Q psy17902        277 TSLDILAKNRVISSGGT-DKSVRVWKIQEESQLVFNG--------------------------H----------------  313 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~--------------------------~----------------  313 (454)
                      .++.|+|+|+++++++. ++.+.++|..+........                          +                
T Consensus       210 ~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~  289 (432)
T d1qksa2         210 HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH  289 (432)
T ss_dssp             EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred             ccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccc
Confidence            99999999998776665 5578888887655541110                          0                


Q ss_pred             ---cCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCcc-------ceeeecccCC----------------CCCCCCCCc
Q psy17902        314 ---SRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVP-------THTIPVAHGY----------------DSSSSEPNW  366 (454)
Q Consensus       314 ---~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~~----------------~~~~~~~~~  366 (454)
                         ...+ ..+..+.+..+++++.+...++|+.....+       +.........                .....+...
T Consensus       290 ~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~~~~l~~~~~~  369 (432)
T d1qksa2         290 PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPR  369 (432)
T ss_dssp             TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCE
T ss_pred             cccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCeeeEEEEEechhhcccccCCceEecccccccccCCCCCc
Confidence               0001 111222344566666777777776543221       1100000000                001124556


Q ss_pred             EEEEEEecCCCEEEEec-----CCCcEEEEEcCCCceeeEecc
Q psy17902        367 ITSVACLHNSDLVASGS-----YDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~~-----~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      +.+++|||||++|+.+.     .+|.|.|||..+.+....+..
T Consensus       370 v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~~  412 (432)
T d1qksa2         370 VVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD  412 (432)
T ss_dssp             EEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred             EEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEEeEecC
Confidence            88999999999775553     468899999999988888775

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.84  E-value=2.1e-20  Score=168.47  Aligned_cols=249  Identities=9%  Similarity=-0.001  Sum_probs=173.2

Q ss_pred             CCCCeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------
Q psy17902        141 HRASITCIAVTSDSKHVYS-ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------  209 (454)
                      |...+.+++|+|||++|++ ++.++.|.+||+.+++....+........+...+..++|+|||+++++++          
T Consensus        38 ~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~  117 (346)
T d1jmxb_          38 DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY  117 (346)
T ss_dssp             SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred             CCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeee
Confidence            5667899999999998754 55789999999999887765543322222333566899999999988775          


Q ss_pred             --CCCcEEEEeC-CCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902        210 --NNSNIKLWSS-SLEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK  284 (454)
Q Consensus       210 --~dg~v~vw~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~  284 (454)
                        .++.+.+|+. .+.....+..  ....+..+.+++++..++++   +.+.+|++.+++.+..+..+. .+..+.++|+
T Consensus       118 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  193 (346)
T d1jmxb_         118 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRN-WNRKGYSAPD  193 (346)
T ss_dssp             EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTT-CCCTTBCCCB
T ss_pred             ccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCC-CccceEEecc
Confidence              3677888887 4443333322  23455667777777655543   568999999988877765432 2233334443


Q ss_pred             CC--------------------------EEEEeeCCCcEEEeeccCCeEE--EEccccCCeEE-EEecCCCEEEEEeCCC
Q psy17902        285 NR--------------------------VISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDM-TRRVNDQQFITCGEDG  335 (454)
Q Consensus       285 ~~--------------------------~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~-~~~~~~~~l~~~~~dg  335 (454)
                      +.                          .++++..++.+.+|++.++...  ....+...+.. ..++++..++... ++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  272 (346)
T d1jmxb_         194 VLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LN  272 (346)
T ss_dssp             CCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ES
T ss_pred             ccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CC
Confidence            32                          2333444566788888877655  33445555544 4445566665544 46


Q ss_pred             CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      .|.+||+.+++.+..+...+          .+.+++|+|||++|++++.||.|++||+.+++.+..+..
T Consensus       273 ~v~v~d~~~~~~~~~~~~~~----------~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~  331 (346)
T d1jmxb_         273 RLAKYDLKQRKLIKAANLDH----------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL  331 (346)
T ss_dssp             EEEEEETTTTEEEEEEECSS----------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEECCCCcEEEEEcCCC----------CEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEEC
Confidence            79999999999888876433          288999999999999999999999999999999988875

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.81  E-value=2.5e-18  Score=155.51  Aligned_cols=282  Identities=12%  Similarity=0.011  Sum_probs=184.2

Q ss_pred             EEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------C
Q psy17902        146 TCIAVTSDSKHVYSAC-----KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------N  210 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~  210 (454)
                      .-.+.+||++.+++..     .++.|.+||..+++.+..+..      +  .+..++|+|||++|++.+          .
T Consensus         5 ~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~------g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~   76 (355)
T d2bbkh_           5 ILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------G--FLPNPVVADDGSFIAHASTVFSRIARGER   76 (355)
T ss_dssp             BCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------C--SSCEEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred             EeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEEC------C--CCCceEEcCCCCEEEEEeCCCccccccCC
Confidence            3345689999988764     356799999999988776542      2  333699999999887643          4


Q ss_pred             CCcEEEEeC-CCccEEeecccC-------CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCc-----
Q psy17902        211 NSNIKLWSS-SLEHLHTFTGHK-------APITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSA-----  275 (454)
Q Consensus       211 dg~v~vw~~-~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~-----  275 (454)
                      ++.|.+||+ +++.+..+..+.       .....++|+++++++++++  .+..+.+|+..+++.+..+..+...     
T Consensus        77 d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (355)
T d2bbkh_          77 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPT  156 (355)
T ss_dssp             EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEE
T ss_pred             CCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeec
Confidence            689999999 566555554322       2335689999999888775  4568999999999888777544322     


Q ss_pred             --eeEEEeecCCCEEEEe-eCCCcEEEeeccCCeEEEEccccCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902        276 --ITSLDILAKNRVISSG-GTDKSVRVWKIQEESQLVFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI  351 (454)
Q Consensus       276 --v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  351 (454)
                        ...+.+++++..++.. ..++.+.+++......    .+...+ ......++..++.++.++.+++|++..+......
T Consensus       157 ~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~  232 (355)
T d2bbkh_         157 APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP  232 (355)
T ss_dssp             ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC----TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECC
T ss_pred             CCcceEEEcCCCCEEEEEecCCCeEEEEecccccc----eecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEe
Confidence              2234455555443332 2233344443332211    111112 2344557778889999999999999876532211


Q ss_pred             --ecccCC-CCCCCCCCcEEEEEEecCCCEEEEecCC----------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902        352 --PVAHGY-DSSSSEPNWITSVACLHNSDLVASGSYD----------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS  418 (454)
Q Consensus       352 --~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~  418 (454)
                        ...... ......+.....+++++++..++....+          ..|.+||..+++.+..+.   +...+.+++|+|
T Consensus       233 ~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~---~~~~~~~~a~sp  309 (355)
T d2bbkh_         233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQ  309 (355)
T ss_dssp             CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECC
T ss_pred             ccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEec---CCCCEEEEEEcC
Confidence              100000 0000011113458899999987765543          369999999998887776   456789999999


Q ss_pred             CCCE-EEEEecCCCceeeeeeeCCC
Q psy17902        419 DHKH-LVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       419 d~~~-l~~~~~~d~~i~~W~~~~~~  442 (454)
                      ||+. |+++++.|+.|.+||..++.
T Consensus       310 DG~~~l~v~~~~d~~i~v~D~~tg~  334 (355)
T d2bbkh_         310 DEKPLLYALSTGDKTLYIHDAESGE  334 (355)
T ss_dssp             SSSCEEEEEETTTTEEEEEETTTCC
T ss_pred             CCCeEEEEEECCCCEEEEEECCCCC
Confidence            9984 55555789999999987764

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.80  E-value=2.4e-17  Score=147.45  Aligned_cols=245  Identities=8%  Similarity=0.102  Sum_probs=161.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~  218 (454)
                      |.+.|.+|+|+|||++|++++ .|+.|++|++.............   .....+..++|+|+|++|++++. ++.|.+|+
T Consensus        35 ~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~---~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~  111 (333)
T d1ri6a_          35 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES---ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTR  111 (333)
T ss_dssp             CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE---ECSSCCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             CCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec---ccCCCceEEEEcCCCCEEeecccCCCceeeec
Confidence            888999999999999996665 48999999998654332211100   13345778999999999988875 67889998


Q ss_pred             CCCcc---EEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEE------eeccCCceeEEEeecCCCEE
Q psy17902        219 SSLEH---LHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVET------LFGHQSAITSLDILAKNRVI  288 (454)
Q Consensus       219 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l  288 (454)
                      .....   ......+...+.++.++|+++++++++. +..|.+|+.........      ..........++|++++.++
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~  191 (333)
T d1ri6a_         112 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYA  191 (333)
T ss_dssp             EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEE
T ss_pred             cccccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeE
Confidence            73222   2334456777889999999998888775 45689999876533221      12344556889999999877


Q ss_pred             EEee-CCCcEEEeeccCCeEE-----EEc-------cccCCeEEEEecCCCEEE-EEeCCCCEEEEecCCCccceeeecc
Q psy17902        289 SSGG-TDKSVRVWKIQEESQL-----VFN-------GHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       289 ~~~~-~dg~i~i~d~~~~~~~-----~~~-------~~~~~i~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~  354 (454)
                      +... ..+...+|+.......     ...       ...........+++.+++ ++..++.+.+|++............
T Consensus       192 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (333)
T d1ri6a_         192 YCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF  271 (333)
T ss_dssp             EEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE
T ss_pred             EeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEE
Confidence            6554 5566777776432211     111       011122333445566555 4457789999998766554443322


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT  394 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~  394 (454)
                      ..      ....+..++|+|+|++|++++ .++.|.+|++.
T Consensus       272 ~~------~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id  306 (333)
T d1ri6a_         272 QP------TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV  306 (333)
T ss_dssp             EE------CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred             eC------CCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEE
Confidence            21      122367899999999877665 56889999664

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.79  E-value=2e-16  Score=143.91  Aligned_cols=266  Identities=9%  Similarity=-0.025  Sum_probs=179.0

Q ss_pred             eEeccCCCCCCeEEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcccCC-CCCCceEEEEEeCCC
Q psy17902        134 TKFNGKPHRASITCIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTDR-KSYPPILALAVANNN  202 (454)
Q Consensus       134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~  202 (454)
                      ..+.+  +..+  .++|+|||++|++++          .++.|.+||+.+++....+....... ........+.|++++
T Consensus        61 ~~~~~--~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg  136 (373)
T d2madh_          61 GHVNG--GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN  136 (373)
T ss_pred             EEEeC--CCCc--cEEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCC
Confidence            34544  4433  799999999999875          35789999999988876654311100 001123457889998


Q ss_pred             cEEEEec--CCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeecc------C
Q psy17902        203 ELVASGD--NNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGH------Q  273 (454)
Q Consensus       203 ~~l~~~~--~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~------~  273 (454)
                      +.++...  .++.+.+|+.......   .+.....++.++|+++.+ ++.+.|+.+.+|+...+........+      .
T Consensus       137 ~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (373)
T d2madh_         137 ADLLFFQFAAGPAVGLVVQGGSSDD---QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQN  213 (373)
T ss_pred             CcEEEEEEcCCCceEEeeccCCeEE---EEeccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCcc
Confidence            8766554  4567888887433322   233346688899998654 67888999999999988776554322      1


Q ss_pred             CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE---EccccC---------------------CeEEEEecCCCEEE
Q psy17902        274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV---FNGHSR---------------------GIDMTRRVNDQQFI  329 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~---------------------~i~~~~~~~~~~l~  329 (454)
                      .....+.+.+++.+ +..+.++.+.+|+........   ...+..                     ........++..++
T Consensus       214 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  292 (373)
T d2madh_         214 LLTQPAQANKSGRI-VWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWK  292 (373)
T ss_pred             ceeeeEEECCCceE-EEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEE
Confidence            22334555555544 456678899999988765431   111110                     01112222344566


Q ss_pred             EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEeccCCC
Q psy17902        330 TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQDIPL  407 (454)
Q Consensus       330 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~  407 (454)
                      +...++.+.+||+.+++.+..+...          ..+..++|+|||+  ++++++.|++|++||+.+++.+..+..  +
T Consensus       293 ~~~~~~~v~~~d~~t~~~~~~~~~~----------~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~--~  360 (373)
T d2madh_         293 LHAAAKEVTSVTGLVGQTSSQISLG----------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVE--L  360 (373)
T ss_pred             eecCCCeEEEEECCCCcEEEEecCC----------CCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECC--C
Confidence            6777889999999999988877532          3388999999998  457889999999999999999999876  5


Q ss_pred             ceeeeEEEEcCC
Q psy17902        408 SGVINSLVFTSD  419 (454)
Q Consensus       408 ~~~v~~l~~s~d  419 (454)
                      ....+.|++.++
T Consensus       361 g~~P~~l~~~~~  372 (373)
T d2madh_         361 GSGPQVLSVMNE  372 (373)
T ss_pred             CCCCcEEEEecC
Confidence            555677776543

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.78  E-value=1.2e-16  Score=144.25  Aligned_cols=257  Identities=7%  Similarity=-0.058  Sum_probs=167.1

Q ss_pred             EEEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcccC-CCCCCceEEEEEeCCCcEEEEec--CCC
Q psy17902        146 TCIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTD-RKSYPPILALAVANNNELVASGD--NNS  212 (454)
Q Consensus       146 ~~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~--~dg  212 (454)
                      ..++|||||++|++++          .++.|.+||+.+++....+...... .........++|+++++++++++  .+.
T Consensus        50 ~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~  129 (355)
T d2bbkh_          50 PNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAP  129 (355)
T ss_dssp             CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSC
T ss_pred             CceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCc
Confidence            3799999999888654          4789999999998877654322111 11223345689999999887764  457


Q ss_pred             cEEEEeC-CCccEEeecccCC-------CeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902        213 NIKLWSS-SLEHLHTFTGHKA-------PITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLDILA  283 (454)
Q Consensus       213 ~v~vw~~-~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~  283 (454)
                      .+.+|+. .+..+..+..+..       ....+.+++++..++... .++.+.+++.....     ..+...+....+.+
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~  204 (355)
T d2bbkh_         130 AVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-----PEDEFLINHPAYSQ  204 (355)
T ss_dssp             EEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS-----CTTSCBCSCCEEET
T ss_pred             eeeeeecCCCcEeeEEecCCcceEeecCCcceEEEcCCCCEEEEEecCCCeEEEEeccccc-----ceecceeeeccccC
Confidence            8999999 5555555544322       122344445544443322 22333343333221     13444566677888


Q ss_pred             CCCEEEEeeCCCcEEEeeccCCeEEEEcc---c-----------cCCeEEEEecCCCEEEEEeCC----------CCEEE
Q psy17902        284 KNRVISSGGTDKSVRVWKIQEESQLVFNG---H-----------SRGIDMTRRVNDQQFITCGED----------GTLSL  339 (454)
Q Consensus       284 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~-----------~~~i~~~~~~~~~~l~~~~~d----------g~i~i  339 (454)
                      ++..++.++.++.+++|++..+....+..   +           .........+++..++....+          ..|.+
T Consensus       205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v  284 (355)
T d2bbkh_         205 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV  284 (355)
T ss_dssp             TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred             CCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEE
Confidence            88888889999999999998876542211   1           111123344455655554432          36999


Q ss_pred             EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      ||+.+++.+..+....          .+.+++|+|+|+  ++++++.|+.|++||+.+++.+..+..  +......+.+.
T Consensus       285 ~d~~t~~~~~~~~~~~----------~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~--~G~~p~~i~~~  352 (355)
T d2bbkh_         285 LDAKTGERLAKFEMGH----------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ--LGHGPQVITTA  352 (355)
T ss_dssp             EETTTCCEEEEEEEEE----------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC--CCSSCCEEECC
T ss_pred             EeCCCCcEEEEecCCC----------CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEeC--cCCCccEEEeC
Confidence            9999998888776433          278999999997  566778899999999999999988875  34444555555


Q ss_pred             CC
Q psy17902        418 SD  419 (454)
Q Consensus       418 ~d  419 (454)
                      ++
T Consensus       353 d~  354 (355)
T d2bbkh_         353 DM  354 (355)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.69  E-value=1e-15  Score=138.90  Aligned_cols=287  Identities=7%  Similarity=-0.059  Sum_probs=179.2

Q ss_pred             CCCCeEEEEEcCCCCEEEE---EeCCC--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------
Q psy17902        141 HRASITCIAVTSDSKHVYS---ACKDG--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------  209 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~---~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------  209 (454)
                      +.++...++..++++..+.   ...+|  .|.+||..+++.+.....      +..+  .++|+|+|++|++.+      
T Consensus        18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~------~~~~--~~a~spDg~~i~~~~~~~~~~   89 (368)
T d1mdah_          18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLG------AFLS--LAVAGHSGSDFALASTSFARS   89 (368)
T ss_dssp             CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE------CTTC--EEEECTTSSCEEEEEEEETTT
T ss_pred             cCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeC------CCCC--cceECCCCCEEEEEcccCccc
Confidence            5666667777888875432   23344  466779888887766542      3222  589999999888754      


Q ss_pred             ----CCCcEEEEeC-CCccEEeecccCC-------CeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCce
Q psy17902        210 ----NNSNIKLWSS-SLEHLHTFTGHKA-------PITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAI  276 (454)
Q Consensus       210 ----~dg~v~vw~~-~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v  276 (454)
                          .++.|.+||. +++.+..+..+..       ....++|+|||++|+++. .++.|.+||+.+++.+..+..+....
T Consensus        90 ~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~  169 (368)
T d1mdah_          90 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH  169 (368)
T ss_dssp             TSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC
T ss_pred             cccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce
Confidence                3678999999 6666666543322       234689999999998876 57999999999999888776554332


Q ss_pred             eEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE-------EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902        277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLV-------FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH  349 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~  349 (454)
                      .   +......++..+.||.+.+|++.......       +..+..............++ ....+.+.++++.......
T Consensus       170 ~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~v~~~~~~~~~~~~  245 (368)
T d1mdah_         170 I---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLV-WAVASSILQGDIPAAGATM  245 (368)
T ss_dssp             C---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEE-ECBSSCCEEEECCSSCCEE
T ss_pred             E---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEEE-EecCCCEEEEeecCCceEE
Confidence            1   11223566667788888888876544331       11111222222333333322 2334556666655443322


Q ss_pred             eeecccCCCC---CCCCCCcEEEEEEecCCCEEEEecCC---------CcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        350 TIPVAHGYDS---SSSEPNWITSVACLHNSDLVASGSYD---------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       350 ~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~d---------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      ..........   ....+.....++++|++..+++...+         ..|.+||..+++.+..+.   +...+.+++|+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~---~~~~~~~~a~s  322 (368)
T d1mdah_         246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDAIIAA  322 (368)
T ss_dssp             ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---EEEEECEEEEC
T ss_pred             EeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEec---CCCceeEEEEC
Confidence            2111000000   00001112347889998876654322         359999999998877765   56779999999


Q ss_pred             CCCC-EEEEEecCCCceeeeeeeCCC
Q psy17902        418 SDHK-HLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       418 ~d~~-~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |||+ +|+++...++.|.+||..++.
T Consensus       323 pDG~~~ly~s~~~~~~v~v~D~~tgk  348 (368)
T d1mdah_         323 QDGASDNYANSAGTEVLDIYDAASDQ  348 (368)
T ss_dssp             CSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred             CCCCEEEEEEeCCCCeEEEEECCCCC
Confidence            9997 456665789999999987764

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.69  E-value=9.9e-15  Score=136.95  Aligned_cols=144  Identities=12%  Similarity=0.009  Sum_probs=112.5

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---------CCcEEEE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---------NSNIKLW  217 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~v~vw  217 (454)
                      .+.|.+++.+++.  .+|.|.+||+.+++....+.. .....+...|.++.|||||++|+.++.         ++.+.||
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~-~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~   97 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY   97 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEEECT-TTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEEEch-hhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEE
Confidence            4689999987764  578899999999887543321 222356678999999999999998753         5678999


Q ss_pred             eCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec------------------cCCceeEE
Q psy17902        218 SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG------------------HQSAITSL  279 (454)
Q Consensus       218 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------~~~~v~~~  279 (454)
                      |+.+..+..+..|...+..+.|+|||+.|+... ++.+++|++.++........                  ..+....+
T Consensus        98 d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~  176 (470)
T d2bgra1          98 DLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL  176 (470)
T ss_dssp             ETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred             ECCCCcccccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCcccc
Confidence            998888888999999999999999999999864 67899999998876544321                  12334668


Q ss_pred             EeecCCCEEEEeeCC
Q psy17902        280 DILAKNRVISSGGTD  294 (454)
Q Consensus       280 ~~~~~~~~l~~~~~d  294 (454)
                      .|+|+|+.|+....|
T Consensus       177 ~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         177 WWSPNGTFLAYAQFN  191 (470)
T ss_dssp             EECTTSSEEEEEEEE
T ss_pred             EECCCCCccceeEec
Confidence            899999999887654

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.64  E-value=9.3e-14  Score=125.27  Aligned_cols=275  Identities=12%  Similarity=-0.004  Sum_probs=176.8

Q ss_pred             EEEEeCCCeEEEEEcCCCceecccCCcccC------------------------CCCCCceEEEEEeCCCcEEEEec-CC
Q psy17902        157 VYSACKDGIIIKWLLETRSKVCSSPFVKTD------------------------RKSYPPILALAVANNNELVASGD-NN  211 (454)
Q Consensus       157 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------------------~~~~~~v~~~~~~~~~~~l~~~~-~d  211 (454)
                      +++|+.+|.|++|++.+++.+..++.....                        ..|........++|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            567778999999999988877766542211                        11333455556689999986664 57


Q ss_pred             CcEEEEeC-CCccEEeec-ccCCCeEEEEEcCCCCE--EEEEeCCC-----------------cEEEEeCCCceeEEEee
Q psy17902        212 SNIKLWSS-SLEHLHTFT-GHKAPITGLAISFECDT--LYSSSNDR-----------------SIKVWNIEDRAYVETLF  270 (454)
Q Consensus       212 g~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~~~~~--l~~~~~dg-----------------~i~iwd~~~~~~~~~~~  270 (454)
                      +.|.++|+ +.+....+. .+...+..++|+|+++.  ++..+.+.                 .+..+|..+.+....+.
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            89999999 555555443 35678999999999884  44444332                 23557888877776665


Q ss_pred             ccCCceeEEEeecCCCEEEEeeCCC-----------------------------------------cEEEeeccCCeEE-
Q psy17902        271 GHQSAITSLDILAKNRVISSGGTDK-----------------------------------------SVRVWKIQEESQL-  308 (454)
Q Consensus       271 ~~~~~v~~~~~~~~~~~l~~~~~dg-----------------------------------------~i~i~d~~~~~~~-  308 (454)
                      .. .....+.++|+|+++++++.+.                                         .+.+++......+ 
T Consensus       174 v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~  252 (441)
T d1qnia2         174 VD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTR  252 (441)
T ss_dssp             ES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEE
T ss_pred             cC-CCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEE
Confidence            33 4568899999999988776542                                         2333333332222 


Q ss_pred             EEccccCCeEEEEecCCCEEE-EEeCCCCEEEEecCCCccc--------eeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902        309 VFNGHSRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPT--------HTIPVAHGYDSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       309 ~~~~~~~~i~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      .......+..+...+++.+++ ++..+++|.+||+.+....        ..+.....      ..-.....+|+++|..+
T Consensus       253 ~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~------~glgplh~~fd~~g~~y  326 (441)
T d1qnia2         253 YIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPE------LGLGPLHTTFDGRGNAY  326 (441)
T ss_dssp             EECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCB------CCSCEEEEEECSSSEEE
T ss_pred             EEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecc------cccCcccceecCCceEE
Confidence            333344455566677888765 4568999999998653211        11111000      01114557899999989


Q ss_pred             EEecCCCcEEEEEcCCC----------ceeeEec---cCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        380 ASGSYDGCVKLWKITPK----------RTLEFLQ---DIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       380 ~~~~~dg~v~iwd~~~~----------~~~~~~~---~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                      .+...|..|..|++...          ..+..+.   ...|...+.+.+|+|||+||+++ +.-..=+++.+-
T Consensus       327 ts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~-~k~s~dr~~~~g  398 (441)
T d1qnia2         327 TTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL-SKFSKDRFLPVG  398 (441)
T ss_dssp             EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE-ESCCGGGSCCCS
T ss_pred             EcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec-CccccccCcCCC
Confidence            99999999999997421          2233331   12377778888999999999998 443333444443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.63  E-value=1.6e-14  Score=130.87  Aligned_cols=252  Identities=8%  Similarity=-0.051  Sum_probs=162.3

Q ss_pred             EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcccCC-CCCCceEEEEEeCCCcEEEEec-CCCcE
Q psy17902        147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTDR-KSYPPILALAVANNNELVASGD-NNSNI  214 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~-~dg~v  214 (454)
                      .++|+|||++|++++          .|+.|.+||..+++....+....... ........++|+|||++|+++. .++.+
T Consensus        69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v  148 (368)
T d1mdah_          69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA  148 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred             cceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeE
Confidence            589999999998865          36789999999988776654321110 1112334689999999998876 46999


Q ss_pred             EEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE------eeccCCceeEEEeecCCCE
Q psy17902        215 KLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET------LFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       215 ~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~------~~~~~~~v~~~~~~~~~~~  287 (454)
                      .+||+ ..+.+..+..+.....   +......+++.+.||.+.+|++........      +..+...+..+.+.+++..
T Consensus       149 ~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (368)
T d1mdah_         149 AGLSVPGASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGML  225 (368)
T ss_dssp             EEEEETTTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEE
T ss_pred             EEEECCCCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeecccccCcEE
Confidence            99999 5666666554443321   112345666777788888888765433221      1234445556777777766


Q ss_pred             EEEeeCCCcEEEeeccCCeEEEEcccc--------------CCeEEEEecCCCEEEEEeCC---------CCEEEEecCC
Q psy17902        288 ISSGGTDKSVRVWKIQEESQLVFNGHS--------------RGIDMTRRVNDQQFITCGED---------GTLSLWSILK  344 (454)
Q Consensus       288 l~~~~~dg~i~i~d~~~~~~~~~~~~~--------------~~i~~~~~~~~~~l~~~~~d---------g~i~iwd~~~  344 (454)
                      +.+  ..+.++++++............              ........+++..++....+         ..|.+||..+
T Consensus       226 ~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t  303 (368)
T d1mdah_         226 VWA--VASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV  303 (368)
T ss_dssp             EEC--BSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS
T ss_pred             EEe--cCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCC
Confidence            554  3556777776655443221110              11123344455555443321         3588999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF  416 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~  416 (454)
                      ++.+..+....          .+.+++|+|||+  +++++..++.|++||..+++.+..+..   ....+.|++
T Consensus       304 ~~~~~~~~~~~----------~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~---g~~P~~l~~  364 (368)
T d1mdah_         304 GQTSGPISNGH----------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL---DKGPESLSV  364 (368)
T ss_dssp             CCEEECCEEEE----------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC---CSCCCEEEC
T ss_pred             CcEeEEecCCC----------ceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEEC---CCCCCEEEE
Confidence            98888776432          288899999997  456777899999999999999888864   333455554

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.47  E-value=4.9e-11  Score=107.04  Aligned_cols=261  Identities=8%  Similarity=0.017  Sum_probs=153.4

Q ss_pred             CCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccEEee-cccCCCeEEEEEcCCCCEEEEEe---CCCcEEEEeCCCc
Q psy17902        190 YPPILALAVANNNELVASGDNNSNIKLWSS--SLEHLHTF-TGHKAPITGLAISFECDTLYSSS---NDRSIKVWNIEDR  263 (454)
Q Consensus       190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~  263 (454)
                      ...+..|+|++++++|+++.. +.+..|.+  .+...... .........++++++++.++...   ..+.|..+.+...
T Consensus        39 ~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~  117 (365)
T d1jofa_          39 DEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF  117 (365)
T ss_dssp             TCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred             CCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCC
Confidence            345677999999999988764 56788877  33333221 11223455677888887443322   2455655543211


Q ss_pred             -ee---------------EEE-eeccCCceeEEEeecCCCEEEEeeC-CCcEEEeeccCCeEE----E--Ecc-ccCCeE
Q psy17902        264 -AY---------------VET-LFGHQSAITSLDILAKNRVISSGGT-DKSVRVWKIQEESQL----V--FNG-HSRGID  318 (454)
Q Consensus       264 -~~---------------~~~-~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~----~--~~~-~~~~i~  318 (454)
                       ..               ... -......+.++.|+|+|+++++++. ...|.+|+......+    .  ... ..++..
T Consensus       118 ~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~  197 (365)
T d1jofa_         118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW  197 (365)
T ss_dssp             CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred             CCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEE
Confidence             00               000 0112234789999999998887754 357888876543322    1  111 223344


Q ss_pred             EEEecCCCEEEEEe-CCCCEEEEecCCCccceeee-----cccCC-----CCCCCCCCcEEEEEEecCCCEEEEecC---
Q psy17902        319 MTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIP-----VAHGY-----DSSSSEPNWITSVACLHNSDLVASGSY---  384 (454)
Q Consensus       319 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-----~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~---  384 (454)
                      ..+.+++.++++.. .++.|.+|++..........     .....     ............+.++|+|++|+++..   
T Consensus       198 i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~  277 (365)
T d1jofa_         198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK  277 (365)
T ss_dssp             EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred             EEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCC
Confidence            55556677665444 68899999987654332211     11100     001122334678999999999887642   


Q ss_pred             ---CCcEEEEEcCCCceeeE----eccCCCceeeeEEEEcC-CCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902        385 ---DGCVKLWKITPKRTLEF----LQDIPLSGVINSLVFTS-DHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI  451 (454)
Q Consensus       385 ---dg~v~iwd~~~~~~~~~----~~~~~~~~~v~~l~~s~-d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~  451 (454)
                         .+.|..|++.....+..    ............++|+| +|++|+++...++.|.+|+........+..+++
T Consensus       278 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~~l~~~~~~~v  352 (365)
T d1jofa_         278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVARVRI  352 (365)
T ss_dssp             TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEEEEEC
T ss_pred             CccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCCcCcEEEEEEC
Confidence               23477888765432221    12212334567899998 899999997889999999987665444444443

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.47  E-value=4.7e-12  Score=118.34  Aligned_cols=108  Identities=12%  Similarity=0.002  Sum_probs=80.9

Q ss_pred             EeccCCCCCCeEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE
Q psy17902        135 KFNGKPHRASITCIAVTSDSKHVYSACK---------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV  205 (454)
Q Consensus       135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l  205 (454)
                      .|..  |...|.++.|||||++|+.++.         ++.+.|||+.++.... +.      .+...+..+.|||||++|
T Consensus        56 ~~~~--~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~-l~------~~~~~~~~~~~SPDG~~i  126 (470)
T d2bgra1          56 TFDE--FGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EE------RIPNNTQWVTWSPVGHKL  126 (470)
T ss_dssp             TTTT--SSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SS------CCCTTEEEEEECSSTTCE
T ss_pred             hhhh--ccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccc-cc------cCCccccccccccCccee
Confidence            4445  7788999999999999998853         5788999999876543 33      466789999999999999


Q ss_pred             EEecCCCcEEEEeCC-CccEEeecc------------------cCCCeEEEEEcCCCCEEEEEeCC
Q psy17902        206 ASGDNNSNIKLWSSS-LEHLHTFTG------------------HKAPITGLAISFECDTLYSSSND  252 (454)
Q Consensus       206 ~~~~~dg~v~vw~~~-~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~d  252 (454)
                      |... ++.+.+|+.. +........                  ..+....+.|+|||++|+....|
T Consensus       127 a~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d  191 (470)
T d2bgra1         127 AYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFN  191 (470)
T ss_dssp             EEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred             eEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEec
Confidence            9965 6789999984 433332221                  12334568899999999987654

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.46  E-value=4.6e-11  Score=104.39  Aligned_cols=227  Identities=13%  Similarity=0.079  Sum_probs=157.6

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-EEEe-
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-VETL-  269 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~-  269 (454)
                      .+..++++|||+++++...++.|..|+..+. ...+......+.+++|.++|+++++...++.+..|+...... ...+ 
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~~~  107 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL  107 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC-EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecccccceeecc
Confidence            5778999999999999999999999987655 344555667899999999999999988888888887653321 1111 


Q ss_pred             -eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc-----------cCCeEEEEecCCCEEEEEeCCCCE
Q psy17902        270 -FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH-----------SRGIDMTRRVNDQQFITCGEDGTL  337 (454)
Q Consensus       270 -~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-----------~~~i~~~~~~~~~~l~~~~~dg~i  337 (454)
                       .......+.+.+.++++++++.+.++.+..++...+........           ......+....+..+++.+..+.|
T Consensus       108 ~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~~~~~i  187 (302)
T d2p4oa1         108 TLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLL  187 (302)
T ss_dssp             ECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEE
T ss_pred             ccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccCCceeeecCCCCeE
Confidence             23455678999999999998888889999888887654422111           112233444455566677788889


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE-
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF-  416 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~-  416 (454)
                      ..+++..............       ......++++++|++.++...++.|..++.. ++.............+++++| 
T Consensus       188 ~~~~~~~~~~~~~~~~~~~-------~~~pdgia~d~dG~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~~~~pt~vafg  259 (302)
T d2p4oa1         188 LRIPVDSTDKPGEPEIFVE-------QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFG  259 (302)
T ss_dssp             EEEEBCTTSCBCCCEEEEE-------SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEEC
T ss_pred             EeccccccccccccccccC-------CCCCcceEECCCCCEEEEEcCCCcEEEECCC-CCEEEEEecCCCCCCceEEEEc
Confidence            9888866543332221111       1114569999999988888888999999765 333333322113345789999 


Q ss_pred             --cCCCCEEEEEe
Q psy17902        417 --TSDHKHLVAGI  427 (454)
Q Consensus       417 --s~d~~~l~~~~  427 (454)
                        ++|++.|++++
T Consensus       260 ~~~~D~~~Lyvtt  272 (302)
T d2p4oa1         260 QTEGDCTAIYVVT  272 (302)
T ss_dssp             CSTTTTTEEEEEE
T ss_pred             CCCCCCCEEEEEC
Confidence              78899888773

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.40  E-value=5.8e-10  Score=97.50  Aligned_cols=242  Identities=6%  Similarity=-0.034  Sum_probs=151.2

Q ss_pred             ceEEEEEeCCCcEEEEecC-------CCcEEEEeCCCccEEeecc-----cCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17902        192 PILALAVANNNELVASGDN-------NSNIKLWSSSLEHLHTFTG-----HKAPITGLAISFECDTLYSSSNDRSIKVWN  259 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~-------dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd  259 (454)
                      ..-.++|.++|+++++...       +|.|..||..+.....+..     ..+....++|.++++.|+++...+.|..++
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~~~   98 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQ   98 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCCEEEEEECCCeEEEEe
Confidence            4667899999997776543       3678888885544333321     123467899999999888888777899999


Q ss_pred             CCCceeEEEeeccC----CceeEEEeecCCCEEEEeeC---------------CCcEEEeeccCCeEEEEccccCCeEE-
Q psy17902        260 IEDRAYVETLFGHQ----SAITSLDILAKNRVISSGGT---------------DKSVRVWKIQEESQLVFNGHSRGIDM-  319 (454)
Q Consensus       260 ~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~~~~i~~-  319 (454)
                      ..............    ...+.+.+.++|++.++-..               .|.|+.++... ...........-+- 
T Consensus        99 ~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~dg-~~~~~~~~~~~pNGi  177 (314)
T d1pjxa_          99 TDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-QMIQVDTAFQFPNGI  177 (314)
T ss_dssp             TTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-CEEEEEEEESSEEEE
T ss_pred             CCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeecC-ceeEeeCCcceeeee
Confidence            87654322211111    13577999999988776422               23444444433 22222222111222 


Q ss_pred             EEecCCC-----EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902        320 TRRVNDQ-----QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT  394 (454)
Q Consensus       320 ~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~  394 (454)
                      .+.++++     ++++-+..+.|..|++.....+...........  ........+++.++|++.++....+.|.+|+..
T Consensus       178 ~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~--~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~  255 (314)
T d1pjxa_         178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFDEDNNLLVANWGSSHIEVFGPD  255 (314)
T ss_dssp             EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred             EECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccc--cccccceeeEEecCCcEEEEEcCCCEEEEEeCC
Confidence            3333332     344556788899998764433322211111100  112236789999999988887778899999988


Q ss_pred             CCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902        395 PKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT  438 (454)
Q Consensus       395 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~  438 (454)
                      .+..+..+..  ....+++++|.||++.|+++.+.+++|...+.
T Consensus       256 ~g~~~~~i~~--p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         256 GGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             CBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             CCEEEEEEEC--CCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            7776666654  34567899999999988777677888877664

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.38  E-value=3.5e-10  Score=96.30  Aligned_cols=238  Identities=12%  Similarity=0.026  Sum_probs=149.7

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS  219 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~  219 (454)
                      |.-....|+++++|++.++.. ..+.+..++...........      ........++++++++++++....+.+++++.
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~   85 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPF------NGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAG   85 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCC------CSCCSCCCEEECTTCCEEEEETTTEEEEECTT
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEecc------CCccCceEEEEcCCCCEEEeeeeeceeeeeee
Confidence            444568999999999766654 45777777665443322211      12234567899999998877776666666654


Q ss_pred             CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEE
Q psy17902        220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV  299 (454)
Q Consensus       220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i  299 (454)
                      ................++++.++++++++-..+..+..++..................+++++++++++++...++.|..
T Consensus        86 ~~~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~  165 (260)
T d1rwia_          86 SNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVK  165 (260)
T ss_dssp             CSCCEECCCCSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEE
T ss_pred             ccceeeeeeeeeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccc
Confidence            33222222223356789999999988777666777888877654432222222345578999999998888888889999


Q ss_pred             eeccCCeEEEEc-cccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902        300 WKIQEESQLVFN-GHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD  377 (454)
Q Consensus       300 ~d~~~~~~~~~~-~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~  377 (454)
                      ++.......... ........+.+ ++++++++....+.|..++...... ..+.. .       .-.....|+++++|+
T Consensus       166 ~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~-~-------~~~~P~~i~~d~~g~  236 (260)
T d1rwia_         166 LEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPF-T-------GLNTPLAVAVDSDRT  236 (260)
T ss_dssp             ECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCC-C-------SCCCEEEEEECTTCC
T ss_pred             cccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEcc-C-------CCCCeEEEEEeCCCC
Confidence            998876555332 22222333444 5566666666778888887654322 11111 1       112378999999998


Q ss_pred             EEEEecCCCcEEEEEc
Q psy17902        378 LVASGSYDGCVKLWKI  393 (454)
Q Consensus       378 ~l~~~~~dg~v~iwd~  393 (454)
                      ++++-..+++|+.++.
T Consensus       237 l~vad~~~~rI~~i~~  252 (260)
T d1rwia_         237 VYVADRGNDRVVKLTS  252 (260)
T ss_dssp             EEEEEGGGTEEEEECC
T ss_pred             EEEEECCCCEEEEEeC
Confidence            8777666776765553

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.35  E-value=9.4e-11  Score=105.45  Aligned_cols=224  Identities=10%  Similarity=0.043  Sum_probs=139.5

Q ss_pred             EEEecCCCcEEEEeC-CCccEEeecc------------------------------cCCCeEEEEEcCCCCEEEEEe-CC
Q psy17902        205 VASGDNNSNIKLWSS-SLEHLHTFTG------------------------------HKAPITGLAISFECDTLYSSS-ND  252 (454)
Q Consensus       205 l~~~~~dg~v~vw~~-~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~l~~~~-~d  252 (454)
                      +++|+.+|.|++|++ +++.+.++.-                              |...+....++|||++|++.. .+
T Consensus        14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~   93 (441)
T d1qnia2          14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN   93 (441)
T ss_dssp             EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred             EEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEEEcCCC
Confidence            566777899999998 5555544321                              223344455578999887765 67


Q ss_pred             CcEEEEeCCCceeEEEee-ccCCceeEEEeecCCC--EEEEeeCCC-----------------cEEEeeccCCeEE-EEc
Q psy17902        253 RSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNR--VISSGGTDK-----------------SVRVWKIQEESQL-VFN  311 (454)
Q Consensus       253 g~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~--~l~~~~~dg-----------------~i~i~d~~~~~~~-~~~  311 (454)
                      +.|.++|+.+++....+. .+...+..++|+|+++  +++..+.+.                 .+..+|..+.... ...
T Consensus        94 ~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~  173 (441)
T d1qnia2          94 TRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVI  173 (441)
T ss_dssp             TEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEE
T ss_pred             CEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCccceeeEEEe
Confidence            899999999998877654 4677889999999997  444444332                 1244666665554 222


Q ss_pred             cccCCeEEEEecCCCEEEEEeCC-----------------------------------------CCEEEEecCCCcccee
Q psy17902        312 GHSRGIDMTRRVNDQQFITCGED-----------------------------------------GTLSLWSILKKVPTHT  350 (454)
Q Consensus       312 ~~~~~i~~~~~~~~~~l~~~~~d-----------------------------------------g~i~iwd~~~~~~~~~  350 (454)
                      .......+.+.+++.++++.+.+                                         +.+.+++......+..
T Consensus       174 v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~  253 (441)
T d1qnia2         174 VDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRY  253 (441)
T ss_dssp             ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEE
T ss_pred             cCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEE
Confidence            22333344555566666655533                                         3444444444444444


Q ss_pred             eecccCCCCCCCCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCCcee--------eEecc-CCCceeeeEEEEcCCC
Q psy17902        351 IPVAHGYDSSSSEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPKRTL--------EFLQD-IPLSGVINSLVFTSDH  420 (454)
Q Consensus       351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~~--------~~~~~-~~~~~~v~~l~~s~d~  420 (454)
                      ++...          ....+.++|||+++ +++..+++|.+||+.+....        ..+.. ....-.....+|+++|
T Consensus       254 IPvgk----------sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g  323 (441)
T d1qnia2         254 IPVPK----------NPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRG  323 (441)
T ss_dssp             ECCBS----------SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSS
T ss_pred             EeCCC----------CccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCCc
Confidence            44322          14668999999976 55778999999998642110        11111 0111123456899998


Q ss_pred             CEEEEEecCCCceeeeeee
Q psy17902        421 KHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       421 ~~l~~~~~~d~~i~~W~~~  439 (454)
                      ..+ ++..-|..|..|+..
T Consensus       324 ~~y-ts~~~ds~v~kw~~~  341 (441)
T d1qnia2         324 NAY-TTLFIDSQVCKWNIA  341 (441)
T ss_dssp             EEE-EEETTTTEEEEEEHH
T ss_pred             eEE-EcccccceEEEeccc
Confidence            655 445899999999864

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.33  E-value=5.7e-10  Score=94.92  Aligned_cols=238  Identities=11%  Similarity=0.034  Sum_probs=152.2

Q ss_pred             CceEEEEEeCCCcEEEEe-cCCCcEEEEeCCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902        191 PPILALAVANNNELVASG-DNNSNIKLWSSSLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET  268 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~  268 (454)
                      .....+++.++|++.++. +..+.+..++........+. .-......++++++++++++....+.+++++..+...+..
T Consensus        14 ~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~~~~~~   93 (260)
T d1rwia_          14 LSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP   93 (260)
T ss_dssp             CCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred             CCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCCEEEeeeeeceeeeeeeccceeeee
Confidence            456899999999966654 45577888877433332222 2223457889999998877777777777776665554433


Q ss_pred             eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc
Q psy17902        269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV  346 (454)
Q Consensus       269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~  346 (454)
                      .. ......++++.++++++++-..+..+..++.........  .+...+-.....+.++.+++...++.|..++.....
T Consensus        94 ~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~  172 (260)
T d1rwia_          94 FD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN  172 (260)
T ss_dssp             CC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred             ee-eeeecccccccccceeEeeccccccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccce
Confidence            32 234568999999999888776777777777665443322  122222233334566777777788889999876543


Q ss_pred             cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902        347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ... +...        .......|+++++|+++++....+.|..++.... ....+.. ..-.....|+++++|..+++-
T Consensus       173 ~~~-~~~~--------~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~-~~~~~~~-~~~~~P~~i~~d~~g~l~vad  241 (260)
T d1rwia_         173 QVV-LPFT--------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-TSTVLPF-TGLNTPLAVAVDSDRTVYVAD  241 (260)
T ss_dssp             EEE-CCCS--------SCCSEEEEEECTTCCEEEEETTTTEEEEECTTCS-CCEECCC-CSCCCEEEEEECTTCCEEEEE
T ss_pred             eee-eecc--------ccCCCccceeeeeeeeeeeecCCCEEEEEeCCCC-eEEEEcc-CCCCCeEEEEEeCCCCEEEEE
Confidence            222 1111        1223788999999999888888888888876543 2222222 123457899999999876665


Q ss_pred             ecCCCceeeeeeeCC
Q psy17902        427 IGTEHRFGRWKTIKG  441 (454)
Q Consensus       427 ~~~d~~i~~W~~~~~  441 (454)
                       ..+++|+..+...+
T Consensus       242 -~~~~rI~~i~~~~~  255 (260)
T d1rwia_         242 -RGNDRVVKLTSLEH  255 (260)
T ss_dssp             -GGGTEEEEECCCGG
T ss_pred             -CCCCEEEEEeCCCC
Confidence             56777776665443

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.33  E-value=9.1e-09  Score=88.29  Aligned_cols=243  Identities=10%  Similarity=0.076  Sum_probs=163.1

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCC-cEEEE-ecCCCcEEEEeCCC
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNN-ELVAS-GDNNSNIKLWSSSL  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~-~~~dg~v~vw~~~~  221 (454)
                      ....|+++++++++++-..+..|++||.+ +..+..+...............+++..+. .++++ .+.++.|.+++..+
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g  102 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG  102 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCccccccccccc
Confidence            47899999999988887778999999976 44444433222112222345566666553 34443 34456888888877


Q ss_pred             ccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCCcEE
Q psy17902        222 EHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDKSVR  298 (454)
Q Consensus       222 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~  298 (454)
                      .....+. ........+++.+++.++++....+.+.+++.. ++.+..+.  .+......+++.++++++++....+.|+
T Consensus       103 ~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         103 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             cceeecCCCcccccceeccccCCcEEEEeeccceeeEeccC-CceeecccccccccccceeeeccceeEEeeecccccee
Confidence            7776663 345567889999999988888878889999865 55555542  3556678899999999988888899999


Q ss_pred             EeeccCCeEEEEc--cccCCeEEEEe-cCCCEEEEEeC-CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902        299 VWKIQEESQLVFN--GHSRGIDMTRR-VNDQQFITCGE-DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH  374 (454)
Q Consensus       299 i~d~~~~~~~~~~--~~~~~i~~~~~-~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~  374 (454)
                      +||........+.  +.......++. +.++.+++-+. ++.|.+|+. +++.+..+....       .......+++.|
T Consensus       182 ~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~-------~~~~p~~vav~~  253 (279)
T d1q7fa_         182 VFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-------KHAQCFDVALMD  253 (279)
T ss_dssp             EEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-------CCSCEEEEEEET
T ss_pred             eeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCC-------CCCCEeEEEEeC
Confidence            9998654433432  12222333444 55666665443 456999984 566665554322       122378999999


Q ss_pred             CCCEEEEecCCCcEEEEEcCCCc
Q psy17902        375 NSDLVASGSYDGCVKLWKITPKR  397 (454)
Q Consensus       375 ~~~~l~~~~~dg~v~iwd~~~~~  397 (454)
                      +|.+++ ++.++.|++|......
T Consensus       254 dG~l~V-~~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         254 DGSVVL-ASKDYRLYIYRYVQLA  275 (279)
T ss_dssp             TTEEEE-EETTTEEEEEECSCCC
T ss_pred             CCcEEE-EeCCCeEEEEEeeeec
Confidence            997655 4578899999987553

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.32  E-value=4.8e-09  Score=90.07  Aligned_cols=240  Identities=12%  Similarity=0.112  Sum_probs=160.4

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecc------cCCCeEEEEEcCCCC-EEEEE-eCCCcEEEEeCCC
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTG------HKAPITGLAISFECD-TLYSS-SNDRSIKVWNIED  262 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~------~~~~v~~~~~~~~~~-~l~~~-~~dg~i~iwd~~~  262 (454)
                      .....++++++++++++-..++.|++||.++..+..+..      .......+++.++.. .+++. +.++.|.+++.. 
T Consensus        23 ~~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-  101 (279)
T d1q7fa_          23 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-  101 (279)
T ss_dssp             SCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred             CCccEEEEcCCCCEEEEECCCCEEEEEeCCCCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc-
Confidence            357899999999988887778899999998887766632      122345566665544 33333 345577777764 


Q ss_pred             ceeEEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEec-CCCEEEEEeCCCCEE
Q psy17902        263 RAYVETLF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRRV-NDQQFITCGEDGTLS  338 (454)
Q Consensus       263 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~~-~~~~l~~~~~dg~i~  338 (454)
                      +.....+. ........+++.+++.++++....+.+.+++........+  ..+......+... +++.+++....+.|.
T Consensus       102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~  181 (279)
T d1q7fa_         102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK  181 (279)
T ss_dssp             SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred             ccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCCceeecccccccccccceeeeccceeEEeeecccccee
Confidence            55555553 3445678899999999888877778888888665433333  2223333444444 455666677788999


Q ss_pred             EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902        339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT  417 (454)
Q Consensus       339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s  417 (454)
                      +||.. ++.+..+...       ........|++.++|+++++-+. ++.|.+|+. +|+.+..+...........|++.
T Consensus       182 ~~d~~-G~~~~~~g~~-------g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~  252 (279)
T d1q7fa_         182 VFNYE-GQYLRQIGGE-------GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM  252 (279)
T ss_dssp             EEETT-CCEEEEESCT-------TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred             eeecC-Cceeeeeccc-------ccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEe
Confidence            99974 4444444211       12334789999999997777544 457999984 57777766543334467899999


Q ss_pred             CCCCEEEEEecCCCceeeeeeeCCC
Q psy17902        418 SDHKHLVAGIGTEHRFGRWKTIKGV  442 (454)
Q Consensus       418 ~d~~~l~~~~~~d~~i~~W~~~~~~  442 (454)
                      |||.+ +++ +.+++|++|...+..
T Consensus       253 ~dG~l-~V~-~~n~~v~~fr~~~~~  275 (279)
T d1q7fa_         253 DDGSV-VLA-SKDYRLYIYRYVQLA  275 (279)
T ss_dssp             TTTEE-EEE-ETTTEEEEEECSCCC
T ss_pred             CCCcE-EEE-eCCCeEEEEEeeeec
Confidence            99965 445 468999999876543

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.28  E-value=1.4e-08  Score=86.53  Aligned_cols=235  Identities=9%  Similarity=0.008  Sum_probs=140.7

Q ss_pred             eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCeEEEEEcC
Q psy17902        165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPITGLAISF  241 (454)
Q Consensus       165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~  241 (454)
                      .|.|.|.+........       .....+..-+|||||+.||.....   ..+.+.+..+.....+..+........|+|
T Consensus        20 ~l~i~d~dG~~~~~l~-------~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp   92 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVH-------RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP   92 (269)
T ss_dssp             EEEEEETTSCSCEEEE-------EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECT
T ss_pred             EEEEEcCCCCCcEEEe-------cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeecccccceecC
Confidence            4666676654433322       244567889999999999976543   346666777777777777888999999999


Q ss_pred             CCCEEEEEeC-CCc--EEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEeeCCCc--EEEeeccCCeEEEEccccC
Q psy17902        242 ECDTLYSSSN-DRS--IKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGGTDKS--VRVWKIQEESQLVFNGHSR  315 (454)
Q Consensus       242 ~~~~l~~~~~-dg~--i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~--i~i~d~~~~~~~~~~~~~~  315 (454)
                      +|..++.... ++.  +..+......... ............+++++..+ ++...++.  |.+.++.............
T Consensus        93 dg~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~  171 (269)
T d2hqsa1          93 DGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGS  171 (269)
T ss_dssp             TSSEEEEEECTTSSCEEEEEETTTCCEEE-CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSS
T ss_pred             CCCeeeEeeecCCccceeeccccccccee-eeeccccccccccccccccceecccccCCceEeeeecccccceeeecccc
Confidence            9998887654 332  2333333333222 22344444555667776544 44444554  5555555554444444443


Q ss_pred             Ce-EEEEecCCCEEEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC---CCcEEE
Q psy17902        316 GI-DMTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY---DGCVKL  390 (454)
Q Consensus       316 ~i-~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~v~i  390 (454)
                      .. ...+++++..++..+ ..+...+|..............         ........|||||+.|+-.+.   ...|++
T Consensus       172 ~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~  242 (269)
T d2hqsa1         172 QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS---------TFLDETPSLAPNGTMVIYSSSQGMGSVLNL  242 (269)
T ss_dssp             EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC---------SSSCEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred             cccccccccccceeEEEeecCCceeeeEeecccccceEeec---------CccccceEECCCCCEEEEEEcCCCCcEEEE
Confidence            33 344555677666655 4455555544333222222211         222677899999998765443   346889


Q ss_pred             EEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        391 WKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +++..+.. ..+..  ..+.+...+|||-
T Consensus       243 ~~~dg~~~-~~lt~--~~g~~~~p~WSP~  268 (269)
T d2hqsa1         243 VSTDGRFK-ARLPA--TDGQVKFPAWSPY  268 (269)
T ss_dssp             EETTSCCE-EECCC--SSSEEEEEEECCC
T ss_pred             EECCCCCE-EEEeC--CCCcEEeEEeCCC
Confidence            99976654 44444  4567888999983

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.25  E-value=7.3e-09  Score=90.06  Aligned_cols=225  Identities=15%  Similarity=0.069  Sum_probs=148.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CC
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SL  221 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~  221 (454)
                      .+..++++|||+++++...++.|..|+........ .       .....+.+++|+++|+++++...++.+.+|+.  ..
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~~~-~-------~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~  100 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIH-A-------TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD  100 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEE-E-------ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEEEE-E-------cCCCCcceEEEcCCCCeEEEecCCceEEEEEecccc
Confidence            68899999999999999999999888866432221 1       24457899999999999999888888888876  22


Q ss_pred             ccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec----------cCCceeEEEeecCCCEEE
Q psy17902        222 EHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG----------HQSAITSLDILAKNRVIS  289 (454)
Q Consensus       222 ~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~  289 (454)
                      .....+  .......+.+++.++++++++.+.++.+..++...+........          .......+.+.. +.+++
T Consensus       101 ~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~-~~l~~  179 (302)
T d2p4oa1         101 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG-NFLYV  179 (302)
T ss_dssp             SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET-TEEEE
T ss_pred             cceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccccccC-Cceee
Confidence            222222  23445688999999999888888899999999887754322211          112345666653 34556


Q ss_pred             EeeCCCcEEEeeccCCeEE----EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902        290 SGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN  365 (454)
Q Consensus       290 ~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  365 (454)
                      +.+..+.|+.+++......    ........-......+++++++...++.|..|+.... ..........       ..
T Consensus       180 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~-~~~~~~~~~~-------~~  251 (302)
T d2p4oa1         180 SNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS-TTIIAQAEQG-------VI  251 (302)
T ss_dssp             EETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC-EEEEECGGGT-------CT
T ss_pred             ecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC-EEEEEecCCC-------CC
Confidence            6677888888887654332    1212222223444456777777778899999976533 2222221111       12


Q ss_pred             cEEEEEE---ecCCCEEEEecCC
Q psy17902        366 WITSVAC---LHNSDLVASGSYD  385 (454)
Q Consensus       366 ~i~~~~~---s~~~~~l~~~~~d  385 (454)
                      ..++++|   ++|++.|++++..
T Consensus       252 ~pt~vafg~~~~D~~~Lyvtt~~  274 (302)
T d2p4oa1         252 GSTAVAFGQTEGDCTAIYVVTNG  274 (302)
T ss_dssp             TEEEEEECCSTTTTTEEEEEECT
T ss_pred             CceEEEEcCCCCCCCEEEEECCC
Confidence            2889999   6677877665544

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.25  E-value=1.3e-08  Score=88.64  Aligned_cols=239  Identities=9%  Similarity=0.052  Sum_probs=153.0

Q ss_pred             CeEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        144 SITCIAVTSDSKHVYSACK-------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      ....++|.|+|+++++...       +|.|..||..++..........  .........++|.++++.|+++...+.|..
T Consensus        19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~--~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~   96 (314)
T d1pjxa_          19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV--NGYGGIPAGCQCDRDANQLFVADMRLGLLV   96 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE--TTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred             CCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCcc--ccCCCcceeEEEeCCCCEEEEEECCCeEEE
Confidence            3678899999998776433       4678889888765433221100  011224678999999988888777777888


Q ss_pred             EeCCCccEEeeccc-C----CCeEEEEEcCCCCEEEEEeC---------------CCcEEEEeCCCceeEEEeeccCCce
Q psy17902        217 WSSSLEHLHTFTGH-K----APITGLAISFECDTLYSSSN---------------DRSIKVWNIEDRAYVETLFGHQSAI  276 (454)
Q Consensus       217 w~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~v  276 (454)
                      ++..+.....+... .    ...+.+++.++|++.++-..               .|.|..++.. ++..... ..-...
T Consensus        97 ~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~-~~~~~p  174 (314)
T d1pjxa_          97 VQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFP  174 (314)
T ss_dssp             EETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSE
T ss_pred             EeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec-CceeEee-CCccee
Confidence            88866554433221 1    13578999999987776422               2345555543 3333222 233345


Q ss_pred             eEEEeecCCC-----EEEEeeCCCcEEEeeccCCeEEE----Ec---cc-cCCeEEEE-ecCCCEEEEEeCCCCEEEEec
Q psy17902        277 TSLDILAKNR-----VISSGGTDKSVRVWKIQEESQLV----FN---GH-SRGIDMTR-RVNDQQFITCGEDGTLSLWSI  342 (454)
Q Consensus       277 ~~~~~~~~~~-----~l~~~~~dg~i~i~d~~~~~~~~----~~---~~-~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~  342 (454)
                      +.++|+|++.     ++++-+..+.|..|++.....+.    +.   .. ......+. -.+++.+++....+.|.+||.
T Consensus       175 NGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp  254 (314)
T d1pjxa_         175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP  254 (314)
T ss_dssp             EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred             eeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeC
Confidence            7899998764     44555677889999876543331    11   11 11122333 346777777778899999999


Q ss_pred             CCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCC
Q psy17902        343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITP  395 (454)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~  395 (454)
                      ..+.....+....         ...++++|.|+++ ++++.+.+|.|..+++..
T Consensus       255 ~~g~~~~~i~~p~---------~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         255 DGGQPKMRIRCPF---------EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             TCBSCSEEEECSS---------SCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             CCCEEEEEEECCC---------CCEEEEEEeCCCCEEEEEECCCCcEEEEECCC
Confidence            8887776665432         2289999999987 556667788888888753

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.16  E-value=1.1e-08  Score=91.34  Aligned_cols=248  Identities=7%  Similarity=0.030  Sum_probs=143.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcE--EEEec-CCCcEEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNEL--VASGD-NNSNIKLW  217 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-~dg~v~vw  217 (454)
                      +...+..|+|+|++++|+++.. +.+..|.+............    ........++++++++.  +++.. ..+.|..+
T Consensus        38 ~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~----~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~  112 (365)
T d1jofa_          38 QDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASH----PIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN  112 (365)
T ss_dssp             TTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEE----ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred             CCCCCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeee----cCCCCcEEEEECCCCCEEEEEEecCCCCEEEEe
Confidence            4555778999999999998865 56778877643322211100    01123456777888874  33332 23555554


Q ss_pred             eC--CCccE---------------E-eecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCc-ee--EEEe--eccC
Q psy17902        218 SS--SLEHL---------------H-TFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDR-AY--VETL--FGHQ  273 (454)
Q Consensus       218 ~~--~~~~~---------------~-~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~-~~--~~~~--~~~~  273 (454)
                      .+  .+...               . ........+.++.|+|+|+++++++. ...|.+|+.... ..  ....  ....
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g  192 (365)
T d1jofa_         113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG  192 (365)
T ss_dssp             EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred             EccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCC
Confidence            43  11110               0 01122334789999999999888865 347888876533 22  1121  1234


Q ss_pred             CceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEEEE---ccc-----------------c-CCeEEEEecCCCEEEEE
Q psy17902        274 SAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQLVF---NGH-----------------S-RGIDMTRRVNDQQFITC  331 (454)
Q Consensus       274 ~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~---~~~-----------------~-~~i~~~~~~~~~~l~~~  331 (454)
                      ...+.+.|+|+++++++.. .+++|.+|++........   ...                 . ........+++.+++++
T Consensus       193 ~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvs  272 (365)
T d1jofa_         193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS  272 (365)
T ss_dssp             CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred             CceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEE
Confidence            6678999999999875554 578999999876543211   000                 0 01123445667777665


Q ss_pred             e-CC-----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEe-cCCCcEEEEEcCCC
Q psy17902        332 G-ED-----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASG-SYDGCVKLWKITPK  396 (454)
Q Consensus       332 ~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~-~~dg~v~iwd~~~~  396 (454)
                      . .+     +.|..|++.....+..........   ....+...++++| +|++|+++ ..++.|.+|++...
T Consensus       273 nr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~  342 (365)
T d1jofa_         273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP---TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE  342 (365)
T ss_dssp             EEESSTTSCCEEEEEEECTTSCEEEEEEEEECS---SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred             cccCCCccceEEEEEEecCCCceeeEeEeeEEE---cCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence            4 22     237777776543333222111110   0122356799998 78877665 56789999998654

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.15  E-value=1.1e-07  Score=80.82  Aligned_cols=216  Identities=8%  Similarity=-0.002  Sum_probs=128.3

Q ss_pred             cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902        213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS  289 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~  289 (454)
                      .|.|.|..+.....+..+...+.+-+|||||+.||......   .+.+.+...+... .+..+........|+|++..++
T Consensus        20 ~l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i~   98 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLA   98 (269)
T ss_dssp             EEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEE
T ss_pred             EEEEEcCCCCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccccceecCCCCeee
Confidence            57788887777777777788899999999999998765533   4777777766543 4445777888999999998877


Q ss_pred             EeeC-CCcEEEee--ccCCeEEEEccccCCe-EEEEecCCCE-EEEEeCCCCEEEE--ecCCCccceeeecccCCCCCCC
Q psy17902        290 SGGT-DKSVRVWK--IQEESQLVFNGHSRGI-DMTRRVNDQQ-FITCGEDGTLSLW--SILKKVPTHTIPVAHGYDSSSS  362 (454)
Q Consensus       290 ~~~~-dg~i~i~d--~~~~~~~~~~~~~~~i-~~~~~~~~~~-l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~  362 (454)
                      .... .+...++.  ................ .......+.. +++...+|...+|  ++..+...... .         
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~-~---------  168 (269)
T d2hqsa1          99 FALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT-W---------  168 (269)
T ss_dssp             EEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC-C---------
T ss_pred             EeeecCCccceeecccccccceeeeeccccccccccccccccceecccccCCceEeeeecccccceeee-c---------
Confidence            6543 33333332  2223333222222222 3333344443 4444455554444  44443222111 1         


Q ss_pred             CCCcEEEEEEecCCCEEEEecCC-CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC--Cceeeeeee
Q psy17902        363 EPNWITSVACLHNSDLVASGSYD-GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE--HRFGRWKTI  439 (454)
Q Consensus       363 ~~~~i~~~~~s~~~~~l~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d--~~i~~W~~~  439 (454)
                      .........|+|++..++..+.+ +...+|..........+..  ..+......|||||++|+..+...  ..|.+|+..
T Consensus       169 ~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~d  246 (269)
T d2hqsa1         169 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS--STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD  246 (269)
T ss_dssp             SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC--CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred             ccccccccccccccceeEEEeecCCceeeeEeecccccceEee--cCccccceEECCCCCEEEEEEcCCCCcEEEEEECC
Confidence            12337778999999977776554 4445544433322222222  445567789999999998764333  345566654


Q ss_pred             CC
Q psy17902        440 KG  441 (454)
Q Consensus       440 ~~  441 (454)
                      .+
T Consensus       247 g~  248 (269)
T d2hqsa1         247 GR  248 (269)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.11  E-value=6.1e-08  Score=84.65  Aligned_cols=233  Identities=10%  Similarity=0.094  Sum_probs=147.5

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----CCcEEE
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----NSNIKL  216 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~v~v  216 (454)
                      ..-.+..++|.++|++.++-...|.|..|+..+........      ........++++++|+++++...    .+.+..
T Consensus        38 ~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~------~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~  111 (319)
T d2dg1a1          38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA  111 (319)
T ss_dssp             SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred             CCcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEe------CCCCCeeEEEECCCCCEEEEecCCCccceeEEE
Confidence            33446789999999988877788999999988765443322      23346789999999998777543    234555


Q ss_pred             EeCCCccEEeeccc---CCCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        217 WSSSLEHLHTFTGH---KAPITGLAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       217 w~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      .+..+..+..+..+   ...++.+++.++|++.++...      .+.+..++..... +..+...-...+.|+|+|+++.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~-~~~~~~~~~~pnGia~s~dg~~  190 (319)
T d2dg1a1         112 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-VTPIIQNISVANGIALSTDEKV  190 (319)
T ss_dssp             ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-EEEEEEEESSEEEEEECTTSSE
T ss_pred             EcCCCceeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccce-eEEEeeccceeeeeeeccccce
Confidence            55544444333222   335778999999986665432      2346666655433 3333223344678999999986


Q ss_pred             E-EEeeCCCcEEEeeccCCeEE------E---E-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902        288 I-SSGGTDKSVRVWKIQEESQL------V---F-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG  356 (454)
Q Consensus       288 l-~~~~~dg~i~i~d~~~~~~~------~---~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~  356 (454)
                      | ++-+..+.|+.|++......      .   . .....+-.+..-.+++.+++....+.|.+||. .++.+..+.....
T Consensus       191 lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~  269 (319)
T d2dg1a1         191 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGR  269 (319)
T ss_dssp             EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTG
T ss_pred             EEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCc
Confidence            5 55566789999998643111      0   1 11111222334456777777788999999995 6888887765432


Q ss_pred             CCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902        357 YDSSSSEPNWITSVACLHNSDLVASGSY  384 (454)
Q Consensus       357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~  384 (454)
                      ..   .+...+++++|.+.+..+++.+.
T Consensus       270 ~~---~~~~~~~~~~~~~~~~~~~~t~~  294 (319)
T d2dg1a1         270 DE---GHMLRSTHPQFIPGTNQLIICSN  294 (319)
T ss_dssp             GG---TCSCBCCEEEECTTSCEEEEEEE
T ss_pred             CC---CcCceeeeEEEeCCCCEEEEEcC
Confidence            11   12334789999998876665543

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.07  E-value=5.2e-07  Score=78.56  Aligned_cols=231  Identities=10%  Similarity=-0.030  Sum_probs=146.4

Q ss_pred             ceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc-EEeecccCCCeEEEEEcCCCCEEEEEeC----CCcEEEEeCCCceeE
Q psy17902        192 PILALAVANNNELVASGDNNSNIKLWSSSLEH-LHTFTGHKAPITGLAISFECDTLYSSSN----DRSIKVWNIEDRAYV  266 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~  266 (454)
                      .+..++|.++|++.++-...+.|..|+..+.. ...+.........++++++|+++++...    .+.|...+.......
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~  120 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ  120 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCceee
Confidence            45688999999987777788999999985554 3444455667899999999987776543    234555665555443


Q ss_pred             EEeec--cCCceeEEEeecCCCEEEEeeC------CCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEE-EEEeCCCC
Q psy17902        267 ETLFG--HQSAITSLDILAKNRVISSGGT------DKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQF-ITCGEDGT  336 (454)
Q Consensus       267 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l-~~~~~dg~  336 (454)
                      .....  -....+.+.+.++|++.++...      .+.+..++..................+.+ ++++.| ++-+..+.
T Consensus       121 ~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~  200 (319)
T d2dg1a1         121 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR  200 (319)
T ss_dssp             EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE
T ss_pred             eeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccceeEEEeeccceeeeeeeccccceEEEecccCCc
Confidence            33321  2234678999999987765432      12355555544433322222222333444 456655 55567889


Q ss_pred             EEEEecCCCccc-eeeec--ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC----Cce
Q psy17902        337 LSLWSILKKVPT-HTIPV--AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP----LSG  409 (454)
Q Consensus       337 i~iwd~~~~~~~-~~~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~~  409 (454)
                      |..|++...... .....  ....    ........|++.++|++.++....+.|.+|+- .++.+..+....    +..
T Consensus       201 I~~~d~~~~g~~~~~~~~~~~~~~----~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~  275 (319)
T d2dg1a1         201 LHRIALEDDGVTIQPFGATIPYYF----TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHML  275 (319)
T ss_dssp             EEEEEECTTSSSEEEEEEEEEEEC----CSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSC
T ss_pred             eEEEEEcCCCceeccccceeeecc----CCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCc
Confidence            999998643221 11110  0000    01122568999999998888888899999995 688887775421    233


Q ss_pred             eeeEEEEcCCCCEEEEEe
Q psy17902        410 VINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       410 ~v~~l~~s~d~~~l~~~~  427 (454)
                      .+++++|.|++..+++++
T Consensus       276 ~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         276 RSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             BCCEEEECTTSCEEEEEE
T ss_pred             eeeeEEEeCCCCEEEEEc
Confidence            578999999888887764

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=6.2e-07  Score=82.36  Aligned_cols=282  Identities=9%  Similarity=0.007  Sum_probs=152.8

Q ss_pred             CCeEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902        143 ASITCIAVTSDSKHVYSAC---------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN  213 (454)
Q Consensus       143 ~~V~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~  213 (454)
                      -.+....||||+++|+.+.         ..+.+.++|+.++........    ......+....|||+|+.||... ++.
T Consensus        61 ~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~----~~~~~~l~~~~wSPDG~~iafv~-~~n  135 (465)
T d1xfda1          61 LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPP----EVSNAKLQYAGWGPKGQQLIFIF-ENN  135 (465)
T ss_dssp             TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCT----TCCSCCCSBCCBCSSTTCEEEEE-TTE
T ss_pred             cccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCc----cCCccccceeeeccCCceEEEEe-cce
Confidence            3567888999999988764         357889999998765432221    12233466688999999998876 567


Q ss_pred             EEEEeC-CCccEEee-cccCCC-----------------eEEEEEcCCCCEEEEEeCC-Cc-------------------
Q psy17902        214 IKLWSS-SLEHLHTF-TGHKAP-----------------ITGLAISFECDTLYSSSND-RS-------------------  254 (454)
Q Consensus       214 v~vw~~-~~~~~~~~-~~~~~~-----------------v~~~~~~~~~~~l~~~~~d-g~-------------------  254 (454)
                      |.+.+. .+..++.. .+....                 -.++.|||||++|+....| ..                   
T Consensus       136 l~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~  215 (465)
T d1xfda1         136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP  215 (465)
T ss_dssp             EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred             EEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEecccccceeecccccccccceeee
Confidence            888887 33333222 122111                 2477899999999986532 22                   


Q ss_pred             --------------EEEEeCCCceeEEEee------ccCCceeEEEeecCCCEEEEeeC-C---CcEEEeeccCCeEEEE
Q psy17902        255 --------------IKVWNIEDRAYVETLF------GHQSAITSLDILAKNRVISSGGT-D---KSVRVWKIQEESQLVF  310 (454)
Q Consensus       255 --------------i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~-d---g~i~i~d~~~~~~~~~  310 (454)
                                    +.++|+.++.......      .....+..+.|+|++++++.... +   ..|.++|..++.....
T Consensus       216 ~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~  295 (465)
T d1xfda1         216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK  295 (465)
T ss_dssp             EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred             eeccccCCCCCceeEEEEecCCCcEEEEEeccCcCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEE
Confidence                          3344444332211110      11224677899998876655322 2   2578889988876632


Q ss_pred             c-cc-cCCe-----EEEEecCCCEE--EEEe-CCC--CEEEEecCC------CccceeeecccCCCCCCCCCCcEEEE-E
Q psy17902        311 N-GH-SRGI-----DMTRRVNDQQF--ITCG-EDG--TLSLWSILK------KVPTHTIPVAHGYDSSSSEPNWITSV-A  371 (454)
Q Consensus       311 ~-~~-~~~i-----~~~~~~~~~~l--~~~~-~dg--~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~-~  371 (454)
                      . .. ..-+     ...+.+++..+  +..+ .+|  .+..+.+..      +..+..+.  .       ..-.|..+ .
T Consensus       296 ~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT--~-------G~w~V~~i~~  366 (465)
T d1xfda1         296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSIT--S-------GDWDVTKILA  366 (465)
T ss_dssp             EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSC--C-------SSSCEEEEEE
T ss_pred             EEEcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEec--c-------CCceEEEEEE
Confidence            2 11 1111     22334445432  2222 222  344433321      11111111  1       11225554 6


Q ss_pred             EecCCCEE-EEecCC--CcEEEEEc--CCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCC--Cceeeeee
Q psy17902        372 CLHNSDLV-ASGSYD--GCVKLWKI--TPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTE--HRFGRWKT  438 (454)
Q Consensus       372 ~s~~~~~l-~~~~~d--g~v~iwd~--~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d--~~i~~W~~  438 (454)
                      |++.++.| +++..+  +.-++|.+  ..+.....+.. ........++.|||++++++..++.-  -.+.+++.
T Consensus       367 ~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~  441 (465)
T d1xfda1         367 YDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNT  441 (465)
T ss_dssp             EETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEET
T ss_pred             EcCCCCEEEEEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEEC
Confidence            88877754 344433  23345554  33322222221 12344578999999999998765432  23445544

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.89  E-value=3.6e-06  Score=72.11  Aligned_cols=223  Identities=5%  Similarity=-0.062  Sum_probs=142.0

Q ss_pred             EEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec--
Q psy17902        195 ALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG--  271 (454)
Q Consensus       195 ~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--  271 (454)
                      +..|.+. +.+..+=-..+.|..||..+.....+. ....+.++++.+++.++++ +.+| |.++|..+++.......  
T Consensus        22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~-~~~~~~~i~~~~dg~l~va-~~~g-l~~~d~~tg~~~~l~~~~~   98 (295)
T d2ghsa1          22 GPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIA-SDDG-LFLRDTATGVLTLHAELES   98 (295)
T ss_dssp             EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEE-ETTE-EEEEETTTCCEEEEECSST
T ss_pred             CCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEE-CCCCcEEEEEecCCCEEEE-EeCc-cEEeecccceeeEEeeeec
Confidence            4457764 444444445688999998665555443 4567889999988866654 5554 88999998875433221  


Q ss_pred             --cCCceeEEEeecCCCEEEEeeC----CCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCE-EEEEeCCCCEEEEecC
Q psy17902        272 --HQSAITSLDILAKNRVISSGGT----DKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQ-FITCGEDGTLSLWSIL  343 (454)
Q Consensus       272 --~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~-l~~~~~dg~i~iwd~~  343 (454)
                        ....++.+.+.|+|++.++...    .+.-.+|.+..++.............+.+ +++.. +++-+..+.|..|++.
T Consensus        99 ~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d  178 (295)
T d2ghsa1          99 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD  178 (295)
T ss_dssp             TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred             CCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEeecccceeeEeeec
Confidence              1235788999999987765432    23456677766665533333333334444 44554 4555677889988874


Q ss_pred             CCccc-----eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc-
Q psy17902        344 KKVPT-----HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT-  417 (454)
Q Consensus       344 ~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s-  417 (454)
                      .....     ..+....      ........+++..+|++.++.-..+.|..||- .++.+..+..  ....+++++|- 
T Consensus       179 ~~~~~~~~~~~~~~~~~------~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~l--P~~~~T~~~FGG  249 (295)
T d2ghsa1         179 ARTGLPTGKAEVFIDST------GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV--PGKQTTCPAFIG  249 (295)
T ss_dssp             TTTCCBSSCCEEEEECT------TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--SCSBEEEEEEES
T ss_pred             ccccccccceEEEeccC------cccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecC--CCCceEEEEEeC
Confidence            32111     1111111      12334788999999998877777788999994 6788888875  23468999995 


Q ss_pred             CCCCEEEEEecC
Q psy17902        418 SDHKHLVAGIGT  429 (454)
Q Consensus       418 ~d~~~l~~~~~~  429 (454)
                      ||.+.|++++..
T Consensus       250 ~d~~~LyvTta~  261 (295)
T d2ghsa1         250 PDASRLLVTSAR  261 (295)
T ss_dssp             TTSCEEEEEEBC
T ss_pred             CCCCEEEEEECC
Confidence            788888776444

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=1e-07  Score=87.71  Aligned_cols=139  Identities=11%  Similarity=0.053  Sum_probs=93.3

Q ss_pred             EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec---------CCCcEEEEeC
Q psy17902        149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD---------NNSNIKLWSS  219 (454)
Q Consensus       149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------~dg~v~vw~~  219 (454)
                      .|.+++.++.. ..+|.|.+||+.++.....+....   -..-.+....||||+++|+...         ..+.+.++|+
T Consensus        23 ~W~~~~~~~~~-~~~g~i~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~   98 (465)
T d1xfda1          23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKK---IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI   98 (465)
T ss_dssp             CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTT---TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred             EEeCCCcEEEE-eCCCcEEEEECCCCCEEEEEcCcc---ccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEc
Confidence            58888877654 557899999998876533222111   1223567788999999988763         3578899999


Q ss_pred             CCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCce-----------------eE
Q psy17902        220 SLEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAI-----------------TS  278 (454)
Q Consensus       220 ~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v-----------------~~  278 (454)
                      .......+.   .....+....|+|+|+.|+-.. ++.|.+.+..++..++... +....|                 .+
T Consensus        99 ~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a  177 (465)
T d1xfda1          99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA  177 (465)
T ss_dssp             SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred             cCCceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccce
Confidence            544444332   3344566789999999998876 5678898887766554332 111111                 46


Q ss_pred             EEeecCCCEEEEee
Q psy17902        279 LDILAKNRVISSGG  292 (454)
Q Consensus       279 ~~~~~~~~~l~~~~  292 (454)
                      +-|+|||++|+...
T Consensus       178 ~~WSPDgk~iaf~~  191 (465)
T d1xfda1         178 HWWSPDGTRLAYAA  191 (465)
T ss_dssp             EEECTTSSEEEEEE
T ss_pred             EEECCCCCeEEEEE
Confidence            78999999988764

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.79  E-value=7.9e-07  Score=75.68  Aligned_cols=232  Identities=6%  Similarity=-0.035  Sum_probs=130.3

Q ss_pred             EEeCC--CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEeCCCceeEEE
Q psy17902        197 AVANN--NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN-D-----RSIKVWNIEDRAYVET  268 (454)
Q Consensus       197 ~~~~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~  268 (454)
                      ..+|+  |+.+|..+ +|.|.+.|+.+.....+..+.+.+...+|||||+.|+.... +     ..|.+++..++.....
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~l   83 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI   83 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEe
Confidence            45788  88888765 46788889977777788778888999999999998886542 2     2488888888765533


Q ss_pred             ee------ccCCceeEEEeecCCCEEEEeeCC------CcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC-CC
Q psy17902        269 LF------GHQSAITSLDILAKNRVISSGGTD------KSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE-DG  335 (454)
Q Consensus       269 ~~------~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~-dg  335 (454)
                      ..      ..........|+|+++.|+.....      ..+...+.........  +.......+++++..++.... ..
T Consensus        84 t~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  161 (281)
T d1k32a2          84 TYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL--NLGPATHILFADGRRVIGRNTFEL  161 (281)
T ss_dssp             CCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC--CSCSCSEEEEETTEEEEEESCSCC
T ss_pred             eecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe--cCCccceeeecCCCeEEEeecccc
Confidence            21      122345678899999988765332      2344555555444322  222223344444443333221 11


Q ss_pred             -----------CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--CcEEEEEcCCCceeeEe
Q psy17902        336 -----------TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--GCVKLWKITPKRTLEFL  402 (454)
Q Consensus       336 -----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~  402 (454)
                                 ...++............          .........++++. ++.....+  ..|.++|+.++.. ..+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~-~~l  229 (281)
T d1k32a2         162 PHWKGYRGGTRGKIWIEVNSGAFKKIVD----------MSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDL-RKH  229 (281)
T ss_dssp             TTSTTCCSTTCCEEEEEEETTEEEEEEC----------CSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSC-EEC
T ss_pred             ceeeeeccCCcceeeeeccccceeeccC----------Cccccceeeeeccc-cceecccccccceEEEeCCCCce-EEe
Confidence                       01111111111111110          11113445555543 33333333  3577778776543 333


Q ss_pred             ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEE
Q psy17902        403 QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAI  448 (454)
Q Consensus       403 ~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~  448 (454)
                      ..  . .......|||||+.|+..  .++.|++++...+....|.+
T Consensus       230 t~--~-~~~~~~~~SpDG~~I~f~--~~~~l~~~d~~~g~~~~i~~  270 (281)
T d1k32a2         230 TS--F-TDYYPRHLNTDGRRILFS--KGGSIYIFNPDTEKIEKIEI  270 (281)
T ss_dssp             CC--C-CSSCEEEEEESSSCEEEE--ETTEEEEECTTTCCEEECCC
T ss_pred             ec--C-CCcccccCcCCCCEEEEE--eCCEEEEEECCCCCEEEecc
Confidence            32  1 122334699999999876  35778888877766555543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.74  E-value=3.2e-06  Score=71.75  Aligned_cols=228  Identities=8%  Similarity=0.017  Sum_probs=124.5

Q ss_pred             EEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-C-----CcEEEEeCC
Q psy17902        149 AVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-N-----SNIKLWSSS  220 (454)
Q Consensus       149 ~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~v~vw~~~  220 (454)
                      ..+|+  |+.+|..+ +|.|.+.|+.++......       .+...+...+|||||+.||.... +     ..|.+++..
T Consensus         5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt-------~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~   76 (281)
T d1k32a2           5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIV-------SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGE   76 (281)
T ss_dssp             CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEE-------CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETT
T ss_pred             ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEe-------cCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEec
Confidence            35788  99888765 467888899987764332       24557888999999999886532 1     236667775


Q ss_pred             CccEEeeccc-------CCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902        221 LEHLHTFTGH-------KAPITGLAISFECDTLYSSSND------RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV  287 (454)
Q Consensus       221 ~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~  287 (454)
                      +.....+..+       ........|+|+++.|+.....      ..+...+...+.....   +......+.+.+.+..
T Consensus        77 ~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~  153 (281)
T d1k32a2          77 NGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLGPATHILFADGRRV  153 (281)
T ss_dssp             TTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSCSCSEEEEETTEEE
T ss_pred             CCceEEeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCCccceeeecCCCeE
Confidence            5555544322       2345678899999988875432      2345555554443222   2233333333333344


Q ss_pred             EEEeeCCC-----------cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC--CCEEEEecCCCccceeeecc
Q psy17902        288 ISSGGTDK-----------SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED--GTLSLWSILKKVPTHTIPVA  354 (454)
Q Consensus       288 l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~  354 (454)
                      ++......           ...++........................+..+.....+  ..|.++|+..+.... +...
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~  232 (281)
T d1k32a2         154 IGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRK-HTSF  232 (281)
T ss_dssp             EEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEE-CCCC
T ss_pred             EEeeccccceeeeeccCCcceeeeeccccceeeccCCccccceeeeeccccceecccccccceEEEeCCCCceEE-eecC
Confidence            44332221           112222222222222222222233333333333333333  346667776554332 2111


Q ss_pred             cCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee
Q psy17902        355 HGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL  399 (454)
Q Consensus       355 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~  399 (454)
                      .        .  .....|+|+|+.|+.. .++.|+++|+.+++..
T Consensus       233 ~--------~--~~~~~~SpDG~~I~f~-~~~~l~~~d~~~g~~~  266 (281)
T d1k32a2         233 T--------D--YYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIE  266 (281)
T ss_dssp             C--------S--SCEEEEEESSSCEEEE-ETTEEEEECTTTCCEE
T ss_pred             C--------C--cccccCcCCCCEEEEE-eCCEEEEEECCCCCEE
Confidence            1        1  1224689999987654 4678999999887543

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.57  E-value=7.9e-05  Score=63.46  Aligned_cols=215  Identities=8%  Similarity=-0.017  Sum_probs=135.7

Q ss_pred             EEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE
Q psy17902        146 TCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHL  224 (454)
Q Consensus       146 ~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~  224 (454)
                      -+..|++.. .++.+--..+.|..||..++.... +.       ....+.++++.+++.+++++ .+ .+.++|.....+
T Consensus        21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~-~~-------~~~~~~~i~~~~dg~l~va~-~~-gl~~~d~~tg~~   90 (295)
T d2ghsa1          21 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-------LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVL   90 (295)
T ss_dssp             EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-------CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCE
T ss_pred             eCCeEECCCCEEEEEECCCCEEEEEECCCCeEEE-EE-------CCCCcEEEEEecCCCEEEEE-eC-ccEEeeccccee
Confidence            466788754 455554467899999998875432 22       22368899999999877764 34 588999855444


Q ss_pred             Eeecc-----cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEeeCC
Q psy17902        225 HTFTG-----HKAPITGLAISFECDTLYSSSN----DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGGTD  294 (454)
Q Consensus       225 ~~~~~-----~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d  294 (454)
                      ..+..     ....++.+.+.|+|++.++...    .+.-.+|.+..++....+. .-...+.++|+++++.+ ++-+..
T Consensus        91 ~~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~-~~~~~Ng~~~s~d~~~l~~~dt~~  169 (295)
T d2ghsa1          91 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKV  169 (295)
T ss_dssp             EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE-EESSEEEEEECTTSCEEEEEETTT
T ss_pred             eEEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee-ccCCcceeeecCCCceEEEeeccc
Confidence            44321     1235788999999987666432    2345566666666544443 23345789999999755 455567


Q ss_pred             CcEEEeeccCCe------EE---EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902        295 KSVRVWKIQEES------QL---VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP  364 (454)
Q Consensus       295 g~i~i~d~~~~~------~~---~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  364 (454)
                      +.|..|++....      ..   ...+.......+.. .++++.++.-..+.|..||. .++.+..+.....        
T Consensus       170 ~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~--------  240 (295)
T d2ghsa1         170 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK--------  240 (295)
T ss_dssp             CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS--------
T ss_pred             ceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCC--------
Confidence            888888875321      11   11222333344444 35566666557788999995 6778888776432        


Q ss_pred             CcEEEEEEe-cCCCEEEE
Q psy17902        365 NWITSVACL-HNSDLVAS  381 (454)
Q Consensus       365 ~~i~~~~~s-~~~~~l~~  381 (454)
                       .+++++|- ++.+.|++
T Consensus       241 -~~T~~~FGG~d~~~Lyv  257 (295)
T d2ghsa1         241 -QTTCPAFIGPDASRLLV  257 (295)
T ss_dssp             -BEEEEEEESTTSCEEEE
T ss_pred             -ceEEEEEeCCCCCEEEE
Confidence             28999996 56664443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.50  E-value=0.00018  Score=59.15  Aligned_cols=255  Identities=10%  Similarity=0.128  Sum_probs=156.6

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc-cEEeecccCCCeEEEEEcCC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE-HLHTFTGHKAPITGLAISFE  242 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~-~~~~~~~~~~~v~~~~~~~~  242 (454)
                      ..|.|.|+.+.......+.         ..-+.-.+|..+.||.-+ ...+.+||++.+ .+..+. ...+|.-=.|-.+
T Consensus        45 ~~VvIidl~n~~~~~Rrpi---------~AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~  113 (327)
T d1utca2          45 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL  113 (327)
T ss_dssp             EEEEEEETTSTTSCEEEEC---------CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEESSS
T ss_pred             ceEEEEECCCCCcceeccc---------chhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEE-cCCCcEEEEecCC
Confidence            5788999987654332221         223445678888887766 468999999544 444444 4456666677643


Q ss_pred             CCEEEEEeCCCcEEEEeCCCc-eeEEEeeccC----CceeEEEeecCCCEEEEee-------CCCcEEEeeccCCeEEEE
Q psy17902        243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQ----SAITSLDILAKNRVISSGG-------TDKSVRVWKIQEESQLVF  310 (454)
Q Consensus       243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~  310 (454)
                       +.|+..+ +..|+-|+++.. .+...+..|.    ..|..-..+++.++++..+       -.|.+.+|.........+
T Consensus       114 -~~L~lVT-~taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~sQ~i  191 (327)
T d1utca2         114 -NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI  191 (327)
T ss_dssp             -SEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE
T ss_pred             -CEEEEEc-CCceEEEcccCCCCchhhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCcCccc
Confidence             4566554 466999999543 3455554443    4566677778888776543       246788999998888888


Q ss_pred             ccccCCeEEEEecCC----CEEEEEe---CCCCEEEEecCCCc---cceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        311 NGHSRGIDMTRRVND----QQFITCG---EDGTLSLWSILKKV---PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       311 ~~~~~~i~~~~~~~~----~~l~~~~---~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      .+|......+..+..    ..|+.+.   ..+.++|.++....   +........-.-..........++..|+.-.++.
T Consensus       192 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiy  271 (327)
T d1utca2         192 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF  271 (327)
T ss_dssp             CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEE
T ss_pred             cceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEE
Confidence            888766555444322    1233222   34688888886532   1111110000111112345577899999888999


Q ss_pred             EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902        381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFG  434 (454)
Q Consensus       381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~  434 (454)
                      .-+.-|.|++||+.++.++..-+-  ...+|...+-..+..-+++- ...|.|.
T Consensus       272 viTK~G~i~lyDleTgt~i~~nRI--s~~~iF~~a~~~~~~Gi~~V-Nr~GqVl  322 (327)
T d1utca2         272 LITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGV-NRKGQVL  322 (327)
T ss_dssp             EEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTTTEEEEE-ETTSEEE
T ss_pred             EEecCcEEEEEEcccccEEEEeec--CCCceEEeccCCCCceEEEE-CCCCeEE
Confidence            999999999999999988876554  34455544444444444433 4666654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=98.35  E-value=0.00037  Score=61.69  Aligned_cols=276  Identities=11%  Similarity=0.054  Sum_probs=145.7

Q ss_pred             eEEEEEcCCCCEEEEEeCC-----C------eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-C
Q psy17902        145 ITCIAVTSDSKHVYSACKD-----G------IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-S  212 (454)
Q Consensus       145 V~~~~~s~~~~~l~~~~~d-----g------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g  212 (454)
                      +...+...+|++++.|+.+     +      .+.+||..++.-...... ..  .+.......++.+++.+++.|+.+ .
T Consensus        22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~-~~--~~~~~~~~~~~~~~g~i~v~Gg~~~~   98 (387)
T d1k3ia3          22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT-VT--KHDMFCPGISMDGNGQIVVTGGNDAK   98 (387)
T ss_dssp             SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE-EC--SCCCSSCEEEECTTSCEEEECSSSTT
T ss_pred             cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCC-CC--CcccceeEEEEecCCcEEEeecCCCc
Confidence            4445556688888888853     1      377899987654322111 11  122223456788999999998765 5


Q ss_pred             cEEEEeCCCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCceeEEEee---------ccCC-
Q psy17902        213 NIKLWSSSLEHLHTFTG--HKAPITGLAISFECDTLYSSSND------RSIKVWNIEDRAYVETLF---------GHQS-  274 (454)
Q Consensus       213 ~v~vw~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~---------~~~~-  274 (454)
                      .+.+||.....-.....  ....-.+++..+++++++.|+.+      ..+.+||..+.+....-.         .+.. 
T Consensus        99 ~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~  178 (387)
T d1k3ia3          99 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL  178 (387)
T ss_dssp             CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG
T ss_pred             ceeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccce
Confidence            89999984333222221  11122356677799999988753      368999998775432110         0000 


Q ss_pred             ----ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcc--c-----c---CCeEEEE-ecCCCEEEEEeCC-----
Q psy17902        275 ----AITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNG--H-----S---RGIDMTR-RVNDQQFITCGED-----  334 (454)
Q Consensus       275 ----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~-----~---~~i~~~~-~~~~~~l~~~~~d-----  334 (454)
                          .-..+...+++..++.++..+.+.+++..+........  .     .   .....+. ..++..++.|+..     
T Consensus       179 ~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~  258 (387)
T d1k3ia3         179 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS  258 (387)
T ss_dssp             GTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred             eeccceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCcccccccEEEeeccCCceEEEEeccCCCCC
Confidence                00112233566777777777777777777655432110  0     0   0111122 1245555665532     


Q ss_pred             ---CCEEEEecCCCccce-eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----------CcEEEEEcCCCcee
Q psy17902        335 ---GTLSLWSILKKVPTH-TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----------GCVKLWKITPKRTL  399 (454)
Q Consensus       335 ---g~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~v~iwd~~~~~~~  399 (454)
                         ....+.++....... .......    ......-.+....++++++++|+.+           .++.+||..+.+ .
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~r~~~~~~~~~dg~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~~~~-W  333 (387)
T d1k3ia3         259 DATTNAHIITLGEPGTSPNTVFASNG----LYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT-F  333 (387)
T ss_dssp             BCCCCEEEEECCSTTSCCEEEECTTC----CSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE-E
T ss_pred             cccceeecccccccccCCCceeeccc----cccccccceeeeccCCeEEEECCcccCccCCCCcEeceEEEEECCCCe-E
Confidence               123333332211111 1110000    0112223355566899999998853           147899987763 3


Q ss_pred             eEeccCCCceeee-EEEEcCCCCEEEEEec
Q psy17902        400 EFLQDIPLSGVIN-SLVFTSDHKHLVAGIG  428 (454)
Q Consensus       400 ~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~  428 (454)
                      ..+..++....-. ...+.+||+.|+.|++
T Consensus       334 ~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~  363 (387)
T d1k3ia3         334 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG  363 (387)
T ss_dssp             EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred             EECCCCCCcccceEEEEECCCCEEEEEeCC
Confidence            3333322222122 2446799999999853

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.22  E-value=0.0013  Score=57.06  Aligned_cols=263  Identities=10%  Similarity=0.071  Sum_probs=152.0

Q ss_pred             EEEEeCCCeEEEEEcCCCceecccCCcccCC------------------------------------CCCCceEEEEEeC
Q psy17902        157 VYSACKDGIIIKWLLETRSKVCSSPFVKTDR------------------------------------KSYPPILALAVAN  200 (454)
Q Consensus       157 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------------------------------------~~~~~v~~~~~~~  200 (454)
                      +.+|+..|.|+|+-+.+++.+..++......                                    +.. -=..+++..
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~-HHP~~S~Td   94 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDL-HHVHMSFTE   94 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCB-CCEEEEEET
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCc-CCCcccccC
Confidence            5577888899999888777665444321110                                    000 011455654


Q ss_pred             ---CCcEEEEec-CCCcEEEEeCC-CccEEeec-ccCCCeEEEEEcC--CCCEEEEEeCCC------------------c
Q psy17902        201 ---NNELVASGD-NNSNIKLWSSS-LEHLHTFT-GHKAPITGLAISF--ECDTLYSSSNDR------------------S  254 (454)
Q Consensus       201 ---~~~~l~~~~-~dg~v~vw~~~-~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg------------------~  254 (454)
                         ||++|++.. .++.|.+.|+. .+....+. .....+..+...+  +..+++.++.+.                  .
T Consensus        95 GtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~  174 (459)
T d1fwxa2          95 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  174 (459)
T ss_dssp             TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEE
T ss_pred             CccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceE
Confidence               788888776 47899999993 34323221 2344566666644  556777766532                  3


Q ss_pred             EEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC---------------cEEEeec-----------------
Q psy17902        255 IKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK---------------SVRVWKI-----------------  302 (454)
Q Consensus       255 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~i~d~-----------------  302 (454)
                      +.++|..+++....+.. .+....+.++++|+++++.+.+.               .+.+++.                 
T Consensus       175 ~t~ID~~tm~V~~QV~V-~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eing  253 (459)
T d1fwxa2         175 FTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  253 (459)
T ss_dssp             EEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEEecCCceEEEEeee-CCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCC
Confidence            67889988887766542 34567899999999998876542               1333433                 


Q ss_pred             ------cCC---eEE-EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCccc--------eeeecccCCCCCCCC
Q psy17902        303 ------QEE---SQL-VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKVPT--------HTIPVAHGYDSSSSE  363 (454)
Q Consensus       303 ------~~~---~~~-~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~--------~~~~~~~~~~~~~~~  363 (454)
                            +..   ..+ .+.....+-.+...+++.++++++ -+.++.|+|+......        ..+.....      .
T Consensus       254 V~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~e------l  327 (459)
T d1fwxa2         254 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE------L  327 (459)
T ss_dssp             EEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCB------C
T ss_pred             ceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEeecc------c
Confidence                  210   001 122222233445566777777655 7899999998642211        11110000      1


Q ss_pred             CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC----------ceeeEeccCCCcee---eeEEEEcCCCCEEEEEe
Q psy17902        364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPK----------RTLEFLQDIPLSGV---INSLVFTSDHKHLVAGI  427 (454)
Q Consensus       364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~~---v~~l~~s~d~~~l~~~~  427 (454)
                      .-.....+|+..|+...+---|..|.-|++...          ..+..+.-+...+.   ..+-...|||++|++..
T Consensus       328 glgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~n  404 (459)
T d1fwxa2         328 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS  404 (459)
T ss_dssp             CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred             CcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccCCcceeccccccCCCCCccCcCCcCCCCCCEEEEec
Confidence            111566788888866666678999999998532          23333332111121   11124579999999884

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=0.00097  Score=55.29  Aligned_cols=205  Identities=9%  Similarity=-0.002  Sum_probs=130.8

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEe
Q psy17902        141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWS  218 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~  218 (454)
                      +...|.+|+|.+..+.|+-+. ..+.|+..++..........      .....+.++++..-+..|+ +-...+.|.+.+
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~------~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~  107 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAK  107 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEE------eccccccEEEEeccCCeEEEeccCCCEEEEEe
Confidence            444588899998877776654 55788888887654433322      1234688999987555555 445567999999


Q ss_pred             CCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCC---CcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eC
Q psy17902        219 SSLEHLHTFT-GHKAPITGLAISFECDTLYSSSND---RSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GT  293 (454)
Q Consensus       219 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~  293 (454)
                      +++.....+. .....+..+++.|...+++.....   +.|..-++............-....+|++.+.++.|+.+ ..
T Consensus       108 ~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~  187 (263)
T d1npea_         108 MDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAG  187 (263)
T ss_dssp             TTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETT
T ss_pred             cCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceeeeeecccccceEEEeecCcEEEEEeCC
Confidence            9666544443 334678899999987777755432   235555665443333332333456899999887776555 45


Q ss_pred             CCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        294 DKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       294 dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .+.|...++...... ...+...+.. +....+..+++-...+.|...|..+++.+..+.
T Consensus       188 ~~~I~~~~~~g~~~~~v~~~~~~P~~-lav~~~~lYwtd~~~~~I~~~~~~~g~~~~~~~  246 (263)
T d1npea_         188 THRAECLNPAQPGRRKVLEGLQYPFA-VTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFH  246 (263)
T ss_dssp             TTEEEEEETTEEEEEEEEECCCSEEE-EEEETTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred             CCEEEEEECCCCCeEEEECCCCCcEE-EEEECCEEEEEECCCCEEEEEECCCCccceEEC
Confidence            678888888765544 3333333333 333344455555577889999998887766553

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=98.13  E-value=0.0014  Score=61.09  Aligned_cols=261  Identities=8%  Similarity=-0.015  Sum_probs=146.3

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-----CCCcEEEEeC-CCccEEeec
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-----NNSNIKLWSS-SLEHLHTFT  228 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~dg~v~vw~~-~~~~~~~~~  228 (454)
                      ..|+.++.||.+.-.|..+++...........  ....++.--.-.++..++.++     ..|.|+-+|+ +++.+..+.
T Consensus       116 ~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~--~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~  193 (571)
T d2ad6a1         116 GQIVKKQANGHLLALDAKTGKINWEVEVCDPK--VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF  193 (571)
T ss_dssp             TEEEEECTTSEEEEEETTTCCEEEEEECCCGG--GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred             CeEEEEeCCCcEEeeehhhhhhhccccccccc--cccceeecCeEeCCeEEEeeccccccccCcEEEEECCCCcEEEEEe
Confidence            46777888999999999999876554321110  001111111111343333322     3678999998 777776543


Q ss_pred             ccC-------------------------------------CCe-EEEEEcCCCCEEEEEeC----------------CCc
Q psy17902        229 GHK-------------------------------------API-TGLAISFECDTLYSSSN----------------DRS  254 (454)
Q Consensus       229 ~~~-------------------------------------~~v-~~~~~~~~~~~l~~~~~----------------dg~  254 (454)
                      ...                                     ..+ ...++.+....++.+..                ...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~s  273 (571)
T d2ad6a1         194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT  273 (571)
T ss_dssp             SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred             ccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccc
Confidence            211                                     111 23455666666665543                245


Q ss_pred             EEEEeCCCceeEEEeeccCCce---------eEEEeecCCC---EEEEeeCCCcEEEeeccCCeEEEEc-cc--c-----
Q psy17902        255 IKVWNIEDRAYVETLFGHQSAI---------TSLDILAKNR---VISSGGTDKSVRVWKIQEESQLVFN-GH--S-----  314 (454)
Q Consensus       255 i~iwd~~~~~~~~~~~~~~~~v---------~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~-~~--~-----  314 (454)
                      +...|+++++.+..+..+...+         ....+..++.   .++.++.+|.++++|..+++.+... ..  .     
T Consensus       274 vvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~~~  353 (571)
T d2ad6a1         274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK  353 (571)
T ss_dssp             EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred             eeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecCCCcEeeeeccCCccccccc
Confidence            7788999999887776432222         1222223443   5677888999999999888765210 00  0     


Q ss_pred             ------------------------------CCe---EEEEecCCCEEEEEeC----------------------------
Q psy17902        315 ------------------------------RGI---DMTRRVNDQQFITCGE----------------------------  333 (454)
Q Consensus       315 ------------------------------~~i---~~~~~~~~~~l~~~~~----------------------------  333 (454)
                                                    +..   .....+....+++...                            
T Consensus       354 ~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  433 (571)
T d2ad6a1         354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP  433 (571)
T ss_dssp             ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred             ccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccccccccCCccccccceeecc
Confidence                                          000   0111112222322221                            


Q ss_pred             ---------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902        334 ---------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       334 ---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~  404 (454)
                               .|.|.-+|+.+++.+.+........     ..     .++..+.++++|+.||.++.+|..+|+.+-.+..
T Consensus       434 ~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~-----~g-----~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l  503 (571)
T d2ad6a1         434 GPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAW-----GG-----TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM  503 (571)
T ss_dssp             CTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCC-----SB-----CEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             ccCCcccCCcccEEEeccCCCceeeEcCCCCCCC-----cc-----eeEecCCEEEEECCCCeEEEEECCCCcEEEEEEC
Confidence                     2457777777777777665432210     11     1222466888899999999999999999877764


Q ss_pred             CCCceeeeEEEEcCCCC-EEEEEec
Q psy17902        405 IPLSGVINSLVFTSDHK-HLVAGIG  428 (454)
Q Consensus       405 ~~~~~~v~~l~~s~d~~-~l~~~~~  428 (454)
                      . ....-.-+.|..||+ ||++.+|
T Consensus       504 ~-~~~~a~P~ty~~dGkqYi~v~~g  527 (571)
T d2ad6a1         504 P-SGGIGSPMTYSFKGKQYIGSMYG  527 (571)
T ss_dssp             S-SCCCSCCEEEEETTEEEEEEEEC
T ss_pred             C-CCceecceEEEECCEEEEEEEec
Confidence            2 222222366777886 5655544

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.08  E-value=0.0012  Score=61.79  Aligned_cols=262  Identities=10%  Similarity=0.020  Sum_probs=147.6

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecC------CCcEEEEeC-CCccEE
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDN------NSNIKLWSS-SLEHLH  225 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~~~  225 (454)
                      ..+|+.++.|+.|.-.|..+++....+........  ..++. -.+. ++ .+++|..      .|.|+-+|. +++.+.
T Consensus       121 ~~~v~~~t~dg~l~Alda~tG~~~w~~~~~d~~~~--~~~t~~P~v~-~~-~vivg~~~~e~~~~G~v~A~Da~TG~~~W  196 (596)
T d1w6sa_         121 PALILKTQLDGNVAALNAETGETVWKVENSDIKVG--STLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVW  196 (596)
T ss_dssp             CCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT--CBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEE
T ss_pred             ceEEEEEeCCCCeEeeccccCceeccccccccccc--cccccCCcEE-CC-eEEEeeccccccccCceEEEECCCCcEEE
Confidence            34788889999999999999988766532111000  01110 0111 23 4555542      488999999 777776


Q ss_pred             eecccC-------------------------------------C-CeEEEEEcCCCCEEEEEeCC---------------
Q psy17902        226 TFTGHK-------------------------------------A-PITGLAISFECDTLYSSSND---------------  252 (454)
Q Consensus       226 ~~~~~~-------------------------------------~-~v~~~~~~~~~~~l~~~~~d---------------  252 (454)
                      .+....                                     . .-..+++.+...+++.+..+               
T Consensus       197 ~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~y  276 (596)
T d1w6sa_         197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW  276 (596)
T ss_dssp             EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred             EeeccCCccccccccccccccccccccccccccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccc
Confidence            653211                                     0 11234556666666665432               


Q ss_pred             -CcEEEEeCCCceeEEEeeccCC---------ceeEEEe-ecCC---CEEEEeeCCCcEEEeeccCCeEEEEccccC---
Q psy17902        253 -RSIKVWNIEDRAYVETLFGHQS---------AITSLDI-LAKN---RVISSGGTDKSVRVWKIQEESQLVFNGHSR---  315 (454)
Q Consensus       253 -g~i~iwd~~~~~~~~~~~~~~~---------~v~~~~~-~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---  315 (454)
                       ..|...|+.+++.+..++....         ....+.. ..++   ..++.+..+|.++++|..+++.+.......   
T Consensus       277 s~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~  356 (596)
T d1w6sa_         277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN  356 (596)
T ss_dssp             SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred             cccccccccccccccccccceeccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeecccccccc
Confidence             3477889999998876653221         1111221 2233   467778889999999999888762211000   


Q ss_pred             C-----------------------eEE---------------EEecCCCEEEEEeC------------------------
Q psy17902        316 G-----------------------IDM---------------TRRVNDQQFITCGE------------------------  333 (454)
Q Consensus       316 ~-----------------------i~~---------------~~~~~~~~l~~~~~------------------------  333 (454)
                      .                       ...               ...+...+++....                        
T Consensus       357 ~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~  436 (596)
T d1w6sa_         357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATL  436 (596)
T ss_dssp             SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred             ccccccccccccccCccccccCCccceeEecccccccccCccccCCCCceEEeccccccccccccccccccccccccccc
Confidence            0                       000               01111122222111                        


Q ss_pred             ---------------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902        334 ---------------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT  398 (454)
Q Consensus       334 ---------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~  398 (454)
                                     -|.|.-||+.+++...........          .+=.++..|.++++|+.||.++.+|..+|+.
T Consensus       437 ~~~~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~~~~~~----------~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~  506 (596)
T d1w6sa_         437 NMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAV----------WGGTMATAGDLVFYGTLDGYLKARDSDTGDL  506 (596)
T ss_dssp             EEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCC----------CSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred             ccccCcccCcccCCCcceEEEEeCCCCceecccCCCCCC----------ccceeEecCCEEEEECCCCeEEEEECCCCcE
Confidence                           145777777777776665433211          1111233577888999999999999999999


Q ss_pred             eeEeccCCCceeeeEEEEcCCCC-EEEEEecCC
Q psy17902        399 LEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTE  430 (454)
Q Consensus       399 ~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d  430 (454)
                      +-.+... ....-.-+.|..||+ ||++.+|..
T Consensus       507 LW~~~~~-~~~~a~P~tY~~dGkQYvav~~G~g  538 (596)
T d1w6sa_         507 LWKFKIP-SGAIGYPMTYTHKGTQYVAIYYGVG  538 (596)
T ss_dssp             EEEEECS-SCCCSCCEEEEETTEEEEEEEECCC
T ss_pred             eeEEECC-CCcccCCeEEEECCEEEEEEEecCC
Confidence            8777642 122222355666886 566654543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=98.07  E-value=0.0029  Score=58.74  Aligned_cols=264  Identities=14%  Similarity=0.116  Sum_probs=148.3

Q ss_pred             CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------CCCcEEEEeC-CCccEEe
Q psy17902        154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------NNSNIKLWSS-SLEHLHT  226 (454)
Q Consensus       154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~dg~v~vw~~-~~~~~~~  226 (454)
                      +..++.++.+|.|.-.|..+++.+............  .+...-.-.++ .++.+.      ..|.|.-+|. +++.+..
T Consensus       117 ~~~v~~~~~~g~l~Alda~tG~~~w~~~~~~~~~~~--~~~~~p~v~~~-~vivg~~~~~~~~~G~v~a~D~~TG~~~W~  193 (560)
T d1kv9a2         117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPY--SITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWR  193 (560)
T ss_dssp             BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSC--BCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred             CCeEEEEeCCCEEEEEECCCCcEEeccCccCcccce--eeeeeeeeecC-cccccccceeccccceEEEEECCCceEEee
Confidence            346788888999999999888877654321111111  01000000123 333332      2367899998 7777766


Q ss_pred             eccc------------------------------CCCe-EEEEEcCCCCEEEEEeC-------------------CCcEE
Q psy17902        227 FTGH------------------------------KAPI-TGLAISFECDTLYSSSN-------------------DRSIK  256 (454)
Q Consensus       227 ~~~~------------------------------~~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~  256 (454)
                      +..-                              ...+ ..+++.+...+++.+..                   ...|.
T Consensus       194 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~~~~~g~n~~s~siv  273 (560)
T d1kv9a2         194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL  273 (560)
T ss_dssp             EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred             eeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccccccccCCccccceeeE
Confidence            5321                              1111 23456666666655431                   23577


Q ss_pred             EEeCCCceeEEEeeccCCcee---------EEEeecCC---CEEEEeeCCCcEEEeeccCCeEEEEc--cccC-------
Q psy17902        257 VWNIEDRAYVETLFGHQSAIT---------SLDILAKN---RVISSGGTDKSVRVWKIQEESQLVFN--GHSR-------  315 (454)
Q Consensus       257 iwd~~~~~~~~~~~~~~~~v~---------~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~-------  315 (454)
                      -.|+.+++....++.....+.         -+.+..++   ..++.+..+|.++++|..+++.+...  ....       
T Consensus       274 Ald~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i~~~~~~~~~~~~~~d~  353 (560)
T d1kv9a2         274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL  353 (560)
T ss_dssp             EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred             EecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCcccccccccccccccccCh
Confidence            789999988766654322221         12222344   36777889999999999988876211  0000       


Q ss_pred             ----------------Ce-------------EEEEecCCCEEEEEeC---------------------------------
Q psy17902        316 ----------------GI-------------DMTRRVNDQQFITCGE---------------------------------  333 (454)
Q Consensus       316 ----------------~i-------------~~~~~~~~~~l~~~~~---------------------------------  333 (454)
                                      .+             .....+....+++...                                 
T Consensus       354 ~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  433 (560)
T d1kv9a2         354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA  433 (560)
T ss_dssp             TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred             hhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeeccccccccccccccccCcccccCCCC
Confidence                            00             0111122223332221                                 


Q ss_pred             ---CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902        334 ---DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV  410 (454)
Q Consensus       334 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  410 (454)
                         .|.|.-||+.+++.+..++.....          .+-.++-.+.++++|+.||.++.+|..+|+.+-.+... ....
T Consensus       434 ~~~~G~l~A~D~~tGk~~W~~~~~~~~----------~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~-~~~~  502 (560)
T d1kv9a2         434 AVVSGALLAWDPVKQKAAWKVPYPTHW----------NGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ-SGIV  502 (560)
T ss_dssp             GGCEEEEEEEETTTTEEEEEEEESSSC----------CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-SCCC
T ss_pred             cccccceEEEeCCCCeEeeeccCCCCC----------CCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECC-CCcc
Confidence               245777888888888777654321          11122335678889999999999999999998777642 1222


Q ss_pred             eeEEEEcCCCC-EEEEEecCCC
Q psy17902        411 INSLVFTSDHK-HLVAGIGTEH  431 (454)
Q Consensus       411 v~~l~~s~d~~-~l~~~~~~d~  431 (454)
                      -.-+.|..+|+ ||++.+|..+
T Consensus       503 ~~P~ty~~dGkqyv~v~aG~g~  524 (560)
T d1kv9a2         503 AAPMTFELAGRQYVAIMAGWGG  524 (560)
T ss_dssp             SCCEEEEETTEEEEEEEECCCS
T ss_pred             ccCEEEEECCEEEEEEEeCCCc
Confidence            22356667885 6666655443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.99  E-value=0.00033  Score=60.92  Aligned_cols=181  Identities=13%  Similarity=0.110  Sum_probs=115.3

Q ss_pred             EEEEeCCCcEEEEeCCCceeEEEeecc----------C-----------------------------Cce--eEEEeec-
Q psy17902        246 LYSSSNDRSIKVWNIEDRAYVETLFGH----------Q-----------------------------SAI--TSLDILA-  283 (454)
Q Consensus       246 l~~~~~dg~i~iwd~~~~~~~~~~~~~----------~-----------------------------~~v--~~~~~~~-  283 (454)
                      |.+|+..|.|+|+-+.+++.+..+...          .                             +..  ..+++.. 
T Consensus        16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG   95 (459)
T d1fwxa2          16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG   95 (459)
T ss_dssp             EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred             EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence            667888999999988877665544200          0                             011  2345543 


Q ss_pred             --CCCEEEEee-CCCcEEEeeccCCeEEE--EccccCCeEEEEe---cCCCEEEEEeCC------------------CCE
Q psy17902        284 --KNRVISSGG-TDKSVRVWKIQEESQLV--FNGHSRGIDMTRR---VNDQQFITCGED------------------GTL  337 (454)
Q Consensus       284 --~~~~l~~~~-~dg~i~i~d~~~~~~~~--~~~~~~~i~~~~~---~~~~~l~~~~~d------------------g~i  337 (454)
                        ||++|++.. .+..|.+.|+++.+...  .......+..+..   ++..+++.++..                  +.+
T Consensus        96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~  175 (459)
T d1fwxa2          96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF  175 (459)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred             ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence              677877655 67889999999888752  3333444444332   345566665542                  236


Q ss_pred             EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--------------------------------
Q psy17902        338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--------------------------------  385 (454)
Q Consensus       338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------------------------------  385 (454)
                      .++|..+.+....+.....          +..+.++++|+++++.+.+                                
T Consensus       176 t~ID~~tm~V~~QV~V~g~----------ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~  245 (459)
T d1fwxa2         176 TAVDADKWEVAWQVLVSGN----------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA  245 (459)
T ss_dssp             EEEETTTTEEEEEEEESSC----------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred             EEEecCCceEEEEeeeCCC----------hhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhc
Confidence            7788888888777765432          5678999999998887654                                


Q ss_pred             ------CcEEEEEcCCC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902        386 ------GCVKLWKITPK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI  439 (454)
Q Consensus       386 ------g~v~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~  439 (454)
                            +.+.+-|....   ..+..+   +.......+.++|||+++++++..+..+-+.++.
T Consensus       246 Gk~~eingV~VVD~~~~~~~~v~~yI---PVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         246 GDYQELNGVKVVDGRKEASSLFTRYI---PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             TCSEEETTEEEEECSGG--CSSEEEE---EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             CCcEEeCCceeecccccCCcceeEEE---ecCCCCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence                  12333333221   111112   1233466789999999999998889999888864

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=97.91  E-value=0.0033  Score=55.25  Aligned_cols=233  Identities=9%  Similarity=0.069  Sum_probs=123.6

Q ss_pred             EEEEEeCCCcEEEEecCCC-----------cEEEEeCCCcc---EEe-ecccCCCeEEEEEcCCCCEEEEEeCC-CcEEE
Q psy17902        194 LALAVANNNELVASGDNNS-----------NIKLWSSSLEH---LHT-FTGHKAPITGLAISFECDTLYSSSND-RSIKV  257 (454)
Q Consensus       194 ~~~~~~~~~~~l~~~~~dg-----------~v~vw~~~~~~---~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~i  257 (454)
                      ...+...+|++++.|+.+.           .+.+||.....   ... ...|.....+.++.+++.+++.|+.+ ..+.+
T Consensus        23 ~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~  102 (387)
T d1k3ia3          23 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL  102 (387)
T ss_dssp             EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred             EEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeE
Confidence            3344455778777776421           36789983221   111 12233334466788999999988765 58999


Q ss_pred             EeCCCceeEEEeec-cCCceeEEEeecCCCEEEEeeCC------CcEEEeeccCCeEEEEcccc----------------
Q psy17902        258 WNIEDRAYVETLFG-HQSAITSLDILAKNRVISSGGTD------KSVRVWKIQEESQLVFNGHS----------------  314 (454)
Q Consensus       258 wd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~----------------  314 (454)
                      ||..+......-.. ....-.+.+..+++++++.|+.+      ..+.+||..+..-.......                
T Consensus       103 yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~  182 (387)
T d1k3ia3         103 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD  182 (387)
T ss_dssp             EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred             ecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCCCCceeecCCCcccccccccccceeecc
Confidence            99987765322111 11222456667789998888753      36899999887654332110                


Q ss_pred             CCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE-ecCCCEEEEecCCC-------
Q psy17902        315 RGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC-LHNSDLVASGSYDG-------  386 (454)
Q Consensus       315 ~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg-------  386 (454)
                      .........++..++.+...+.+.+++..+................. ....-.++.+ ..++++++.|+...       
T Consensus       183 ~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~  261 (387)
T d1k3ia3         183 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAP-DAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT  261 (387)
T ss_dssp             CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECC-CCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred             ceeEEEEeCCCCEEEecCcCCcEEecCcccCcEeeccccccCcccCc-ccccccEEEeeccCCceEEEEeccCCCCCccc
Confidence            11122333456666667677777777776654332221111110000 0111122333 23666777776421       


Q ss_pred             -cEEEEEcCCC----ceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902        387 -CVKLWKITPK----RTLEFLQDIPLSGVINSLVFTSDHKHLVAGI  427 (454)
Q Consensus       387 -~v~iwd~~~~----~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~  427 (454)
                       ...+.++...    .....+..++....-.+.+..+||+.+++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~dg~i~v~GG  307 (387)
T d1k3ia3         262 TNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG  307 (387)
T ss_dssp             CCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred             ceeecccccccccCCCceeeccccccccccceeeeccCCeEEEECC
Confidence             2344443322    1222222222333344566778999888873

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.90  E-value=0.0069  Score=56.39  Aligned_cols=107  Identities=14%  Similarity=0.099  Sum_probs=69.0

Q ss_pred             CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902        335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSL  414 (454)
Q Consensus       335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l  414 (454)
                      |.|.-+|+.+++.....+.....          ..-..+..+.++++|+.||.++.+|..+|+.+-.+... ....-.-+
T Consensus       466 G~l~AiD~~TG~i~W~~~~~~p~----------~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~-~~~~~~P~  534 (582)
T d1flga_         466 GSLRAMDPVSGKVVWEHKEHLPL----------WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG-SGIVSPPI  534 (582)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCC----------CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCE
T ss_pred             CeEEEEcCCCCcEEeecCCCCCC----------ccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECC-CCccccCE
Confidence            56777888888887777654321          11113346778889999999999999999999777642 22222236


Q ss_pred             EEcCCCC-EEEEEecCCCceeeee-------eeCCCeeEEEEEEee
Q psy17902        415 VFTSDHK-HLVAGIGTEHRFGRWK-------TIKGVKNTVAIIDIQ  452 (454)
Q Consensus       415 ~~s~d~~-~l~~~~~~d~~i~~W~-------~~~~~~~~~~~~~~~  452 (454)
                      .|..+|+ |+++.+|..+.+..|-       .....-+.|.++.|+
T Consensus       535 ty~~~G~qYv~i~ag~g~~~~~~~g~~~~~~~~~~~g~~l~vF~Lp  580 (582)
T d1flga_         535 TWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLP  580 (582)
T ss_dssp             EEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECC
T ss_pred             EEEECCEEEEEEEeCCCCccccccccccccccccCCCCEEEEEeCC
Confidence            7778885 6766656666655443       112233677777664

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.90  E-value=0.004  Score=51.11  Aligned_cols=223  Identities=11%  Similarity=0.127  Sum_probs=140.5

Q ss_pred             EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccE
Q psy17902        147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SLEHL  224 (454)
Q Consensus       147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~  224 (454)
                      +.-.+|..+.||.-+ ..++.++|+++...+....+       ..+|.--.|-.+. .|+..+ +..|+-|++  ...+.
T Consensus        67 sAIMhP~~~IiALra-g~~LQiFnletK~klks~~~-------~e~VvfWkWis~~-~L~lVT-~taVYHW~~~g~s~P~  136 (327)
T d1utca2          67 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPV  136 (327)
T ss_dssp             EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-------SSCCCEEEESSSS-EEEEEC-SSEEEEEESSSSCCCE
T ss_pred             hhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEc-------CCCcEEEEecCCC-EEEEEc-CCceEEEcccCCCCch
Confidence            455789999888876 46899999999988877653       3356666676554 444444 367999999  44566


Q ss_pred             EeecccC----CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC---CEEEE
Q psy17902        225 HTFTGHK----APITGLAISFECDTLYSSS-------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN---RVISS  290 (454)
Q Consensus       225 ~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~  290 (454)
                      +.+..|.    ..|..-..+++.+.++..+       -.|.+.+|..+.+. -+.+.+|......+.+..+.   .+++.
T Consensus       137 k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~f  215 (327)
T d1utca2         137 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF  215 (327)
T ss_dssp             EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred             hhhhhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc-CccccceeeeeEEEEcCCCCCCceEEEE
Confidence            6665554    3566667788888766543       24678899988543 45677776665555443221   23332


Q ss_pred             e---eCCCcEEEeeccCCeE---------E--EEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        291 G---GTDKSVRVWKIQEESQ---------L--VFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       291 ~---~~dg~i~i~d~~~~~~---------~--~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      +   ...+.++|.++.....         .  .+..   ..-++.+-.+..-+.+...+.-|.|++||+.++.++..-..
T Consensus       216 a~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRI  295 (327)
T d1utca2         216 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI  295 (327)
T ss_dssp             EEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred             EECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeec
Confidence            2   2235788888765211         1  1111   12245555566678888999999999999999998887665


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEE
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVK  389 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~  389 (454)
                      ...         .|...+-+....=+++...+|.|.
T Consensus       296 s~~---------~iF~~a~~~~~~Gi~~VNr~GqVl  322 (327)
T d1utca2         296 SGE---------TIFVTAPHEATAGIIGVNRKGQVL  322 (327)
T ss_dssp             CSS---------CEEEEEEETTTTEEEEEETTSEEE
T ss_pred             CCC---------ceEEeccCCCCceEEEECCCCeEE
Confidence            332         144444444433344444556554

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.86  E-value=0.0023  Score=59.56  Aligned_cols=106  Identities=13%  Similarity=0.134  Sum_probs=60.9

Q ss_pred             CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEE
Q psy17902        336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV  415 (454)
Q Consensus       336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~  415 (454)
                      .|.-||+.+++.+...+.....          ..=..+-.+.+|++|+.||.++.||..+|+.+-.+.... ...-.-+.
T Consensus       458 ~l~AiD~~tGk~~W~~~~~~p~----------~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~-~~~~~P~t  526 (573)
T d1kb0a2         458 RLLAWDPVAQKAAWSVEHVSPW----------NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT-GVVAAPST  526 (573)
T ss_dssp             EEEEEETTTTEEEEEEEESSSC----------CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEE
T ss_pred             cEEEeCCCCCceEeeecCCCCC----------CCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEEECCC-CccccCEE
Confidence            4566677777666665543211          011123367788899999999999999999987776421 11111255


Q ss_pred             EcCCCC-EEEEEecCCCceeee--eeeCCCeeEEEEEEee
Q psy17902        416 FTSDHK-HLVAGIGTEHRFGRW--KTIKGVKNTVAIIDIQ  452 (454)
Q Consensus       416 ~s~d~~-~l~~~~~~d~~i~~W--~~~~~~~~~~~~~~~~  452 (454)
                      |..||+ ||++.+|..+...+.  ......-+.+.+|.|.
T Consensus       527 y~~~GkQYv~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~  566 (573)
T d1kb0a2         527 YMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG  566 (573)
T ss_dssp             EEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred             EEECCEEEEEEEeCCCcccccccccccCCCCCEEEEEEeC
Confidence            666886 666665543332221  1122223456666654

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.79  E-value=0.0063  Score=50.14  Aligned_cols=251  Identities=10%  Similarity=0.014  Sum_probs=142.4

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCCccEEee-cccCC
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSLEHLHTF-TGHKA  232 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~~~~~~~-~~~~~  232 (454)
                      .+|+.+.. +.|+-.+++.......... .....+...+.+++|.+..+.|+... ..+.|...++++.....+ .....
T Consensus         2 ~fLl~s~~-~~I~~~~ld~~~~~~~~~~-~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~   79 (263)
T d1npea_           2 THLLFAQT-GKIERLPLERNTMKKTEAK-AFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG   79 (263)
T ss_dssp             EEEEEEEE-EEEEEEEESSSCBCGGGCE-EEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred             CEEEEeCC-CeEEEEECCCccccccccc-cccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccc
Confidence            34554443 5777777765432221110 00011233577899998777776654 457788888855544443 33345


Q ss_pred             CeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC-Cc--EEEeeccCCeEE
Q psy17902        233 PITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD-KS--VRVWKIQEESQL  308 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~--i~i~d~~~~~~~  308 (454)
                      .+.++++..-+..|+.+ ...+.|.+.++........+......+..++++|...+|+..... +.  |..-++......
T Consensus        80 ~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~  159 (263)
T d1npea_          80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR  159 (263)
T ss_dssp             CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred             cccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCce
Confidence            78899998766666544 456789999988655433333334568899999988777654322 23  444455544333


Q ss_pred             EE-ccc-cCCeEEEEecCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902        309 VF-NGH-SRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD  385 (454)
Q Consensus       309 ~~-~~~-~~~i~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d  385 (454)
                      .+ ... ..+......+.++.|. +-...+.|...++........+.. .         ....+|++. ++.+..+-...
T Consensus       160 ~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~-~---------~~P~~lav~-~~~lYwtd~~~  228 (263)
T d1npea_         160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-L---------QYPFAVTSY-GKNLYYTDWKT  228 (263)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-C---------CSEEEEEEE-TTEEEEEETTT
T ss_pred             eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECC-C---------CCcEEEEEE-CCEEEEEECCC
Confidence            22 222 2222333334555554 445678888888865443322221 1         114577775 34444554567


Q ss_pred             CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902        386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD  419 (454)
Q Consensus       386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d  419 (454)
                      +.|...|..+++.+..+... ......++.+.++
T Consensus       229 ~~I~~~~~~~g~~~~~~~~~-~~~~~~gi~v~~~  261 (263)
T d1npea_         229 NSVIAMDLAISKEMDTFHPH-KQTRLYGITIALS  261 (263)
T ss_dssp             TEEEEEETTTTEEEEEECCS-SCCCCCCEEEECS
T ss_pred             CEEEEEECCCCccceEECCC-CCCCcceEEEeCC
Confidence            88999999888777665432 2234556665543

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.78  E-value=0.0047  Score=57.60  Aligned_cols=194  Identities=7%  Similarity=0.000  Sum_probs=107.2

Q ss_pred             EEeCCCeEEEEEc-CCCceecccCCcccC-----CCCCCceEEEEEeCC----CcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902        159 SACKDGIIIKWLL-ETRSKVCSSPFVKTD-----RKSYPPILALAVANN----NELVASGDNNSNIKLWSS-SLEHLHTF  227 (454)
Q Consensus       159 ~~~~dg~i~iwd~-~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~----~~~l~~~~~dg~v~vw~~-~~~~~~~~  227 (454)
                      +++..+.+...|. .+++.+..+......     ......-..+++.++    ..+|+.++.|+.|.-.|. +++.+..+
T Consensus        68 ~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG~~~w~~  147 (596)
T d1w6sa_          68 HTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKV  147 (596)
T ss_dssp             ECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             eeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccCceeccc
Confidence            3344566666665 466666554321100     000001123444432    346888888999999998 77777665


Q ss_pred             cccCCCe-EEEEEcC--CCCEEEEEeC------CCcEEEEeCCCceeEEEeeccC-------------------------
Q psy17902        228 TGHKAPI-TGLAISF--ECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQ-------------------------  273 (454)
Q Consensus       228 ~~~~~~v-~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~-------------------------  273 (454)
                      ....... ..+.-.|  -+..+++++.      .|.|+-+|+.+|+.+..+....                         
T Consensus       148 ~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~  227 (596)
T d1w6sa_         148 ENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGT  227 (596)
T ss_dssp             ECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHH
T ss_pred             cccccccccccccCCcEECCeEEEeeccccccccCceEEEECCCCcEEEEeeccCCcccccccccccccccccccccccc
Confidence            4211000 0011111  1345666543      4889999999999987764211                         


Q ss_pred             ------------C-ceeEEEeecCCCEEEEeeC----------------CCcEEEeeccCCeEE-EEcccc---------
Q psy17902        274 ------------S-AITSLDILAKNRVISSGGT----------------DKSVRVWKIQEESQL-VFNGHS---------  314 (454)
Q Consensus       274 ------------~-~v~~~~~~~~~~~l~~~~~----------------dg~i~i~d~~~~~~~-~~~~~~---------  314 (454)
                                  . .-..+++.+...+++.+..                ...|.-.|+.+++.. .+....         
T Consensus       228 ~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~~~~D~Wd~d~~  307 (596)
T d1w6sa_         228 GTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGV  307 (596)
T ss_dssp             HTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCC
T ss_pred             ccCCCCceecCCCccccccccccCCCeeecccccccccccccccccccccccccccccccccccccccceeccccCCccc
Confidence                        0 1123456666666655533                234777888888877 332211         


Q ss_pred             CCeEEEEe--cCC---CEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        315 RGIDMTRR--VND---QQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       315 ~~i~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .....+..  .++   ..++....+|.+.++|..+++.+...+
T Consensus       308 ~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~  350 (596)
T d1w6sa_         308 NVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK  350 (596)
T ss_dssp             CCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             cceeeeeccccccccccceeccccccceeeecCCCCceeeecc
Confidence            11122222  233   256778899999999999998775443

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.72  E-value=0.0061  Score=56.58  Aligned_cols=213  Identities=9%  Similarity=-0.067  Sum_probs=124.4

Q ss_pred             CCeEEEEEcCCCceecccCCcccC-------------------------------CCCCCce-EEEEEeCCCcEEEEecC
Q psy17902        163 DGIIIKWLLETRSKVCSSPFVKTD-------------------------------RKSYPPI-LALAVANNNELVASGDN  210 (454)
Q Consensus       163 dg~i~iwd~~~~~~~~~~~~~~~~-------------------------------~~~~~~v-~~~~~~~~~~~l~~~~~  210 (454)
                      .|.|+-+|+.+++.+.........                               ......+ ...++.+...+++.+..
T Consensus       175 ~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg  254 (571)
T d2ad6a1         175 RGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSG  254 (571)
T ss_dssp             CCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECC
T ss_pred             cCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCcccccCCCccccccccchhcCeeeeecc
Confidence            678999999999887653321100                               0001112 23566666666665543


Q ss_pred             ----------------CCcEEEEeC-CCccEEeecccCCCe---------EEEEEcCCCC---EEEEEeCCCcEEEEeCC
Q psy17902        211 ----------------NSNIKLWSS-SLEHLHTFTGHKAPI---------TGLAISFECD---TLYSSSNDRSIKVWNIE  261 (454)
Q Consensus       211 ----------------dg~v~vw~~-~~~~~~~~~~~~~~v---------~~~~~~~~~~---~l~~~~~dg~i~iwd~~  261 (454)
                                      ...+...|+ +++.+..++.+...+         ....+..++.   .++.++.+|.++++|..
T Consensus       255 ~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~~~~g~~~~~v~~~~k~G~l~vlDr~  334 (571)
T d2ad6a1         255 NPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRE  334 (571)
T ss_dssp             CCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETT
T ss_pred             cccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeeeeccCccccceeeccccceEEEEecC
Confidence                            235666777 666666665332221         1122223443   46778899999999999


Q ss_pred             CceeEEEeeccC-------------------------------------Cce--eEEEeecCCCEEEEeeCC--------
Q psy17902        262 DRAYVETLFGHQ-------------------------------------SAI--TSLDILAKNRVISSGGTD--------  294 (454)
Q Consensus       262 ~~~~~~~~~~~~-------------------------------------~~v--~~~~~~~~~~~l~~~~~d--------  294 (454)
                      +++.+.......                                     +..  ...+++|+..+++....+        
T Consensus       335 tG~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~~~p~~~Gg~~w~~~a~dP~~~~~yv~~~~~~~~~~~~  414 (571)
T d2ad6a1         335 NGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPF  414 (571)
T ss_dssp             TCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEEC
T ss_pred             CCcEeeeeccCCcccccccccccccccccCcccccccccCceEEEeccccccccccceECCCCceEEEeccccccccccc
Confidence            998764321100                                     000  125566666666543322        


Q ss_pred             -----------------------------CcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902        295 -----------------------------KSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK  344 (454)
Q Consensus       295 -----------------------------g~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~  344 (454)
                                                   |.|.-+|+.+++.. ................++.+++++.||.++.+|..+
T Consensus       415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~t  494 (571)
T d2ad6a1         415 MLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKD  494 (571)
T ss_dssp             CCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTT
T ss_pred             cccccCCccccccceeeccccCCcccCCcccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCC
Confidence                                         35777777777776 222222222222334577888899999999999999


Q ss_pred             CccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902        345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS  383 (454)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~  383 (454)
                      ++.+..+.......        -.-+.|..+|+ ||++..
T Consensus       495 Ge~lW~~~l~~~~~--------a~P~ty~~dGkqYi~v~~  526 (571)
T d2ad6a1         495 GKELWNFKMPSGGI--------GSPMTYSFKGKQYIGSMY  526 (571)
T ss_dssp             CCEEEEEECSSCCC--------SCCEEEEETTEEEEEEEE
T ss_pred             CcEEEEEECCCCce--------ecceEEEECCEEEEEEEe
Confidence            99999998765432        12255666786 565543

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=0.012  Score=48.61  Aligned_cols=227  Identities=9%  Similarity=-0.006  Sum_probs=131.0

Q ss_pred             EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCce----eEEEeeccCCceeE
Q psy17902        204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRA----YVETLFGHQSAITS  278 (454)
Q Consensus       204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~----~~~~~~~~~~~v~~  278 (454)
                      +|+.+.. ..|+-.++.+.....+......+.++.|++..+.|+-.. ..+.|...++....    ....+......+.+
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~~~~~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~g   81 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG   81 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred             EEEEECC-CeEEEEECCCCcceeeeCCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcce
Confidence            3444443 458888886655555555566788999998877777665 45667766665321    11122223345678


Q ss_pred             EEeecCCCEEE-EeeCCCcEEEeeccCCeEE-EEccc-cCCeEEEEecCCCEEEEEe--CCCCEEEEecCCCccceeeec
Q psy17902        279 LDILAKNRVIS-SGGTDKSVRVWKIQEESQL-VFNGH-SRGIDMTRRVNDQQFITCG--EDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       279 ~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~-~~~~~-~~~i~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~  353 (454)
                      |++.+.+..|+ +-...+.|.+.++...... ..... ..+...+..+..++++...  ..+.|...++...........
T Consensus        82 lAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~  161 (266)
T d1ijqa1          82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE  161 (266)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred             EEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccccc
Confidence            88887665444 4455678999999876554 22222 2333334444455554433  334566666644333222211


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR  432 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~  432 (454)
                               .-...+.+++.+.++.|..+ ...+.|...++........+..........+|++.  +.+|+.+-..++.
T Consensus       162 ---------~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~  230 (266)
T d1ijqa1         162 ---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA  230 (266)
T ss_dssp             ---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred             ---------ccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCe
Confidence                     11237899999977765555 55788999998765433333332222345567776  4577776556778


Q ss_pred             eeeeeeeCCC
Q psy17902        433 FGRWKTIKGV  442 (454)
Q Consensus       433 i~~W~~~~~~  442 (454)
                      |...+...+.
T Consensus       231 I~~~~~~~g~  240 (266)
T d1ijqa1         231 IFSANRLTGS  240 (266)
T ss_dssp             EEEEETTTCC
T ss_pred             EEEEECCCCc
Confidence            8777665544

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=97.56  E-value=0.0098  Score=55.21  Aligned_cols=195  Identities=8%  Similarity=0.013  Sum_probs=107.2

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccC----CCCCCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeec
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTD----RKSYPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT  228 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~  228 (454)
                      ..|++++.++.|.-+|..+++.+..+......    ......+ ..+.+.  ...++.++.++.+...|. +++.+....
T Consensus        78 g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~~  155 (573)
T d1kb0a2          78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQN  155 (573)
T ss_dssp             TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             CEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceeccc
Confidence            46777788899999999999888765421100    0000011 122332  225667777888888887 666665443


Q ss_pred             cc--C-CCeEEEEEcC--CCCEEEEEeC------CCcEEEEeCCCceeEEEeeccC------------------------
Q psy17902        229 GH--K-APITGLAISF--ECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQ------------------------  273 (454)
Q Consensus       229 ~~--~-~~v~~~~~~~--~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~------------------------  273 (454)
                      ..  . ..+. +.-.|  -+..+++++.      .|.|..+|..+|+.+..+....                        
T Consensus       156 ~~~~~~~~~~-~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~~  234 (573)
T d1kb0a2         156 TFEGQKGSLT-ITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK  234 (573)
T ss_dssp             TTTTCCSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred             CccCCcceEE-eecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCCc
Confidence            21  1 1111 00011  1334555432      4689999999999887653211                        


Q ss_pred             -------Cce-eEEEeecCCCEEEEeeC-------------------CCcEEEeeccCCeEE-EEccccC----------
Q psy17902        274 -------SAI-TSLDILAKNRVISSGGT-------------------DKSVRVWKIQEESQL-VFNGHSR----------  315 (454)
Q Consensus       274 -------~~v-~~~~~~~~~~~l~~~~~-------------------dg~i~i~d~~~~~~~-~~~~~~~----------  315 (454)
                             ..+ ...++.+...+++.+..                   ...|.-.|+.+++.. .+.....          
T Consensus       235 ~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~~  314 (573)
T d1kb0a2         235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP  314 (573)
T ss_dssp             HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred             eeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccce
Confidence                   111 13455566555544321                   124566677777665 2222111          


Q ss_pred             CeEEEEecCC---CEEEEEeCCCCEEEEecCCCccceeee
Q psy17902        316 GIDMTRRVND---QQFITCGEDGTLSLWSILKKVPTHTIP  352 (454)
Q Consensus       316 ~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~  352 (454)
                      .+......++   ..++.++.+|.+.++|..+++.+....
T Consensus       315 ~~l~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~  354 (573)
T d1kb0a2         315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN  354 (573)
T ss_dssp             CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred             eeecceecCCCceeeeeeccccceeEEecccccccccccc
Confidence            1111112222   356778899999999999998876554

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=97.52  E-value=0.012  Score=54.45  Aligned_cols=212  Identities=9%  Similarity=-0.002  Sum_probs=123.4

Q ss_pred             CeEEEEEcCCCceecccCCcccCCC------------------------CCCc-eEEEEEeCCCcEEEEecC--------
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRK------------------------SYPP-ILALAVANNNELVASGDN--------  210 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~------------------------~~~~-v~~~~~~~~~~~l~~~~~--------  210 (454)
                      |.|.-+|..+++.+..+........                        .... -..+++.+...+++.+..        
T Consensus       178 G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~s~D~~~~l~y~~tgn~~~~~~~  257 (560)
T d1kv9a2         178 GFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNRE  257 (560)
T ss_dssp             CEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHH
T ss_pred             ceEEEEECCCceEEeeeeeccccccCCccccccccccccccccccccccCCCCcccccccccccCeeeecCCCCcccccc
Confidence            6799999999988876543221110                        0011 123566676666655432        


Q ss_pred             -----------CCcEEEEeC-CCccEEeecccCCCeE---------EEEEcCCC---CEEEEEeCCCcEEEEeCCCceeE
Q psy17902        211 -----------NSNIKLWSS-SLEHLHTFTGHKAPIT---------GLAISFEC---DTLYSSSNDRSIKVWNIEDRAYV  266 (454)
Q Consensus       211 -----------dg~v~vw~~-~~~~~~~~~~~~~~v~---------~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~  266 (454)
                                 ...|...|+ +++....++.....+.         -+.+..++   ..++.++.+|.++++|..+++.+
T Consensus       258 ~~~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~~g~~~~~v~~~~k~G~~~~lDr~tG~~i  337 (560)
T d1kv9a2         258 VRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI  337 (560)
T ss_dssp             HHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred             cccccCCccccceeeEEecCCccceeEEEeccccccccccccceeeeeeeecCCceeeeeeecCccceEEEEecCCCccc
Confidence                       234666677 5555544443222211         12222233   36777889999999999999876


Q ss_pred             EEeeccC-C-----------------------------------ceeEEEeecCCCEEEEeeC-----------------
Q psy17902        267 ETLFGHQ-S-----------------------------------AITSLDILAKNRVISSGGT-----------------  293 (454)
Q Consensus       267 ~~~~~~~-~-----------------------------------~v~~~~~~~~~~~l~~~~~-----------------  293 (454)
                      .....-. .                                   .-...+++|+..+++....                 
T Consensus       338 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~~~~~~~~~  417 (560)
T d1kv9a2         338 SAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRK  417 (560)
T ss_dssp             EEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCS
T ss_pred             ccccccccccccccChhhccccccccccccccceeeeeccccccccccccccCCCCeeecccccccceeecccccccccc
Confidence            5432100 0                                   0013456666666554332                 


Q ss_pred             -------------------CCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902        294 -------------------DKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV  353 (454)
Q Consensus       294 -------------------dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  353 (454)
                                         .|.|.-||+.+++.. .+..............++++++|+.||.++.||..+++.+..+..
T Consensus       418 ~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l  497 (560)
T d1kv9a2         418 AFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA  497 (560)
T ss_dssp             SCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred             ccccccCcccccCCCCcccccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEEC
Confidence                               245778888888877 222222111222334577888999999999999999999999987


Q ss_pred             ccCCCCCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902        354 AHGYDSSSSEPNWITSVACLHNSD-LVASGS  383 (454)
Q Consensus       354 ~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~  383 (454)
                      .....     ..   -+.+..+|+ ||++.+
T Consensus       498 ~~~~~-----~~---P~ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         498 QSGIV-----AA---PMTFELAGRQYVAIMA  520 (560)
T ss_dssp             SSCCC-----SC---CEEEEETTEEEEEEEE
T ss_pred             CCCcc-----cc---CEEEEECCEEEEEEEe
Confidence            65432     11   145556776 555443

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.47  E-value=0.032  Score=49.58  Aligned_cols=240  Identities=9%  Similarity=0.056  Sum_probs=126.0

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeC-C----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC----
Q psy17902        141 HRASITCIAVTSDSKHVYSACK-D----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----  211 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----  211 (454)
                      +.-.+..+++||+++++|.+-. .    ..|+++|+.+++.+....       .......++|.+++..|+....+    
T Consensus       123 ~~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i-------~~~~~~~~~W~~D~~~~~Y~~~~~~~~  195 (430)
T d1qfma1         123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-------ERVKFSCMAWTHDGKGMFYNAYPQQDG  195 (430)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-------EEECSCCEEECTTSSEEEEEECCCCSS
T ss_pred             ccceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccc-------ccccccceEEcCCCCEEEEEEeccccC
Confidence            3334557788999999886532 2    389999999987654221       01112468899999877654322    


Q ss_pred             ------------CcEEEEeCCC---ccEEeeccc--CCCeEEEEEcCCCCEEEEEeC---CCc--EEEEeCCCce-----
Q psy17902        212 ------------SNIKLWSSSL---EHLHTFTGH--KAPITGLAISFECDTLYSSSN---DRS--IKVWNIEDRA-----  264 (454)
Q Consensus       212 ------------g~v~vw~~~~---~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~---dg~--i~iwd~~~~~-----  264 (454)
                                  ..|..|.+..   .....+...  ...+..+..++++++++....   ++.  +.+.++....     
T Consensus       196 ~~~~~~~~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~  275 (430)
T d1qfma1         196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG  275 (430)
T ss_dssp             CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred             cccccccccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCccccccc
Confidence                        2577777722   223333332  334667778899998775432   333  3444543221     


Q ss_pred             ---eEEEeeccCCceeEEEeecCCCEEEEee---CCCcEEEeeccCCeE----EEEccccCCeE-EEEecCCCEEEEEe-
Q psy17902        265 ---YVETLFGHQSAITSLDILAKNRVISSGG---TDKSVRVWKIQEESQ----LVFNGHSRGID-MTRRVNDQQFITCG-  332 (454)
Q Consensus       265 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~----~~~~~~~~~i~-~~~~~~~~~l~~~~-  332 (454)
                         ....+......+.-+. +..+.+++...   .++.|...++.....    ..+..+...+. ......+++|+... 
T Consensus       276 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~~~~~~~~~~~~~~~~~lvl~~~  354 (430)
T d1qfma1         276 ILKWVKLIDNFEGEYDYVT-NEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL  354 (430)
T ss_dssp             SCCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred             ccceeEeecccccceEEEe-cCCceeecccCcccccceeEEecCCCCccccceEEecccCcceeeeEEEEECCEEEEEEE
Confidence               1112222222232222 22333333332   235666666655332    13333444333 23333455565444 


Q ss_pred             CCC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE--ecC--CCcEEEEEcCCCc
Q psy17902        333 EDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS--GSY--DGCVKLWKITPKR  397 (454)
Q Consensus       333 ~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~--dg~v~iwd~~~~~  397 (454)
                      .++  .|+++++..+.........         .+.+..+...++...+..  .|.  -.++.-+|+.+++
T Consensus       355 ~~~~~~l~v~~~~~~~~~~~~~~~---------~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~  416 (430)
T d1qfma1         355 HDVKNTLQLHDLATGALLKIFPLE---------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE  416 (430)
T ss_dssp             ETTEEEEEEEETTTCCEEEEECCC---------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred             cCCEeEEEEEECCCCcEEEecCCC---------CceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCC
Confidence            554  5788998877654443322         222555555555553332  221  2578888888774

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.022  Score=46.85  Aligned_cols=233  Identities=8%  Similarity=-0.004  Sum_probs=136.1

Q ss_pred             EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCCc-----cEEeecc
Q psy17902        156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSLE-----HLHTFTG  229 (454)
Q Consensus       156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~~-----~~~~~~~  229 (454)
                      +|+.+.. ..|+..++++......++       ....+.+++|.+..+.|+... ..+.|.-.++.+.     ....+..
T Consensus         3 fLl~s~~-~~I~~~~l~~~~~~~~~~-------~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~   74 (266)
T d1ijqa1           3 YLFFTNR-HEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR   74 (266)
T ss_dssp             EEEEECB-SSEEEEETTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred             EEEEECC-CeEEEEECCCCcceeeeC-------CCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeC
Confidence            4454443 358888887655433322       334678899998877777664 4566766666321     1222333


Q ss_pred             cCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee--CCCcEEEeeccCCe
Q psy17902        230 HKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG--TDKSVRVWKIQEES  306 (454)
Q Consensus       230 ~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~  306 (454)
                      ....+.+|++.+-+..|+.+ ...+.|.+.++........+.........++++|...+|+...  ..+.|...++....
T Consensus        75 ~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~  154 (266)
T d1ijqa1          75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD  154 (266)
T ss_dssp             SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred             CCCCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc
Confidence            34557788988766555555 4567899999987665555555556788999998766665443  34457666776554


Q ss_pred             EEEEc-cccCCeEEEEe-cCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902        307 QLVFN-GHSRGIDMTRR-VNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS  383 (454)
Q Consensus       307 ~~~~~-~~~~~i~~~~~-~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~  383 (454)
                      ...+. ..-.....+.. +.++.|. +-...+.|...++..............       ......|++. .+.+..+-.
T Consensus       155 ~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~-------~~~p~~lav~-~~~ly~td~  226 (266)
T d1ijqa1         155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-------LAHPFSLAVF-EDKVFWTDI  226 (266)
T ss_dssp             EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT-------TSSEEEEEEE-TTEEEEEET
T ss_pred             eecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCc-------ccccEEEEEE-CCEEEEEEC
Confidence            44332 22222333333 3455444 445678888888865443332222111       1125677776 334444445


Q ss_pred             CCCcEEEEEcCCCceeeEecc
Q psy17902        384 YDGCVKLWKITPKRTLEFLQD  404 (454)
Q Consensus       384 ~dg~v~iwd~~~~~~~~~~~~  404 (454)
                      .++.|...+..++.....+..
T Consensus       227 ~~~~I~~~~~~~g~~~~~~~~  247 (266)
T d1ijqa1         227 INEAIFSANRLTGSDVNLLAE  247 (266)
T ss_dssp             TTTEEEEEETTTCCCCEEEEC
T ss_pred             CCCeEEEEECCCCcceEEEEc
Confidence            677888888877766655543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.25  E-value=0.058  Score=47.83  Aligned_cols=242  Identities=9%  Similarity=0.023  Sum_probs=127.0

Q ss_pred             ceEEEEEeCCCcEEEEecC-----CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC--------------
Q psy17902        192 PILALAVANNNELVASGDN-----NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND--------------  252 (454)
Q Consensus       192 ~v~~~~~~~~~~~l~~~~~-----dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------  252 (454)
                      .+..++++|+++++|.+-.     ...|+++|+.+.......-.......++|.++++.|+....+              
T Consensus       126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~  205 (430)
T d1qfma1         126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN  205 (430)
T ss_dssp             EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred             eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccC
Confidence            4556788999999886432     247899999443332221112223568899999887765432              


Q ss_pred             --CcEEEEeCCCcee--EEEeecc--CCceeEEEeecCCCEEEEeeC---CCc--EEEeeccCCeE--------E-EEcc
Q psy17902        253 --RSIKVWNIEDRAY--VETLFGH--QSAITSLDILAKNRVISSGGT---DKS--VRVWKIQEESQ--------L-VFNG  312 (454)
Q Consensus       253 --g~i~iwd~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~~~~---dg~--i~i~d~~~~~~--------~-~~~~  312 (454)
                        ..|..+.+.+...  +..+...  ...+..+..++++++++....   +..  +.+.++.....        . ....
T Consensus       206 ~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~  285 (430)
T d1qfma1         206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN  285 (430)
T ss_dssp             CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred             CcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEeeCCCcccccccccceeEeecc
Confidence              2577888776532  2233322  234566778889888764332   333  34445443211        1 2222


Q ss_pred             ccCCeEEEEecCCCEEEEEe----CCCCEEEEecCCCccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCC
Q psy17902        313 HSRGIDMTRRVNDQQFITCG----EDGTLSLWSILKKVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYD  385 (454)
Q Consensus       313 ~~~~i~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d  385 (454)
                      .......+.. .+..|+.-+    .++.|...++......  ..+-..        +...+..-.++..+.+|+.. ..+
T Consensus       286 ~~~~~~~~~~-~~~~~~~~Tn~~a~~~~L~~~~~~~~~~~~w~~vi~~--------~~~~~~~~~~~~~~~~lvl~~~~~  356 (430)
T d1qfma1         286 FEGEYDYVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE--------HEKDVLEWVACVRSNFLVLCYLHD  356 (430)
T ss_dssp             SSSCEEEEEE-ETTEEEEEECTTCTTCEEEEEETTBCCGGGCEEEECC--------CSSCEEEEEEEETTTEEEEEEEET
T ss_pred             cccceEEEec-CCceeecccCcccccceeEEecCCCCccccceEEecc--------cCcceeeeEEEEECCEEEEEEEcC
Confidence            2223333333 333333332    3456666666544321  122111        12224444444455555544 445


Q ss_pred             C--cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---CCCceeeeeeeCCCee
Q psy17902        386 G--CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG---TEHRFGRWKTIKGVKN  444 (454)
Q Consensus       386 g--~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~---~d~~i~~W~~~~~~~~  444 (454)
                      +  .|+++++.++........  ..+.|..+...++...+....+   .-.++..+|..++...
T Consensus       357 ~~~~l~v~~~~~~~~~~~~~~--~~~sv~~~~~~~~~~~~~~~~ss~~tP~~~y~~Dl~t~~~~  418 (430)
T d1qfma1         357 VKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELE  418 (430)
T ss_dssp             TEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCC
T ss_pred             CEeEEEEEECCCCcEEEecCC--CCceEeeccCCCCCCEEEEEEcCCCCCCeEEEEECCCCCcc
Confidence            4  588899988765544332  3456667776677665544322   2456666776665433

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.00  E-value=0.059  Score=45.92  Aligned_cols=156  Identities=12%  Similarity=0.145  Sum_probs=91.3

Q ss_pred             eEEEeecCCCEEEEeeC------------CCcEEEeeccCCeEE----EEcc--------ccCCeEEEEecCCC-EEEEE
Q psy17902        277 TSLDILAKNRVISSGGT------------DKSVRVWKIQEESQL----VFNG--------HSRGIDMTRRVNDQ-QFITC  331 (454)
Q Consensus       277 ~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~----~~~~--------~~~~i~~~~~~~~~-~l~~~  331 (454)
                      -.|...|+|..+++++.            .|.|.++|+.+....    .+.+        ++.++......++. +|++.
T Consensus        38 EDi~~~~dg~~~issg~~~~~~~~~~~~~~G~i~~~dl~~~~~~~~~l~~~~~~~~~~~f~PhGi~l~~~~dg~~~L~vv  117 (340)
T d1v04a_          38 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV  117 (340)
T ss_dssp             CEEEECTTSEEEEEECCCC--------CCCCEEEEEETTSSSCCEEECEEECSSSCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred             ceEEECCCCcEEEEecCccCCCCCCCCCCCCeEEEEecCCCCCcceEEEecCCCCCCcceeccceeEEEcCCCcEEEEEE
Confidence            45667777766555432            488999998765332    2221        22333333333444 34443


Q ss_pred             e---CCCCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC---------------CCcEEEE
Q psy17902        332 G---EDGTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY---------------DGCVKLW  391 (454)
Q Consensus       332 ~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------------dg~v~iw  391 (454)
                      .   ...+|.+|++.....  .+.-....      ......+.+++..++.+++|-..               -+...+|
T Consensus       118 nH~~~~~~ieif~~~~~~~~l~~~~~v~~------~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~  191 (340)
T d1v04a_         118 NHPGSSSTVEVFKFQEEEKSLLHLKTIRH------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT  191 (340)
T ss_dssp             ECSTTCCEEEEEEEETTTTEEEEEEEECC------TTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEE
T ss_pred             eccCCCceeEEEEEeCCCCeEEEEeecCC------ccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEE
Confidence            2   456788888754332  11111111      12334889999999998888311               1234555


Q ss_pred             EcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902        392 KITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG  441 (454)
Q Consensus       392 d~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~  441 (454)
                      ....+.......   .....+.++++||+++|+++....++|++|+....
T Consensus       192 ~~~~~~~~~~~~---~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~  238 (340)
T d1v04a_         192 YYSPNDVRVVAE---GFDFANGINISPDGKYVYIAELLAHKIHVYEKHAN  238 (340)
T ss_dssp             EECSSCEEEEEE---EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred             EEcCCceEEEcC---CCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCC
Confidence            554443322222   33458899999999999999888999999887654

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=96.96  E-value=0.076  Score=45.11  Aligned_cols=192  Identities=7%  Similarity=0.129  Sum_probs=111.3

Q ss_pred             CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC------CCcEEEEec-C-C--CcEEEEeC--
Q psy17902        152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN------NNELVASGD-N-N--SNIKLWSS--  219 (454)
Q Consensus       152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~-~-d--g~v~vw~~--  219 (454)
                      |+..+++.....+-|++||++ ++.+..++.        +.++.+..-.      ...-|++++ . +  ..|.+|.+  
T Consensus        38 p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~~--------Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~  108 (353)
T d1h6la_          38 PQNSKLITTNKKSGLAVYSLE-GKMLHSYHT--------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG  108 (353)
T ss_dssp             GGGCEEEEEETTSCCEEEETT-CCEEEECCS--------SCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEET
T ss_pred             cCccEEEEEcCcCCEEEEcCC-CcEEEeccc--------CCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecC
Confidence            455677777788789999996 666555432        3555555432      222344444 2 2  35777877  


Q ss_pred             CCccEEeeccc-------CCCeEEEEE--cCC-CC-EEEEEeCCCcEEEEeCC---Cc----eeEEEeeccCCceeEEEe
Q psy17902        220 SLEHLHTFTGH-------KAPITGLAI--SFE-CD-TLYSSSNDRSIKVWNIE---DR----AYVETLFGHQSAITSLDI  281 (454)
Q Consensus       220 ~~~~~~~~~~~-------~~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~---~~----~~~~~~~~~~~~v~~~~~  281 (454)
                      ....+..+...       ...++.+|+  ++. +. ++++...+|.+..|.+.   .+    +.++.+. ....+..+.+
T Consensus       109 ~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~-~~~q~EGCVv  187 (353)
T d1h6la_         109 KNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFK-MNSQTEGMAA  187 (353)
T ss_dssp             TTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEE-CSSCEEEEEE
T ss_pred             cccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccC-CCCccceEEE
Confidence            33334433221       124677777  554 43 56667778999888763   22    3344553 4567889999


Q ss_pred             ecCCCEEEEeeCCCcEEEeeccC-----CeEEEEc-c--ccCC---eEEEEecC-CCEEEEEe-CCCCEEEEecCCC-cc
Q psy17902        282 LAKNRVISSGGTDKSVRVWKIQE-----ESQLVFN-G--HSRG---IDMTRRVN-DQQFITCG-EDGTLSLWSILKK-VP  347 (454)
Q Consensus       282 ~~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~-~--~~~~---i~~~~~~~-~~~l~~~~-~dg~i~iwd~~~~-~~  347 (454)
                      .+....|+.+-.+.-|..+++..     ...+... +  ....   +......+ ..+|++.+ .+++..+||.... ..
T Consensus       188 Dde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~  267 (353)
T d1h6la_         188 DDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKY  267 (353)
T ss_dssp             ETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred             eCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccc
Confidence            98888898887776665555432     1122111 1  1222   33333333 33666555 6788999998763 55


Q ss_pred             ceeeec
Q psy17902        348 THTIPV  353 (454)
Q Consensus       348 ~~~~~~  353 (454)
                      +..+..
T Consensus       268 ~g~F~i  273 (353)
T d1h6la_         268 VADFQI  273 (353)
T ss_dssp             EEEEEE
T ss_pred             cceEEE
Confidence            555554

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=96.78  E-value=0.073  Score=45.29  Aligned_cols=60  Identities=8%  Similarity=0.121  Sum_probs=40.1

Q ss_pred             EEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC-CCCEEEEE
Q psy17902        367 ITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS-DHKHLVAG  426 (454)
Q Consensus       367 i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~~~  426 (454)
                      .+.|+++|++++|+++ +..+.|++|++.....+.........+.+-.+.+.+ +|.+.+++
T Consensus       208 pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         208 ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred             cceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence            7899999999866554 567889999997654443333323455667788876 45555444

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.68  E-value=0.12  Score=42.42  Aligned_cols=215  Identities=11%  Similarity=0.120  Sum_probs=99.6

Q ss_pred             CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---------CCcEEEEeCCCccEEeecc---cC
Q psy17902        164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---------NSNIKLWSSSLEHLHTFTG---HK  231 (454)
Q Consensus       164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~v~vw~~~~~~~~~~~~---~~  231 (454)
                      ..+.+||+.+.+-...........+|     +++. -++.+++.|+.         -..+.+||.....-..+..   ..
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~~-----~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r   92 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSGL-----AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPR   92 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSC-----EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCC
T ss_pred             ceEEEEECCCCeEEECCCCCCcccee-----EEEE-ECCEEEEEeCcccCCCCccccchhhhccccccccccccccccee
Confidence            36789999886533322221111111     1222 25666666653         1356778874433333221   11


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCc-----EEEEeCCCceeEEEeeccCC-ceeEEEeecCCCEEEEeeCC-----CcEEEe
Q psy17902        232 APITGLAISFECDTLYSSSNDRS-----IKVWNIEDRAYVETLFGHQS-AITSLDILAKNRVISSGGTD-----KSVRVW  300 (454)
Q Consensus       232 ~~v~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d-----g~i~i~  300 (454)
                      ....++.  .+++.++.++.++.     +..++..+............ .-.++... ++.+++.|+.+     ..+..|
T Consensus        93 ~~~~~~~--~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~~~GG~~~~~~~~~~~~~  169 (288)
T d1zgka1          93 NRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECY  169 (288)
T ss_dssp             BTCEEEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEE
T ss_pred             cceeccc--cceeeEEecceecccccceeeeeccccCccccccccccccccceeeee-eecceEecCcccccccceEEEe
Confidence            1112222  24556665554333     44566666543321111110 11122222 44555555543     357788


Q ss_pred             eccCCeEEEEccccC--CeEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902        301 KIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL  373 (454)
Q Consensus       301 d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s  373 (454)
                      |..+...........  .........+..++.++.+     ..+.+||..+......-+...        ...-.+++. 
T Consensus       170 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~~~p~--------~r~~~~~~~-  240 (288)
T d1zgka1         170 YPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKH--------RRSALGITV-  240 (288)
T ss_dssp             ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSS--------CCBSCEEEE-
T ss_pred             eccccccccccccccccccccccceeeeEEEecCccccccccceeeeeecceeeecccCccC--------cccceEEEE-
Confidence            887766553322221  1223444456666666543     345667766544332211111        100112222 


Q ss_pred             cCCCEEEEecCCC-----cEEEEEcCCC
Q psy17902        374 HNSDLVASGSYDG-----CVKLWKITPK  396 (454)
Q Consensus       374 ~~~~~l~~~~~dg-----~v~iwd~~~~  396 (454)
                      .++++++.|+.++     .|.+||+.++
T Consensus       241 ~~~~l~v~GG~~~~~~~~~v~~yd~~~~  268 (288)
T d1zgka1         241 HQGRIYVLGGYDGHTFLDSVECYDPDTD  268 (288)
T ss_dssp             ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred             ECCEEEEEecCCCCeecceEEEEECCCC
Confidence            3677888887654     3788998876

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.66  E-value=0.25  Score=45.52  Aligned_cols=114  Identities=9%  Similarity=-0.002  Sum_probs=61.9

Q ss_pred             CEEEEEeCCCeEEEEEcCCCceecccCCcccC--CCCCCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeec--
Q psy17902        155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTD--RKSYPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFT--  228 (454)
Q Consensus       155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~--  228 (454)
                      ..|++++.++.|.-.|..+++.+..+......  ......+ ..+++.  +..++.++.++.+...|. +++.+....  
T Consensus        69 g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~t~~~~l~alda~tG~~~W~~~~~  146 (582)
T d1flga_          69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGKVVWKKKFA  146 (582)
T ss_dssp             TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred             CEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEe--CCceEEecCCCeEEEecccccceeeeeccc
Confidence            57777888899999999999888764321110  0000111 123332  335677788888888888 566554332  


Q ss_pred             ccCC-C-e--EEEEEcC--CCCEEEEE-------eCCCcEEEEeCCCceeEEEee
Q psy17902        229 GHKA-P-I--TGLAISF--ECDTLYSS-------SNDRSIKVWNIEDRAYVETLF  270 (454)
Q Consensus       229 ~~~~-~-v--~~~~~~~--~~~~l~~~-------~~dg~i~iwd~~~~~~~~~~~  270 (454)
                      .+.. . +  .-+.+.+  .+..++..       +..+.|.-+|..+++.+..+.
T Consensus       147 ~~~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~  201 (582)
T d1flga_         147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP  201 (582)
T ss_dssp             CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred             CCCccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEe
Confidence            1110 0 0  0011111  12333333       234678899999998876653

>d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Acylamino-acid-releasing enzyme, N-terminal donain
domain: Acylamino-acid-releasing enzyme, N-terminal donain
species: Aeropyrum pernix [TaxId: 56636]

Probab=96.09  E-value=0.2  Score=38.42  Aligned_cols=233  Identities=13%  Similarity=0.106  Sum_probs=118.1

Q ss_pred             CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEE------ecCCCcEEEEeCC--Ccc
Q psy17902        153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVAS------GDNNSNIKLWSSS--LEH  223 (454)
Q Consensus       153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~------~~~dg~v~vw~~~--~~~  223 (454)
                      +.++|+++...|.+.++-+..++......         .+|.....-. .-.++..      |-.-..|.+-++.  ++.
T Consensus        25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---------ePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE   95 (313)
T d2hu7a1          25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---------EPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEE   95 (313)
T ss_dssp             TTEEEEEEEETTEEEEEEESSSSCEECCS---------SCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCE
T ss_pred             CCcEEEEEeccceEEEEEEeCCEEEEEec---------ccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCee
Confidence            34588888889999999888776544322         1222211111 1111211      1222356666663  433


Q ss_pred             EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEE----eeCCCcEE
Q psy17902        224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISS----GGTDKSVR  298 (454)
Q Consensus       224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~----~~~dg~i~  298 (454)
                      ...-....-.|.+++.. +.+..++|+......+|-++.|+...... ..-+-|+.+.    +++++-    ++......
T Consensus        96 ~~i~spk~vRI~S~~yd-dk~vvF~Gased~~~LYviegGklrkL~~vPpFsFVtDI~----~d~I~G~g~~~g~~~sfF  170 (313)
T d2hu7a1          96 QRLEAVKPMRILSGVDT-GEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIR----GDLIAGLGFFGGGRVSLF  170 (313)
T ss_dssp             EECTTSCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEE----TTEEEEEEEEETTEEEEE
T ss_pred             eEecCCceEEEEEeeec-CceEEEecccCCceEEEEEeCCceeeeccCCCcceEEecc----CCeEEEEeeecCCcceEE
Confidence            33322233567777765 55678888888888999888776432211 1112222221    222221    11112233


Q ss_pred             EeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC---CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902        299 VWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN  375 (454)
Q Consensus       299 i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~  375 (454)
                      +-|+.++....+....+.++......++.++++-..   ....-+|+++++.... .... .....-.+..|+-+-+.|+
T Consensus       171 ~adl~SG~lri~tpkeGS~~~ay~~~gnKV~sdyEt~gEsywit~D~~s~~yerv-e~P~-kd~~sy~p~~I~~~~Y~Pd  248 (313)
T d2hu7a1         171 TSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVEDL-ELPS-KDFSSYRPTAITWLGYLPD  248 (313)
T ss_dssp             EEETTTEEEEEECCSSEEEEEEEECTTSCEEEEEEESSCEEEEEECTTTCCEEEC-CCSS-CHHHHHCCSEEEEEEECTT
T ss_pred             EEecccCCEEEecCCCCcccceeEccCceeeeccCCCCceEEEEEecccCceeee-ecCc-ccceeecceEEEeeeeCCC
Confidence            444444444444445555555555556555443311   1112346655432211 0000 0000012334777889999


Q ss_pred             CCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902        376 SDLVASGSYDGCVKLWKITPKRTLEFLQ  403 (454)
Q Consensus       376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~  403 (454)
                      +++++.+-.||.-++|.  +|+.+...+
T Consensus       249 d~L~iiakrdG~s~lF~--nGk~in~p~  274 (313)
T d2hu7a1         249 GRLAVVARREGRSAVFI--DGERVEAPQ  274 (313)
T ss_dssp             SCEEEEEEETTEEEEEE--TTEEECCCS
T ss_pred             CcEEEEEecCCchheee--cceEecCCC
Confidence            99999999999999986  355554433

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.81  E-value=0.45  Score=40.20  Aligned_cols=196  Identities=12%  Similarity=0.177  Sum_probs=108.8

Q ss_pred             CCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcC------CCCEEEEEeC--C--CcEEEEeCCC-ceeEEEe
Q psy17902        201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISF------ECDTLYSSSN--D--RSIKVWNIED-RAYVETL  269 (454)
Q Consensus       201 ~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~--d--g~i~iwd~~~-~~~~~~~  269 (454)
                      +..+++.....+-|++||+.++.+..+.  .+.++.+..-.      ....|++++.  +  .+|.+|.+.. ...+..+
T Consensus        39 ~~SlI~gTdK~~Gl~vYdL~G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~~~id~~~~~l~~~  116 (353)
T d1h6la_          39 QNSKLITTNKKSGLAVYSLEGKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSI  116 (353)
T ss_dssp             GGCEEEEEETTSCCEEEETTCCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEEEEEETTTTEEEEC
T ss_pred             CccEEEEEcCcCCEEEEcCCCcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEEEEecCcccccccc
Confidence            4557777777777999999999888775  35666555432      2223555552  2  3577787742 2223333


Q ss_pred             ecc-------CCceeEEEe--ecC-CC-EEEEeeCCCcEEEeeccC---CeE----EEEccccCCe-EEEEecCCCEEEE
Q psy17902        270 FGH-------QSAITSLDI--LAK-NR-VISSGGTDKSVRVWKIQE---ESQ----LVFNGHSRGI-DMTRRVNDQQFIT  330 (454)
Q Consensus       270 ~~~-------~~~v~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~~---~~~----~~~~~~~~~i-~~~~~~~~~~l~~  330 (454)
                      ...       ...+..+|+  ++. +. ++++...+|.+..|.+..   +..    +........+ .|+.-...+.|+.
T Consensus       117 ~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~Lyi  196 (353)
T d1h6la_         117 TDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYI  196 (353)
T ss_dssp             SCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred             cccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEE
Confidence            211       224667777  554 33 566777889998887742   222    1122223334 4555555678888


Q ss_pred             EeCCCCEEEEecCCC--ccceeeecccCCCCCCCCCCcEEEEEEec--C--CCEEEEecCCCcEEEEEcCCC-ceeeEe
Q psy17902        331 CGEDGTLSLWSILKK--VPTHTIPVAHGYDSSSSEPNWITSVACLH--N--SDLVASGSYDGCVKLWKITPK-RTLEFL  402 (454)
Q Consensus       331 ~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~--~~~l~~~~~dg~v~iwd~~~~-~~~~~~  402 (454)
                      +-.+.-|..+++...  .....+....+.    ....-+-.|+.-.  +  |-+|++.-.+++..|||.... ..+..+
T Consensus       197 sEE~~Giw~~~a~~~~~~~~~~i~~~~g~----~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F  271 (353)
T d1h6la_         197 AEEDEAIWKFSAEPDGGSNGTVIDRADGR----HLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADF  271 (353)
T ss_dssp             EETTTEEEEEESSTTSCSCCEEEEECSSS----SCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred             ecCccceEEEEeccCCCccceeeecccCc----cccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceE
Confidence            888776666665422  111111111110    0123366676543  2  335555556889999998764 444444

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.69  E-value=0.38  Score=41.11  Aligned_cols=179  Identities=11%  Similarity=0.036  Sum_probs=96.3

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----------ceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902        233 PITGLAISFECDTLYSSSNDRSIKVWNIED-----------RAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK  301 (454)
Q Consensus       233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d  301 (454)
                      ...-++.++...++++|+.++ +.|..+..           .......  .-..|..++|+.+  .|+.. .++.+..++
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~--~ip~v~~vafs~d--~l~v~-~~~~l~~~~  111 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK--EIPDVIFVCFHGD--QVLVS-TRNALYSLD  111 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE--ECTTEEEEEEETT--EEEEE-ESSEEEEEE
T ss_pred             ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceecc--CCCCeEEEEeeCC--EEEEE-eCCCEEEEE
Confidence            455678888777888888776 56665321           1111111  1235888999744  45444 455677777


Q ss_pred             ccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902        302 IQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA  380 (454)
Q Consensus       302 ~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~  380 (454)
                      ...-... ........+..+... ...++....+|.+.++++..+.............    -...+.+++|++.|..++
T Consensus       112 ~~~l~~~~~~~~~~~~~~~~~~~-p~~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~----~~~~~~~v~ws~kgkq~v  186 (381)
T d1xipa_         112 LEELSEFRTVTSFEKPVFQLKNV-NNTLVILNSVNDLSALDLRTKSTKQLAQNVTSFD----VTNSQLAVLLKDRSFQSF  186 (381)
T ss_dssp             SSSTTCEEEEEECSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEEEEEESEEEEE----ECSSEEEEEETTSCEEEE
T ss_pred             eeccccccccccccccccceecC-CceeEEEecCCCEEEEEeccCccccccCCcceEE----ecCCceEEEEeCCcEEEE
Confidence            7654333 222223344444443 4567777789999999998875433222111000    012267777777777666


Q ss_pred             EecCCCcEEEE-EcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEE
Q psy17902        381 SGSYDGCVKLW-KITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAG  426 (454)
Q Consensus       381 ~~~~dg~v~iw-d~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~  426 (454)
                      ++..++ ..+- ++....   .+.. ......|.++.|-.+..++++-
T Consensus       187 ~~~g~~-~q~k~~i~~~~---~~~~p~~~~~~v~sI~WL~~~~F~vvy  230 (381)
T d1xipa_         187 AWRNGE-MEKQFEFSLPS---ELEELPVEEYSPLSVTILSPQDFLAVF  230 (381)
T ss_dssp             EEETTE-EEEEEEECCCH---HHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred             EeCCCc-eeeccCCCCcc---ccCCCcCCCcceeEEEEecCceEEEEE
Confidence            663322 2221 111111   1111 1134568899999777776654

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=92.88  E-value=1.9  Score=34.75  Aligned_cols=218  Identities=13%  Similarity=0.070  Sum_probs=102.2

Q ss_pred             CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902        191 PPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL  269 (454)
Q Consensus       191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~  269 (454)
                      ..|..|+-. ....++ .. ||.|..|-. ....+-.-......|..++.-. ...++ - .||.+..|.....-.....
T Consensus        26 ~~i~~va~G-~~h~~a-l~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~-~~~~a-l-~dg~v~~wG~~~~gq~~~~   99 (273)
T d1jtdb_          26 SGVDAIAGG-YFHGLA-LK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGN-YHSLA-L-KDGEVIAWGGNEDGQTTVP   99 (273)
T ss_dssp             SSEEEEEEC-SSEEEE-EE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECS-SEEEE-E-ETTEEEEEECCTTSTTCCC
T ss_pred             CCcEEEEcc-CCEEEE-EE-CCEEEEEeCCCCCceeeeecccccceEEecCC-Cceee-e-eeeeeeccCCCcceeeccc
Confidence            457777663 233344 34 799999976 2222222222334555555422 22222 2 4899999976432211111


Q ss_pred             eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc
Q psy17902        270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT  348 (454)
Q Consensus       270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~  348 (454)
                      ......+..+...... .++  -.|+.+..|........ ........+..+..  ..+.+....++.+..|-.......
T Consensus       100 ~~~~~~~~~i~~~~~~-~~~--~~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~g~~~~~G~~~~g~~  174 (273)
T d1jtdb_         100 AEARSGVDAIAAGAWA-SYA--LKDGKVIAWGDDSDGQTTVPAEAQSGVTALDG--GVYTALAVKNGGVIAWGDNYFGQT  174 (273)
T ss_dssp             GGGGSSCCEEEEETTE-EEE--EETTEEEEEECCTTSTTSCCGGGGSSEEEEEE--CSSEEEEEETTEEEEEECCTTSTT
T ss_pred             cccccceeEEeeeccc-ccc--cccccceecccCCCCceeeeccCCceEEEEec--cceeeeeecccceeEeecccCCcc
Confidence            1122334455543222 222  24788888875433222 11122223333322  222233345788888866443322


Q ss_pred             eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902        349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG  428 (454)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~  428 (454)
                      ... ..        ....|..|+....  ..+.-. ||.|+.|=....-.+....  .....|..|+-... ..++ -  
T Consensus       175 ~~~-~~--------~~~~v~~Is~G~~--h~~~l~-dG~v~~WG~n~~Gql~~~~--~~~~~v~~I~~G~~-~~~~-l--  236 (273)
T d1jtdb_         175 TVP-AE--------AQSGVDDVAGGIF--HSLALK-DGKVIAWGDNRYKQTTVPT--EALSGVSAIASGEW-YSLA-L--  236 (273)
T ss_dssp             SCC-GG--------GSSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTCCCG--GGGSSCCEEEECSS-CEEE-E--
T ss_pred             ccc-cc--------ccCCccceeccce--eeEEEe-cCcEEEcCCCCCCccCCCc--cCCCCcEEEEeCcc-eEEE-E--
Confidence            111 11        1223777765432  222223 7999999654332221111  12234666665432 2333 2  


Q ss_pred             CCCceeeee
Q psy17902        429 TEHRFGRWK  437 (454)
Q Consensus       429 ~d~~i~~W~  437 (454)
                      .|+.|..|-
T Consensus       237 ~~g~v~~WG  245 (273)
T d1jtdb_         237 KNGKVIAWG  245 (273)
T ss_dssp             ETTEEEEES
T ss_pred             ECCEEEEEC
Confidence            378999994

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=91.26  E-value=4.3  Score=35.39  Aligned_cols=61  Identities=13%  Similarity=0.087  Sum_probs=41.3

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCC--cccCCCCCCceEEEEEeCC
Q psy17902        141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPF--VKTDRKSYPPILALAVANN  201 (454)
Q Consensus       141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~  201 (454)
                      .-...++|+|.|++++|++--..|.|++++..++........  .............|+|+|+
T Consensus        25 ~L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd   87 (450)
T d1crua_          25 NLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD   87 (450)
T ss_dssp             CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred             CCCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence            344578999999999888765579999998777654322211  1111223457889999985

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.17  E-value=3.7  Score=32.83  Aligned_cols=204  Identities=10%  Similarity=0.090  Sum_probs=88.7

Q ss_pred             CcEEEEeCCCccEEee---cccCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEeCCCceeEEEeecc--CCcee
Q psy17902        212 SNIKLWSSSLEHLHTF---TGHKAPITGLAISFECDTLYSSSN---------DRSIKVWNIEDRAYVETLFGH--QSAIT  277 (454)
Q Consensus       212 g~v~vw~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~--~~~v~  277 (454)
                      ..+.+||+....=..+   ......-..+.+  ++..++.|+.         -..+.+||..+......-...  .....
T Consensus        19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~   96 (288)
T d1zgka1          19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIG   96 (288)
T ss_dssp             CCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCE
T ss_pred             ceEEEEECCCCeEEECCCCCCccceeEEEEE--CCEEEEEeCcccCCCCccccchhhhcccccccccccccccceeccee
Confidence            3677888844332222   221212222222  4556666552         235778888766543211101  11111


Q ss_pred             EEEeecCCCEEEEeeCCCc-----EEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCC
Q psy17902        278 SLDILAKNRVISSGGTDKS-----VRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKK  345 (454)
Q Consensus       278 ~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~  345 (454)
                      ++.  .++.+++.++.++.     +..++..+............  -.......+..++.|+.+     ..+..||..+.
T Consensus        97 ~~~--~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~GG~~~~~~~~~~~~~d~~~~  174 (288)
T d1zgka1          97 VGV--IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN  174 (288)
T ss_dssp             EEE--ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred             ccc--cceeeEEecceecccccceeeeeccccCccccccccccccccceeeeeeecceEecCcccccccceEEEeecccc
Confidence            222  25666666655443     34466655544422221111  122233345555555543     45677777654


Q ss_pred             ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902        346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH  420 (454)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~  420 (454)
                      .-...-....        .....++.. ..+.+++.|+.+     ..+.++|..+.... .+...+....-.+++.. ++
T Consensus       175 ~~~~~~~~~~--------~~~~~~~~~-~~~~i~i~GG~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~r~~~~~~~~-~~  243 (288)
T d1zgka1         175 EWRMITAMNT--------IRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH-QG  243 (288)
T ss_dssp             EEEECCCCSS--------CCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE-TT
T ss_pred             cccccccccc--------ccccccccc-eeeeEEEecCccccccccceeeeeecceeee-cccCccCcccceEEEEE-CC
Confidence            3222111100        000112222 245566666554     34677777665332 23222222222233333 56


Q ss_pred             CEEEEEecCCC
Q psy17902        421 KHLVAGIGTEH  431 (454)
Q Consensus       421 ~~l~~~~~~d~  431 (454)
                      +.++.| |.++
T Consensus       244 ~l~v~G-G~~~  253 (288)
T d1zgka1         244 RIYVLG-GYDG  253 (288)
T ss_dssp             EEEEEC-CBCS
T ss_pred             EEEEEe-cCCC
Confidence            666666 5444

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.64  E-value=5.2  Score=33.79  Aligned_cols=138  Identities=9%  Similarity=0.075  Sum_probs=84.5

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-------eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902        144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRS-------KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL  216 (454)
Q Consensus       144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v  216 (454)
                      ...-++.++...+|++|+.++ ++|..+..-.       ....+...    .....|..++|+.+  .|++.. ++.+..
T Consensus        38 ~~~LLAVsn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~----~~ip~v~~vafs~d--~l~v~~-~~~l~~  109 (381)
T d1xipa_          38 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE----KEIPDVIFVCFHGD--QVLVST-RNALYS  109 (381)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE----EECTTEEEEEEETT--EEEEEE-SSEEEE
T ss_pred             ccceEEEeCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceec----cCCCCeEEEEeeCC--EEEEEe-CCCEEE
Confidence            466788888878898888875 5566543210       00011100    11236888999755  455443 456777


Q ss_pred             EeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-----ccCCceeEEEeecCCCEEEE
Q psy17902        217 WSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-----GHQSAITSLDILAKNRVISS  290 (454)
Q Consensus       217 w~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~  290 (454)
                      ++. ..........-..++..+.++|.  .++....+|.+.++++..+.......     .-.+.+.+++|++.+..+++
T Consensus       110 ~~~~~l~~~~~~~~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~  187 (381)
T d1xipa_         110 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDRSFQSFA  187 (381)
T ss_dssp             EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTSCEEEEE
T ss_pred             EEeeccccccccccccccccceecCCc--eeEEEecCCCEEEEEeccCccccccCCcceEEecCCceEEEEeCCcEEEEE
Confidence            877 43444444444567888888775  56777788999999998875432211     12355677777777766666


Q ss_pred             e
Q psy17902        291 G  291 (454)
Q Consensus       291 ~  291 (454)
                      +
T Consensus       188 ~  188 (381)
T d1xipa_         188 W  188 (381)
T ss_dssp             E
T ss_pred             e
Confidence            5

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=88.16  E-value=5.2  Score=31.89  Aligned_cols=221  Identities=15%  Similarity=0.155  Sum_probs=102.1

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C
Q psy17902        142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S  220 (454)
Q Consensus       142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~  220 (454)
                      ...|..|+...  .+.+.-. ||.|..|-.....++....      .....|..++.- +...++.  .||.+..|.. .
T Consensus        25 ~~~i~~va~G~--~h~~al~-dG~v~~wG~N~~GQlG~~~------~~~~~v~~v~~G-~~~~~al--~dg~v~~wG~~~   92 (273)
T d1jtdb_          25 QSGVDAIAGGY--FHGLALK-GGKVLGWGANLNGQLTMPA------ATQSGVDAIAAG-NYHSLAL--KDGEVIAWGGNE   92 (273)
T ss_dssp             SSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTSCCG------GGGSCCCEEEEC-SSEEEEE--ETTEEEEEECCT
T ss_pred             CCCcEEEEccC--CEEEEEE-CCEEEEEeCCCCCceeeee------cccccceEEecC-CCceeee--eeeeeeccCCCc
Confidence            34578887643  3333334 8999999766543332111      122345555442 2223333  3799999986 2


Q ss_pred             CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEe
Q psy17902        221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVW  300 (454)
Q Consensus       221 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~  300 (454)
                      .............+..++....  ..+.. .|+.+..|.................|..++-  ....++ ...++.++.|
T Consensus        93 ~gq~~~~~~~~~~~~~i~~~~~--~~~~~-~dg~v~~~g~~~~~~~~~~~~~~~~v~~~~~--~~~~~~-~~~~g~~~~~  166 (273)
T d1jtdb_          93 DGQTTVPAEARSGVDAIAAGAW--ASYAL-KDGKVIAWGDDSDGQTTVPAEAQSGVTALDG--GVYTAL-AVKNGGVIAW  166 (273)
T ss_dssp             TSTTCCCGGGGSSCCEEEEETT--EEEEE-ETTEEEEEECCTTSTTSCCGGGGSSEEEEEE--CSSEEE-EEETTEEEEE
T ss_pred             ceeeccccccccceeEEeeecc--ccccc-ccccceecccCCCCceeeeccCCceEEEEec--cceeee-eecccceeEe
Confidence            1111111122233444444322  22222 4788999975433221111122234444432  222232 3357788888


Q ss_pred             eccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902        301 KIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV  379 (454)
Q Consensus       301 d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l  379 (454)
                      -....... ........+..+..- ..+.+.-. ||.|+.|=......+... ..        ....|..|+.... ..+
T Consensus       167 G~~~~g~~~~~~~~~~~v~~Is~G-~~h~~~l~-dG~v~~WG~n~~Gql~~~-~~--------~~~~v~~I~~G~~-~~~  234 (273)
T d1jtdb_         167 GDNYFGQTTVPAEAQSGVDDVAGG-IFHSLALK-DGKVIAWGDNRYKQTTVP-TE--------ALSGVSAIASGEW-YSL  234 (273)
T ss_dssp             ECCTTSTTSCCGGGSSSEEEEEEC-SSEEEEEE-TTEEEEEECCTTSTTCCC-GG--------GGSSCCEEEECSS-CEE
T ss_pred             ecccCCcccccccccCCccceecc-ceeeEEEe-cCcEEEcCCCCCCccCCC-cc--------CCCCcEEEEeCcc-eEE
Confidence            65443222 112223344444332 23333333 788988865332221110 00        0111555654332 233


Q ss_pred             EEecCCCcEEEEEcC
Q psy17902        380 ASGSYDGCVKLWKIT  394 (454)
Q Consensus       380 ~~~~~dg~v~iwd~~  394 (454)
                      +.  .||.|..|-..
T Consensus       235 ~l--~~g~v~~WG~~  247 (273)
T d1jtdb_         235 AL--KNGKVIAWGSS  247 (273)
T ss_dssp             EE--ETTEEEEESTT
T ss_pred             EE--ECCEEEEECCC
Confidence            33  37999999543

>d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Soluble quinoprotein glucose dehydrogenase
family: Soluble quinoprotein glucose dehydrogenase
domain: Soluble quinoprotein glucose dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=85.94  E-value=10  Score=32.88  Aligned_cols=36  Identities=8%  Similarity=-0.092  Sum_probs=28.5

Q ss_pred             CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902        273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL  308 (454)
Q Consensus       273 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~  308 (454)
                      -...++|+|.|++++|++--..|.|++++..++...
T Consensus        26 L~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~   61 (450)
T d1crua_          26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK   61 (450)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred             CCCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEe
Confidence            345689999999998887645799999988776654

>d1wp5a_ b.68.10.1 (A:) Topoisomerase IV subunit A, ParC, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: GyrA/ParC C-terminal domain-like
family: GyrA/ParC C-terminal domain-like
domain: Topoisomerase IV subunit A, ParC, C-terminal domain
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.70  E-value=12  Score=30.58  Aligned_cols=232  Identities=11%  Similarity=0.086  Sum_probs=121.6

Q ss_pred             CCCcEEEEecCCCcEEEEeC-----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe---CCC------cee
Q psy17902        200 NNNELVASGDNNSNIKLWSS-----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN---IED------RAY  265 (454)
Q Consensus       200 ~~~~~l~~~~~dg~v~vw~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd---~~~------~~~  265 (454)
                      |+...+++-+.+|.|+--.+     ....-..++ -.+.+..+........|+.-+..|.++...   +..      |..
T Consensus         3 ~~E~v~v~lS~~GyiKR~~~~~~~~~~~~~~~~k-~~D~v~~~~~~~t~d~ll~fT~~Grvy~l~v~eiP~~~~~s~G~p   81 (323)
T d1wp5a_           3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH   81 (323)
T ss_dssp             SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred             CCCCEEEEEeCCCeEEEeeHHHhhhcCCCCCccc-CCceEEEEEEEcCCCEEEEEecCCEEEEEeeccCccccccccccc
Confidence            45667788888898876554     111111122 234455555555556677777888766544   432      333


Q ss_pred             EEEee--ccCCceeEEEeec---CCCEEEEeeCCCcEEEeeccCCe-------EE--EEccccCCeEEEEecCCCEEEEE
Q psy17902        266 VETLF--GHQSAITSLDILA---KNRVISSGGTDKSVRVWKIQEES-------QL--VFNGHSRGIDMTRRVNDQQFITC  331 (454)
Q Consensus       266 ~~~~~--~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~-------~~--~~~~~~~~i~~~~~~~~~~l~~~  331 (454)
                      +..+.  .....+..+...+   ...+|+..+..|.++...+....       ..  .+......+..........++.+
T Consensus        82 i~~ll~l~~~e~ii~~~~~~~~~~~~~l~~~Tk~G~iKr~~l~~f~~~~~~~g~~~i~L~~~D~l~~v~~~~~~~~i~l~  161 (323)
T d1wp5a_          82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV  161 (323)
T ss_dssp             GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred             ceeeecccCCcceEEEeeccccccceeEEEEeehhheeeccHHHhhhhhccchhhhccccccccccceeccCCCeEEEEE
Confidence            32221  1233444333322   35678888999999998874321       11  22222233344444556788889


Q ss_pred             eCCCCEEEEecCCCccceeeecc-cCCCCCCCCCCcEEEE-EEecCCCEEEEecCCCcEEEEEcCCCc-------eeeEe
Q psy17902        332 GEDGTLSLWSILKKVPTHTIPVA-HGYDSSSSEPNWITSV-ACLHNSDLVASGSYDGCVKLWKITPKR-------TLEFL  402 (454)
Q Consensus       332 ~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~v~iwd~~~~~-------~~~~~  402 (454)
                      +..|.+..|+...-.+...-... .....  .....+.++ ...+++..|++.+..|..+.-.+...+       -+..+
T Consensus       162 t~~G~~lrf~~~~vr~~gr~a~GV~~ikL--~~~D~vv~~~~~~~~~~~ll~~T~~G~gKr~~~~e~~~~~RggkGv~~~  239 (323)
T d1wp5a_         162 THNGYALWFDESEVSIVGVRAAGVKGMNL--KEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTEFEKATRAKRGVVIL  239 (323)
T ss_dssp             ETTSEEEEEEGGGSCBCCSSCCCEECCCC--CTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGGSCCCCTTSCCEECS
T ss_pred             EecceeeEeecccccccCccccccccccc--ccccccchhhhccccccceeeeeeeheeecccchhhccccccccccccc
Confidence            99999999987543222111000 00000  122335544 444566788888889988887664321       12222


Q ss_pred             ccCC-CceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902        403 QDIP-LSGVINSLVFTSDHKHLVAGIGTEHRFGR  435 (454)
Q Consensus       403 ~~~~-~~~~v~~l~~s~d~~~l~~~~~~d~~i~~  435 (454)
                      .... ....|..+....+...|+.. ...|.+..
T Consensus       240 k~~k~~~~~v~~~~~~~~~d~l~l~-T~~g~~~r  272 (323)
T d1wp5a_         240 RELKANPHRISGFVVAQDSDTIYLQ-TEKSFIET  272 (323)
T ss_dssp             CCCSSSCCCEEEEEEECTTCEEEEE-ETTSCEEE
T ss_pred             cccccccceeeeeEecCCCCEEEEE-eCCCEEEE
Confidence            2211 22345555555555555554 35666543