Psyllid ID: psy18016

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MQSTINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Secondary Structure (PSIPRED)
cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cccEEEEHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mqstinyesmqryvspvnpaifPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Flexible Loop (DISEMBL)
mqstinyesmQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Low Complexity Region (SEG)
MQSTINYESMQRYVSPVNPAIFPHltilllgigifftAWFFVYEVTSTKLSRDLVKELVIALVAAlfsgfgtlflllW
Disordered region (IsUnstruct)
**********QRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Disordered Region (DISOPRED)
*********MQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Disordered Region (DISEMBL)
********SMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Disordered Region (DISPRO)
**STINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MQSTINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q32P84	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.760	1e-26
P61166	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.760	2e-26
P61165	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.760	2e-26
Q76LT9	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.760	2e-26
Q6DDB3	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.760	2e-26
Q6GP81	79	Transmembrane protein 258	N/A	N/A	0.910	0.898	0.760	2e-26
Q6PBS6	79	Transmembrane protein 258	yes	N/A	0.910	0.898	0.746	2e-25
Q9VVA8	78	Transmembrane protein 258	yes	N/A	0.884	0.884	0.625	2e-17
Q965T1	79	Transmembrane protein 258	yes	N/A	0.948	0.936	0.486	4e-13
Q60WL8	79	Transmembrane protein 258	N/A	N/A	0.948	0.936	0.432	9e-08

>sp|Q32P84|TM258_BOVIN Transmembrane protein 258 OS=Bos taurus GN=TMEM258 PE=3 SV=1

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Bos taurus (taxid: 9913)

>sp|P61166|TM258_MOUSE Transmembrane protein 258 OS=Mus musculus GN=Tmem258 PE=2 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Mus musculus (taxid: 10090)

>sp|P61165|TM258_HUMAN Transmembrane protein 258 OS=Homo sapiens GN=TMEM258 PE=1 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Homo sapiens (taxid: 9606)

>sp|Q76LT9|TM258_CHICK Transmembrane protein 258 OS=Gallus gallus GN=TMEM258 PE=3 SV=1

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Gallus gallus (taxid: 9031)

>sp|Q6DDB3|TM258_XENTR Transmembrane protein 258 OS=Xenopus tropicalis GN=tmem258 PE=3 SV=1

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDVYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Xenopus tropicalis (taxid: 8364)

>sp|Q6GP81|TM258_XENLA Transmembrane protein 258 OS=Xenopus laevis GN=tmem258 PE=3 SV=1

 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 4  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDVYKELLISLVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 64 MGFGVLFLLLW 74

Xenopus laevis (taxid: 8355)

>sp|Q6PBS6|TM258_DANRE Transmembrane protein 258 OS=Danio rerio GN=tmem258 PE=3 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 62/71 (87%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E+M RY SPVNPA+FPHLT++LL IG+FF AWFFVYEVTSTK +RD+ KEL+IALVA+LF
Sbjct: 4  EAMTRYTSPVNPAVFPHLTVVLLAIGMFFKAWFFVYEVTSTKYTRDVYKELLIALVASLF 63

Query: 68 SGFGTLFLLLW 78
           GFG  FLLLW
Sbjct: 64 MGFGVHFLLLW 74

Danio rerio (taxid: 7955)

>sp|Q9VVA8|TM258_DROME Transmembrane protein 258 homolog OS=Drosophila melanogaster GN=CG9669 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 58/72 (80%), Gaps = 3/72 (4%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRD--LVKELVIALVAA 65
          + MQRYVSPVNPA+FPHL  +LL IG FFTAWFF++ V S K S++  L+KEL+I+L A+
Sbjct: 2  DVMQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCAS 60

Query: 66 LFSGFGTLFLLL 77
          +F GFG +FLLL
Sbjct: 61 IFLGFGIVFLLL 72

Drosophila melanogaster (taxid: 7227)

>sp|Q965T1|TM258_CAEEL Transmembrane protein 258 homolog OS=Caenorhabditis elegans GN=Y57E12AM.1 PE=3 SV=1

 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 51/74 (68%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          ++   M RY +PVN A  P LT  L G+G+   A F + +VTSTK +R+L+KEL IA  +
Sbjct: 1  MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query: 65 ALFSGFGTLFLLLW 78
          ++F GFG++FLLLW
Sbjct: 61 SVFLGFGSVFLLLW 74

Caenorhabditis elegans (taxid: 6239)

>sp|Q60WL8|TM258_CAEBR Transmembrane protein 258 homolog OS=Caenorhabditis briggsae GN=CBG19073 PE=3 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 50/74 (67%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          ++   M RY +PV+ +  P L  +L G+G+   A F + +VTSTK +R++ KEL IA  +
Sbjct: 1  MDISKMDRYAAPVHFSSLPLLATVLCGVGLLLLAAFTMLQVTSTKYNRNVFKELFIAATS 60

Query: 65 ALFSGFGTLFLLLW 78
          ++F GFG++FLLLW
Sbjct: 61 SIFLGFGSVFLLLW 74

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
242022322	85	conserved hypothetical protein [Pediculu	1.0	0.917	0.756	8e-27
342905930	83	hypothetical protein [Rhodnius prolixus]	1.0	0.939	0.705	1e-26
307167481	79	Protein NEF1 [Camponotus floridanus]	0.948	0.936	0.783	3e-26
328777442	80	PREDICTED: UPF0197 transmembrane protein	0.948	0.925	0.783	5e-26
383866143	80	PREDICTED: UPF0197 transmembrane protein	0.948	0.925	0.770	7e-26
350406341	80	PREDICTED: UPF0197 transmembrane protein	0.948	0.925	0.770	9e-26
307192882	79	Protein NEF1 [Harpegnathos saltator]	0.948	0.936	0.770	1e-25
344295674	131	PREDICTED: UPF0197 transmembrane protein	1.0	0.595	0.692	2e-25
126344552	238	PREDICTED: hypothetical protein LOC10002	0.974	0.319	0.723	2e-25
73983490	120	PREDICTED: UPF0197 transmembrane protein	0.910	0.591	0.760	3e-25

>gi|242022322|ref|XP_002431589.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212516897|gb|EEB18851.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  124 bits (310), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 59/78 (75%), Positives = 67/78 (85%)

Query: 1  MQSTINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVI 60
          +   +  ESM RYVSPVNPA+FPHLTI+LLGIGIFFTAWFFVYEVTS K +R+L KEL++
Sbjct: 3  LSDKVELESMSRYVSPVNPAVFPHLTIVLLGIGIFFTAWFFVYEVTSPKNTRNLFKELLV 62

Query: 61 ALVAALFSGFGTLFLLLW 78
          ALVAA FSGFG LFLLLW
Sbjct: 63 ALVAAFFSGFGVLFLLLW 80

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|342905930|gb|AEL79248.1| hypothetical protein [Rhodnius prolixus]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 69/78 (88%)

Query: 1  MQSTINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVI 60
          M  ++  E M RYVSP+NPA+FPHLT++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL++
Sbjct: 1  MDRSVGIELMSRYVSPINPAVFPHLTLILLGIGIFFTAWFFVYEVTSTKFTRDIFKELLV 60

Query: 61 ALVAALFSGFGTLFLLLW 78
          +LVA++F+GFG LFLLLW
Sbjct: 61 SLVASIFTGFGVLFLLLW 78

Source: Rhodnius prolixus

Species: Rhodnius prolixus

Genus: Rhodnius

Family: Reduviidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167481|gb|EFN61054.1| Protein NEF1 [Camponotus floridanus]

 Score =  122 bits (306), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 66/74 (89%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          +  ESM RYVSPVNPA+FP L ++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL+I+LVA
Sbjct: 1  VEIESMTRYVSPVNPAVFPLLAVVLLGIGIFFTAWFFVYEVTSTKFTRDICKELLISLVA 60

Query: 65 ALFSGFGTLFLLLW 78
          ALFSGFG LFLLLW
Sbjct: 61 ALFSGFGVLFLLLW 74

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328777442|ref|XP_003249342.1| PREDICTED: UPF0197 transmembrane protein C11orf10 homolog [Apis mellifera] gi|380019671|ref|XP_003693726.1| PREDICTED: UPF0197 transmembrane protein C11orf10 homolog [Apis florea]

 Score =  121 bits (304), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 66/74 (89%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          +  ESM RYVSP+NPAIFP L ++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL+I+LVA
Sbjct: 2  VEVESMTRYVSPINPAIFPLLAVVLLGIGIFFTAWFFVYEVTSTKFTRDMFKELLISLVA 61

Query: 65 ALFSGFGTLFLLLW 78
          ALFSGFG LFLLLW
Sbjct: 62 ALFSGFGILFLLLW 75

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866143|ref|XP_003708531.1| PREDICTED: UPF0197 transmembrane protein C11orf10 homolog [Megachile rotundata]

 Score =  120 bits (302), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 66/74 (89%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          +  ESM RYVSP+NPAIFP L ++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL+I+LVA
Sbjct: 2  VEIESMTRYVSPINPAIFPLLAVVLLGIGIFFTAWFFVYEVTSTKFTRDMFKELLISLVA 61

Query: 65 ALFSGFGTLFLLLW 78
          A+FSGFG LFLLLW
Sbjct: 62 AIFSGFGVLFLLLW 75

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406341|ref|XP_003487739.1| PREDICTED: UPF0197 transmembrane protein C11orf10 homolog [Bombus impatiens]

 Score =  120 bits (301), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 66/74 (89%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          +  ESM RYVSP+NPAIFP L ++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL+I+LVA
Sbjct: 2  VEIESMTRYVSPINPAIFPLLAVVLLGIGIFFTAWFFVYEVTSTKFTRDMFKELLISLVA 61

Query: 65 ALFSGFGTLFLLLW 78
          A+FSGFG LFLLLW
Sbjct: 62 AIFSGFGILFLLLW 75

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307192882|gb|EFN75910.1| Protein NEF1 [Harpegnathos saltator]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/74 (77%), Positives = 66/74 (89%)

Query: 5  INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVA 64
          +  ESM RYVSPVNPA+FP L ++LLGIGIFFTAWFFVYEVTSTK +RD+ KEL+I+LVA
Sbjct: 1  VEIESMTRYVSPVNPAVFPLLAVVLLGIGIFFTAWFFVYEVTSTKFTRDIFKELLISLVA 60

Query: 65 ALFSGFGTLFLLLW 78
          A+FSGFG LFLLLW
Sbjct: 61 AIFSGFGVLFLLLW 74

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|344295674|ref|XP_003419536.1| PREDICTED: UPF0197 transmembrane protein C11orf10 homolog [Loxodonta africana]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/78 (69%), Positives = 66/78 (84%)

Query: 1   MQSTINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVI 60
           +   +  E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I
Sbjct: 49  LSCKMELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLI 108

Query: 61  ALVAALFSGFGTLFLLLW 78
           +LVA+LF GFG LFLLLW
Sbjct: 109 SLVASLFMGFGVLFLLLW 126

Source: Loxodonta africana

Species: Loxodonta africana

Genus: Loxodonta

Family: Elephantidae

Order: Proboscidea

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|126344552|ref|XP_001378524.1| PREDICTED: hypothetical protein LOC100028506 [Monodelphis domestica]

 Score =  119 bits (299), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/76 (72%), Positives = 66/76 (86%)

Query: 3   STINYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIAL 62
           S +  E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+L
Sbjct: 158 SKMELEAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISL 217

Query: 63  VAALFSGFGTLFLLLW 78
           VA+LF GFG LFLLLW
Sbjct: 218 VASLFMGFGVLFLLLW 233

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|73983490|ref|XP_853757.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like isoform 2 [Canis lupus familiaris]

 Score =  119 bits (297), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/71 (76%), Positives = 64/71 (90%)

Query: 8   ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
           E+M RY SPVNPA+FPHLT++LL IG+FFTAWFFVYEVTSTK +RD+ KEL+I+LVA+LF
Sbjct: 45  EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVASLF 104

Query: 68  SGFGTLFLLLW 78
            GFG LFLLLW
Sbjct: 105 MGFGVLFLLLW 115

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
UNIPROTKB|Q76LT9	79	TMEM258 "Transmembrane protein	0.743	0.734	0.586	6.2e-14
UNIPROTKB|Q32P84	79	TMEM258 "Transmembrane protein	0.743	0.734	0.586	6.2e-14
UNIPROTKB|P61165	79	TMEM258 "Transmembrane protein	0.743	0.734	0.586	6.2e-14
MGI|MGI:1916288	79	Tmem258 "transmembrane protein	0.743	0.734	0.586	6.2e-14
ZFIN|ZDB-GENE-040426-1739	79	tmem258 "transmembrane protein	0.743	0.734	0.603	6.2e-14
FB|FBgn0036667	78	CG9669 [Drosophila melanogaste	0.705	0.705	0.5	1.4e-09
WB|WBGene00021960	79	Y57E12AM.1 [Caenorhabditis ele	0.782	0.772	0.360	0.00021

UNIPROTKB|Q76LT9 TMEM258 "Transmembrane protein 258" [Gallus gallus (taxid:9031)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 34/58 (58%), Positives = 41/58 (70%)

Query:     8 ESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVAA 65
             E+M RY SPVNPA+FPH             AWFFVYEVTSTK +RD+ KEL+I+LVA+
Sbjct:     4 EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVAS 61

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q32P84 TMEM258 "Transmembrane protein 258" [Bos taurus (taxid:9913)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 34/58 (58%), Positives = 41/58 (70%)

Query:     8 ESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVAA 65
             E+M RY SPVNPA+FPH             AWFFVYEVTSTK +RD+ KEL+I+LVA+
Sbjct:     4 EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVAS 61

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P61165 TMEM258 "Transmembrane protein 258" [Homo sapiens (taxid:9606)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 34/58 (58%), Positives = 41/58 (70%)

Query:     8 ESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVAA 65
             E+M RY SPVNPA+FPH             AWFFVYEVTSTK +RD+ KEL+I+LVA+
Sbjct:     4 EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVAS 61

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:1916288 Tmem258 "transmembrane protein 258" [Mus musculus (taxid:10090)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 34/58 (58%), Positives = 41/58 (70%)

Query:     8 ESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVAA 65
             E+M RY SPVNPA+FPH             AWFFVYEVTSTK +RD+ KEL+I+LVA+
Sbjct:     4 EAMSRYTSPVNPAVFPHLTVVLLAIGMFFTAWFFVYEVTSTKYTRDIYKELLISLVAS 61

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-040426-1739 tmem258 "transmembrane protein 258" [Danio rerio (taxid:7955)]

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 35/58 (60%), Positives = 41/58 (70%)

Query:     8 ESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVAA 65
             E+M RY SPVNPA+FPH             AWFFVYEVTSTK +RD+ KEL+IALVA+
Sbjct:     4 EAMTRYTSPVNPAVFPHLTVVLLAIGMFFKAWFFVYEVTSTKYTRDVYKELLIALVAS 61

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

FB|FBgn0036667 CG9669 [Drosophila melanogaster (taxid:7227)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/58 (50%), Positives = 38/58 (65%)

Query:    10 MQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRD--LVKELVIALVAA 65
             MQRYVSPVNPA+FPH             AWFF++ V S K S++  L+KEL+I+L A+
Sbjct:     4 MQRYVSPVNPAVFPHLATVLLVIGTFFTAWFFIF-VVSRKSSKESTLIKELLISLCAS 60

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

WB|WBGene00021960 Y57E12AM.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 22/61 (36%), Positives = 32/61 (52%)

Query:     5 INYESMQRYVSPVNPAIFPHXXXXXXXXXXXXXAWFFVYEVTSTKLSRDLVKELVIALVA 64
             ++   M RY +PVN A  P              A F + +VTSTK +R+L+KEL IA  +
Sbjct:     1 MDISKMNRYTAPVNFASLPLLTTFLCGVGLLLLATFTMIQVTSTKYNRNLLKELFIAATS 60

Query:    65 A 65
             +
Sbjct:    61 S 61


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.131   0.405    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       78        53   0.00091  102 3  11 22  0.37    27
                                                     29  0.50    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  376 (40 KB)
  Total size of DFA:  65 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  4.91u 0.11s 5.02t   Elapsed:  00:00:01
  Total cpu time:  4.91u 0.12s 5.03t   Elapsed:  00:00:01
  Start:  Thu Aug 15 16:34:33 2013   End:  Thu Aug 15 16:34:34 2013

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P61165	TM258_HUMAN	No assigned EC number	0.7605	0.9102	0.8987	yes	N/A
P61166	TM258_MOUSE	No assigned EC number	0.7605	0.9102	0.8987	yes	N/A
Q32P84	TM258_BOVIN	No assigned EC number	0.7605	0.9102	0.8987	yes	N/A
Q965T1	TM258_CAEEL	No assigned EC number	0.4864	0.9487	0.9367	yes	N/A
Q6DDB3	TM258_XENTR	No assigned EC number	0.7605	0.9102	0.8987	yes	N/A
Q76LT9	TM258_CHICK	No assigned EC number	0.7605	0.9102	0.8987	yes	N/A
Q6GP81	TM258_XENLA	No assigned EC number	0.7605	0.9102	0.8987	N/A	N/A
Q6PBS6	TM258_DANRE	No assigned EC number	0.7464	0.9102	0.8987	yes	N/A
Q9VVA8	TM258_DROME	No assigned EC number	0.625	0.8846	0.8846	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	78
pfam05251	77	pfam05251, UPF0197, Uncharacterized protein family	2e-30

>gnl|CDD|147446 pfam05251, UPF0197, Uncharacterized protein family (UPF0197)

 Score =  101 bits (253), Expect = 2e-30
 Identities = 55/71 (77%), Positives = 61/71 (85%)

Query: 8  ESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALF 67
          E MQRYVSPVNPA+FPHL  +LLGIG FFTAWFFVYEVTSTK  R L KEL+I+LVA++F
Sbjct: 2  EKMQRYVSPVNPAVFPHLATVLLGIGTFFTAWFFVYEVTSTKYERVLFKELLISLVASIF 61

Query: 68 SGFGTLFLLLW 78
           GFG LFLLLW
Sbjct: 62 LGFGILFLLLW 72

This family of proteins is functionally uncharacterized. Length = 77

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
PF05251	77	UPF0197: Uncharacterised protein family (UPF0197);	100.0
KOG4452|consensus	79		100.0
cd06550	261	TM_ABC_iron-siderophores_like Transmembrane subuni	82.02

>PF05251 UPF0197: Uncharacterised protein family (UPF0197); InterPro: IPR007915 This family of proteins is functionally uncharacterised, but is thought to be a transmembrane protein

Probab=100.00  E-value=1.2e-40  Score=214.94  Aligned_cols=72  Identities=72%  Similarity=1.306  Sum_probs=71.0

Q ss_pred             ccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy18016          7 YESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW   78 (78)
Q Consensus         7 ~~~m~~y~sPV~pa~yP~La~vLL~iGl~fta~FfiyevT~~k~~r~l~KEl~ia~vAS~flGfG~lFllLw   78 (78)
                      +|+|+||+|||||++||+||++||+||++++|||||||+|++|++||++||+++|++||+|+|||++|++||
T Consensus         1 ~~~m~~Y~sPV~p~~~p~La~vll~iGl~fta~Ffiyevts~k~~r~i~kEl~~a~vAS~flGfG~lFLlL~   72 (77)
T PF05251_consen    1 IESMSRYTSPVNPALYPHLAVVLLAIGLFFTAWFFIYEVTSTKKTRSIAKELLIALVASLFLGFGSLFLLLW   72 (77)
T ss_pred             CCcccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999999999999999999

>KOG4452|consensus

Probab=100.00  E-value=1.1e-40  Score=214.62  Aligned_cols=74  Identities=65%  Similarity=1.232  Sum_probs=73.5

Q ss_pred             ccccccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhC
Q psy18016          5 INYESMQRYVSPVNPAIFPHLTILLLGIGIFFTAWFFVYEVTSTKLSRDLVKELVIALVAALFSGFGTLFLLLW   78 (78)
Q Consensus         5 m~~~~m~~y~sPV~pa~yP~La~vLL~iGl~fta~FfiyevT~~k~~r~l~KEl~ia~vAS~flGfG~lFllLw   78 (78)
                      ||+++|+||+|||||++||||+.+||+||++|+||||++|||++|++||+.||++++++||+|+|||++|++||
T Consensus         1 m~~~~M~RYtsPVNpAvfPhLttvLl~iG~fftAwFf~~~VtStKy~r~l~KELlIsl~aSvFlGFG~vFLLLw   74 (79)
T KOG4452|consen    1 MDISKMNRYTSPVNPAVFPHLTTVLLGIGLFFTAWFFMIQVTSTKYNRNLLKELLISLTASVFLGFGSVFLLLW   74 (79)
T ss_pred             CchHHHhhhcCCCChhHhHHHHHHHHHHHHHHHHHHHheeEecchhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999

>cd06550 TM_ABC_iron-siderophores_like Transmembrane subunit (TM), of Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters involved in the uptake of siderophores, heme, vitamin B12, or the divalent cations Mg2+ and Zn2+

Probab=82.02  E-value=11  Score=27.38  Aligned_cols=29  Identities=21%  Similarity=0.306  Sum_probs=25.2

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy18016         49 KLSRDLVKELVIALVAALFSGFGTLFLLL   77 (78)
Q Consensus        49 k~~r~l~KEl~ia~vAS~flGfG~lFllL   77 (78)
                      |+.++..+|..++.+-+.+++.|+.++-.
T Consensus        78 ~~~~~~~~~~~iGi~~~~~~~~~~~~ls~  106 (261)
T cd06550          78 RGGLSPSKLILIGIVLSAFFSAGVILISL  106 (261)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence            55778999999999999999999988643

PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The TMs are bundles of alpha helices that transverse the cytoplasmic membrane multiple times. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Each TM has a prominent cytoplasmic loop which contacts an ABC and represents a conserved motif. The two TMs form either a homodimer (e.g. in the case of the BtuC subunits of the Escherichia coli BtuCD vitamin B12 transporter), a heterodimer (e.g. the TroC and TroD subunits of the Treponema pallidum general transition metal

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00