Psyllid ID: psy2085
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | 2.2.26 [Sep-21-2011] | |||||||
| Q802W4 | 722 | Nucleolar protein 10 OS=D | yes | N/A | 0.438 | 0.217 | 0.656 | 4e-53 | |
| Q7T0Q5 | 689 | Nucleolar protein 10 OS=X | N/A | N/A | 0.430 | 0.223 | 0.634 | 8e-51 | |
| Q66H99 | 688 | Nucleolar protein 10 OS=R | yes | N/A | 0.438 | 0.228 | 0.631 | 6e-48 | |
| Q5RJG1 | 687 | Nucleolar protein 10 OS=M | yes | N/A | 0.438 | 0.228 | 0.631 | 7e-48 | |
| Q9BSC4 | 688 | Nucleolar protein 10 OS=H | yes | N/A | 0.438 | 0.228 | 0.631 | 7e-48 | |
| Q6NVM6 | 686 | Nucleolar protein 10 OS=X | yes | N/A | 0.421 | 0.220 | 0.634 | 4e-47 | |
| O74879 | 634 | Ribosome biogenesis prote | yes | N/A | 0.427 | 0.241 | 0.465 | 1e-38 | |
| P48234 | 707 | Ribosome biogenesis prote | yes | N/A | 0.416 | 0.210 | 0.395 | 2e-24 |
| >sp|Q802W4|NOL10_DANRE Nucleolar protein 10 OS=Danio rerio GN=nol10 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/160 (65%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN +YDDYKFVTR++LE LGL HLIG+ LLRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTIYDDYKFVTRKDLESLGLAHLIGSPLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKLM+E
Sbjct: 404 MDIRLYHKVKTMVNPFAYEEYRKDKIRQKIEESRAQRVQLKKLPKVNKELALKLMEEDT- 462
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
E ++KKKKK ++ NLL DDRF +FENPD+QV E S
Sbjct: 463 --ELTNKKKKKKANVAGNLLMDDRFKVMFENPDYQVDERS 500
|
Danio rerio (taxid: 7955) |
| >sp|Q7T0Q5|NOL10_XENLA Nucleolar protein 10 OS=Xenopus laevis GN=nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 127/156 (81%), Gaps = 2/156 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVTR+EL++LGL HLIG+ +LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPENTVYDDYKFVTRKELDELGLSHLIGSPMLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE+KK+KIR++IE+ R + VQ+ KLPKVN+ELALKL +++++
Sbjct: 404 MDIRLYHKVKAMVNPFAYEEYKKEKIRQKIEETRAQRVQIKKLPKVNKELALKLYEDEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQV 349
++ +KKK+K N+L DDRF +FENPDFQV
Sbjct: 464 EKQLSKKKKKQKKM--PNILTDDRFKVMFENPDFQV 497
|
Xenopus laevis (taxid: 8355) |
| >sp|Q66H99|NOL10_RAT Nucleolar protein 10 OS=Rattus norvegicus GN=Nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (486), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTLKKKVKSL---PNILTDDRFKVMFENPDFQVDEDS 500
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q5RJG1|NOL10_MOUSE Nucleolar protein 10 OS=Mus musculus GN=Nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTLKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 500
|
Mus musculus (taxid: 10090) |
| >sp|Q9BSC4|NOL10_HUMAN Nucleolar protein 10 OS=Homo sapiens GN=NOL10 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 101/160 (63%), Positives = 127/160 (79%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
+++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 464 KQKSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 500
|
Homo sapiens (taxid: 9606) |
| >sp|Q6NVM6|NOL10_XENTR Nucleolar protein 10 OS=Xenopus tropicalis GN=nol10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 119/156 (76%), Gaps = 5/156 (3%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLDNLTEELEEN VYDDYKFVTR+EL++LGL HLIG+ LLRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTRKELDELGLSHLIGSPLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ PF +EE+KK+KIR++IE+ R + VQ+ KLPKVN K + K
Sbjct: 404 MDIRLYHKVKAMVNPFAYEEYKKEKIRQKIEEARAQRVQIKKLPKVN-----KELALKLY 458
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQV 349
EE E +KKKK + N+L DDRF +FENPDFQV
Sbjct: 459 EEEEELSQKKKKQKKMPNILSDDRFKVMFENPDFQV 494
|
Xenopus tropicalis (taxid: 8364) |
| >sp|O74879|NOL10_SCHPO Ribosome biogenesis protein enp2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=enp2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 111/159 (69%), Gaps = 6/159 (3%)
Query: 193 NLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGF 252
+L PAP+WC FLDN+TEE+EEN +YDDYKFVT++EL +LGL HL+GT ++RAYMHGF
Sbjct: 355 SLNPAPRWCSFLDNITEEMEENPAPTIYDDYKFVTKKELLNLGLDHLVGTGVIRAYMHGF 414
Query: 253 FMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQ 312
F+D LY KA+ ++ PF +EE ++K ++ER+E++R ++ PKVN LA +L ++
Sbjct: 415 FIDNNLYEKARLIANPFSYEEHRQKIVKERLEKQRASKIRSQNRPKVNAGLASRLSYQEN 474
Query: 313 KAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIE 351
K +KK + ++LED+RF +F + +F+V E
Sbjct: 475 KL------RKKTGVTDGPSILEDERFKNVFTDKEFEVDE 507
|
May be involved in rRNA-processing and ribosome biosynthesis. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P48234|NOL10_YEAST Ribosome biogenesis protein ENP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENP2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 104/167 (62%), Gaps = 18/167 (10%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGP+P+WC FLD++TEELEE + VY +Y+F+TR +++ L L HL+G+ +LRAYMHGFF
Sbjct: 346 LGPSPRWCSFLDSITEELEEKPSDTVYSNYRFITRDDVKKLNLTHLVGSRVLRAYMHGFF 405
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQE-----RTRGVQLNKLPKVNQELALKLM 308
++ LY K ++ P +++ ++++IR RIE+E R+ G KVN+ L KL
Sbjct: 406 INTELYDKVSLIANPDAYKDEREREIRRRIEKERESRIRSSGAVQKPKIKVNKTLVDKL- 464
Query: 309 DEKQKAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+K+ +++ +L DDRF ++FE+ +FQV E D
Sbjct: 465 ------------SQKRGDKVAGKVLTDDRFKEMFEDEEFQVDEDDYD 499
|
May be involved in rRNA-processing and ribosome biosynthesis. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | ||||||
| 332247294 | 638 | PREDICTED: nucleolar protein 10 isoform | 0.893 | 0.501 | 0.408 | 2e-68 | |
| 10436444 | 638 | unnamed protein product [Homo sapiens] | 0.893 | 0.501 | 0.406 | 1e-67 | |
| 402890084 | 638 | PREDICTED: nucleolar protein 10 isoform | 0.893 | 0.501 | 0.403 | 1e-66 | |
| 189237612 | 624 | PREDICTED: similar to nucleolar protein | 0.692 | 0.397 | 0.533 | 9e-66 | |
| 426223134 | 638 | PREDICTED: nucleolar protein 10 isoform | 0.698 | 0.391 | 0.471 | 6e-56 | |
| 386869309 | 638 | nucleolar protein 10 isoform 3 [Homo sap | 0.698 | 0.391 | 0.471 | 9e-56 | |
| 410955828 | 638 | PREDICTED: nucleolar protein 10 isoform | 0.698 | 0.391 | 0.467 | 3e-55 | |
| 109102011 | 638 | PREDICTED: nucleolar protein 10 isoform | 0.698 | 0.391 | 0.467 | 4e-55 | |
| 50745027 | 688 | PREDICTED: nucleolar protein 10 [Gallus | 0.438 | 0.228 | 0.65 | 4e-54 | |
| 449283682 | 688 | Nucleolar protein 10 [Columba livia] | 0.438 | 0.228 | 0.65 | 4e-54 |
| >gi|332247294|ref|XP_003272790.1| PREDICTED: nucleolar protein 10 isoform 2 [Nomascus leucogenys] | Back alignment and taxonomy information |
|---|
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/416 (40%), Positives = 222/416 (53%), Gaps = 96/416 (23%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRV-------------RCYETDN 77
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRV RC +++
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 78 LSM----------------------------------KFERCFD--------------SE 89
++ KF R F SE
Sbjct: 98 VTFEILSDDYSKIVFLHNDRYIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSE 157
Query: 90 VVTFEILSDDY-------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142
V + Y ++E N IN VH L GTIEG+VE WDPR + + G LDCA
Sbjct: 158 VYRLNLEQGRYLNPLQTDAAENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCA 217
Query: 143 FNCISNERDTEE-------------------KEGKASSDESSEEEEEEEEEEESSDDDQA 183
N ++ + + G+ S E E + + +
Sbjct: 218 LNSVTADSEINSLPTISALKFNGALTMAVGTTTGQGKIFTSLEPEHDLNDVCLYPNSGML 277
Query: 184 WTKE------IKKTYNLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLG 237
T I LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL
Sbjct: 278 LTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLT 337
Query: 238 HLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLP 297
HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLP
Sbjct: 338 HLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLP 397
Query: 298 KVNQELALKLMDEKQKAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
KVN+ELALKL++E+++ +++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 398 KVNKELALKLIEEEEEKQKSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 450
|
Source: Nomascus leucogenys Species: Nomascus leucogenys Genus: Nomascus Family: Hylobatidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|10436444|dbj|BAB14836.1| unnamed protein product [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/416 (40%), Positives = 221/416 (53%), Gaps = 96/416 (23%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRV-------------RCYETDN 77
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRV RC +++
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 78 LSM----------------------------------KFERCFD--------------SE 89
++ KF R F SE
Sbjct: 98 VTFEILSDDYSKIVFLHNDRYIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSE 157
Query: 90 VVTFEILSDDY-------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142
V + Y ++E N IN VH L GTIEG+VE WDPR + + G LDCA
Sbjct: 158 VYRLNLEQGRYLNPLQTDAAENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCA 217
Query: 143 FNCISNERDTEE-------------------KEGKASSDESSEEEEEEEEEEESSDDDQA 183
N ++ + + G+ S E E + + +
Sbjct: 218 LNSVTADSEINSLPTISALKFNGALTMAVGTTTGQGKIFTSLEPEHDLNDVCLYPNSGML 277
Query: 184 WTKE------IKKTYNLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLG 237
T I LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL
Sbjct: 278 LTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLT 337
Query: 238 HLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLP 297
HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLP
Sbjct: 338 HLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLP 397
Query: 298 KVNQELALKLMDEKQKAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
KVN+ELALKL++E+++ +++ +KK K L N+L DDRF +FENPD QV E S
Sbjct: 398 KVNKELALKLIEEEEEKQKSTWKKKVKSL---PNILTDDRFKVMFENPDLQVDEES 450
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|402890084|ref|XP_003908322.1| PREDICTED: nucleolar protein 10 isoform 2 [Papio anubis] | Back alignment and taxonomy information |
|---|
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 168/416 (40%), Positives = 221/416 (53%), Gaps = 96/416 (23%)
Query: 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRV-------------RCYETDN 77
D+RRRIELIQDFEMP V T++++S DGQY+L+TG YKPRV RC +++
Sbjct: 38 DVRRRIELIQDFEMPTVCTTIKVSKDGQYILATGTYKPRVRCYDTYQLSLKFERCLDSEV 97
Query: 78 LSM----------------------------------KFERCFD--------------SE 89
++ KF R F SE
Sbjct: 98 VTFEILSDDYSKIVFLHNDRYIEFHSQSGFYYKTRIPKFGRDFSYHYPSCDLYFVGASSE 157
Query: 90 VVTFEILSDDY-------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142
V + Y ++E N IN H L GTIEG+VE WDPR + + G LDCA
Sbjct: 158 VYRLNLEQGRYLNPLQTDAAENNVCDINSEHGLFATGTIEGRVECWDPRTRNRVGLLDCA 217
Query: 143 FNCISNERDTEE-------------------KEGKASSDESSEEEEEEEEEEESSDDDQA 183
N ++ + + G+ S E E + + +
Sbjct: 218 LNSVTADSEINNLPTISALKFNGALTMAVGTSTGQGKIFTSLEPEHDLNDVCLYPNSGML 277
Query: 184 WTKE------IKKTYNLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLG 237
T I LGPAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL
Sbjct: 278 LTANETPKMGIYYIPVLGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLT 337
Query: 238 HLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLP 297
HLIG+ LRAYMHGFFMDIRLY K K + PF +EE++K KIR++IE+ R + VQL KLP
Sbjct: 338 HLIGSPFLRAYMHGFFMDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLP 397
Query: 298 KVNQELALKLMDEKQKAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
KVN+ELALKL++E+++ +++ +KK K L ++L DDRF +FENPDFQV E S
Sbjct: 398 KVNKELALKLIEEEEEKQKSTWKKKVKSL---PSILTDDRFKVMFENPDFQVDEES 450
|
Source: Papio anubis Species: Papio anubis Genus: Papio Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|189237612|ref|XP_969116.2| PREDICTED: similar to nucleolar protein 10 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 193/283 (68%), Gaps = 35/283 (12%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERD--------- 151
+S +N AINPVH L+ GT EG+VEAWDPR K GTLDCAFNC++ ++
Sbjct: 176 ASAINKCAINPVHNLLVCGTQEGRVEAWDPRSKGLVGTLDCAFNCVTENKELEGFPSVSA 235
Query: 152 ------------TEEKEGKA-SSDESSEEEEEEEEEEESSDDDQAWTKEIKKTY---NLG 195
T +GK +S E+S E ++ A +TY +LG
Sbjct: 236 LAFDGALTMGVGTATGQGKLFTSIEASTEFNNLCVVPKTGLFFIANENTKIQTYYIPSLG 295
Query: 196 PAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMD 255
PAP+W FLD+LTEELEE+ EN+YDDYKFVT+QELE+LGL HLIGT+LLRAYMHG+FMD
Sbjct: 296 PAPRWASFLDSLTEELEESNSENIYDDYKFVTKQELENLGLDHLIGTNLLRAYMHGYFMD 355
Query: 256 IRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQKAE 315
+RLY+KAKSV+ PFEFEE++KKKIRE IE+ER VQ+NKLPKVN++LALKLM+++ K
Sbjct: 356 VRLYKKAKSVANPFEFEEYRKKKIRETIEKERVNRVQVNKLPKVNKDLALKLMNDQVKD- 414
Query: 316 ETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSDQVR 358
KKKK+ +ANLLED RF LFENPDF+V + ++D+ R
Sbjct: 415 -----KKKKE---NANLLEDTRFKALFENPDFEV-DKNADEFR 448
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|426223134|ref|XP_004005732.1| PREDICTED: nucleolar protein 10 isoform 2 [Ovis aries] | Back alignment and taxonomy information |
|---|
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 174/278 (62%), Gaps = 28/278 (10%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERD--------- 151
++E N IN VH L GTIEG+VE WDPR + + G LDCA + ++ + +
Sbjct: 176 AAENNVCDINSVHGLFATGTIEGRVECWDPRTRGRVGVLDCALSSVTADSEINSLPTISA 235
Query: 152 ------------TEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKKTYNLG 195
T +GK + E + + +S ++A I LG
Sbjct: 236 LKFNGALTMAVGTSTGQGKIFTSLEPEHDLNDVCLYPNSGMLLTANEAPKMGIYYVPVLG 295
Query: 196 PAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMD 255
PAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFFMD
Sbjct: 296 PAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMD 355
Query: 256 IRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQKAE 315
IRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++ +
Sbjct: 356 IRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEEKQ 415
Query: 316 ETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 416 KSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 450
|
Source: Ovis aries Species: Ovis aries Genus: Ovis Family: Bovidae Order: Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|386869309|ref|NP_001248323.1| nucleolar protein 10 isoform 3 [Homo sapiens] gi|114576097|ref|XP_001157847.1| PREDICTED: nucleolar protein 10 isoform 1 [Pan troglodytes] gi|397513417|ref|XP_003827012.1| PREDICTED: nucleolar protein 10 isoform 2 [Pan paniscus] gi|119621358|gb|EAX00953.1| nucleolar protein 10, isoform CRA_a [Homo sapiens] | Back alignment and taxonomy information |
|---|
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 131/278 (47%), Positives = 170/278 (61%), Gaps = 28/278 (10%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEE------ 154
++E N IN VH L GTIEG+VE WDPR + + G LDCA N ++ + +
Sbjct: 176 AAENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINSLPTISA 235
Query: 155 -------------KEGKASSDESSEEEEEEEEEEESSDDDQAWTKE------IKKTYNLG 195
G+ S E E + + + T I LG
Sbjct: 236 LKFNGALTMAVGTTTGQGKIFTSLEPEHDLNDVCLYPNSGMLLTANETPKMGIYYIPVLG 295
Query: 196 PAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMD 255
PAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFFMD
Sbjct: 296 PAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMD 355
Query: 256 IRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQKAE 315
IRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++ +
Sbjct: 356 IRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEEKQ 415
Query: 316 ETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 416 KSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 450
|
Source: Homo sapiens Species: Homo sapiens Genus: Homo Family: Hominidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|410955828|ref|XP_003984552.1| PREDICTED: nucleolar protein 10 isoform 3 [Felis catus] | Back alignment and taxonomy information |
|---|
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 172/278 (61%), Gaps = 28/278 (10%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERD--------- 151
++E N IN VH L GTIEG+VE WDPR + + G LDCA + ++ + +
Sbjct: 176 AAENNVCDINSVHGLFATGTIEGRVECWDPRTRSRVGLLDCALSSVTADSEINSLPTISA 235
Query: 152 ------------TEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKKTYNLG 195
T +GK + E + + S ++ I LG
Sbjct: 236 LKFNGALTMAVGTSTGQGKIFTSLEPEHDINDVCLYPGSGMLLTANETPKMGIYYIPVLG 295
Query: 196 PAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMD 255
PAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFFMD
Sbjct: 296 PAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMD 355
Query: 256 IRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQKAE 315
IRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++ +
Sbjct: 356 IRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEEKQ 415
Query: 316 ETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ +KK K L N+L DDRF +FENPDFQV E S
Sbjct: 416 KSTWKKKVKSL---PNILTDDRFKVMFENPDFQVDEES 450
|
Source: Felis catus Species: Felis catus Genus: Felis Family: Felidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|109102011|ref|XP_001087305.1| PREDICTED: nucleolar protein 10 isoform 2 [Macaca mulatta] | Back alignment and taxonomy information |
|---|
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/278 (46%), Positives = 170/278 (61%), Gaps = 28/278 (10%)
Query: 101 SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEE------ 154
++E N IN VH L GTIEG+VE WDPR + + G LDCA N ++ + +
Sbjct: 176 AAENNVCDINSVHGLFATGTIEGRVECWDPRTRNRVGLLDCALNSVTADSEINNLPTISA 235
Query: 155 -------------KEGKASSDESSEEEEEEEEEEESSDDDQAWTKE------IKKTYNLG 195
G+ S E E + + + T I LG
Sbjct: 236 LKFNGALTMAVGTSTGQGKIFTSLEPEHDLNDVCLYPNSGMLLTANETPKMGIYYIPVLG 295
Query: 196 PAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMD 255
PAP+WC FLDNLTEELEEN VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFFMD
Sbjct: 296 PAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFFMD 355
Query: 256 IRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQKAE 315
IRLY K K + PF +EE++K KIR++IE+ R + VQL KLPKVN+ELALKL++E+++ +
Sbjct: 356 IRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEEKQ 415
Query: 316 ETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ +KK K L ++L DDRF +FENPDFQV E S
Sbjct: 416 KSTWKKKVKSL---PSILTDDRFKVMFENPDFQVDEES 450
|
Source: Macaca mulatta Species: Macaca mulatta Genus: Macaca Family: Cercopithecidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|50745027|ref|XP_419950.1| PREDICTED: nucleolar protein 10 [Gallus gallus] | Back alignment and taxonomy information |
|---|
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 132/160 (82%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAPKWC FLDNLTEELEEN VYDDYKFVTR++LE+LGL HLIG+SLLRAYMHGFF
Sbjct: 344 LGPAPKWCSFLDNLTEELEENPESTVYDDYKFVTRKDLENLGLAHLIGSSLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY KAK ++ PF +EE++++KIR++IE+ R + VQL KLPKVN+ELALKL++E+ +
Sbjct: 404 MDIRLYHKAKMMANPFAYEEYRREKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEGE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ ++K+K L +LL+DDRF +FENPDFQV E S
Sbjct: 464 EQQATRKRKQKNL---PSLLKDDRFKVMFENPDFQVDEQS 500
|
Source: Gallus gallus Species: Gallus gallus Genus: Gallus Family: Phasianidae Order: Galliformes Class: Aves Phylum: Chordata Superkingdom: Eukaryota |
| >gi|449283682|gb|EMC90287.1| Nucleolar protein 10 [Columba livia] | Back alignment and taxonomy information |
|---|
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 132/160 (82%), Gaps = 3/160 (1%)
Query: 194 LGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAPKWC FLDNLTEELEEN VYDDYKFVTR++LE+LGL HLIG+SLLRAYMHGFF
Sbjct: 344 LGPAPKWCSFLDNLTEELEENPESTVYDDYKFVTRKDLENLGLAHLIGSSLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY KAK ++ PF +EE++++KIR++IE+ R + VQL KLPKVN+ELALKL++E+ +
Sbjct: 404 MDIRLYHKAKMMANPFAYEEYRREKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEGE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPS 353
++ ++K+K L +LL+DDRF +FENPDFQV E S
Sbjct: 464 EQQVTRKRKQKNL---PSLLKDDRFKVMFENPDFQVDEQS 500
|
Source: Columba livia Species: Columba livia Genus: Columba Family: Columbidae Order: Columbiformes Class: Aves Phylum: Chordata Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 358 | ||||||
| UNIPROTKB|E1BXP3 | 688 | NOL10 "Uncharacterized protein | 0.444 | 0.231 | 0.543 | 2.2e-81 | |
| ZFIN|ZDB-GENE-040426-764 | 722 | nol10 "nucleolar protein 10" [ | 0.444 | 0.220 | 0.530 | 3.4e-81 | |
| MGI|MGI:2684913 | 687 | Nol10 "nucleolar protein 10" [ | 0.444 | 0.231 | 0.506 | 7.3e-79 | |
| RGD|1359447 | 688 | Nol10 "nucleolar protein 10" [ | 0.444 | 0.231 | 0.506 | 7.4e-79 | |
| UNIPROTKB|Q9BSC4 | 688 | NOL10 "Nucleolar protein 10" [ | 0.444 | 0.231 | 0.506 | 2.5e-78 | |
| UNIPROTKB|E2R1X1 | 688 | NOL10 "Uncharacterized protein | 0.444 | 0.231 | 0.506 | 2.9e-77 | |
| UNIPROTKB|F1SAA1 | 688 | NOL10 "Uncharacterized protein | 0.444 | 0.231 | 0.506 | 5.8e-77 | |
| UNIPROTKB|E1BKR4 | 688 | NOL10 "Uncharacterized protein | 0.444 | 0.231 | 0.506 | 3.6e-75 | |
| UNIPROTKB|F5H6G7 | 638 | NOL10 "Nucleolar protein 10" [ | 0.444 | 0.249 | 0.506 | 2.8e-72 | |
| FB|FBgn0261535 | 721 | l(2)34Fd "lethal (2) 34Fd" [Dr | 0.441 | 0.219 | 0.439 | 2.3e-69 |
| UNIPROTKB|E1BXP3 NOL10 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 427 (155.4 bits), Expect = 2.2e-81, Sum P(3) = 2.2e-81
Identities = 88/162 (54%), Positives = 108/162 (66%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAPKWC FLD VYDDYKFVTR++LE+LGL HLIG+SLLRAYMHGFF
Sbjct: 344 LGPAPKWCSFLDNLTEELEENPESTVYDDYKFVTRKDLENLGLAHLIGSSLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY KAK ++ P + VQL KLPKVN+ELALKL++E+
Sbjct: 404 MDIRLYHKAKMMANPFAYEEYRREKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEE-- 461
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
EE ++ +K+K+ L + LL+DDRF +FENPDFQV E S +
Sbjct: 462 GEEQQATRKRKQKNLPS-LLKDDRFKVMFENPDFQVDEQSEE 502
|
|
| ZFIN|ZDB-GENE-040426-764 nol10 "nucleolar protein 10" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 423 (154.0 bits), Expect = 3.4e-81, Sum P(3) = 3.4e-81
Identities = 86/162 (53%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD +YDDYKFVTR++LE LGL HLIG+ LLRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTIYDDYKFVTRKDLESLGLAHLIGSPLLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K++ P + VQL KLPKVN+ELALKLM+E
Sbjct: 404 MDIRLYHKVKTMVNPFAYEEYRKDKIRQKIEESRAQRVQLKKLPKVNKELALKLMEEDT- 462
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
E ++KKKKK ++ NLL DDRF +FENPD+QV E S +
Sbjct: 463 --ELTNKKKKKKANVAGNLLMDDRFKVMFENPDYQVDERSEE 502
|
|
| MGI|MGI:2684913 Nol10 "nucleolar protein 10" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 7.3e-79, Sum P(3) = 7.3e-79
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTLKKKVKSLP---NILTDDRFKVMFENPDFQVDEESEE 502
|
|
| RGD|1359447 Nol10 "nucleolar protein 10" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 7.4e-79, Sum P(3) = 7.4e-79
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTLKKKVKSLP---NILTDDRFKVMFENPDFQVDEDSEE 502
|
|
| UNIPROTKB|Q9BSC4 NOL10 "Nucleolar protein 10" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 403 (146.9 bits), Expect = 2.5e-78, Sum P(3) = 2.5e-78
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTWKKKVKSLP---NILTDDRFKVMFENPDFQVDEESEE 502
|
|
| UNIPROTKB|E2R1X1 NOL10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 403 (146.9 bits), Expect = 2.9e-77, Sum P(3) = 2.9e-77
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTWKKKVKSLP---NILTDDRFKVMFENPDFQVDEESEE 502
|
|
| UNIPROTKB|F1SAA1 NOL10 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 404 (147.3 bits), Expect = 5.8e-77, Sum P(3) = 5.8e-77
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTWKKKAKSLP---NILTDDRFKVMFENPDFQVDEESEE 502
|
|
| UNIPROTKB|E1BKR4 NOL10 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 403 (146.9 bits), Expect = 3.6e-75, Sum P(3) = 3.6e-75
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 344 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 403
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 404 MDIRLYHKVKLMLNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 463
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 464 KQKSTWKKKVKSLP---NILTDDRFKVMFENPDFQVDEESEE 502
|
|
| UNIPROTKB|F5H6G7 NOL10 "Nucleolar protein 10" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 403 (146.9 bits), Expect = 2.8e-72, Sum P(3) = 2.8e-72
Identities = 82/162 (50%), Positives = 103/162 (63%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
LGPAP+WC FLD VYDDYKFVT+++LE+LGL HLIG+ LRAYMHGFF
Sbjct: 294 LGPAPRWCSFLDNLTEELEENPESTVYDDYKFVTKKDLENLGLTHLIGSPFLRAYMHGFF 353
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQLNKLPKVNQELALKLMDEKQK 313
MDIRLY K K + P + VQL KLPKVN+ELALKL++E+++
Sbjct: 354 MDIRLYHKVKLMVNPFAYEEYRKDKIRQKIEETRAQRVQLKKLPKVNKELALKLIEEEEE 413
Query: 314 AEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSD 355
+++ +KK K L N+L DDRF +FENPDFQV E S +
Sbjct: 414 KQKSTWKKKVKSLP---NILTDDRFKVMFENPDFQVDEESEE 452
|
|
| FB|FBgn0261535 l(2)34Fd "lethal (2) 34Fd" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 343 (125.8 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 73/166 (43%), Positives = 100/166 (60%)
Query: 194 LGPAPKWCGFLDXXXXXXXXXXXXXVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFF 253
+GPAP+WC FLD VYDDY+FVT +EL +LG+ HL+G++LL+ YMHG+F
Sbjct: 340 MGPAPRWCSFLDNLTEEIESEVVENVYDDYQFVTAKELAELGMEHLVGSNLLKGYMHGYF 399
Query: 254 MDIRLYRKAKSVSAPXXXXXXXXXXXXXXXXXXXTRGVQL-NKLPKVNQELALKLMDEKQ 312
MD RLY KAK+V P +Q+ +KLPKVN+ELALK+MDE+
Sbjct: 400 MDARLYNKAKAVVEPFAFDRFRKDKIRQEIESERKSRLQIESKLPKVNKELALKIMDEQ- 458
Query: 313 KAEETESRKKKKKLQLSANLLEDDRFSKLFENPDFQVIEPSSDQVR 358
A + S K++ +LLED RF +FEN DF+V S+++ R
Sbjct: 459 -ANPSNSAKQRNV----PSLLEDSRFKAMFENADFEV-NKSAEEYR 498
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6NVM6 | NOL10_XENTR | No assigned EC number | 0.6346 | 0.4217 | 0.2201 | yes | N/A |
| Q802W4 | NOL10_DANRE | No assigned EC number | 0.6562 | 0.4385 | 0.2174 | yes | N/A |
| Q66H99 | NOL10_RAT | No assigned EC number | 0.6312 | 0.4385 | 0.2281 | yes | N/A |
| Q9BSC4 | NOL10_HUMAN | No assigned EC number | 0.6312 | 0.4385 | 0.2281 | yes | N/A |
| Q5RJG1 | NOL10_MOUSE | No assigned EC number | 0.6312 | 0.4385 | 0.2285 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 358 | |||
| cd11486 | 635 | cd11486, SLC5sbd_SGLT1, Na(+)/glucose cotransporte | 0.001 |
| >gnl|CDD|212055 cd11486, SLC5sbd_SGLT1, Na(+)/glucose cotransporter SGLT1;solute binding domain | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 13/81 (16%)
Query: 145 CISNERDTEEKEGKASSDESSEEEEEEEEEEESSDDDQAWTKEIKKTYNLGPAPKWCGFL 204
C S TEE+ + D + +E+E E E +E +K YN +CGF
Sbjct: 534 CWSLRNSTEERIDLDADDWTEDEDENEMETDEERKKPGCC----RKAYNW-----FCGFD 584
Query: 205 DN----LTEELEENIIENVYD 221
LTEE E + + D
Sbjct: 585 QGKAPKLTEEEEAALKMKMTD 605
|
Human SGLT1 (hSGLT1) is a high-affinity/low-capacity glucose transporter, which can also transport galactose. In the transport mechanism, two Na+ ions first bind to the extracellular side of the transporter and induce a conformational change in the glucose binding site. This results in an increased affinity for glucose. A second conformational change in the transporter follows, bringing the Na+ and glucose binding sites to the inner surface of the membrane. Glucose is then released, followed by the Na+ ions. In the process, hSGLT1 is also able to transport water and urea and may be a major pathway for transport of these across the intestinal brush-border membrane. hSGLT1 is encoded by the SLC5A1 gene and expressed mostly in the intestine, but also in the trachea, kidney, heart, brain, testis, and prostate. The WHO/UNICEF oral rehydration solution (ORS) for the treatment of secretory diarrhea contains salt and glucose. The glucose, along with sodium ions, is transported by hSGLT1 and water is either co-transported along with these or follows by osmosis. Mutations in SGLT1 are associated with intestinal glucose galactose malabsorption (GGM). Up-regulation of intestinal SGLT1 may protect against enteric infections. SGLT1 is expressed in colorectal, head and neck, and prostate tumors. Epidermal growth factor receptor (EGFR) functions in cell survival by stabilizing SGLT1, and thereby maintaining intracellular glucose levels. SGLT1 is predicted to have 14 membrane-spanning regions. This subgroup belongs to the solute carrier 5 (SLC5)transporter family. Length = 635 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| KOG2321|consensus | 703 | 100.0 | ||
| KOG0285|consensus | 460 | 99.86 | ||
| KOG0272|consensus | 459 | 99.81 | ||
| KOG0279|consensus | 315 | 99.79 | ||
| KOG1272|consensus | 545 | 99.75 | ||
| KOG0272|consensus | 459 | 99.75 | ||
| KOG0266|consensus | 456 | 99.74 | ||
| KOG0263|consensus | 707 | 99.74 | ||
| KOG0263|consensus | 707 | 99.74 | ||
| KOG0266|consensus | 456 | 99.69 | ||
| KOG0279|consensus | 315 | 99.69 | ||
| KOG0271|consensus | 480 | 99.68 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.68 | |
| KOG0271|consensus | 480 | 99.68 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.66 | |
| KOG0319|consensus | 775 | 99.66 | ||
| KOG0265|consensus | 338 | 99.64 | ||
| KOG0295|consensus | 406 | 99.64 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.64 | |
| KOG0315|consensus | 311 | 99.64 | ||
| KOG0291|consensus | 893 | 99.64 | ||
| KOG0264|consensus | 422 | 99.63 | ||
| KOG0276|consensus | 794 | 99.62 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.62 | |
| KOG0286|consensus | 343 | 99.61 | ||
| KOG0313|consensus | 423 | 99.59 | ||
| KOG0316|consensus | 307 | 99.59 | ||
| KOG0284|consensus | 464 | 99.58 | ||
| KOG0302|consensus | 440 | 99.57 | ||
| KOG0282|consensus | 503 | 99.57 | ||
| KOG0318|consensus | 603 | 99.57 | ||
| KOG0277|consensus | 311 | 99.57 | ||
| KOG0265|consensus | 338 | 99.56 | ||
| KOG0286|consensus | 343 | 99.54 | ||
| KOG0315|consensus | 311 | 99.54 | ||
| KOG0275|consensus | 508 | 99.54 | ||
| KOG0645|consensus | 312 | 99.54 | ||
| KOG0291|consensus | 893 | 99.54 | ||
| KOG0273|consensus | 524 | 99.53 | ||
| KOG0310|consensus | 487 | 99.53 | ||
| KOG0973|consensus | 942 | 99.52 | ||
| KOG0640|consensus | 430 | 99.52 | ||
| KOG0647|consensus | 347 | 99.51 | ||
| KOG0292|consensus | 1202 | 99.51 | ||
| KOG0285|consensus | 460 | 99.51 | ||
| KOG0319|consensus | 775 | 99.5 | ||
| KOG0278|consensus | 334 | 99.48 | ||
| KOG0643|consensus | 327 | 99.48 | ||
| KOG0283|consensus | 712 | 99.48 | ||
| KOG0282|consensus | 503 | 99.47 | ||
| KOG0772|consensus | 641 | 99.47 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.47 | |
| KOG0275|consensus | 508 | 99.46 | ||
| KOG0308|consensus | 735 | 99.46 | ||
| KOG0647|consensus | 347 | 99.45 | ||
| KOG0313|consensus | 423 | 99.45 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.45 | |
| KOG0284|consensus | 464 | 99.45 | ||
| KOG0276|consensus | 794 | 99.44 | ||
| KOG0277|consensus | 311 | 99.44 | ||
| KOG4283|consensus | 397 | 99.43 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.43 | |
| KOG0306|consensus | 888 | 99.43 | ||
| KOG0645|consensus | 312 | 99.42 | ||
| KOG0295|consensus | 406 | 99.42 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.42 | |
| KOG1036|consensus | 323 | 99.4 | ||
| KOG1446|consensus | 311 | 99.4 | ||
| KOG0639|consensus | 705 | 99.4 | ||
| KOG0278|consensus | 334 | 99.4 | ||
| KOG0274|consensus | 537 | 99.39 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.39 | |
| KOG0296|consensus | 399 | 99.38 | ||
| KOG0305|consensus | 484 | 99.37 | ||
| KOG0269|consensus | 839 | 99.37 | ||
| KOG1036|consensus | 323 | 99.36 | ||
| KOG0264|consensus | 422 | 99.35 | ||
| KOG0281|consensus | 499 | 99.34 | ||
| KOG0289|consensus | 506 | 99.34 | ||
| KOG0289|consensus | 506 | 99.34 | ||
| KOG0640|consensus | 430 | 99.32 | ||
| KOG0283|consensus | 712 | 99.32 | ||
| KOG1407|consensus | 313 | 99.32 | ||
| KOG0274|consensus | 537 | 99.31 | ||
| KOG4283|consensus | 397 | 99.3 | ||
| KOG0292|consensus | 1202 | 99.29 | ||
| KOG1407|consensus | 313 | 99.28 | ||
| KOG0310|consensus | 487 | 99.27 | ||
| KOG0318|consensus | 603 | 99.26 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.26 | |
| KOG0316|consensus | 307 | 99.25 | ||
| KOG0303|consensus | 472 | 99.23 | ||
| KOG0273|consensus | 524 | 99.22 | ||
| KOG0288|consensus | 459 | 99.22 | ||
| KOG0305|consensus | 484 | 99.21 | ||
| KOG0772|consensus | 641 | 99.21 | ||
| KOG1034|consensus | 385 | 99.21 | ||
| KOG0641|consensus | 350 | 99.2 | ||
| KOG0288|consensus | 459 | 99.19 | ||
| KOG0302|consensus | 440 | 99.19 | ||
| KOG0300|consensus | 481 | 99.19 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.19 | |
| KOG0281|consensus | 499 | 99.18 | ||
| KOG0306|consensus | 888 | 99.18 | ||
| KOG0293|consensus | 519 | 99.18 | ||
| KOG0294|consensus | 362 | 99.17 | ||
| KOG0301|consensus | 745 | 99.17 | ||
| KOG0270|consensus | 463 | 99.15 | ||
| KOG0267|consensus | 825 | 99.14 | ||
| KOG0646|consensus | 476 | 99.13 | ||
| KOG2096|consensus | 420 | 99.11 | ||
| KOG0269|consensus | 839 | 99.11 | ||
| KOG0267|consensus | 825 | 99.09 | ||
| KOG2048|consensus | 691 | 99.07 | ||
| KOG0973|consensus | 942 | 99.07 | ||
| KOG0643|consensus | 327 | 99.04 | ||
| KOG1009|consensus | 434 | 99.04 | ||
| KOG4328|consensus | 498 | 99.04 | ||
| KOG1273|consensus | 405 | 99.04 | ||
| KOG0307|consensus | 1049 | 99.03 | ||
| KOG1332|consensus | 299 | 99.03 | ||
| KOG0646|consensus | 476 | 99.03 | ||
| KOG0299|consensus | 479 | 99.03 | ||
| KOG1539|consensus | 910 | 99.03 | ||
| KOG1446|consensus | 311 | 99.03 | ||
| KOG1009|consensus | 434 | 99.01 | ||
| KOG1274|consensus | 933 | 99.01 | ||
| KOG1273|consensus | 405 | 98.99 | ||
| KOG0308|consensus | 735 | 98.98 | ||
| PF08159 | 30 | NUC153: NUC153 domain; InterPro: IPR012580 This sm | 98.97 | |
| KOG0270|consensus | 463 | 98.96 | ||
| KOG2111|consensus | 346 | 98.96 | ||
| KOG1408|consensus | 1080 | 98.96 | ||
| KOG0301|consensus | 745 | 98.94 | ||
| KOG0321|consensus | 720 | 98.94 | ||
| KOG0268|consensus | 433 | 98.93 | ||
| KOG1445|consensus | 1012 | 98.92 | ||
| KOG0300|consensus | 481 | 98.92 | ||
| KOG0303|consensus | 472 | 98.92 | ||
| KOG1539|consensus | 910 | 98.92 | ||
| KOG1274|consensus | 933 | 98.9 | ||
| KOG0293|consensus | 519 | 98.89 | ||
| KOG1007|consensus | 370 | 98.89 | ||
| KOG2055|consensus | 514 | 98.88 | ||
| KOG0649|consensus | 325 | 98.87 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 98.85 | |
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.84 | |
| KOG2055|consensus | 514 | 98.83 | ||
| KOG2096|consensus | 420 | 98.82 | ||
| KOG0642|consensus | 577 | 98.81 | ||
| KOG2110|consensus | 391 | 98.8 | ||
| KOG1408|consensus | 1080 | 98.8 | ||
| KOG2919|consensus | 406 | 98.8 | ||
| KOG0299|consensus | 479 | 98.79 | ||
| KOG0296|consensus | 399 | 98.78 | ||
| KOG0322|consensus | 323 | 98.78 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.74 | |
| KOG0321|consensus | 720 | 98.73 | ||
| KOG1188|consensus | 376 | 98.73 | ||
| KOG2394|consensus | 636 | 98.73 | ||
| KOG0294|consensus | 362 | 98.72 | ||
| KOG0639|consensus | 705 | 98.72 | ||
| KOG0649|consensus | 325 | 98.71 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.7 | |
| KOG1310|consensus | 758 | 98.69 | ||
| KOG0771|consensus | 398 | 98.68 | ||
| KOG0322|consensus | 323 | 98.67 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 98.67 | |
| KOG0268|consensus | 433 | 98.66 | ||
| KOG1007|consensus | 370 | 98.64 | ||
| KOG2315|consensus | 566 | 98.64 | ||
| KOG2445|consensus | 361 | 98.64 | ||
| KOG0650|consensus | 733 | 98.64 | ||
| KOG1524|consensus | 737 | 98.63 | ||
| KOG4227|consensus | 609 | 98.6 | ||
| KOG1445|consensus | 1012 | 98.59 | ||
| KOG4378|consensus | 673 | 98.57 | ||
| KOG0641|consensus | 350 | 98.57 | ||
| KOG2048|consensus | 691 | 98.56 | ||
| KOG2919|consensus | 406 | 98.55 | ||
| KOG1332|consensus | 299 | 98.55 | ||
| KOG1587|consensus | 555 | 98.54 | ||
| KOG1188|consensus | 376 | 98.52 | ||
| KOG2445|consensus | 361 | 98.5 | ||
| KOG0290|consensus | 364 | 98.48 | ||
| KOG1354|consensus | 433 | 98.46 | ||
| KOG2394|consensus | 636 | 98.44 | ||
| KOG4328|consensus | 498 | 98.42 | ||
| KOG4378|consensus | 673 | 98.42 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.41 | |
| KOG0644|consensus | 1113 | 98.4 | ||
| KOG0771|consensus | 398 | 98.4 | ||
| KOG4497|consensus | 447 | 98.36 | ||
| KOG0290|consensus | 364 | 98.36 | ||
| KOG3881|consensus | 412 | 98.35 | ||
| KOG2106|consensus | 626 | 98.33 | ||
| KOG0642|consensus | 577 | 98.33 | ||
| KOG4547|consensus | 541 | 98.32 | ||
| KOG2110|consensus | 391 | 98.31 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.31 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.27 | |
| KOG2139|consensus | 445 | 98.27 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.27 | |
| KOG1063|consensus | 764 | 98.25 | ||
| KOG1310|consensus | 758 | 98.23 | ||
| KOG1538|consensus | 1081 | 98.22 | ||
| KOG1063|consensus | 764 | 98.22 | ||
| KOG1538|consensus | 1081 | 98.2 | ||
| KOG2111|consensus | 346 | 98.2 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.2 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.14 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.13 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.13 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.13 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.12 | |
| KOG0307|consensus | 1049 | 98.12 | ||
| KOG1587|consensus | 555 | 98.11 | ||
| KOG1272|consensus | 545 | 98.11 | ||
| KOG1034|consensus | 385 | 98.1 | ||
| KOG2106|consensus | 626 | 98.09 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.08 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.05 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 98.05 | |
| KOG1240|consensus | 1431 | 98.05 | ||
| KOG1963|consensus | 792 | 98.03 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.01 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.0 | |
| KOG1334|consensus | 559 | 98.0 | ||
| KOG1963|consensus | 792 | 97.98 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.98 | |
| KOG1517|consensus | 1387 | 97.93 | ||
| KOG4497|consensus | 447 | 97.92 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.91 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 97.91 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.88 | |
| KOG3881|consensus | 412 | 97.88 | ||
| KOG1523|consensus | 361 | 97.87 | ||
| KOG1064|consensus | 2439 | 97.87 | ||
| KOG1354|consensus | 433 | 97.86 | ||
| KOG0280|consensus | 339 | 97.85 | ||
| KOG4532|consensus | 344 | 97.85 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.84 | |
| KOG4547|consensus | 541 | 97.82 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.8 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 97.8 | |
| KOG0650|consensus | 733 | 97.77 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.76 | |
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 97.73 | |
| KOG2139|consensus | 445 | 97.72 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.7 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 97.67 | |
| KOG0974|consensus | 967 | 97.67 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 97.66 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 97.63 | |
| KOG2321|consensus | 703 | 97.59 | ||
| KOG1523|consensus | 361 | 97.54 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.52 | |
| KOG3914|consensus | 390 | 97.47 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 97.44 | |
| KOG1517|consensus | 1387 | 97.44 | ||
| KOG1524|consensus | 737 | 97.43 | ||
| KOG3914|consensus | 390 | 97.39 | ||
| KOG2695|consensus | 425 | 97.36 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 97.36 | |
| KOG0280|consensus | 339 | 97.34 | ||
| KOG2314|consensus | 698 | 97.31 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.3 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 97.3 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.3 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 97.3 | |
| KOG2066|consensus | 846 | 97.29 | ||
| KOG2695|consensus | 425 | 97.18 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 97.17 | |
| KOG0309|consensus | 1081 | 97.15 | ||
| KOG0882|consensus | 558 | 97.14 | ||
| KOG0974|consensus | 967 | 97.14 | ||
| KOG4714|consensus | 319 | 97.12 | ||
| KOG4190|consensus | 1034 | 97.1 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.08 | |
| PF08149 | 80 | BING4CT: BING4CT (NUC141) domain; InterPro: IPR012 | 97.05 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 97.0 | |
| KOG4227|consensus | 609 | 96.97 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.85 | |
| KOG1334|consensus | 559 | 96.81 | ||
| KOG2315|consensus | 566 | 96.8 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 96.7 | |
| KOG0309|consensus | 1081 | 96.6 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 96.54 | |
| KOG1240|consensus | 1431 | 96.53 | ||
| KOG2318|consensus | 650 | 96.5 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 96.4 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 96.39 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 96.35 | |
| KOG1409|consensus | 404 | 96.3 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 96.29 | |
| KOG0644|consensus | 1113 | 96.26 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 96.18 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 96.15 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.14 | |
| KOG1912|consensus | 1062 | 96.03 | ||
| KOG2079|consensus | 1206 | 95.99 | ||
| KOG2314|consensus | 698 | 95.97 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 95.94 | |
| KOG4714|consensus | 319 | 95.92 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 95.79 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 95.72 | |
| KOG3617|consensus | 1416 | 95.71 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 95.6 | |
| COG5638 | 622 | Uncharacterized conserved protein [Function unknow | 95.56 | |
| KOG4190|consensus | 1034 | 95.36 | ||
| KOG1275|consensus | 1118 | 95.3 | ||
| KOG4640|consensus | 665 | 95.28 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 95.2 | |
| KOG3621|consensus | 726 | 95.04 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 94.71 | |
| KOG2041|consensus | 1189 | 94.66 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 94.64 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 94.41 | |
| KOG1409|consensus | 404 | 94.38 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 94.31 | |
| KOG1064|consensus | 2439 | 94.23 | ||
| KOG1832|consensus | 1516 | 94.2 | ||
| KOG4640|consensus | 665 | 94.2 | ||
| KOG2114|consensus | 933 | 94.16 | ||
| KOG2041|consensus | 1189 | 94.09 | ||
| KOG2066|consensus | 846 | 93.99 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 93.91 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.75 | |
| KOG3621|consensus | 726 | 93.68 | ||
| KOG2444|consensus | 238 | 93.65 | ||
| KOG1920|consensus | 1265 | 93.59 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 93.51 | |
| KOG1920|consensus | 1265 | 93.45 | ||
| PF12657 | 173 | TFIIIC_delta: Transcription factor IIIC subunit de | 93.39 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 93.35 | |
| KOG1912|consensus | 1062 | 93.21 | ||
| KOG1275|consensus | 1118 | 93.09 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 93.03 | |
| KOG4532|consensus | 344 | 92.89 | ||
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 92.56 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 92.45 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 92.21 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 91.95 | |
| KOG0882|consensus | 558 | 91.79 | ||
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 91.72 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 91.45 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 91.35 | |
| KOG1008|consensus | 783 | 91.35 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 90.99 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.6 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 90.41 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 90.4 | |
| KOG1645|consensus | 463 | 90.21 | ||
| KOG1645|consensus | 463 | 89.78 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 89.77 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 89.34 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 88.98 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 88.94 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 88.74 | |
| KOG4649|consensus | 354 | 88.5 | ||
| PF03088 | 89 | Str_synth: Strictosidine synthase; InterPro: IPR01 | 88.4 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 87.96 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 87.69 | |
| KOG2114|consensus | 933 | 87.54 | ||
| KOG2395|consensus | 644 | 87.23 | ||
| KOG4460|consensus | 741 | 87.2 | ||
| KOG1832|consensus | 1516 | 86.33 | ||
| PF10214 | 765 | Rrn6: RNA polymerase I-specific transcription-init | 85.16 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 84.5 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 84.41 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 84.13 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 83.9 | |
| PF03088 | 89 | Str_synth: Strictosidine synthase; InterPro: IPR01 | 82.66 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 82.16 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 80.81 |
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-109 Score=818.39 Aligned_cols=347 Identities=50% Similarity=0.827 Sum_probs=318.7
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.|+||..+.+|.|+ ...+|.|++|+++++||||||+|+||++++.|++||||+||+|||+|+|+|+|||+.++++||+|
T Consensus 11 iYnvS~~kslP~Wls~r~kR~lkkd~~~~~rieLiQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFER 90 (703)
T KOG2321|consen 11 IYNVSAGKSLPDWLSDRRKRQLKKDVDYRQRIELIQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFER 90 (703)
T ss_pred EEEeecCCCchhhhhhHHHHHHhhchHHHHHHHHHHhcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeee
Confidence 69999999999999 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCceEEEEEeecCCC---------------------------------------------------------------
Q psy2085 85 CFDSEVVTFEILSDDYS--------------------------------------------------------------- 101 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s--------------------------------------------------------------- 101 (358)
|+|+++|+|.+||+||+
T Consensus 91 hlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P 170 (703)
T KOG2321|consen 91 HLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNP 170 (703)
T ss_pred cccccceeEEEeccchhhheEeecCceeeehhhcCeeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccc
Confidence 99999999999999999
Q ss_pred -----CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc-----------ccc-ccCCCccc---cc---
Q psy2085 102 -----SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC-----------ISN-ERDTEEKE---GK--- 158 (358)
Q Consensus 102 -----~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~-----------v~~-~~~i~gl~---Gt--- 158 (358)
+++|+|.+||.|+|||+|+.||.|++||+|+++.+++|+.+.+. +++ .|+.+|+. ||
T Consensus 171 ~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G 250 (703)
T KOG2321|consen 171 FETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG 250 (703)
T ss_pred cccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCC
Confidence 78999999999999999999999999999999999999876541 111 25556765 65
Q ss_pred -------cCCCc------------eeeEEcCC--CCEEEEec--ceEEEECCCCc-------------------------
Q psy2085 159 -------ASSDE------------SSEEEEEE--EEEEESSD--DDQAWTKEIKK------------------------- 190 (358)
Q Consensus 159 -------Rs~~P------------~sI~fs~d--~~~llSaD--~IKIWD~~tG~------------------------- 190 (358)
|.+.| +.|.|.+. +..|+|+| ++||||..+|+
T Consensus 251 ~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~ 330 (703)
T KOG2321|consen 251 SVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFT 330 (703)
T ss_pred cEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCCcCceeeecCCceEEE
Confidence 66666 78899775 67899999 99999999998
Q ss_pred --------EE---ecCCCCCccccccchhHHhhhccccceeecceeeeHHHHhhcCCCccccccceeecccccccchHHH
Q psy2085 191 --------TY---NLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLY 259 (358)
Q Consensus 191 --------~y---~lgpap~Wcsfldnlteele~~~~~~vyddy~fvt~~~l~~l~l~~ligt~~l~~ymhg~fi~~~ly 259 (358)
+| +|||||+||||||||||||||.+.++|||||+|||+.||++|||+|||||++||+||||||||.+||
T Consensus 331 Ane~~~m~~yyiP~LGPaPrWCSfLdnlTEElEE~~~~TVYDnYkFvTkkdL~~LgLthLiGt~vLrAyMHGyFid~~LY 410 (703)
T KOG2321|consen 331 ANESSKMHTYYIPSLGPAPRWCSFLDNLTEELEENPETTVYDNYKFVTKKDLEKLGLTHLIGTNVLRAYMHGYFIDARLY 410 (703)
T ss_pred ecCCCcceeEEccccCCCchhhhHHHhHHHHHhcCCccccccceeeeeHHHHHhcCCcceeCchHHHHHhhhhhhhHHHH
Confidence 45 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCChhhHHHHHHHHHHHHHHHhhcccccC-CcccccHHHHHHHHHHHHHhHHHHHHHHHHhhhhhccccCChhh
Q psy2085 260 RKAKSVSAPFEFEEFKKKKIRERIEQERTRGVQLN-KLPKVNQELALKLMDEKQKAEETESRKKKKKLQLSANLLEDDRF 338 (358)
Q Consensus 260 ~~~~~~~~p~~~~~~r~~~i~~~~~~~~~~ri~~~-~~~kvn~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~d~rf 338 (358)
+||++++|||||++||+++||++||++|++||+.+ |+||||++||.||+.+++ ++..+ || +...+++||+|+||
T Consensus 411 ~Ka~~v~~PFAye~yr~~kir~~iE~eR~sri~~k~klPkVNk~LA~rl~dE~e--nK~~~-kk--~~k~~~siLtDdRF 485 (703)
T KOG2321|consen 411 NKAKLVVNPFAYEDYRERKIREKIEEERESRIQKKRKLPKVNKELAARLHDEEE--NKLAK-KK--KVKKAPSILTDDRF 485 (703)
T ss_pred HHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhhccCccccHHHHHHhhHhhh--hhhhh-hh--ccccCCcccchhHH
Confidence 99999999999999999999999999999999996 999999999999997633 22222 22 22378999999999
Q ss_pred hhccCCCCccccCCCcccc
Q psy2085 339 SKLFENPDFQVIEPSSDQV 357 (358)
Q Consensus 339 ~~~f~~~~f~id~~~~e~~ 357 (358)
+.||+||||||||+|+||+
T Consensus 486 k~mFen~dFeVDeds~ey~ 504 (703)
T KOG2321|consen 486 KSMFENEDFEVDEDSEEYR 504 (703)
T ss_pred HHhccCcccccCccHHHHh
Confidence 9999999999999999996
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-21 Score=185.93 Aligned_cols=212 Identities=18% Similarity=0.323 Sum_probs=172.9
Q ss_pred ceEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 3 VEYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
-++-.++|.|++..-|+ +.++ |.-.+. |-..|..|++|+-+-||+++| .|++|+|||+...
T Consensus 163 n~wf~tgs~DrtikIwDlatg~--------------LkltltGhi~~vr~vavS~rHpYlFs~g-edk~VKCwDLe~n-- 225 (460)
T KOG0285|consen 163 NEWFATGSADRTIKIWDLATGQ--------------LKLTLTGHIETVRGVAVSKRHPYLFSAG-EDKQVKCWDLEYN-- 225 (460)
T ss_pred ceeEEecCCCceeEEEEcccCe--------------EEEeecchhheeeeeeecccCceEEEec-CCCeeEEEechhh--
Confidence 36778999999999999 5444 233332 556789999999999999776 6889999999864
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
++.||...+. ++|.|++.+|.-..|+|||.|.++++||+|++..+.+|.+|..++
T Consensus 226 kvIR~YhGHl-----------S~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V-------------- 280 (460)
T KOG0285|consen 226 KVIRHYHGHL-----------SGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPV-------------- 280 (460)
T ss_pred hhHHHhcccc-----------ceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcc--------------
Confidence 4555543332 689999999999999999999999999999999999999999988
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE----------------------E-ecCCCC--Cc----cccccchh
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT----------------------Y-NLGPAP--KW----CGFLDNLT 208 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~----------------------y-~lgpap--~W----csfldnlt 208 (358)
.++.+.|....|+| .| +|++||+..|++ | +-+|.. .| ..|+.|+.
T Consensus 281 ---~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nls 357 (460)
T KOG0285|consen 281 ---ASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLS 357 (460)
T ss_pred ---eeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccc
Confidence 78999998888886 68 999999999981 1 112221 25 45888876
Q ss_pred HHhhhccccceeecceeeeHHHHhhcCCCccccccceeecccccccchHHHHHhhhccCChhhHH
Q psy2085 209 EELEENIIENVYDDYKFVTRQELEDLGLGHLIGTSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEE 273 (358)
Q Consensus 209 eele~~~~~~vyddy~fvt~~~l~~l~l~~ligt~~l~~ymhg~fi~~~ly~~~~~~~~p~~~~~ 273 (358)
+.-+..+..++|+|-..++..|. |+-++..|-.||. |+...++.+|.+.+.
T Consensus 358 gh~~iintl~~nsD~v~~~G~dn---------g~~~fwdwksg~n-----yQ~~~t~vqpGSl~s 408 (460)
T KOG0285|consen 358 GHNAIINTLSVNSDGVLVSGGDN---------GSIMFWDWKSGHN-----YQRGQTIVQPGSLES 408 (460)
T ss_pred cccceeeeeeeccCceEEEcCCc---------eEEEEEecCcCcc-----cccccccccCCcccc
Confidence 66666677889999999998887 9999999999996 999999999998775
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-20 Score=178.76 Aligned_cols=151 Identities=18% Similarity=0.220 Sum_probs=121.1
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-ee
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FE 83 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~ 83 (358)
-+.|.|+++..|. +.. ++||+|+ |+..|..|+|.|+|+|| +|++||.+-++||+.+.+.- ..
T Consensus 235 at~s~Dgtvklw~~~~e--------------~~l~~l~gH~~RVs~VafHPsG~~L-~TasfD~tWRlWD~~tk~ElL~Q 299 (459)
T KOG0272|consen 235 ATASADGTVKLWKLSQE--------------TPLQDLEGHLARVSRVAFHPSGKFL-GTASFDSTWRLWDLETKSELLLQ 299 (459)
T ss_pred eeeccCCceeeeccCCC--------------cchhhhhcchhhheeeeecCCCcee-eecccccchhhcccccchhhHhh
Confidence 4678899999997 322 6889997 77899999999999998 68899999999999875422 22
Q ss_pred eeccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
+++..++. .+.+.+|.+ ..|.+|+|+|+|..|||||.|++++|||+|.++
T Consensus 300 EGHs~~v~-~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 300 EGHSKGVF-SIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred cccccccc-eeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence 23323332 222333333 789999999999999999999999999999999
Q ss_pred eeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 135 KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 135 ~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++.++.+|.+.| ..|.|+| .|.+|+| .| ++|||...++.
T Consensus 379 ~ly~ipAH~nlV-----------------S~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~ 421 (459)
T KOG0272|consen 379 ELYTIPAHSNLV-----------------SQVKYSPQEGYFLVTASYDNTVKIWSTRTWS 421 (459)
T ss_pred cceecccccchh-----------------hheEecccCCeEEEEcccCcceeeecCCCcc
Confidence 999999999887 7899998 5667776 68 99999998766
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-18 Score=158.44 Aligned_cols=143 Identities=15% Similarity=0.219 Sum_probs=117.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|++++|||++++.|+ +..+ ..|.|+ |.-.|.+|+||||.+.| +||+-|.+|++|++-.. .+
T Consensus 76 ~~alS~swD~~lrlWDl~~g~--------------~t~~f~GH~~dVlsva~s~dn~qi-vSGSrDkTiklwnt~g~-ck 139 (315)
T KOG0279|consen 76 NFALSASWDGTLRLWDLATGE--------------STRRFVGHTKDVLSVAFSTDNRQI-VSGSRDKTIKLWNTLGV-CK 139 (315)
T ss_pred ceEEeccccceEEEEEecCCc--------------EEEEEEecCCceEEEEecCCCcee-ecCCCcceeeeeeeccc-EE
Confidence 6999999999999999 5433 345564 67789999999999987 68999999999998753 34
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
+.++-+.+ ++.|+|+.|+|+ ..+|+++|.|++|++||+++-+....+-+|.+.+
T Consensus 140 ~t~~~~~~-----------~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v------------- 195 (315)
T KOG0279|consen 140 YTIHEDSH-----------REWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYV------------- 195 (315)
T ss_pred EEEecCCC-----------cCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccE-------------
Confidence 44443322 368999999998 6799999999999999999998888888888877
Q ss_pred CCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+.+++||||.+.+|. | .+-+||++.|+
T Consensus 196 ----~t~~vSpDGslcasGgkdg~~~LwdL~~~k 225 (315)
T KOG0279|consen 196 ----NTVTVSPDGSLCASGGKDGEAMLWDLNEGK 225 (315)
T ss_pred ----EEEEECCCCCEEecCCCCceEEEEEccCCc
Confidence 678888888888873 5 88888888877
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.1e-18 Score=168.02 Aligned_cols=235 Identities=20% Similarity=0.300 Sum_probs=169.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeec-----------------CCC--------
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSD-----------------DYS-------- 101 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~-----------------D~s-------- 101 (358)
.-..+.+|.+|++|+..| -+|.|-.+|+.++.+.|+-+...-+.+..+|.. +.+
T Consensus 131 GPY~~~ytrnGrhlllgG-rKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtElHClk~~ 209 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGG-RKGHLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNNGTELHCLKRH 209 (545)
T ss_pred CCeeeeecCCccEEEecC-CccceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCCCcEEeehhhc
Confidence 357899999999997655 699999999999888777554322222222211 011
Q ss_pred ------------------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Q psy2085 102 ------------------------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL 139 (358)
Q Consensus 102 ------------------------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L 139 (358)
+.+.+++.||-+..+.+|...|+|.+|.|.++.++..+
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKi 289 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKI 289 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHH
Confidence 56777777777777777777788888888777777777
Q ss_pred eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc---EE-------------------ec
Q psy2085 140 DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK---TY-------------------NL 194 (358)
Q Consensus 140 ~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~---~y-------------------~l 194 (358)
-||.+++ .+|+++++|++++| +| .|||||+++-. +| +.
T Consensus 290 LcH~g~V-----------------~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~~ 352 (545)
T KOG1272|consen 290 LCHRGPV-----------------SSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALSY 352 (545)
T ss_pred HhcCCCc-----------------ceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccceeeec
Confidence 7777776 88999999999997 68 99999998644 22 11
Q ss_pred CCCC-Cccccccch--hH--HhhhccccceeecceeeeHHHHhhcCCCcccc-ccceeecccccccchHHHHHhhhccCC
Q psy2085 195 GPAP-KWCGFLDNL--TE--ELEENIIENVYDDYKFVTRQELEDLGLGHLIG-TSLLRAYMHGFFMDIRLYRKAKSVSAP 268 (358)
Q Consensus 195 gpap-~Wcsfldnl--te--ele~~~~~~vyddy~fvt~~~l~~l~l~~lig-t~~l~~ymhg~fi~~~ly~~~~~~~~p 268 (358)
|+.- .|..+++.- .+ =|.- .......+..|++.||+ ||++|.-| |++|.|...--. ||.. ..||
T Consensus 353 G~~v~iw~d~~~~s~~~~~pYm~H-~~~~~V~~l~FcP~EDv--LGIGH~~G~tsilVPGsGePN-----~Ds~--e~nP 422 (545)
T KOG1272|consen 353 GDHVQIWKDALKGSGHGETPYMNH-RCGGPVEDLRFCPYEDV--LGIGHAGGITSILVPGSGEPN-----YDSL--EDNP 422 (545)
T ss_pred CCeeeeehhhhcCCCCCCcchhhh-ccCcccccceeccHHHe--eeccccCCceeEeccCCCCCC-----cchh--ccCc
Confidence 2221 254444311 00 0110 12347788999999999 99999999 999999998886 7777 6799
Q ss_pred hhhHHHH-HHHHHHHHHHHhhccccc--CCccccc-------HHHHHHHHH
Q psy2085 269 FEFEEFK-KKKIRERIEQERTRGVQL--NKLPKVN-------QELALKLMD 309 (358)
Q Consensus 269 ~~~~~~r-~~~i~~~~~~~~~~ri~~--~~~~kvn-------~~la~~l~~ 309 (358)
|.-..+| +++|++.|||..++-|++ ..+-.|| ++.++++++
T Consensus 423 fetrKQRqE~EVr~LLeKippElIsLdp~~i~~vd~~~~~~~k~e~~~~~~ 473 (545)
T KOG1272|consen 423 FETRKQRQEKEVRSLLEKIPPELISLDPRVIGIVDEPSLEEKKDEIERLFE 473 (545)
T ss_pred chhhhHHhHHHHHHHHhhCChHhEEechhhccccCcccchhhHHHHHHHhc
Confidence 9999999 899999999999999988 2444454 445555553
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-17 Score=162.88 Aligned_cols=152 Identities=17% Similarity=0.180 Sum_probs=120.4
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCC-CCEEEEEEecCCeEEEEEcCCCce--e
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPD-GQYVLSTGIYKPRVRCYETDNLSM--K 81 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpD-G~~LlatG~~d~~IrvwDl~~lsl--k 81 (358)
-++||++.+..|. +. ..++|.| .|.+.+.++.|+|. ...-+|||++||+|++|++.+... .
T Consensus 191 aT~swsG~~kvW~~~~--------------~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~ 256 (459)
T KOG0272|consen 191 ATGSWSGLVKVWSVPQ--------------CNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQD 256 (459)
T ss_pred EEeecCCceeEeecCC--------------cceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhh
Confidence 4788889999997 32 2567777 48899999999998 343458999999999999987322 2
Q ss_pred eeeeccCceEEEEE---------ee-------------------cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 82 FERCFDSEVVTFEI---------LS-------------------DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 82 ~~r~~d~e~v~f~~---------LS-------------------~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
++.|. ..+.+..+ -| .+|+.+|.+|+|+|+|.+++|||-|..-+|||+|++
T Consensus 257 l~gH~-~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtg 335 (459)
T KOG0272|consen 257 LEGHL-ARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTG 335 (459)
T ss_pred hhcch-hhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccC
Confidence 34444 33322111 11 122378999999999999999999999999999999
Q ss_pred ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 134 VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++..|.+|..+| .+|+|+|+|-.|+| +| ++||||++..+
T Consensus 336 r~im~L~gH~k~I-----------------~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~ 378 (459)
T KOG0272|consen 336 RCIMFLAGHIKEI-----------------LSVAFSPNGYHLATGSSDNTCKVWDLRMRS 378 (459)
T ss_pred cEEEEecccccce-----------------eeEeECCCceEEeecCCCCcEEEeeecccc
Confidence 9999999998887 88999999999996 68 99999998654
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.6e-17 Score=166.85 Aligned_cols=117 Identities=23% Similarity=0.294 Sum_probs=100.8
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC--ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL--SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l--slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
-+|...|++++|||||++| ++|+.|.+|+|||+.+. .++.. .+|+..|++|+|+|+++++++|
T Consensus 200 ~~h~~~v~~~~fs~d~~~l-~s~s~D~tiriwd~~~~~~~~~~l--------------~gH~~~v~~~~f~p~g~~i~Sg 264 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSYL-LSGSDDKTLRIWDLKDDGRNLKTL--------------KGHSTYVTSVAFSPDGNLLVSG 264 (456)
T ss_pred cccccceeeeEECCCCcEE-EEecCCceEEEeeccCCCeEEEEe--------------cCCCCceEEEEecCCCCEEEEe
Confidence 3577889999999999976 67889999999999432 12211 1334679999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.|++|++||+++++++.+|.+|.+.+ +.+.|+++++.|++ .| .|+|||..+|.
T Consensus 265 s~D~tvriWd~~~~~~~~~l~~hs~~i-----------------s~~~f~~d~~~l~s~s~d~~i~vwd~~~~~ 321 (456)
T KOG0266|consen 265 SDDGTVRIWDVRTGECVRKLKGHSDGI-----------------SGLAFSPDGNLLVSASYDGTIRVWDLETGS 321 (456)
T ss_pred cCCCcEEEEeccCCeEEEeeeccCCce-----------------EEEEECCCCCEEEEcCCCccEEEEECCCCc
Confidence 999999999999999999999999887 78999999999997 47 99999999987
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.9e-18 Score=173.42 Aligned_cols=138 Identities=18% Similarity=0.227 Sum_probs=114.7
Q ss_pred EEEEeecCCceeeee-ec--cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 5 YCYQTNWHKQAVTLV-II--GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~--~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
|=-|+|.|++|.+|. .. -.|.+. .|-.-|.||+|.|++.|+ +||+.|.+||+||+.+...
T Consensus 507 YFatas~D~tArLWs~d~~~PlRifa---------------ghlsDV~cv~FHPNs~Y~-aTGSsD~tVRlWDv~~G~~- 569 (707)
T KOG0263|consen 507 YFATASHDQTARLWSTDHNKPLRIFA---------------GHLSDVDCVSFHPNSNYV-ATGSSDRTVRLWDVSTGNS- 569 (707)
T ss_pred EEEecCCCceeeeeecccCCchhhhc---------------ccccccceEEECCccccc-ccCCCCceEEEEEcCCCcE-
Confidence 566889999999999 32 222222 244669999999999997 7899999999999987532
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
-| ++ .+|++.|.+++|||+|..||+|++||.|.+||+.+++.+..+.+|.+.+
T Consensus 570 -VR----------iF-~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti--------------- 622 (707)
T KOG0263|consen 570 -VR----------IF-TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTI--------------- 622 (707)
T ss_pred -EE----------Ee-cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCce---------------
Confidence 11 11 2355899999999999999999999999999999999999999997776
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
.+|.|+.+|..|++ +| +|++||+..
T Consensus 623 --~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 623 --YSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred --eEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 88999999999997 78 999999975
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.9e-17 Score=167.69 Aligned_cols=131 Identities=17% Similarity=0.244 Sum_probs=109.3
Q ss_pred EeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCce---------EEEEEeecCCC--------
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEV---------VTFEILSDDYS-------- 101 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~---------v~f~~LS~D~s-------- 101 (358)
...|.++|..++|+||.+||+ +|+.|.+||+|.+.+.+.- +..|. .++ ..|...|.|-+
T Consensus 447 L~GH~GPVyg~sFsPd~rfLl-ScSED~svRLWsl~t~s~~V~y~GH~-~PVwdV~F~P~GyYFatas~D~tArLWs~d~ 524 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFLL-SCSEDSSVRLWSLDTWSCLVIYKGHL-APVWDVQFAPRGYYFATASHDQTARLWSTDH 524 (707)
T ss_pred eecCCCceeeeeeccccccee-eccCCcceeeeecccceeEEEecCCC-cceeeEEecCCceEEEecCCCceeeeeeccc
Confidence 557899999999999999986 5678999999999876543 33332 332 22344444533
Q ss_pred -----------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC
Q psy2085 102 -----------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE 170 (358)
Q Consensus 102 -----------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~ 170 (358)
+.|.||.|+|+..++||||.|.||++||..+|..+..+.+|.++| .+|+|||
T Consensus 525 ~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V-----------------~al~~Sp 587 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPV-----------------TALAFSP 587 (707)
T ss_pred CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCce-----------------EEEEEcC
Confidence 789999999999999999999999999999999999999999998 7899999
Q ss_pred CCCEEEEe--c-ceEEEECCCCc
Q psy2085 171 EEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 171 d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+|.+|+|+ | .|+|||+.+|+
T Consensus 588 ~Gr~LaSg~ed~~I~iWDl~~~~ 610 (707)
T KOG0263|consen 588 CGRYLASGDEDGLIKIWDLANGS 610 (707)
T ss_pred CCceEeecccCCcEEEEEcCCCc
Confidence 99999995 4 99999999987
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=8.2e-16 Score=156.87 Aligned_cols=144 Identities=22% Similarity=0.254 Sum_probs=116.6
Q ss_pred ceEEEEeecCCceeeeee-ccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 3 VEYCYQTNWHKQAVTLVI-IGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
..|..+++.|+++..|+. ...+ +++.+ .|+..|++++|+|+|+ ++++|++|++|+|||+.+..
T Consensus 215 ~~~l~s~s~D~tiriwd~~~~~~-------------~~~~l~gH~~~v~~~~f~p~g~-~i~Sgs~D~tvriWd~~~~~- 279 (456)
T KOG0266|consen 215 GSYLLSGSDDKTLRIWDLKDDGR-------------NLKTLKGHSTYVTSVAFSPDGN-LLVSGSDDGTVRIWDVRTGE- 279 (456)
T ss_pred CcEEEEecCCceEEEeeccCCCe-------------EEEEecCCCCceEEEEecCCCC-EEEEecCCCcEEEEeccCCe-
Confidence 458899999999999993 4432 33444 5888999999999995 56889999999999999732
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCc--cccccCCCccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNC--ISNERDTEEKE 156 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~--v~~~~~i~gl~ 156 (358)
+.+.+. .++++|++|+|++++++|++|+.||+|++||+.++. ++..+..+..+ +
T Consensus 280 -~~~~l~-----------~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~---------- 337 (456)
T KOG0266|consen 280 -CVRKLK-----------GHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPV---------- 337 (456)
T ss_pred -EEEeee-----------ccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCce----------
Confidence 233321 233789999999999999999999999999999999 56777665443 3
Q ss_pred cccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+.|+|++.+|++ .| ++++||+.++.
T Consensus 338 -------~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~ 367 (456)
T KOG0266|consen 338 -------TSVQFSPNGKYLLSASLDRTLKLWDLRSGK 367 (456)
T ss_pred -------eEEEECCCCcEEEEecCCCeEEEEEccCCc
Confidence 78999999999997 46 99999999887
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-16 Score=145.68 Aligned_cols=143 Identities=15% Similarity=0.189 Sum_probs=111.3
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCC-CEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDG-QYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG-~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
..++|-|+++.+|.-...-++. + ++-.+.+.|+||+|+|+. +-+++++++|++|||||+.+..++...
T Consensus 120 ivSGSrDkTiklwnt~g~ck~t----------~-~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 120 IVSGSRDKTIKLWNTLGVCKYT----------I-HEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred eecCCCcceeeeeeecccEEEE----------E-ecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcc
Confidence 5688999999999933332111 1 111125789999999985 556678889999999999986543211
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
+.+++.||.|++||+|.++|+|+.||.+-+||++.++++.+++. ..+| +
T Consensus 189 -------------~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a-~~~v-----------------~ 237 (315)
T KOG0279|consen 189 -------------IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEA-FDIV-----------------N 237 (315)
T ss_pred -------------ccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccC-CCeE-----------------e
Confidence 12347899999999999999999999999999999999999974 5555 8
Q ss_pred eeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 165 SEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 165 sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
++.|+|+.-.|.. .+ .|||||++++.
T Consensus 238 sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 238 SLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred eEEecCCceeEeeccCCceEEEeccchh
Confidence 8999998766654 46 99999999887
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.1e-16 Score=151.10 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=117.7
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--ee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~ 83 (358)
.-|.|.|+.++-|+-..+ .+++--..|..+|+||+|--+| ++.+|++|++||+|+.....+- +.
T Consensus 220 las~skDg~vrIWd~~~~------------~~~~~lsgHT~~VTCvrwGG~g--liySgS~DrtIkvw~a~dG~~~r~lk 285 (480)
T KOG0271|consen 220 LASSSKDGSVRIWDTKLG------------TCVRTLSGHTASVTCVRWGGEG--LIYSGSQDRTIKVWRALDGKLCRELK 285 (480)
T ss_pred eecccCCCCEEEEEccCc------------eEEEEeccCccceEEEEEcCCc--eEEecCCCceEEEEEccchhHHHhhc
Confidence 345566777777774333 3455555788899999998776 6789999999999998762110 11
Q ss_pred eeccCceEE----------------------------------------------EEEeecCCC----------------
Q psy2085 84 RCFDSEVVT----------------------------------------------FEILSDDYS---------------- 101 (358)
Q Consensus 84 r~~d~e~v~----------------------------------------------f~~LS~D~s---------------- 101 (358)
.| +.-|. .+.-|+|++
T Consensus 286 GH--ahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rm 363 (480)
T KOG0271|consen 286 GH--AHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRM 363 (480)
T ss_pred cc--chheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhh
Confidence 11 11111 223344544
Q ss_pred ----CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 102 ----SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 102 ----~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.-||.+.|||++.++|+||-|..|++||.++|+-+.+|.+|-.++ ++|+|+.|.++|+|
T Consensus 364 tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~V-----------------YqvawsaDsRLlVS 426 (480)
T KOG0271|consen 364 TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAV-----------------YQVAWSADSRLLVS 426 (480)
T ss_pred hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhcccee-----------------EEEEeccCccEEEE
Confidence 579999999999999999999999999999999999999999887 89999999999997
Q ss_pred --ec-ceEEEECCCCc
Q psy2085 178 --SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 --aD-~IKIWD~~tG~ 190 (358)
.| ++|+||+++.+
T Consensus 427 ~SkDsTLKvw~V~tkK 442 (480)
T KOG0271|consen 427 GSKDSTLKVWDVRTKK 442 (480)
T ss_pred cCCCceEEEEEeeeee
Confidence 58 99999999877
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-15 Score=156.91 Aligned_cols=124 Identities=14% Similarity=0.161 Sum_probs=99.2
Q ss_pred eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEe
Q psy2085 43 EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs 120 (358)
.|.+.|++++|+| |+++| +||+.|++|+|||+.+..+. ........ .+ ..|...|.+|+|+|.+ ++|++|+
T Consensus 73 GH~~~V~~v~fsP~d~~~L-aSgS~DgtIkIWdi~~~~~~--~~~~~~l~---~L-~gH~~~V~~l~f~P~~~~iLaSgs 145 (493)
T PTZ00421 73 GQEGPIIDVAFNPFDPQKL-FTASEDGTIMGWGIPEEGLT--QNISDPIV---HL-QGHTKKVGIVSFHPSAMNVLASAG 145 (493)
T ss_pred CCCCCEEEEEEcCCCCCEE-EEEeCCCEEEEEecCCCccc--cccCcceE---Ee-cCCCCcEEEEEeCcCCCCEEEEEe
Confidence 4788999999999 88765 78889999999999754221 00001111 11 2344789999999985 6999999
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||+++++.+..+.+|...+ .+|+|+|+|.+|+| .| +|+|||+++|+
T Consensus 146 ~DgtVrIWDl~tg~~~~~l~~h~~~V-----------------~sla~spdG~lLatgs~Dg~IrIwD~rsg~ 201 (493)
T PTZ00421 146 ADMVVNVWDVERGKAVEVIKCHSDQI-----------------TSLEWNLDGSLLCTTSKDKKLNIIDPRDGT 201 (493)
T ss_pred CCCEEEEEECCCCeEEEEEcCCCCce-----------------EEEEEECCCCEEEEecCCCEEEEEECCCCc
Confidence 99999999999999999998887776 88999999999987 47 99999999987
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.9e-16 Score=152.10 Aligned_cols=109 Identities=17% Similarity=0.340 Sum_probs=94.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce--eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM--KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl--k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
|...||.|.|||||+|| |+++.|..||+||-.+... .|..|. +.|..|+|+.+..||++||.
T Consensus 366 Hq~lVn~V~fSPd~r~I-ASaSFDkSVkLW~g~tGk~lasfRGHv---------------~~VYqvawsaDsRLlVS~Sk 429 (480)
T KOG0271|consen 366 HQALVNHVSFSPDGRYI-ASASFDKSVKLWDGRTGKFLASFRGHV---------------AAVYQVAWSADSRLLVSGSK 429 (480)
T ss_pred hhhheeeEEECCCccEE-EEeecccceeeeeCCCcchhhhhhhcc---------------ceeEEEEeccCccEEEEcCC
Confidence 34579999999999987 7889999999999876431 133343 57899999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
|.|+++||+|+++...-|.+|.+.+ ..+.|+|||..++| .| .+|||-
T Consensus 430 DsTLKvw~V~tkKl~~DLpGh~DEV-----------------f~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 430 DSTLKVWDVRTKKLKQDLPGHADEV-----------------FAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred CceEEEEEeeeeeecccCCCCCceE-----------------EEEEecCCCceeecCCCceEEEeec
Confidence 9999999999999999999998887 78999999999998 68 999994
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-15 Score=152.36 Aligned_cols=151 Identities=12% Similarity=0.085 Sum_probs=113.9
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|+ +..+. .. .-.+.+..+ .|...|.+|+|+|++..++++|+.|++|+|||+.+....
T Consensus 89 ~~LaSgS~DgtIkIWdi~~~~~--~~-----~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~ 161 (493)
T PTZ00421 89 QKLFTASEDGTIMGWGIPEEGL--TQ-----NISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAV 161 (493)
T ss_pred CEEEEEeCCCEEEEEecCCCcc--cc-----ccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEE
Confidence 4788999999999999 32211 00 011334444 377889999999998656688889999999999864321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
. . + ..+...|++|+|+|++.+|++|+.||+|++||+|+++.+.++.+|.+...
T Consensus 162 ~--~----------l-~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~-------------- 214 (493)
T PTZ00421 162 E--V----------I-KCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKS-------------- 214 (493)
T ss_pred E--E----------E-cCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcc--------------
Confidence 1 1 1 12336799999999999999999999999999999999999988765421
Q ss_pred CceeeEEcCCCCEEEE------ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES------SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS------aD-~IKIWD~~tG~ 190 (358)
..+.|++++..|++ .| .|+|||+++..
T Consensus 215 --~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 215 --QRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred --eEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 45789998888875 26 89999998654
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.8e-16 Score=160.12 Aligned_cols=149 Identities=11% Similarity=0.116 Sum_probs=119.0
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEE---eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQD---FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqd---fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
.+--+||+|.++..|. +..+ +.+ .-|-+--. .-|.--||||+++|+.+ |+|||++|.+.+||+++++.
T Consensus 425 sffvsvS~D~tlK~W~l~~s~-----~~~--~~~~~~~~~t~~aHdKdIN~Vaia~ndk-LiAT~SqDktaKiW~le~~~ 496 (775)
T KOG0319|consen 425 SFFVSVSQDCTLKLWDLPKSK-----ETA--FPIVLTCRYTERAHDKDINCVAIAPNDK-LIATGSQDKTAKIWDLEQLR 496 (775)
T ss_pred cEEEEecCCceEEEecCCCcc-----ccc--ccceehhhHHHHhhcccccceEecCCCc-eEEecccccceeeecccCce
Confidence 4557899999999999 4311 111 11111111 12556799999999997 66999999999999999754
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
+. . .| .+|+.+|-||.|+|..+++||+|.|+||+||.+.+.+|+++|++|...|
T Consensus 497 l~--~----------vL-sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV------------- 550 (775)
T KOG0319|consen 497 LL--G----------VL-SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV------------- 550 (775)
T ss_pred EE--E----------Ee-eCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee-------------
Confidence 31 0 11 2345789999999999999999999999999999999999999999887
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..++|-.+|.+|+| +| .||||+++++.
T Consensus 551 ----lra~F~~~~~qliS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 551 ----LRASFIRNGKQLISAGADGLIKLWNIKTNE 580 (775)
T ss_pred ----EeeeeeeCCcEEEeccCCCcEEEEeccchh
Confidence 78999999999998 57 99999999988
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=143.33 Aligned_cols=192 Identities=21% Similarity=0.294 Sum_probs=141.9
Q ss_pred eEEEEeecCCceeeee----eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 4 EYCYQTNWHKQAVTLV----IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~----~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
.|.-|++.|+++++|. ......|| .|.++|..+.|++||..|+++|+ |.+|+.||+.+..
T Consensus 60 s~~aSgG~Dr~I~LWnv~gdceN~~~lk---------------gHsgAVM~l~~~~d~s~i~S~gt-Dk~v~~wD~~tG~ 123 (338)
T KOG0265|consen 60 SCFASGGSDRAIVLWNVYGDCENFWVLK---------------GHSGAVMELHGMRDGSHILSCGT-DKTVRGWDAETGK 123 (338)
T ss_pred CeEeecCCcceEEEEeccccccceeeec---------------cccceeEeeeeccCCCEEEEecC-CceEEEEecccce
Confidence 4667889999999999 34444444 57799999999999999987765 6799999999764
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.. |.+.. ++..||+|+-+..+ ++++||++|||+++||+|++.++.++......
T Consensus 124 ~~--rk~k~-----------h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyql------------- 177 (338)
T KOG0265|consen 124 RI--RKHKG-----------HTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQL------------- 177 (338)
T ss_pred ee--ehhcc-----------ccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeE-------------
Confidence 32 11111 11568988865554 58999999999999999999999988765443
Q ss_pred cCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc-EE----------ecCCCCCccccccchhHHhhhccccceeecce
Q psy2085 159 ASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK-TY----------NLGPAPKWCGFLDNLTEELEENIIENVYDDYK 224 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~-~y----------~lgpap~Wcsfldnlteele~~~~~~vyddy~ 224 (358)
+++.|..++..++|+ | .||+||++.+. +| .+...| -.+|| +++.|. ..-.++|--.
T Consensus 178 -----tAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~-~gs~l--lsnsMd--~tvrvwd~rp 247 (338)
T KOG0265|consen 178 -----TAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSR-YGSFL--LSNSMD--NTVRVWDVRP 247 (338)
T ss_pred -----EEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEecc-CCCcc--cccccc--ceEEEEEecc
Confidence 779999999999984 7 99999997766 33 111111 13344 455565 3567889888
Q ss_pred eeeHHHHhhc--CCCccccccceee
Q psy2085 225 FVTRQELEDL--GLGHLIGTSLLRA 247 (358)
Q Consensus 225 fvt~~~l~~l--~l~~ligt~~l~~ 247 (358)
|.+.+..-+. |..|-++-++|++
T Consensus 248 ~~p~~R~v~if~g~~hnfeknlL~c 272 (338)
T KOG0265|consen 248 FAPSQRCVKIFQGHIHNFEKNLLKC 272 (338)
T ss_pred cCCCCceEEEeecchhhhhhhccee
Confidence 9988873333 7888888888886
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.4e-15 Score=143.11 Aligned_cols=166 Identities=17% Similarity=0.086 Sum_probs=122.4
Q ss_pred ceEEEEeecCCceeeee-e---ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 3 VEYCYQTNWHKQAVTLV-I---IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~---~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
-.|+-+.|+|-++.+|+ + ..-|++. .|...|.+|+|-|-|.||+ ++++|.+|+.||+.++
T Consensus 162 Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~---------------gh~h~vS~V~f~P~gd~il-S~srD~tik~We~~tg 225 (406)
T KOG0295|consen 162 GKYLATCSSDLSAKLWDFDTFFRCIKSLI---------------GHEHGVSSVFFLPLGDHIL-SCSRDNTIKAWECDTG 225 (406)
T ss_pred ccEEEecCCccchhheeHHHHHHHHHHhc---------------CcccceeeEEEEecCCeee-ecccccceeEEecccc
Confidence 35788899999999999 3 2222322 2446799999999999985 5679999999999875
Q ss_pred ceeeeeeccCceEEEEEeecCCC-----------------------------CCeeEEEEcCC---------------CC
Q psy2085 79 SMKFERCFDSEVVTFEILSDDYS-----------------------------SELNSIAINPV---------------HQ 114 (358)
Q Consensus 79 slk~~r~~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~---------------~~ 114 (358)
-.+.......+-|...-...|++ ..|.||+|-|. ++
T Consensus 226 ~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~ 305 (406)
T KOG0295|consen 226 YCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQ 305 (406)
T ss_pred eeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCcc
Confidence 32211111233344333333333 67899999652 25
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEECCCCcE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTKEIKKT 191 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~~tG~~ 191 (358)
.+++|+.|++|++||+.++.++-+|.+|.+-| ..++|||.|++|+| +| +++|||++++++
T Consensus 306 ~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwV-----------------r~~af~p~Gkyi~ScaDDktlrvwdl~~~~c 368 (406)
T KOG0295|consen 306 VLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWV-----------------RGVAFSPGGKYILSCADDKTLRVWDLKNLQC 368 (406)
T ss_pred EEEeecccceEEEEeccCCeEEEEEeccccee-----------------eeeEEcCCCeEEEEEecCCcEEEEEecccee
Confidence 89999999999999999999999999998877 78999999999998 66 999999999884
Q ss_pred E-ecCCCCCcc
Q psy2085 192 Y-NLGPAPKWC 201 (358)
Q Consensus 192 y-~lgpap~Wc 201 (358)
- .+.|.+-.+
T Consensus 369 mk~~~ah~hfv 379 (406)
T KOG0295|consen 369 MKTLEAHEHFV 379 (406)
T ss_pred eeccCCCccee
Confidence 4 444333333
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.8e-14 Score=150.16 Aligned_cols=153 Identities=10% Similarity=0.069 Sum_probs=111.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|+ +........ -.+.+..+ .|...|++|+|+|+|.++++||+.|++|+|||+.+....
T Consensus 88 ~lLASgS~DgtIrIWDi~t~~~~~~~------i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~ 161 (568)
T PTZ00420 88 EILASGSEDLTIRVWEIPHNDESVKE------IKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRA 161 (568)
T ss_pred CEEEEEeCCCeEEEEECCCCCccccc------cccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 4678999999999999 432211110 01223333 377889999999999999889999999999999865322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+.. . +...|.+++|+|++.+|++|+.||+|++||+|+++.+.++.+|.+.+... .+
T Consensus 162 ~~i------------~--~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~-~v--------- 217 (568)
T PTZ00420 162 FQI------------N--MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTK-NI--------- 217 (568)
T ss_pred EEE------------e--cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeE-EE---------
Confidence 111 0 11569999999999999999999999999999999999999887653110 00
Q ss_pred CceeeEEcCCCCEEEEe--c-----ceEEEECCC
Q psy2085 162 DESSEEEEEEEEEEESS--D-----DDQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llSa--D-----~IKIWD~~t 188 (358)
....|++++.+|+|+ | +|+|||+++
T Consensus 218 --~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~ 249 (568)
T PTZ00420 218 --WIDGLGGDDNYILSTGFSKNNMREMKLWDLKN 249 (568)
T ss_pred --EeeeEcCCCCEEEEEEcCCCCccEEEEEECCC
Confidence 113456888888862 2 599999985
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-15 Score=137.86 Aligned_cols=142 Identities=16% Similarity=0.254 Sum_probs=112.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC-CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG-VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~-~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+.-+.|+|-++..|-...+ .++..+.|++ -||.+.++||+++|+|.| + +.||+||++..+.
T Consensus 11 viLvsA~YDhTIRfWqa~tG-------------~C~rTiqh~dsqVNrLeiTpdk~~LAaa~-~-qhvRlyD~~S~np-- 73 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTG-------------ICSRTIQHPDSQVNRLEITPDKKDLAAAG-N-QHVRLYDLNSNNP-- 73 (311)
T ss_pred eEEEeccCcceeeeeehhcC-------------eEEEEEecCccceeeEEEcCCcchhhhcc-C-CeeEEEEccCCCC--
Confidence 46678899999999995444 2778888874 699999999999986654 4 6899999986542
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.++..|. .++..|.+|.|.-++..+.|||+||+|+|||+|+..+-..+.. .++|
T Consensus 74 -----~Pv~t~e----~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~-~spV---------------- 127 (311)
T KOG0315|consen 74 -----NPVATFE----GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQH-NSPV---------------- 127 (311)
T ss_pred -----CceeEEe----ccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccC-CCCc----------------
Confidence 1222222 1225799999999999999999999999999999766665653 3565
Q ss_pred ceeeEEcCCCCEEEEec---ceEEEECCCC
Q psy2085 163 ESSEEEEEEEEEEESSD---DDQAWTKEIK 189 (358)
Q Consensus 163 P~sI~fs~d~~~llSaD---~IKIWD~~tG 189 (358)
++|..||+...|+|+| .|+|||+.+.
T Consensus 128 -n~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 128 -NTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred -ceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 8899999999999988 9999999764
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=156.69 Aligned_cols=199 Identities=19% Similarity=0.235 Sum_probs=150.6
Q ss_pred eEEEEeeCC-CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 37 ELIQDFEMP-GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 37 eliqdfe~~-~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
++|+.+... ..|..+.|+..|.||+..|+-=|++-||++...+ +|.+.|. ..|+|++++|+|
T Consensus 298 ~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~---------------~~i~~l~YSpDg 362 (893)
T KOG0291|consen 298 NLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHS---------------DRITSLAYSPDG 362 (893)
T ss_pred eEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccc---------------cceeeEEECCCC
Confidence 344444333 4678889999999996655545899999998643 3333333 579999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+++|||++||.|++||.+++-|+.++.-|.+.+ +.++|+..|+.|+| .| +|+.||+..++
T Consensus 363 q~iaTG~eDgKVKvWn~~SgfC~vTFteHts~V-----------------t~v~f~~~g~~llssSLDGtVRAwDlkRYr 425 (893)
T KOG0291|consen 363 QLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGV-----------------TAVQFTARGNVLLSSSLDGTVRAWDLKRYR 425 (893)
T ss_pred cEEEeccCCCcEEEEeccCceEEEEeccCCCce-----------------EEEEEEecCCEEEEeecCCeEEeeeecccc
Confidence 999999999999999999999999999999887 77999999999996 58 99999999888
Q ss_pred EE--ecCCCCCc--cccccchhHHhhhccccceeecce--eeeHHHHhhc-CCCccccccceeecccccccchHHHHHhh
Q psy2085 191 TY--NLGPAPKW--CGFLDNLTEELEENIIENVYDDYK--FVTRQELEDL-GLGHLIGTSLLRAYMHGFFMDIRLYRKAK 263 (358)
Q Consensus 191 ~y--~lgpap~W--csfldnlteele~~~~~~vyddy~--fvt~~~l~~l-~l~~ligt~~l~~ymhg~fi~~~ly~~~~ 263 (358)
.| =.+|+|.= |--.| -..|+-......+|+-|. +-|.+.|+-| |.+.-|-+-.+.| ||--+....|++..
T Consensus 426 NfRTft~P~p~QfscvavD-~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~--~~~~LaS~SWDkTV 502 (893)
T KOG0291|consen 426 NFRTFTSPEPIQFSCVAVD-PSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSP--DGSLLASGSWDKTV 502 (893)
T ss_pred eeeeecCCCceeeeEEEEc-CCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEcc--ccCeEEeccccceE
Confidence 66 23577752 22111 111222223455666543 3588888888 8877776767888 88899999999999
Q ss_pred hccCChh
Q psy2085 264 SVSAPFE 270 (358)
Q Consensus 264 ~~~~p~~ 270 (358)
.+.|-|+
T Consensus 503 RiW~if~ 509 (893)
T KOG0291|consen 503 RIWDIFS 509 (893)
T ss_pred EEEEeec
Confidence 9998885
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.9e-15 Score=146.46 Aligned_cols=185 Identities=15% Similarity=0.135 Sum_probs=133.0
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.-+..+++.+.+++.|+-+..-.- ..-+.....|. |...|+.|+|+|-.+.|+++.++++.+.|||+++...+
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~------~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~ 263 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKE------DKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSK 263 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccC------CccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCC
Confidence 346788889999999993222100 12234455564 88899999999999999999999999999999953222
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCcccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
..... +.+++.|||++|||- ..+|||||.||+|.+||+|.- +++.++.+|...+
T Consensus 264 ~~~~~-----------~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev------------- 319 (422)
T KOG0264|consen 264 PSHSV-----------KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEV------------- 319 (422)
T ss_pred Ccccc-----------cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcce-------------
Confidence 22111 123378999999996 569999999999999999974 5789999998887
Q ss_pred CCCceeeEEcCCCCEEE-E--ec-ceEEEECCC-Cc--------------EE-----ecCCCC-CccccccchhHHhhhc
Q psy2085 160 SSDESSEEEEEEEEEEE-S--SD-DDQAWTKEI-KK--------------TY-----NLGPAP-KWCGFLDNLTEELEEN 214 (358)
Q Consensus 160 s~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~t-G~--------------~y-----~lgpap-~Wcsfldnlteele~~ 214 (358)
.+|.|+|....|+ | .| .+.|||+.. |+ -| ...... .||.+-.+++...+|+
T Consensus 320 ----~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeD 395 (422)
T KOG0264|consen 320 ----FQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAED 395 (422)
T ss_pred ----EEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCC
Confidence 8899999877666 4 58 999999964 32 12 111222 2666666666666766
Q ss_pred cccceee
Q psy2085 215 IIENVYD 221 (358)
Q Consensus 215 ~~~~vyd 221 (358)
+...|++
T Consensus 396 N~LqIW~ 402 (422)
T KOG0264|consen 396 NILQIWQ 402 (422)
T ss_pred ceEEEee
Confidence 5555544
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.8e-15 Score=152.27 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=127.5
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
-|.++.|-|+++..|+ +++- .+-|.|+ |..-|-+|+|.|....-+|+++-|.+||||.+.+...-
T Consensus 110 P~vLtsSDDm~iKlW~we~~w-------------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~n 176 (794)
T KOG0276|consen 110 PYVLTSSDDMTIKLWDWENEW-------------ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPN 176 (794)
T ss_pred CeEEecCCccEEEEeeccCce-------------eeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCc
Confidence 4889999999999999 6544 6889997 88889999999976666789999999999999864321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCC--CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVH--QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~--~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
|. + ..|..+||||++-+.+ ++|+||++|.+|++||..+++|+.+|.+|.+.+
T Consensus 177 fT-----------l--~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nv------------- 230 (794)
T KOG0276|consen 177 FT-----------L--EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNV------------- 230 (794)
T ss_pred ee-----------e--eccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccc-------------
Confidence 11 0 1223789999997754 699999999999999999999999999999887
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc---EEecCCCCCccc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK---TYNLGPAPKWCG 202 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~---~y~lgpap~Wcs 202 (358)
..+.|||.-..|+| -| +||||+..|-+ ++.+|--..||=
T Consensus 231 ----s~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I 275 (794)
T KOG0276|consen 231 ----SFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCI 275 (794)
T ss_pred ----eEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEE
Confidence 77999999999998 47 99999998754 335566666763
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=150.19 Aligned_cols=129 Identities=13% Similarity=0.206 Sum_probs=96.3
Q ss_pred EEEEe-eCCCCEeEEEEcCC-CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-
Q psy2085 38 LIQDF-EMPGVSTSVRISPD-GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ- 114 (358)
Q Consensus 38 liqdf-e~~~~v~~v~~SpD-G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~- 114 (358)
.+..+ .|.+.|.+|+|+|+ +. +++||+.|++|+|||+.+....... . .+.+ ..+ ..|...|++|+|+|++.
T Consensus 66 ~v~~L~gH~~~V~~lafsP~~~~-lLASgS~DgtIrIWDi~t~~~~~~~-i-~~p~--~~L-~gH~~~V~sVaf~P~g~~ 139 (568)
T PTZ00420 66 PVIKLKGHTSSILDLQFNPCFSE-ILASGSEDLTIRVWEIPHNDESVKE-I-KDPQ--CIL-KGHKKKISIIDWNPMNYY 139 (568)
T ss_pred eEEEEcCCCCCEEEEEEcCCCCC-EEEEEeCCCeEEEEECCCCCccccc-c-ccce--EEe-ecCCCcEEEEEECCCCCe
Confidence 34445 47889999999997 55 4578889999999999753211000 0 0010 111 23447899999999876
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|++||.||+|++||+++++.+..+..+ ..+ .+++|+|+|.+|++ .| +|+|||+++|+
T Consensus 140 iLaSgS~DgtIrIWDl~tg~~~~~i~~~-~~V-----------------~SlswspdG~lLat~s~D~~IrIwD~Rsg~ 200 (568)
T PTZ00420 140 IMCSSGFDSFVNIWDIENEKRAFQINMP-KKL-----------------SSLKWNIKGNLLSGTCVGKHMHIIDPRKQE 200 (568)
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecC-CcE-----------------EEEEECCCCCEEEEEecCCEEEEEECCCCc
Confidence 5689999999999999999887777633 334 78999999999986 37 99999999887
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-14 Score=136.54 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=114.7
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
..+.|+|++-+.|+ |+.+ +++.|. |.+-|-++.++| +++.. ++|+-|...+|||++....+
T Consensus 159 ilT~SGD~TCalWDie~g~--------------~~~~f~GH~gDV~slsl~p~~~ntF-vSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 159 ILTGSGDMTCALWDIETGQ--------------QTQVFHGHTGDVMSLSLSPSDGNTF-VSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred eEecCCCceEEEEEcccce--------------EEEEecCCcccEEEEecCCCCCCeE-EecccccceeeeeccCcceeE
Confidence 57899999999999 6665 577774 889999999999 88865 67777899999999875322
Q ss_pred -eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 82 -FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 82 -~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
|.. +.+.||+|.|.|+|.-||||++|++.+++|+|..+.+..+.... .+ +.+
T Consensus 224 tF~g---------------hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~-~~---~gi-------- 276 (343)
T KOG0286|consen 224 TFEG---------------HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDS-II---CGI-------- 276 (343)
T ss_pred eecc---------------cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCc-cc---CCc--------
Confidence 222 22679999999999999999999999999999999998887322 11 112
Q ss_pred CCceeeEEcCCCCEEEE-e-c-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES-S-D-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG~ 190 (358)
++|+||-.|++|++ + | ++.+||.-.|+
T Consensus 277 ---tSv~FS~SGRlLfagy~d~~c~vWDtlk~e 306 (343)
T KOG0286|consen 277 ---TSVAFSKSGRLLFAGYDDFTCNVWDTLKGE 306 (343)
T ss_pred ---eeEEEcccccEEEeeecCCceeEeeccccc
Confidence 89999999999997 4 5 99999998877
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.2e-14 Score=140.78 Aligned_cols=152 Identities=18% Similarity=0.210 Sum_probs=115.1
Q ss_pred EEEeecCCceeeee---------e---ccCcccCC-CcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEE
Q psy2085 6 CYQTNWHKQAVTLV---------I---IGGRYLLP-TNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRC 72 (358)
Q Consensus 6 ~~~~~~~~~~~~~~---------~---~~~r~lk~-d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~Irv 72 (358)
.+|+|||.++.-|. | ++.|+.++ .++-..|.-++---.|.+.|.+|-|++.+ .+-++++|.+|++
T Consensus 208 ~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~--v~yS~SwDHTIk~ 285 (423)
T KOG0313|consen 208 FCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDAT--VIYSVSWDHTIKV 285 (423)
T ss_pred EEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCC--ceEeecccceEEE
Confidence 57999999999998 1 33333433 33333443344333599999999999954 3467889999999
Q ss_pred EEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccc
Q psy2085 73 YETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNE 149 (358)
Q Consensus 73 wDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~ 149 (358)
||+.....+-..... ..+|||+.+|...|||+||.|..+++||||++.- ..+|.+|.+-|
T Consensus 286 WDletg~~~~~~~~~--------------ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwV--- 348 (423)
T KOG0313|consen 286 WDLETGGLKSTLTTN--------------KSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWV--- 348 (423)
T ss_pred EEeecccceeeeecC--------------cceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhh---
Confidence 999876544322211 4689999999999999999999999999999853 46777888766
Q ss_pred cCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 150 RDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 150 ~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
.++.|||...+++ | .| ++|+||+++-+
T Consensus 349 --------------ssvkwsp~~~~~~~S~S~D~t~klWDvRS~k 379 (423)
T KOG0313|consen 349 --------------SSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK 379 (423)
T ss_pred --------------hheecCCCCceEEEEEecCCeEEEEEeccCC
Confidence 6799999887665 4 68 99999999755
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.4e-14 Score=133.36 Aligned_cols=158 Identities=18% Similarity=0.241 Sum_probs=121.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce--
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM-- 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl-- 80 (358)
.||.+...||++.+|.+..+ -||+.+. |...|..++.|.|...+++ |+-|..|.+||+++...
T Consensus 30 nY~ltcGsdrtvrLWNp~rg-------------~liktYsghG~EVlD~~~s~Dnskf~s-~GgDk~v~vwDV~TGkv~R 95 (307)
T KOG0316|consen 30 NYCLTCGSDRTVRLWNPLRG-------------ALIKTYSGHGHEVLDAALSSDNSKFAS-CGGDKAVQVWDVNTGKVDR 95 (307)
T ss_pred CEEEEcCCCceEEeeccccc-------------ceeeeecCCCceeeecccccccccccc-CCCCceEEEEEcccCeeee
Confidence 69999999999999997555 5777774 6678999999999988755 55678999999997642
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccc---------
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNE--------- 149 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~--------- 149 (358)
+|..|. +.||+|.||.+...+++||-|.+|++||-|++. ++++|+-..+.+.+.
T Consensus 96 r~rgH~---------------aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIva 160 (307)
T KOG0316|consen 96 RFRGHL---------------AQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVA 160 (307)
T ss_pred eccccc---------------ceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEe
Confidence 232222 679999999999999999999999999999875 677777555444221
Q ss_pred cCCCccc-------cc----cCCCc-eeeEEcCCCCEEE--Eec-ceEEEECCCCc
Q psy2085 150 RDTEEKE-------GK----ASSDE-SSEEEEEEEEEEE--SSD-DDQAWTKEIKK 190 (358)
Q Consensus 150 ~~i~gl~-------Gt----Rs~~P-~sI~fs~d~~~ll--SaD-~IKIWD~~tG~ 190 (358)
.+++|-. |+ --..| +++.|+++++.++ +.| ++++-|..||+
T Consensus 161 GS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGk 216 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGK 216 (307)
T ss_pred eccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeeecccchhH
Confidence 1222211 22 12356 9999999999876 378 99999999999
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.7e-15 Score=146.29 Aligned_cols=129 Identities=18% Similarity=0.234 Sum_probs=107.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCc---------eEEEEEeecCCC------------
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSE---------VVTFEILSDDYS------------ 101 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e---------~v~f~~LS~D~s------------ 101 (358)
|..+|+++.||++|.++ .||+.++.||+|+.+....| +.+|.+.. ...|+..|+|.+
T Consensus 137 HDs~Vr~m~ws~~g~wm-iSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee 215 (464)
T KOG0284|consen 137 HDSPVRTMKWSHNGTWM-ISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE 215 (464)
T ss_pred hcccceeEEEccCCCEE-EEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh
Confidence 56789999999999997 57889999999998754333 33443221 234666777765
Q ss_pred -------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 102 -------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 102 -------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
-.|.||+|+|.-.+||+||.|..|++||+|+++|+.+|.+|.+.| ..+.|++++++
T Consensus 216 ~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntV-----------------l~~~f~~n~N~ 278 (464)
T KOG0284|consen 216 RVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTV-----------------LAVKFNPNGNW 278 (464)
T ss_pred heeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceE-----------------EEEEEcCCCCe
Confidence 359999999999999999999999999999999999999999988 88999999999
Q ss_pred EEE--ec-ceEEEECCCCc
Q psy2085 175 EES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 175 llS--aD-~IKIWD~~tG~ 190 (358)
|+| -| .+|++|+++-+
T Consensus 279 Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 279 LLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred eEEccCCceEEEEehhHhH
Confidence 997 47 99999998644
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1e-14 Score=141.29 Aligned_cols=203 Identities=21% Similarity=0.289 Sum_probs=133.8
Q ss_pred EEEeecCCc---eeeee-eccCcccCCCcccccceeEEEE-----------e-eCCCCEeEEEEcCCCCEEEEEEecCCe
Q psy2085 6 CYQTNWHKQ---AVTLV-IIGGRYLLPTNDIRRRIELIQD-----------F-EMPGVSTSVRISPDGQYVLSTGIYKPR 69 (358)
Q Consensus 6 ~~~~~~~~~---~~~~~-~~~~r~lk~d~~~~~rIeliqd-----------f-e~~~~v~~v~~SpDG~~LlatG~~d~~ 69 (358)
.|++++||. +-.|- ...+|.|..|-. +-|-+-+. | .|..+|-.++|||...-++|||+-|+.
T Consensus 204 l~t~~ghk~EGy~LdWSp~~~g~LlsGDc~--~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dgs 281 (440)
T KOG0302|consen 204 LFTFNGHKGEGYGLDWSPIKTGRLLSGDCV--KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGS 281 (440)
T ss_pred eEEecccCccceeeecccccccccccCccc--cceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCce
Confidence 466666665 45566 466777755442 22222221 1 255678899999999999999999999
Q ss_pred EEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC---CceeEEEeCCCCcc
Q psy2085 70 VRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM---KVKAGTLDCAFNCI 146 (358)
Q Consensus 70 IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs---~~~i~~L~~~~~~v 146 (358)
|+|||++....+. +++..-+.+.||+|+||..-.+||+|++||+++|||+|+ +++++++.-|..+|
T Consensus 282 IrIWDiRs~~~~~-----------~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pI 350 (440)
T KOG0302|consen 282 IRIWDIRSGPKKA-----------AVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPI 350 (440)
T ss_pred EEEEEecCCCccc-----------eeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCe
Confidence 9999998642110 111112226799999999988999999999999999996 56789999999888
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEE--E-ec-ceEEEECCCCcEEecCCCCCccccccchhHHhhhccccc---e
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEE--S-SD-DDQAWTKEIKKTYNLGPAPKWCGFLDNLTEELEENIIEN---V 219 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll--S-aD-~IKIWD~~tG~~y~lgpap~Wcsfldnlteele~~~~~~---v 219 (358)
++|.|||....++ | +| .|.|||+..- +.+ ||.......+ +
T Consensus 351 -----------------tsieW~p~e~s~iaasg~D~QitiWDlsvE------~D~----------ee~~~~a~~~L~dl 397 (440)
T KOG0302|consen 351 -----------------TSIEWHPHEDSVIAASGEDNQITIWDLSVE------ADE----------EEIDQEAAEGLQDL 397 (440)
T ss_pred -----------------eEEEeccccCceEEeccCCCcEEEEEeecc------CCh----------hhhccccccchhcC
Confidence 8899999765444 3 67 9999999532 111 1111111111 1
Q ss_pred eecceeee--HHHHhhcCCCccccccceeeccccccc
Q psy2085 220 YDDYKFVT--RQELEDLGLGHLIGTSLLRAYMHGFFM 254 (358)
Q Consensus 220 yddy~fvt--~~~l~~l~l~~ligt~~l~~ymhg~fi 254 (358)
=-..-||- ..|++.+.-..-|..-++.--|.||.|
T Consensus 398 PpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfnV 434 (440)
T KOG0302|consen 398 PPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFNV 434 (440)
T ss_pred CceeEEEecchhHhhhheeccCCCCeEEEecccceeE
Confidence 12345663 566667765555555555556666653
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.9e-15 Score=145.43 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=115.2
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.+|.+-|..+..|. -..+ .++++|. |..+|..++||++|..++ |++||..|++||+++...+..
T Consensus 230 lLS~gmD~~vklW~vy~~~-------------~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~lKlwDtETG~~~~~ 295 (503)
T KOG0282|consen 230 LLSGGMDGLVKLWNVYDDR-------------RCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFLKLWDTETGQVLSR 295 (503)
T ss_pred EEecCCCceEEEEEEecCc-------------ceehhhhcchhhhhhhhccccCCeee-eeecceeeeeeccccceEEEE
Confidence 45666677777777 2222 4777884 788999999999999875 567999999999998765544
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.+.+ ..++|+.|+|++ ++|.+|+.||.|+.||+|+++.+...+-|.+++
T Consensus 296 f~~~--------------~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i---------------- 345 (503)
T KOG0282|consen 296 FHLD--------------KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAI---------------- 345 (503)
T ss_pred EecC--------------CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhhe----------------
Confidence 4443 357899999997 899999999999999999999998888888877
Q ss_pred ceeeEEcCCCCEEEE-ec--ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES-SD--DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS-aD--~IKIWD~~tG~ 190 (358)
.+|.|-++|.+.+| +| +++||+-..+-
T Consensus 346 -~~i~F~~~g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 346 -LDITFVDEGRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred -eeeEEccCCceEeeeccCccEEEEEcCCCc
Confidence 88999999998886 66 99999998765
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=8.2e-14 Score=139.51 Aligned_cols=161 Identities=15% Similarity=0.120 Sum_probs=118.9
Q ss_pred cceEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecC---CeEEEEEcCC
Q psy2085 2 SVEYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYK---PRVRCYETDN 77 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d---~~IrvwDl~~ 77 (358)
+-.||.|+--.+.+.-|+ ..+..-||+.. | -+.+.|..|+|++||+.|+|.|.-. +.+-.||.-+
T Consensus 70 sG~yiASGD~sG~vRIWdtt~~~hiLKnef---------~--v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~ 138 (603)
T KOG0318|consen 70 SGFYIASGDVSGKVRIWDTTQKEHILKNEF---------Q--VLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGN 138 (603)
T ss_pred CceEEeecCCcCcEEEEeccCcceeeeeee---------e--ecccccccceeCCCCcEEEEEecCccceeEEEEecCCC
Confidence 347999999999999999 45443333322 1 1568899999999999999998544 3577888654
Q ss_pred Cceeeeeec---c------CceEEEEEeec-------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEe
Q psy2085 78 LSMKFERCF---D------SEVVTFEILSD-------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWD 129 (358)
Q Consensus 78 lslk~~r~~---d------~e~v~f~~LS~-------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD 129 (358)
..-.+..|- . +........|+ +|+..|||+.|||++.+|||.|.||+|-++|
T Consensus 139 SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyD 218 (603)
T KOG0318|consen 139 SVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYD 218 (603)
T ss_pred ccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEc
Confidence 211111110 0 00111112233 3447899999999999999999999999999
Q ss_pred CCCCceeEEEe---CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 130 PRMKVKAGTLD---CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 130 ~Rs~~~i~~L~---~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-.++..++.|. +|...| ..|+|+||+++++| +| ++||||..+++
T Consensus 219 Gktge~vg~l~~~~aHkGsI-----------------falsWsPDs~~~~T~SaDkt~KIWdVs~~s 268 (603)
T KOG0318|consen 219 GKTGEKVGELEDSDAHKGSI-----------------FALSWSPDSTQFLTVSADKTIKIWDVSTNS 268 (603)
T ss_pred CCCccEEEEecCCCCccccE-----------------EEEEECCCCceEEEecCCceEEEEEeeccc
Confidence 99999999998 566665 88999999999996 79 99999999877
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-14 Score=133.74 Aligned_cols=141 Identities=16% Similarity=0.186 Sum_probs=110.3
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.+.|||.++.+|+...+.++ +.| +|...|..++|||-..-|+++.+.|+.+++||++.. -|+.-
T Consensus 121 ltsSWD~TiKLW~~~r~~Sv-------------~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~-gk~~~- 185 (311)
T KOG0277|consen 121 LTSSWDGTIKLWDPNRPNSV-------------QTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP-GKFMS- 185 (311)
T ss_pred EeeccCCceEeecCCCCcce-------------EeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC-CceeE-
Confidence 45599999999996555433 335 377889999999988888899999999999998753 22110
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.-++ ..|.||.||. ++.+|+||+.|+.|++||+|. +.++..|.+|.-.|
T Consensus 186 ---------i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AV----------------- 237 (311)
T KOG0277|consen 186 ---------IEAHN--SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAV----------------- 237 (311)
T ss_pred ---------EEecc--ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEE-----------------
Confidence 11111 4688999987 578999999999999999997 56789998887776
Q ss_pred eeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
.+|+|||...-|+ | .| +++|||...+.
T Consensus 238 Rkvk~Sph~~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 238 RKVKFSPHHASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred EEEecCcchhhHhhhccccceEEecccccch
Confidence 8999999876554 4 58 99999998655
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.1e-14 Score=133.78 Aligned_cols=137 Identities=15% Similarity=0.135 Sum_probs=112.4
Q ss_pred EEEeecCCceeeee-ec--cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 6 CYQTNWHKQAVTLV-II--GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~--~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.++.|.||+++.|+ +. .-|++|.+ ...+|.+.-+.-|..++.||+.|+++||||+++....
T Consensus 105 i~S~gtDk~v~~wD~~tG~~~rk~k~h---------------~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~- 168 (338)
T KOG0265|consen 105 ILSCGTDKTVRGWDAETGKRIRKHKGH---------------TSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAI- 168 (338)
T ss_pred EEEecCCceEEEEecccceeeehhccc---------------cceeeecCccccCCeEEEecCCCceEEEEeecccchh-
Confidence 68999999999999 43 33333333 4568888878889999999999999999999853110
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
..+ ... ..+.++.|+.++.-+.+|+-|+.|++||+|.+....++.+|.++|
T Consensus 169 --------~t~---~~k--yqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtI---------------- 219 (338)
T KOG0265|consen 169 --------KTF---ENK--YQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTI---------------- 219 (338)
T ss_pred --------hcc---ccc--eeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCce----------------
Confidence 000 000 358899999999999999999999999999999999999999988
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
+.|..+++|..++| +| ++++||.+-
T Consensus 220 -t~lsls~~gs~llsnsMd~tvrvwd~rp 247 (338)
T KOG0265|consen 220 -TGLSLSRYGSFLLSNSMDNTVRVWDVRP 247 (338)
T ss_pred -eeEEeccCCCccccccccceEEEEEecc
Confidence 78999999999996 89 999999974
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=130.28 Aligned_cols=135 Identities=21% Similarity=0.263 Sum_probs=111.1
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.|++-|+.+..|+ .... ..|.|+ |..-||+|+|.|+|. -++||+.|+++|+||++...
T Consensus 203 vSg~cD~~aklWD~R~~~--------------c~qtF~ghesDINsv~ffP~G~-afatGSDD~tcRlyDlRaD~----- 262 (343)
T KOG0286|consen 203 VSGGCDKSAKLWDVRSGQ--------------CVQTFEGHESDINSVRFFPSGD-AFATGSDDATCRLYDLRADQ----- 262 (343)
T ss_pred EecccccceeeeeccCcc--------------eeEeecccccccceEEEccCCC-eeeecCCCceeEEEeecCCc-----
Confidence 4778899999999 3322 568886 778899999999996 46899999999999998521
Q ss_pred eccCceEEEEEeec-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 85 CFDSEVVTFEILSD-DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 85 ~~d~e~v~f~~LS~-D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
++ .+.++ .-..+|++|+||..|.||.+|..|.++.+||.-.+++++.|.+|.+-|
T Consensus 263 ----~~---a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRv----------------- 318 (343)
T KOG0286|consen 263 ----EL---AVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRV----------------- 318 (343)
T ss_pred ----EE---eeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCee-----------------
Confidence 11 11111 111689999999999999999999999999999999999999999887
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
..|..+|||.-|.| -| ++|||.
T Consensus 319 Scl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 319 SCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EEEEECCCCcEEEecchhHheeecC
Confidence 77999999998887 47 999994
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=125.41 Aligned_cols=155 Identities=12% Similarity=0.108 Sum_probs=116.3
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
..-|++|-|+++.-|+ .+. .+-.-|+|+..|++|...|+...|+ +|+.++.|+|||+.+.+...
T Consensus 96 rWMyTgseDgt~kIWdlR~~--------------~~qR~~~~~spVn~vvlhpnQteLi-s~dqsg~irvWDl~~~~c~~ 160 (311)
T KOG0315|consen 96 RWMYTGSEDGTVKIWDLRSL--------------SCQRNYQHNSPVNTVVLHPNQTELI-SGDQSGNIRVWDLGENSCTH 160 (311)
T ss_pred eEEEecCCCceEEEEeccCc--------------ccchhccCCCCcceEEecCCcceEE-eecCCCcEEEEEccCCcccc
Confidence 3569999999999998 441 2334578899999999999887775 67889999999998753221
Q ss_pred eeecc-CceEEEEEeecCCC-----------------------------------CCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 83 ERCFD-SEVVTFEILSDDYS-----------------------------------SELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 83 ~r~~d-~e~v~f~~LS~D~s-----------------------------------~~In~i~~np~~~llasGs~DGtV~ 126 (358)
+--.+ ...+......+|.+ +-|..|-+||++.+||++|.|.+|+
T Consensus 161 ~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~ 240 (311)
T KOG0315|consen 161 ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVK 240 (311)
T ss_pred ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEE
Confidence 11111 01122222233333 6789999999999999999999999
Q ss_pred EEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 127 AWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||....- +.-.+|.+|..-+ -..+||.||++|++ .| ++|+||+..|+
T Consensus 241 iwn~~~~~kle~~l~gh~rWv-----------------Wdc~FS~dg~YlvTassd~~~rlW~~~~~k 291 (311)
T KOG0315|consen 241 IWNTDDFFKLELVLTGHQRWV-----------------WDCAFSADGEYLVTASSDHTARLWDLSAGK 291 (311)
T ss_pred EEecCCceeeEEEeecCCceE-----------------EeeeeccCccEEEecCCCCceeecccccCc
Confidence 9998776 3345677776544 66899999999997 57 99999999998
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1e-14 Score=139.06 Aligned_cols=153 Identities=10% Similarity=0.133 Sum_probs=125.6
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.|.-++|-|+-+-.|+-..+ +|++|..|+-.=... -|..+|.|+.||.|.+.| |||+.||+|+||.+.+.. |.
T Consensus 226 qyLvsgSvDGFiEVWny~~G-KlrKDLkYQAqd~fM---Mmd~aVlci~FSRDsEMl-AsGsqDGkIKvWri~tG~--Cl 298 (508)
T KOG0275|consen 226 QYLVSGSVDGFIEVWNYTTG-KLRKDLKYQAQDNFM---MMDDAVLCISFSRDSEML-ASGSQDGKIKVWRIETGQ--CL 298 (508)
T ss_pred ceEeeccccceeeeehhccc-hhhhhhhhhhhccee---ecccceEEEeecccHHHh-hccCcCCcEEEEEEecch--HH
Confidence 58889999999999993222 267777775442222 367899999999999965 899999999999998753 23
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
|..|. .|+.+|.|+.|+.++..+.++|.|.+|++--+.+|+++..+.+|.+-+
T Consensus 299 RrFdr----------AHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyv----------------- 351 (508)
T KOG0275|consen 299 RRFDR----------AHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYV----------------- 351 (508)
T ss_pred HHhhh----------hhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccc-----------------
Confidence 33321 123689999999999999999999999999999999999999998877
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+...|.++|..|+| +| +||||+.++++
T Consensus 352 n~a~ft~dG~~iisaSsDgtvkvW~~Ktte 381 (508)
T KOG0275|consen 352 NEATFTDDGHHIISASSDGTVKVWHGKTTE 381 (508)
T ss_pred cceEEcCCCCeEEEecCCccEEEecCcchh
Confidence 77899999999997 58 99999999988
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.4e-13 Score=125.44 Aligned_cols=164 Identities=14% Similarity=0.142 Sum_probs=121.6
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe--eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF--EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf--e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
-.++.|.||+++-|.-...++ ..+..-+ .|.-+|++|+|||.|+|| |+|++|.++-||.=.....++
T Consensus 29 ilAscg~Dk~vriw~~~~~~s----------~~ck~vld~~hkrsVRsvAwsp~g~~L-a~aSFD~t~~Iw~k~~~efec 97 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDS----------WTCKTVLDDGHKRSVRSVAWSPHGRYL-ASASFDATVVIWKKEDGEFEC 97 (312)
T ss_pred EEEeecCCceEEEEecCCCCc----------EEEEEeccccchheeeeeeecCCCcEE-EEeeccceEEEeecCCCceeE
Confidence 357788888888887222332 3344333 366789999999999976 789999999999865433221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC---ceeEEEeCCCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK---VKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~---~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
... | .++...|.|++||++|++|||+|.|..|=||.+... .++++|..|.+.+
T Consensus 98 v~~----------l-EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDV------------- 153 (312)
T KOG0645|consen 98 VAT----------L-EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDV------------- 153 (312)
T ss_pred Eee----------e-eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccc-------------
Confidence 111 1 233368999999999999999999999999998754 4688999998877
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcEE----ecCCC--CCccccccch
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKTY----NLGPA--PKWCGFLDNL 207 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~y----~lgpa--p~Wcsfldnl 207 (358)
+.+.|||...+|+| .| +||+|+...+..+ .|+-. ..||.-.++.
T Consensus 154 ----K~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~ 206 (312)
T KOG0645|consen 154 ----KHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI 206 (312)
T ss_pred ----cEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC
Confidence 89999999999997 58 9999998854422 44433 5587755554
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.1e-13 Score=143.30 Aligned_cols=133 Identities=20% Similarity=0.243 Sum_probs=100.0
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|...++|+++|||||+| |||+.|+.|||||....- | .++| .+|+++|.++.|+..++.+.+.|-|
T Consensus 348 gH~~~i~~l~YSpDgq~i-aTG~eDgKVKvWn~~Sgf--C-------~vTF----teHts~Vt~v~f~~~g~~llssSLD 413 (893)
T KOG0291|consen 348 GHSDRITSLAYSPDGQLI-ATGAEDGKVKVWNTQSGF--C-------FVTF----TEHTSGVTAVQFTARGNVLLSSSLD 413 (893)
T ss_pred ccccceeeEEECCCCcEE-EeccCCCcEEEEeccCce--E-------EEEe----ccCCCceEEEEEEecCCEEEEeecC
Confidence 466789999999999976 789999999999987431 0 1112 3466899999999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCC--ccc------------------cc------cCCCc-eeeEEcCCCCEE
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTE--EKE------------------GK------ASSDE-SSEEEEEEEEEE 175 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~--gl~------------------Gt------Rs~~P-~sI~fs~d~~~l 175 (358)
|+|+.||+.....-.++.++...--++..+| |.. |. .+..| .+|+|+|.++.|
T Consensus 414 GtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~L 493 (893)
T KOG0291|consen 414 GTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLL 493 (893)
T ss_pred CeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeE
Confidence 9999999988888888876543221221121 211 22 34456 889999999999
Q ss_pred EE--ec-ceEEEECCCC
Q psy2085 176 ES--SD-DDQAWTKEIK 189 (358)
Q Consensus 176 lS--aD-~IKIWD~~tG 189 (358)
+| -| ||||||+-..
T Consensus 494 aS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 494 ASGSWDKTVRIWDIFSS 510 (893)
T ss_pred EeccccceEEEEEeecc
Confidence 97 48 9999999543
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=135.58 Aligned_cols=169 Identities=18% Similarity=0.198 Sum_probs=118.0
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eee
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FER 84 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r 84 (358)
+++.++.+..|.... .|+..|. |.++|.+++|+.+|.||++ |+-|+++-+||......+ |+.
T Consensus 252 tG~~~G~~riw~~~G--------------~l~~tl~~HkgPI~slKWnk~G~yilS-~~vD~ttilwd~~~g~~~q~f~~ 316 (524)
T KOG0273|consen 252 TGSEDGEARIWNKDG--------------NLISTLGQHKGPIFSLKWNKKGTYILS-GGVDGTTILWDAHTGTVKQQFEF 316 (524)
T ss_pred EeecCcEEEEEecCc--------------hhhhhhhccCCceEEEEEcCCCCEEEe-ccCCccEEEEeccCceEEEeeee
Confidence 455666677776211 2344443 6689999999999999965 567899999999665444 332
Q ss_pred eccCceE--------EEEEeecC-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 85 CFDSEVV--------TFEILSDD-------------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 85 ~~d~e~v--------~f~~LS~D-------------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
|- ++.+ .|.+.++| |++.||++.|||.+.||+|+|+|||++||.+....++.
T Consensus 317 ~s-~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~ 395 (524)
T KOG0273|consen 317 HS-APALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVH 395 (524)
T ss_pred cc-CCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchh
Confidence 21 1112 23333333 33899999999999999999999999999988888888
Q ss_pred EEeCCCCcc-ccccCCCc---------cc-------cc----------------cCCCc-eeeEEcCCCCEEEE--ec-c
Q psy2085 138 TLDCAFNCI-SNERDTEE---------KE-------GK----------------ASSDE-SSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 138 ~L~~~~~~v-~~~~~i~g---------l~-------Gt----------------Rs~~P-~sI~fs~d~~~llS--aD-~ 180 (358)
.|.+|...| +...+++| +. +| ++..| .+|+|+|+|.+|+| .| .
T Consensus 396 ~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~ 475 (524)
T KOG0273|consen 396 DLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGC 475 (524)
T ss_pred hhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCe
Confidence 888877433 11111111 00 11 45556 99999999999998 46 9
Q ss_pred eEEEECCCCcEE
Q psy2085 181 DQAWTKEIKKTY 192 (358)
Q Consensus 181 IKIWD~~tG~~y 192 (358)
|.||+.++|+.|
T Consensus 476 V~iws~~~~~l~ 487 (524)
T KOG0273|consen 476 VHIWSTKTGKLV 487 (524)
T ss_pred eEeccccchhee
Confidence 999999999844
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.1e-14 Score=139.79 Aligned_cols=125 Identities=18% Similarity=0.258 Sum_probs=100.4
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
|+-|-+-..|...+..+.|+|++..++++|++|..+++||+.+.. + ...+ .++++.|.|.+|+|.+.
T Consensus 100 r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~----------v-~~~l--~~htDYVR~g~~~~~~~ 166 (487)
T KOG0310|consen 100 RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAY----------V-QAEL--SGHTDYVRCGDISPAND 166 (487)
T ss_pred HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcE----------E-EEEe--cCCcceeEeeccccCCC
Confidence 333334445667899999999999999999999999999998632 1 1111 23446799999999754
Q ss_pred -EEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECCCCc
Q psy2085 115 -LICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKEIKK 190 (358)
Q Consensus 115 -llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~tG~ 190 (358)
+++|||.||+|++||+|+. ..+.+|++ ..+| -++.|-|.|..|+||. .|||||+.+|.
T Consensus 167 hivvtGsYDg~vrl~DtR~~~~~v~elnh-g~pV-----------------e~vl~lpsgs~iasAgGn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 167 HIVVTGSYDGKVRLWDTRSLTSRVVELNH-GCPV-----------------ESVLALPSGSLIASAGGNSVKVWDLTTGG 228 (487)
T ss_pred eEEEecCCCceEEEEEeccCCceeEEecC-CCce-----------------eeEEEcCCCCEEEEcCCCeEEEEEecCCc
Confidence 9999999999999999998 77888874 4455 6799999999999976 99999999776
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-13 Score=147.93 Aligned_cols=134 Identities=18% Similarity=0.222 Sum_probs=106.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeee---eeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFE---RCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~---r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
.|-+.-.|.+.|+||+|||||+|| |+|++|..|-||+-.+.. --|- .+.+.|.......--.|+..|..++|+|
T Consensus 61 ~l~~m~~h~~sv~CVR~S~dG~~l-AsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp 139 (942)
T KOG0973|consen 61 HLCTMDDHDGSVNCVRFSPDGSYL-ASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP 139 (942)
T ss_pred hheeeccccCceeEEEECCCCCeE-eeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence 345555789999999999999997 789999999999987411 1121 1222333333222233557899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKEI 188 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~t 188 (358)
++.+||++|-|++|-+|+.++..++.+|.+|.+.| +.+.|.|-|++++| + | +||||+..+
T Consensus 140 ~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~V-----------------KGvs~DP~Gky~ASqsdDrtikvwrt~d 202 (942)
T KOG0973|consen 140 DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLV-----------------KGVSWDPIGKYFASQSDDRTLKVWRTSD 202 (942)
T ss_pred CccEEEEecccceEEEEccccceeeeeeecccccc-----------------cceEECCccCeeeeecCCceEEEEEccc
Confidence 99999999999999999999999999999999887 88999999999998 4 4 999999654
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=6e-14 Score=133.31 Aligned_cols=142 Identities=15% Similarity=0.236 Sum_probs=114.8
Q ss_pred EEEeecCCceeeee---eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 6 CYQTNWHKQAVTLV---IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~---~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
..|+|-|+++...+ .+.||.+|--.+ -..|.++.|.|.|.||+ .|+.-|.+|+||+++...
T Consensus 187 LiS~srD~tvKlFDfsK~saKrA~K~~qd-------------~~~vrsiSfHPsGefll-vgTdHp~~rlYdv~T~Qc-- 250 (430)
T KOG0640|consen 187 LISGSRDNTVKLFDFSKTSAKRAFKVFQD-------------TEPVRSISFHPSGEFLL-VGTDHPTLRLYDVNTYQC-- 250 (430)
T ss_pred EEeccCCCeEEEEecccHHHHHHHHHhhc-------------cceeeeEeecCCCceEE-EecCCCceeEEeccceeE--
Confidence 46788899999888 577776664332 24689999999999985 578899999999987421
Q ss_pred eeeccCceEEEEEe--ecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC-CC-ccccccCCCccccc
Q psy2085 83 ERCFDSEVVTFEIL--SDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA-FN-CISNERDTEEKEGK 158 (358)
Q Consensus 83 ~r~~d~e~v~f~~L--S~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~-~~-~v~~~~~i~gl~Gt 158 (358)
|... ++.+++.|++|.+|+.+.+.+|||-||.|++||--+++|+.++..+ .. .|
T Consensus 251 ----------fvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsev------------ 308 (430)
T KOG0640|consen 251 ----------FVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEV------------ 308 (430)
T ss_pred ----------eeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCcee------------
Confidence 1111 2345689999999999999999999999999999999999988643 22 22
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+..|..+|++|+| .| +||+|.+.+|+
T Consensus 309 -----cSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R 338 (430)
T KOG0640|consen 309 -----CSAVFTKNGKYILSSGKDSTVKLWEISTGR 338 (430)
T ss_pred -----eeEEEccCCeEEeecCCcceeeeeeecCCc
Confidence 67899999999998 58 99999999998
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=127.68 Aligned_cols=109 Identities=16% Similarity=0.216 Sum_probs=82.3
Q ss_pred EeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeee
Q psy2085 8 QTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~ 85 (358)
-+|||.+++-|. ...++..-+ ...++++.+-+++||.||..++ +|+-|+++++|||...... +.-|
T Consensus 45 A~SWD~tVR~wevq~~g~~~~k-----------a~~~~~~PvL~v~WsddgskVf-~g~~Dk~~k~wDL~S~Q~~~v~~H 112 (347)
T KOG0647|consen 45 AGSWDGTVRIWEVQNSGQLVPK-----------AQQSHDGPVLDVCWSDDGSKVF-SGGCDKQAKLWDLASGQVSQVAAH 112 (347)
T ss_pred ecccCCceEEEEEecCCcccch-----------hhhccCCCeEEEEEccCCceEE-eeccCCceEEEEccCCCeeeeeec
Confidence 689999999999 544432221 1235788999999999998775 4556889999999865322 1111
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
.++|.+|.|-+. .++|+|||.|.||++||+|+.+++.++..+.
T Consensus 113 ---------------d~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPe 157 (347)
T KOG0647|consen 113 ---------------DAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPE 157 (347)
T ss_pred ---------------ccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccc
Confidence 167888888654 4599999999999999999999998887654
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.8e-14 Score=146.24 Aligned_cols=119 Identities=14% Similarity=0.217 Sum_probs=101.3
Q ss_pred EEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
||..| +|.+.|..|.|.|++- |+++|++|-.|+||+..+....| ..+.. -+.|.++.|++....|
T Consensus 43 li~rFdeHdGpVRgv~FH~~qp-lFVSGGDDykIkVWnYk~rrclf-----------tL~GH--lDYVRt~~FHheyPWI 108 (1202)
T KOG0292|consen 43 LIDRFDEHDGPVRGVDFHPTQP-LFVSGGDDYKIKVWNYKTRRCLF-----------TLLGH--LDYVRTVFFHHEYPWI 108 (1202)
T ss_pred HHhhhhccCCccceeeecCCCC-eEEecCCccEEEEEecccceehh-----------hhccc--cceeEEeeccCCCceE
Confidence 77778 4899999999999997 56788899999999987632211 11111 1469999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.|+|+|.||+||+..+++++++|.+|.+-+ .+.+|||....|+| .| +|+|||+.
T Consensus 109 lSASDDQTIrIWNwqsr~~iavltGHnHYV-----------------McAqFhptEDlIVSaSLDQTVRVWDis 165 (1202)
T KOG0292|consen 109 LSASDDQTIRIWNWQSRKCIAVLTGHNHYV-----------------MCAQFHPTEDLIVSASLDQTVRVWDIS 165 (1202)
T ss_pred EEccCCCeEEEEeccCCceEEEEecCceEE-----------------EeeccCCccceEEEecccceEEEEeec
Confidence 999999999999999999999999999987 77899999999997 48 99999995
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.9e-14 Score=135.31 Aligned_cols=116 Identities=12% Similarity=0.221 Sum_probs=100.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|.+.|.||++-|-.+|+ +||+.|++|+|||+.+..+|..-. ++-..|..|++|+.|.++.++++|+
T Consensus 150 HlgWVr~vavdP~n~wf-~tgs~DrtikIwDlatg~Lkltlt-------------Ghi~~vr~vavS~rHpYlFs~gedk 215 (460)
T KOG0285|consen 150 HLGWVRSVAVDPGNEWF-ATGSADRTIKIWDLATGQLKLTLT-------------GHIETVRGVAVSKRHPYLFSAGEDK 215 (460)
T ss_pred ccceEEEEeeCCCceeE-EecCCCceeEEEEcccCeEEEeec-------------chhheeeeeeecccCceEEEecCCC
Confidence 66889999999998886 789999999999999877664311 1115688999999999999999999
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.|+|||+..++.|....+|.+.+ .+|..||.-+.|+| .| ++||||+++..
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V-----------------~~L~lhPTldvl~t~grDst~RvWDiRtr~ 268 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGV-----------------YCLDLHPTLDVLVTGGRDSTIRVWDIRTRA 268 (460)
T ss_pred eeEEEechhhhhHHHhcccccee-----------------EEEeccccceeEEecCCcceEEEeeecccc
Confidence 99999999999999999998887 88999999999997 57 99999999865
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=142.61 Aligned_cols=153 Identities=12% Similarity=0.126 Sum_probs=116.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
..-++|-|+.+..|.-... -..-.-+-|.-.|...|.+|+++.-|.-++++++.|.+|++|++.....
T Consensus 379 llat~sKD~svilWr~~~~--------~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~---- 446 (775)
T KOG0319|consen 379 LLATGSKDKSVILWRLNNN--------CSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKE---- 446 (775)
T ss_pred EEEEecCCceEEEEEecCC--------cchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccc----
Confidence 4567888899999962000 0011112233458899999999999988899999999999999985110
Q ss_pred eccCceEEE----EEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 85 CFDSEVVTF----EILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 85 ~~d~e~v~f----~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
.+. ...+ .....| ..||||+++|+..||||||.|.++++|++.....+++|.+|...+
T Consensus 447 -~~~-~~~~~~~~t~~aHd--KdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGv-------------- 508 (775)
T KOG0319|consen 447 -TAF-PIVLTCRYTERAHD--KDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGV-------------- 508 (775)
T ss_pred -ccc-cceehhhHHHHhhc--ccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccce--------------
Confidence 001 1111 011122 679999999999999999999999999999888899999999887
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-++.|+|..+.|+| +| |||||.+.++.
T Consensus 509 ---w~V~Fs~~dq~laT~SgD~TvKIW~is~fS 538 (775)
T KOG0319|consen 509 ---WCVSFSKNDQLLATCSGDKTVKIWSISTFS 538 (775)
T ss_pred ---EEEEeccccceeEeccCCceEEEEEeccce
Confidence 78999999999986 68 99999999876
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.6e-14 Score=131.53 Aligned_cols=139 Identities=15% Similarity=0.195 Sum_probs=110.9
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeecc
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFD 87 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d 87 (358)
+.++|.++..|+...+ ..|+.|+|...|..|+||.|.++|+ ||+.+.-+||||++....
T Consensus 76 saaadftakvw~a~tg-------------delhsf~hkhivk~~af~~ds~~ll-tgg~ekllrvfdln~p~A------- 134 (334)
T KOG0278|consen 76 SAAADFTAKVWDAVTG-------------DELHSFEHKHIVKAVAFSQDSNYLL-TGGQEKLLRVFDLNRPKA------- 134 (334)
T ss_pred hhcccchhhhhhhhhh-------------hhhhhhhhhheeeeEEecccchhhh-ccchHHHhhhhhccCCCC-------
Confidence 4566667777764444 4578899999999999999999985 677788999999986432
Q ss_pred CceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 88 SEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 88 ~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
+...+ .+++++|..+-|.-..+.|.+.++|++|++||.|++..+.+|....+. +++.
T Consensus 135 -pp~E~----~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~V------------------tSlE 191 (334)
T KOG0278|consen 135 -PPKEI----SGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPV------------------TSLE 191 (334)
T ss_pred -Cchhh----cCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCC------------------ccee
Confidence 11111 233478999999887777777799999999999999999999875443 8899
Q ss_pred EcCCCCEEEEec--ceEEEECCCCc
Q psy2085 168 EEEEEEEEESSD--DDQAWTKEIKK 190 (358)
Q Consensus 168 fs~d~~~llSaD--~IKIWD~~tG~ 190 (358)
.|++|++|..++ .|++||.++-.
T Consensus 192 vs~dG~ilTia~gssV~Fwdaksf~ 216 (334)
T KOG0278|consen 192 VSQDGRILTIAYGSSVKFWDAKSFG 216 (334)
T ss_pred eccCCCEEEEecCceeEEecccccc
Confidence 999999988888 99999998754
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.1e-12 Score=122.78 Aligned_cols=150 Identities=16% Similarity=0.144 Sum_probs=122.1
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEE----ecCCeEEEEEcCCC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTG----IYKPRVRCYETDNL 78 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG----~~d~~IrvwDl~~l 78 (358)
.++.++|+|.++.+|+ +..| ++..+.++.+|..+.|+++|.+++++. +|.+.|.+||++..
T Consensus 65 ~~liTGSAD~t~kLWDv~tGk--------------~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~ 130 (327)
T KOG0643|consen 65 KHLITGSADQTAKLWDVETGK--------------QLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDD 130 (327)
T ss_pred ceeeeccccceeEEEEcCCCc--------------EEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCC
Confidence 5889999999999999 6665 677889999999999999999887764 46678999999865
Q ss_pred ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEeCCCCccccccCCCcccc
Q psy2085 79 SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK-AGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 79 slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~-i~~L~~~~~~v~~~~~i~gl~G 157 (358)
+- ..+++..-..+..++ +.|++.-|.|-+..|++|.+||.|..||.+++.. +.+...|.+.|
T Consensus 131 ~~----~~~s~ep~~kI~t~~--skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~I----------- 193 (327)
T KOG0643|consen 131 SS----DIDSEEPYLKIPTPD--SKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKI----------- 193 (327)
T ss_pred hh----hhcccCceEEecCCc--cceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhcccc-----------
Confidence 32 112222123455566 7899999999999999999999999999999854 55556677666
Q ss_pred ccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++|+|+++..++++ -| +.|+||..+-.
T Consensus 194 ------nd~q~s~d~T~FiT~s~Dttakl~D~~tl~ 223 (327)
T KOG0643|consen 194 ------NDLQFSRDRTYFITGSKDTTAKLVDVRTLE 223 (327)
T ss_pred ------ccccccCCcceEEecccCccceeeecccee
Confidence 88999999999996 57 99999999866
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.4e-13 Score=141.95 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=98.6
Q ss_pred cceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc----------------------------e-e-
Q psy2085 34 RRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS----------------------------M-K- 81 (358)
Q Consensus 34 ~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls----------------------------l-k- 81 (358)
.-+-.-|.+. |.++|.+++||+||+|| |||+-|+.||||.+.+-. . +
T Consensus 254 sal~~~Qe~~~ah~gaIw~mKFS~DGKyL-AsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~ 332 (712)
T KOG0283|consen 254 SALTVVQEISNAHKGAIWAMKFSHDGKYL-ASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKI 332 (712)
T ss_pred eeeEEeeccccccCCcEEEEEeCCCCcee-eecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccc
Confidence 3445556664 88999999999999998 677889999999987600 0 0
Q ss_pred ------eeeeccCceEEE----EEeec-------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 82 ------FERCFDSEVVTF----EILSD-------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 82 ------~~r~~d~e~v~f----~~LS~-------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.+...+.+.+ -.+++ +|++.|..|+|+.++ +|.++|.|.||++|++....|++++. |.+
T Consensus 333 ~~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~~CL~~F~-Hnd 410 (712)
T KOG0283|consen 333 SSRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRKECLKVFS-HND 410 (712)
T ss_pred cccccccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCCcceeeEEe-cCC
Confidence 000111111000 00111 233789999998765 77778999999999999999999996 556
Q ss_pred ccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 145 CISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 145 ~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-| ++|+|+| |.++++| .| .|+||++...+
T Consensus 411 fV-----------------TcVaFnPvDDryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 411 FV-----------------TCVAFNPVDDRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred ee-----------------EEEEecccCCCcEeecccccceEEeecCcCe
Confidence 56 7899999 5678887 69 99999998665
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=3e-13 Score=134.29 Aligned_cols=149 Identities=19% Similarity=0.294 Sum_probs=116.4
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--e
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--F 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~ 82 (358)
-+|+|.|+.+.+|+ |..+ +++.|.-....+||+|.||++.++.+|+.++.|+.||++...+- +
T Consensus 273 fLS~sfD~~lKlwDtETG~--------------~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY 338 (503)
T KOG0282|consen 273 FLSASFDRFLKLWDTETGQ--------------VLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY 338 (503)
T ss_pred eeeeecceeeeeeccccce--------------EEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH
Confidence 36899999999999 6554 77888877889999999999888888999999999999864321 2
Q ss_pred eeeccC--------ceEEEEEeecCCC-----------------------------------------------------
Q psy2085 83 ERCFDS--------EVVTFEILSDDYS----------------------------------------------------- 101 (358)
Q Consensus 83 ~r~~d~--------e~v~f~~LS~D~s----------------------------------------------------- 101 (358)
.+|+.+ +.-.|..-|+|.+
T Consensus 339 d~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~ 418 (503)
T KOG0282|consen 339 DRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPF 418 (503)
T ss_pred HhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccc
Confidence 233321 1112333334433
Q ss_pred --------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 102 --------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 102 --------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
+.-..|.|||++.+|++|+.||.|.+||-++-+.+..+.+|..++ ..+.
T Consensus 419 r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~c-----------------i~v~ 481 (503)
T KOG0282|consen 419 RLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPC-----------------IGVD 481 (503)
T ss_pred ccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcce-----------------EEEE
Confidence 556778999999999999999999999999999999999997776 7799
Q ss_pred EcCCCC-EEEEe--c-ceEEEE
Q psy2085 168 EEEEEE-EEESS--D-DDQAWT 185 (358)
Q Consensus 168 fs~d~~-~llSa--D-~IKIWD 185 (358)
|||... .|+|+ | .|||||
T Consensus 482 wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 482 WHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ecCCCcceeEecccCceeEecC
Confidence 999764 67775 5 999997
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2e-13 Score=136.60 Aligned_cols=157 Identities=18% Similarity=0.139 Sum_probs=107.6
Q ss_pred EEeecCCceeeee---eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 7 YQTNWHKQAVTLV---IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 7 ~~~~~~~~~~~~~---~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+-||++-++...+ -...+-.|.|.-+ +.+-..-.|-..++|.+|.|+.+-.+.|+++|+++||||+++..-.
T Consensus 230 Lvvsg~aqakl~DRdG~~~~e~~KGDQYI---~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q-- 304 (641)
T KOG0772|consen 230 LVVSGSAQAKLLDRDGFEIVEFSKGDQYI---RDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQ-- 304 (641)
T ss_pred EEEecCcceeEEccCCceeeeeeccchhh---hhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhh--
Confidence 3455566666666 1334444555532 2333444566789999999998877889999999999999863210
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEE-eCCCC--ccccccCCCccccc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK--AGTL-DCAFN--CISNERDTEEKEGK 158 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~--i~~L-~~~~~--~v~~~~~i~gl~Gt 158 (358)
-.++..... ....-.+.+|+|||++.+||+|..||.|.+||.++... ...+ +.|.. .|
T Consensus 305 ----~qVik~k~~-~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~I------------ 367 (641)
T KOG0772|consen 305 ----LQVIKTKPA-GGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDI------------ 367 (641)
T ss_pred ----eeEEeeccC-CCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCce------------
Confidence 011111000 01113589999999999999999999999999876542 2222 34443 33
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++|.||++|++|+| -| ++|+||++.-+
T Consensus 368 -----tsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 368 -----TSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred -----eEEEeccccchhhhccCCCceeeeeccccc
Confidence 88999999999998 58 99999998765
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.1e-11 Score=111.22 Aligned_cols=154 Identities=20% Similarity=0.258 Sum_probs=100.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.+.+.++.++.+..|.....+ .++.+ .+...+.++.|+|++++| ++|+.++.|++||+.+....
T Consensus 22 ~~l~~~~~~g~i~i~~~~~~~-------------~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~~~~i~i~~~~~~~~~~ 87 (289)
T cd00200 22 KLLATGSGDGTIKVWDLETGE-------------LLRTLKGHTGPVRDVAASADGTYL-ASGSSDKTIRLWDLETGECVR 87 (289)
T ss_pred CEEEEeecCcEEEEEEeeCCC-------------cEEEEecCCcceeEEEECCCCCEE-EEEcCCCeEEEEEcCcccceE
Confidence 467777888888888832221 22222 355678899999999877 45667999999999863211
Q ss_pred -eeeeccCceEEEEEeec----------C-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 82 -FERCFDSEVVTFEILSD----------D-------------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 82 -~~r~~d~e~v~f~~LS~----------D-------------------~s~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
+..+. ..+..+ .+++ + +...|.+++|+|++.++++|+.||.|.+||++
T Consensus 88 ~~~~~~-~~i~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~ 165 (289)
T cd00200 88 TLTGHT-SYVSSV-AFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR 165 (289)
T ss_pred EEeccC-CcEEEE-EEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEcc
Confidence 11111 111110 0011 1 11457777777777777777767777777777
Q ss_pred CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+++.+..+..+...+ .++.|+|++..|++ .| .|++||..+++
T Consensus 166 ~~~~~~~~~~~~~~i-----------------~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~ 210 (289)
T cd00200 166 TGKCVATLTGHTGEV-----------------NSVAFSPDGEKLLSSSSDGTIKLWDLSTGK 210 (289)
T ss_pred ccccceeEecCcccc-----------------ceEEECCCcCEEEEecCCCcEEEEECCCCc
Confidence 777766666555444 78999999977775 46 99999998876
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.8e-14 Score=135.28 Aligned_cols=122 Identities=16% Similarity=0.277 Sum_probs=98.1
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceE-EEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVV-TFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v-~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
...+.|.+|||||+|| ++|+-||-|.||+.-+..++ ..+....- .|.+. + ..|.|++|+.+..+||+|+.||
T Consensus 213 KSh~EcA~FSPDgqyL-vsgSvDGFiEVWny~~GKlr--KDLkYQAqd~fMMm-d---~aVlci~FSRDsEMlAsGsqDG 285 (508)
T KOG0275|consen 213 KSHVECARFSPDGQYL-VSGSVDGFIEVWNYTTGKLR--KDLKYQAQDNFMMM-D---DAVLCISFSRDSEMLASGSQDG 285 (508)
T ss_pred ccchhheeeCCCCceE-eeccccceeeeehhccchhh--hhhhhhhhcceeec-c---cceEEEeecccHHHhhccCcCC
Confidence 3567899999999998 68899999999998765432 11111111 12221 2 5899999999999999999999
Q ss_pred eEEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
.|++|-+++|.|+..++ .|...+ .++.||.|+..|+|+ | +++|.-+++|+
T Consensus 286 kIKvWri~tG~ClRrFdrAHtkGv-----------------t~l~FSrD~SqiLS~sfD~tvRiHGlKSGK 339 (508)
T KOG0275|consen 286 KIKVWRIETGQCLRRFDRAHTKGV-----------------TCLSFSRDNSQILSASFDQTVRIHGLKSGK 339 (508)
T ss_pred cEEEEEEecchHHHHhhhhhccCe-----------------eEEEEccCcchhhcccccceEEEeccccch
Confidence 99999999999999998 566665 789999999999974 7 99999999998
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.46 E-value=6.5e-13 Score=135.78 Aligned_cols=151 Identities=14% Similarity=0.150 Sum_probs=114.7
Q ss_pred EEEeecCCceeeee-ecc----CcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 6 CYQTNWHKQAVTLV-IIG----GRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~----~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
..|+|.|-++..|. +.. .+-++.+.+ -|.|++.-.....++|||+-|+.|.|||++.+..
T Consensus 88 lIS~SsDtTVK~W~~~~~~~~c~stir~H~D---------------YVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~ 152 (735)
T KOG0308|consen 88 LISASSDTTVKVWNAHKDNTFCMSTIRTHKD---------------YVKCLAYIAKNNELVASGGLDRKIFLWDINTGTA 152 (735)
T ss_pred eEEecCCceEEEeecccCcchhHhhhhcccc---------------hheeeeecccCceeEEecCCCccEEEEEccCcch
Confidence 46899999999999 322 234444444 4778887333345789999999999999996521
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
... ...+.+....+..+...+|.+++.|+.+.+|++||..+.+++||+|+++.+..|.+|...|
T Consensus 153 ~l~--~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNV-------------- 216 (735)
T KOG0308|consen 153 TLV--ASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNV-------------- 216 (735)
T ss_pred hhh--hhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccce--------------
Confidence 000 0012222333332333789999999999999999999999999999999999999999877
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.|-.++||+.++| +| +||+||+...+
T Consensus 217 ---r~ll~~dDGt~~ls~sSDgtIrlWdLgqQr 246 (735)
T KOG0308|consen 217 ---RVLLVNDDGTRLLSASSDGTIRLWDLGQQR 246 (735)
T ss_pred ---EEEEEcCCCCeEeecCCCceEEeeeccccc
Confidence 88999999999997 68 99999997555
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.3e-13 Score=126.40 Aligned_cols=124 Identities=13% Similarity=0.187 Sum_probs=95.6
Q ss_pred EEEEeeCC----CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 38 LIQDFEMP----GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 38 liqdfe~~----~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
+-+|||-+ ..|.+++|||....++++|++|++|||||++......-+.. -.+.++|.+++|+.++
T Consensus 16 ~~kd~ev~~pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~-----------~~~~~PvL~v~Wsddg 84 (347)
T KOG0647|consen 16 PNKDYEVPNPPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQ-----------QSHDGPVLDVCWSDDG 84 (347)
T ss_pred cccceecCCCcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhh-----------hccCCCeEEEEEccCC
Confidence 44566643 57999999997778888999999999999986311000000 0112789999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC--EEEE--ec-ceEEEECCC
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE--EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~--~llS--aD-~IKIWD~~t 188 (358)
..+++|+.||.+++||+.+++ +..+..|..++ +.+.|-+... .|+| -| +||.||.+.
T Consensus 85 skVf~g~~Dk~~k~wDL~S~Q-~~~v~~Hd~pv-----------------kt~~wv~~~~~~cl~TGSWDKTlKfWD~R~ 146 (347)
T KOG0647|consen 85 SKVFSGGCDKQAKLWDLASGQ-VSQVAAHDAPV-----------------KTCHWVPGMNYQCLVTGSWDKTLKFWDTRS 146 (347)
T ss_pred ceEEeeccCCceEEEEccCCC-eeeeeecccce-----------------eEEEEecCCCcceeEecccccceeecccCC
Confidence 999999999999999999994 56677787777 7888887655 6665 48 999999987
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
..
T Consensus 147 ~~ 148 (347)
T KOG0647|consen 147 SN 148 (347)
T ss_pred CC
Confidence 65
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-12 Score=127.47 Aligned_cols=139 Identities=16% Similarity=0.244 Sum_probs=108.9
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
-+||+|||-+++.|+ +..+- +-..--+.+.+||..+|..+. +++|+.++.|++||.++.+
T Consensus 273 v~yS~SwDHTIk~WDletg~~--------------~~~~~~~ksl~~i~~~~~~~L-l~~gssdr~irl~DPR~~~---- 333 (423)
T KOG0313|consen 273 VIYSVSWDHTIKVWDLETGGL--------------KSTLTTNKSLNCISYSPLSKL-LASGSSDRHIRLWDPRTGD---- 333 (423)
T ss_pred ceEeecccceEEEEEeecccc--------------eeeeecCcceeEeecccccce-eeecCCCCceeecCCCCCC----
Confidence 479999999999999 55442 112223457899999998874 5788889999999988643
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCC
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
..++.+.+++.. ..|.+|.|||.+. +|++|+.||++++||.|+-+ ++..|.+|.+-+
T Consensus 334 ----gs~v~~s~~gH~--nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKv--------------- 392 (423)
T KOG0313|consen 334 ----GSVVSQSLIGHK--NWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKV--------------- 392 (423)
T ss_pred ----CceeEEeeecch--hhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceE---------------
Confidence 334555555433 6899999999864 89999999999999999987 899999998877
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
.++.|+.. ..|+| +| +|+|...
T Consensus 393 --l~vdW~~~-~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 393 --LSVDWNEG-GLIVSGGADNKLRIFKG 417 (423)
T ss_pred --EEEeccCC-ceEEeccCcceEEEecc
Confidence 77889864 46776 78 9999754
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.3e-12 Score=112.50 Aligned_cols=130 Identities=20% Similarity=0.216 Sum_probs=87.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeec----------CCC-----------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSD----------DYS----------- 101 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~----------D~s----------- 101 (358)
.|+..|++++|+|+|++|+ +|+.++.|++||+.+.............+.....++ +..
T Consensus 7 ~h~~~i~~~~~~~~~~~l~-~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~ 85 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLA-TGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGEC 85 (289)
T ss_pred ccCCCEEEEEEcCCCCEEE-EeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccc
Confidence 4788999999999999874 566799999999976432111111111110011111 100
Q ss_pred --------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 102 --------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 102 --------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
..|.+++|+|++.++++|+.||.|.+||+++++.+..+..+...+ ..+.|+|++.
T Consensus 86 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~~ 148 (289)
T cd00200 86 VRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWV-----------------NSVAFSPDGT 148 (289)
T ss_pred eEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcE-----------------EEEEEcCcCC
Confidence 357777777777777777777777777777777666666555444 7899999988
Q ss_pred EEEE-e-c-ceEEEECCCCc
Q psy2085 174 EEES-S-D-DDQAWTKEIKK 190 (358)
Q Consensus 174 ~llS-a-D-~IKIWD~~tG~ 190 (358)
+|++ . | .|++||..+++
T Consensus 149 ~l~~~~~~~~i~i~d~~~~~ 168 (289)
T cd00200 149 FVASSSQDGTIKLWDLRTGK 168 (289)
T ss_pred EEEEEcCCCcEEEEEccccc
Confidence 8886 4 7 99999998776
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.3e-13 Score=131.86 Aligned_cols=124 Identities=22% Similarity=0.302 Sum_probs=98.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee---eeccCceEEEEE-------eecCCC---------------
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE---RCFDSEVVTFEI-------LSDDYS--------------- 101 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~---r~~d~e~v~f~~-------LS~D~s--------------- 101 (358)
.|+.|+|+|+|+.|+ ||++.|.+.+|+.... -|+ ..+|+.+-.... +|.|..
T Consensus 98 ~V~~v~WtPeGRRLl-tgs~SGEFtLWNg~~f--nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~ 174 (464)
T KOG0284|consen 98 PVNVVRWTPEGRRLL-TGSQSGEFTLWNGTSF--NFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI 174 (464)
T ss_pred ceeeEEEcCCCceeE-eecccccEEEecCcee--eHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH
Confidence 689999999999984 7889999999997532 222 223443333322 222211
Q ss_pred ------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 102 ------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 102 ------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
..|.+++|+|...-|+|+|+||+|+|||.+..+.-.+|.+|.-.+ +++.|||....|
T Consensus 175 ~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdV-----------------ksvdWHP~kgLi 237 (464)
T KOG0284|consen 175 IQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDV-----------------KSVDWHPTKGLI 237 (464)
T ss_pred hhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCc-----------------ceeccCCcccee
Confidence 679999999999999999999999999999888888888887665 899999999999
Q ss_pred EEe--c-ceEEEECCCCc
Q psy2085 176 ESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 176 lSa--D-~IKIWD~~tG~ 190 (358)
+|+ | .||+||.++|.
T Consensus 238 asgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 238 ASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred EEccCCceeEeecCCCcc
Confidence 983 5 99999999998
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=9.3e-13 Score=134.19 Aligned_cols=122 Identities=19% Similarity=0.227 Sum_probs=103.6
Q ss_pred eeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC---ceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 36 IELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL---SMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 36 Ieliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l---slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
.|-+.+|+ |+.-++||+++|.--|++ |+++|-+||+||+... .+.|+.|. +.|.+|+|||
T Consensus 87 ~ekV~~FeAH~DyIR~iavHPt~P~vL-tsSDDm~iKlW~we~~wa~~qtfeGH~---------------HyVMqv~fnP 150 (794)
T KOG0276|consen 87 GEKVKTFEAHSDYIRSIAVHPTLPYVL-TSSDDMTIKLWDWENEWACEQTFEGHE---------------HYVMQVAFNP 150 (794)
T ss_pred ceeeEEeeccccceeeeeecCCCCeEE-ecCCccEEEEeeccCceeeeeEEcCcc---------------eEEEEEEecC
Confidence 47788998 899999999999999986 5678999999999863 33344443 5689999999
Q ss_pred C-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCC--CEEEE-ec--ceEEEE
Q psy2085 112 V-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEE--EEEES-SD--DDQAWT 185 (358)
Q Consensus 112 ~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~--~~llS-aD--~IKIWD 185 (358)
. .+.+||||-|+||++|.+.+..+..+|++|...+ ++|.|-+-| .+|+| +| +|||||
T Consensus 151 kD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV-----------------N~Vdyy~~gdkpylIsgaDD~tiKvWD 213 (794)
T KOG0276|consen 151 KDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV-----------------NCVDYYTGGDKPYLISGADDLTIKVWD 213 (794)
T ss_pred CCccceeeeeccccEEEEEcCCCCCceeeeccccCc-----------------ceEEeccCCCcceEEecCCCceEEEee
Confidence 5 6799999999999999999999999999998887 889988754 58998 66 999999
Q ss_pred CCCCc
Q psy2085 186 KEIKK 190 (358)
Q Consensus 186 ~~tG~ 190 (358)
.+|..
T Consensus 214 yQtk~ 218 (794)
T KOG0276|consen 214 YQTKS 218 (794)
T ss_pred cchHH
Confidence 98755
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=121.77 Aligned_cols=157 Identities=17% Similarity=0.238 Sum_probs=118.6
Q ss_pred cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC
Q psy2085 22 GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS 101 (358)
Q Consensus 22 ~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s 101 (358)
.+|.+--++.-..+|...+.|+-..+...|+||+....++.+++.||+++|||+...+- ..+... .|.
T Consensus 37 ~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~-Pi~~~k-----------EH~ 104 (311)
T KOG0277|consen 37 NGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSK-PIHKFK-----------EHK 104 (311)
T ss_pred CceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCc-chhHHH-----------hhh
Confidence 34444455556688999999999999999999999888888888899999999754321 111110 111
Q ss_pred CCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--
Q psy2085 102 SELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES-- 177 (358)
Q Consensus 102 ~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS-- 177 (358)
..|.+|+||+. ...+.++|.||||++||+.-++.+.++.+|.+.| .+.+|||... .++|
T Consensus 105 ~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~I-----------------y~a~~sp~~~nlfas~S 167 (311)
T KOG0277|consen 105 REVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCI-----------------YQAAFSPHIPNLFASAS 167 (311)
T ss_pred hheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEE-----------------EEEecCCCCCCeEEEcc
Confidence 56889999996 5578888999999999999999999999999887 8899999654 5555
Q ss_pred ec-ceEEEECCC-CcEEecCCCC-------Cccccccchh
Q psy2085 178 SD-DDQAWTKEI-KKTYNLGPAP-------KWCGFLDNLT 208 (358)
Q Consensus 178 aD-~IKIWD~~t-G~~y~lgpap-------~Wcsfldnlt 208 (358)
.| +++|||++. |+.-++ |++ .||-|-+|++
T Consensus 168 gd~~l~lwdvr~~gk~~~i-~ah~~Eil~cdw~ky~~~vl 206 (311)
T KOG0277|consen 168 GDGTLRLWDVRSPGKFMSI-EAHNSEILCCDWSKYNHNVL 206 (311)
T ss_pred CCceEEEEEecCCCceeEE-EeccceeEeecccccCCcEE
Confidence 68 999999976 442122 333 2888887775
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.5e-12 Score=123.19 Aligned_cols=153 Identities=16% Similarity=0.186 Sum_probs=114.8
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
+.|-|+++..|+-+.. +..-+|.||+.|++-++||- .+-|+|+|+.+++|++-|+...+...
T Consensus 119 ssSFDhtlKVWDtnTl-------------Q~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH--- 182 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTL-------------QEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSH--- 182 (397)
T ss_pred cccccceEEEeecccc-------------eeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCccee---
Confidence 4577888888884332 45678999999999999994 35688999999999999998765321
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccC-CCccccccCCC
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERD-TEEKEGKASSD 162 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~-i~gl~GtRs~~ 162 (358)
+| .+|.++|.+|.|+|... .|||||.||.|++||+|.. .|..+|+.|+..-..... ... -..+
T Consensus 183 ---------~L-sGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~a----h~gk 248 (397)
T KOG4283|consen 183 ---------TL-SGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTA----HYGK 248 (397)
T ss_pred ---------ee-ccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccc----ccce
Confidence 12 23447899999999876 7999999999999999976 678899887632100000 000 0000
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-+.++|+.++.++++ .| .+++|+..+|+
T Consensus 249 vngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 249 VNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred eeeeeecccchhhhhccCccceEEeecccCc
Confidence 178999999999987 67 99999999998
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-11 Score=133.62 Aligned_cols=155 Identities=10% Similarity=0.069 Sum_probs=96.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..+++.|+++..|+-... +++..+ .|.+.|++++|+| +|.+| +||+.|++|+|||+.+....
T Consensus 546 ~~las~~~Dg~v~lWd~~~~-------------~~~~~~~~H~~~V~~l~~~p~~~~~L-~Sgs~Dg~v~iWd~~~~~~~ 611 (793)
T PLN00181 546 SQVASSNFEGVVQVWDVARS-------------QLVTEMKEHEKRVWSIDYSSADPTLL-ASGSDDGSVKLWSINQGVSI 611 (793)
T ss_pred CEEEEEeCCCeEEEEECCCC-------------eEEEEecCCCCCEEEEEEcCCCCCEE-EEEcCCCEEEEEECCCCcEE
Confidence 36678888999999983221 234444 4788999999997 67765 67888999999999864321
Q ss_pred eeeeccCceEEEEE----------eec--------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 82 FERCFDSEVVTFEI----------LSD--------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 82 ~~r~~d~e~v~f~~----------LS~--------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
........+....+ -+. .+...|+++.|+ ++..|++|+.||+|++||++
T Consensus 612 ~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~ 690 (793)
T PLN00181 612 GTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLS 690 (793)
T ss_pred EEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCC
Confidence 11000011100000 000 111456666664 44566666666666666665
Q ss_pred CC------ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 MK------VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s~------~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+ .++.++.+|...+ ..+.|+|++.+|+| .| .|+||+...+.
T Consensus 691 ~~~~~~~~~~l~~~~gh~~~i-----------------~~v~~s~~~~~lasgs~D~~v~iw~~~~~~ 741 (793)
T PLN00181 691 MSISGINETPLHSFMGHTNVK-----------------NFVGLSVSDGYIATGSETNEVFVYHKAFPM 741 (793)
T ss_pred CCccccCCcceEEEcCCCCCe-----------------eEEEEcCCCCEEEEEeCCCEEEEEECCCCC
Confidence 32 3445555554433 67999999999997 46 99999987653
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-12 Score=132.01 Aligned_cols=164 Identities=17% Similarity=0.152 Sum_probs=119.2
Q ss_pred ceEEEEeecCCceeeee-eccCcccCCCccccc-ceeEE--EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 3 VEYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRR-RIELI--QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~-rIeli--qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
-+|+.++|+|+++.-|. .... + -+..++ ++.|. ..++++..|.||++||||+|| |.|--|.+|+||-+.++
T Consensus 466 ~~g~vT~saDktVkfWdf~l~~-~---~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~L-aVsLLdnTVkVyflDtl 540 (888)
T KOG0306|consen 466 NKGFVTGSADKTVKFWDFKLVV-S---VPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLL-AVSLLDNTVKVYFLDTL 540 (888)
T ss_pred CCceEEecCCcEEEEEeEEEEe-c---cCcccceeeeeccceEEeccccEEEEEEcCCCcEE-EEEeccCeEEEEEecce
Confidence 47899999999999999 2111 1 111222 24444 356889999999999999988 45677899999999976
Q ss_pred ceeeeeeccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEe
Q psy2085 79 SMKFERCFDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGTIEGKVEAWD 129 (358)
Q Consensus 79 slk~~r~~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs~DGtV~iWD 129 (358)
.....--.+.-+|.+.-+|+|.. +.|.+|.|-|...++.|+|-||.|+-||
T Consensus 541 KFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWD 620 (888)
T KOG0306|consen 541 KFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWD 620 (888)
T ss_pred eeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeec
Confidence 44322111223333334444433 6788888888877888888888888888
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
-..-.++.+|++|...+ .+++.+|+|.+++| .| +|++|....
T Consensus 621 g~kFe~iq~L~~H~~ev-----------------~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 621 GEKFEEIQKLDGHHSEV-----------------WCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred hhhhhhheeeccchhee-----------------eeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 88888888888887766 78999999999997 47 999998754
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.2e-11 Score=115.98 Aligned_cols=145 Identities=16% Similarity=0.171 Sum_probs=114.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..++|-|-+++.|... + .--|++..+| |+..|.||+||++|.|| ||++-|..|=||++.+..
T Consensus 74 ~~La~aSFD~t~~Iw~k~-------~----~efecv~~lEGHEnEVK~Vaws~sG~~L-ATCSRDKSVWiWe~dedd--- 138 (312)
T KOG0645|consen 74 RYLASASFDATVVIWKKE-------D----GEFECVATLEGHENEVKCVAWSASGNYL-ATCSRDKSVWIWEIDEDD--- 138 (312)
T ss_pred cEEEEeeccceEEEeecC-------C----CceeEEeeeeccccceeEEEEcCCCCEE-EEeeCCCeEEEEEecCCC---
Confidence 478888889898888721 2 2347788887 78899999999999987 788899999999987421
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC---CceeEEEeCCCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM---KVKAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs---~~~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
| .++...-.+|+..|..|.|+|.-.||+++|.|.||++|+-.. =.++++|++|.+.+
T Consensus 139 ------E-fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TV------------- 198 (312)
T KOG0645|consen 139 ------E-FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTV------------- 198 (312)
T ss_pred ------c-EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceE-------------
Confidence 1 111111245667899999999999999999999999997652 25789999988766
Q ss_pred CCCceeeEEcCCCCEEEEe-c--ceEEEECC
Q psy2085 160 SSDESSEEEEEEEEEEESS-D--DDQAWTKE 187 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llSa-D--~IKIWD~~ 187 (358)
-++.|++.|..|+|+ | +|+||-..
T Consensus 199 ----W~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 199 ----WSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred ----EEEEecCCCceEEEecCCcceEeeeec
Confidence 789999999999985 3 99999854
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-12 Score=122.61 Aligned_cols=151 Identities=15% Similarity=0.161 Sum_probs=118.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..|.|.|.++..|.-.++ .++..|. |++.|.-|+.+.||. |+|+|+.+.+|++|=+.+...|.
T Consensus 206 d~ilS~srD~tik~We~~tg-------------~cv~t~~~h~ewvr~v~v~~DGt-i~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 206 DHILSCSRDNTIKAWECDTG-------------YCVKTFPGHSEWVRMVRVNQDGT-IIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred CeeeecccccceeEEecccc-------------eeEEeccCchHhEEEEEecCCee-EEEecCCCceEEEEEeccchhhh
Confidence 58889999999999993333 3555553 777899999999997 66888999999999998764332
Q ss_pred e-eeccCceEEEEE-------------------------eecCCC-------------------CCeeEEEEcCCCCEEE
Q psy2085 83 E-RCFDSEVVTFEI-------------------------LSDDYS-------------------SELNSIAINPVHQLIC 117 (358)
Q Consensus 83 ~-r~~d~e~v~f~~-------------------------LS~D~s-------------------~~In~i~~np~~~lla 117 (358)
+ |.+ ..++.+.. .|-|.+ .+|..++|+|.|++|+
T Consensus 272 ~lR~h-Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ 350 (406)
T KOG0295|consen 272 ELREH-EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL 350 (406)
T ss_pred hhhcc-ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE
Confidence 2 211 11222211 111111 7899999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 118 VGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 118 sGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
++.+|+++++||+++++|..++..|.+-+ +++.|+.+..+++| -| ++|+|..
T Consensus 351 ScaDDktlrvwdl~~~~cmk~~~ah~hfv-----------------t~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 351 SCADDKTLRVWDLKNLQCMKTLEAHEHFV-----------------TSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EEecCCcEEEEEeccceeeeccCCCccee-----------------EEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999999999999888776 78999999999997 57 9999975
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.8e-12 Score=135.17 Aligned_cols=150 Identities=11% Similarity=0.078 Sum_probs=107.0
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+.+..|. ...... ..+.. .....+.....+.++.|+|....+++||+++++|+|||+.+....
T Consensus 496 ~~latgg~D~~I~iwd~~~~~~~-~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~- 568 (793)
T PLN00181 496 EFFATAGVNKKIKIFECESIIKD-GRDIH-----YPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLV- 568 (793)
T ss_pred CEEEEEeCCCEEEEEECCccccc-ccccc-----cceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEE-
Confidence 5778999999999998 322111 01110 011223345678999999864334578889999999999864211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
... ..|++.|++|+|+| ++.+|+||+.||+|++||++++.++.++..+. .+
T Consensus 569 -~~~-----------~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~-~v--------------- 620 (793)
T PLN00181 569 -TEM-----------KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NI--------------- 620 (793)
T ss_pred -EEe-----------cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCC-Ce---------------
Confidence 110 12336899999997 67899999999999999999999998887543 33
Q ss_pred CceeeEEc-CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 162 DESSEEEE-EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs-~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+ ++|..|++ .| +|++||+.+++
T Consensus 621 --~~v~~~~~~g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 621 --CCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred --EEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 678895 56888886 57 99999998765
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-12 Score=122.48 Aligned_cols=94 Identities=21% Similarity=0.361 Sum_probs=73.1
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC--------------------------
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD-------------------------- 99 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D-------------------------- 99 (358)
..|++|+|+|.+++|+++ +||+.+++||+...+++....+.+.++++++..+.
T Consensus 14 d~IS~v~f~~~~~~LLvs-sWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igt 92 (323)
T KOG1036|consen 14 DGISSVKFSPSSSDLLVS-SWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGT 92 (323)
T ss_pred hceeeEEEcCcCCcEEEE-eccCcEEEEeccchhhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCcceeecc
Confidence 579999999999998776 59999999999877666554455566665543211
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe
Q psy2085 100 YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 100 ~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~ 140 (358)
|..+|.||..++.-+.+++||+|++|++||+|....+.+++
T Consensus 93 h~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d 133 (323)
T KOG1036|consen 93 HDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD 133 (323)
T ss_pred CCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc
Confidence 11789999999999999999999999999999655544443
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.3e-11 Score=117.48 Aligned_cols=145 Identities=19% Similarity=0.179 Sum_probs=103.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eec--cCceEEE------EEee-----------------
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCF--DSEVVTF------EILS----------------- 97 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~--d~e~v~f------~~LS----------------- 97 (358)
+.+.++++.|+++|++|++ ++.|-+|+|||..+...... .+. ..+.+.| ++.|
T Consensus 13 ~~~~i~sl~fs~~G~~lit-ss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNk 91 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLIT-SSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNK 91 (311)
T ss_pred CCCceeEEEecCCCCEEEE-ecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCc
Confidence 5678999999999999866 55677999999876422100 000 0111222 1111
Q ss_pred -----cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc-----cc--------c
Q psy2085 98 -----DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE-----GK--------A 159 (358)
Q Consensus 98 -----~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~-----Gt--------R 159 (358)
++|...||+|+.+|.+..+.+|+.|++|++||+|+.+|.+.|.....++ +.|+++|+. |+ |
T Consensus 92 ylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi-~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 92 YLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI-AAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred eEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc-eeECCCCcEEEEecCCCeEEEEEec
Confidence 1223789999999999999999999999999999999999988765554 346666653 22 3
Q ss_pred C--CCc--------------eeeEEcCCCCEEE-Eec--ceEEEECCCCc
Q psy2085 160 S--SDE--------------SSEEEEEEEEEEE-SSD--DDQAWTKEIKK 190 (358)
Q Consensus 160 s--~~P--------------~sI~fs~d~~~ll-SaD--~IKIWD~~tG~ 190 (358)
+ ..| +.|+|||+|+.|+ |.+ .+.+-|.-+|.
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~ 220 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGT 220 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCc
Confidence 2 122 8899999999876 544 89999999998
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=131.02 Aligned_cols=185 Identities=17% Similarity=0.184 Sum_probs=133.6
Q ss_pred ceEEEEeecCCceeeee--eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 3 VEYCYQTNWHKQAVTLV--IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~--~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+|-|.++.|++..--. +..+ ..+.+-+-.+.|..+.|-+.|..+.+|...+++.+.| ++.|||||+.+..-
T Consensus 379 paysfh~~~dg~~qPvpfP~dal----~g~gIPrharq~~tL~HGEvVcAvtIS~~trhVyTgG--kgcVKVWdis~pg~ 452 (705)
T KOG0639|consen 379 PAYSFHVSADGQMQPVPFPPDAL----VGPGIPRHARQINTLAHGEVVCAVTISNPTRHVYTGG--KGCVKVWDISQPGN 452 (705)
T ss_pred ccccceecCCCcccCCCCCchhh----cCCCCCchHHhhhhhccCcEEEEEEecCCcceeEecC--CCeEEEeeccCCCC
Confidence 46777777776422211 1221 2234445566778888999999999999999986544 88999999987533
Q ss_pred ee-eeeccCc----eEEEEEeecCCC-------------------------------CCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 81 KF-ERCFDSE----VVTFEILSDDYS-------------------------------SELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 81 k~-~r~~d~e----~v~f~~LS~D~s-------------------------------~~In~i~~np~~~llasGs~DGt 124 (358)
|+ ..++|+- .+..|.|.+|.. ....++++||+.+++.++..||.
T Consensus 453 k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGn 532 (705)
T KOG0639|consen 453 KSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGN 532 (705)
T ss_pred CCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCc
Confidence 32 2233321 244555666543 34567888999999888899999
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc----------E
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK----------T 191 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~----------~ 191 (358)
|.|||++....+..|.+|.+.+ .+|..+++|..|.| .| +|+.||+++|+ .
T Consensus 533 I~vwDLhnq~~VrqfqGhtDGa-----------------scIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQI 595 (705)
T KOG0639|consen 533 IAVWDLHNQTLVRQFQGHTDGA-----------------SCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQI 595 (705)
T ss_pred EEEEEcccceeeecccCCCCCc-----------------eeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhh
Confidence 9999999999999999988776 78999999999998 58 99999999998 3
Q ss_pred EecCCCCCccccccchhHHhhhc
Q psy2085 192 YNLGPAPKWCGFLDNLTEELEEN 214 (358)
Q Consensus 192 y~lgpap~Wcsfldnlteele~~ 214 (358)
|+||-.|. -||+.--||+.
T Consensus 596 fSLg~cP~----~dWlavGMens 614 (705)
T KOG0639|consen 596 FSLGYCPT----GDWLAVGMENS 614 (705)
T ss_pred eecccCCC----ccceeeecccC
Confidence 48886664 44444456653
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=7e-12 Score=116.49 Aligned_cols=140 Identities=19% Similarity=0.277 Sum_probs=114.8
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF 86 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~ 86 (358)
+|-+.+|++++|+.... ...|.++|+..|+++.+|+||++| + -.|.+.|+.||...+.+ ..+.
T Consensus 159 LSSadd~tVRLWD~rTg-------------t~v~sL~~~s~VtSlEvs~dG~il-T-ia~gssV~Fwdaksf~~--lKs~ 221 (334)
T KOG0278|consen 159 LSSADDKTVRLWDHRTG-------------TEVQSLEFNSPVTSLEVSQDGRIL-T-IAYGSSVKFWDAKSFGL--LKSY 221 (334)
T ss_pred EeeccCCceEEEEeccC-------------cEEEEEecCCCCcceeeccCCCEE-E-EecCceeEEeccccccc--eeec
Confidence 45688999999994333 257888999999999999999976 3 35788999999987543 1222
Q ss_pred cCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCcee
Q psy2085 87 DSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESS 165 (358)
Q Consensus 87 d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~s 165 (358)
+.+ ..|++.+++|+...+++|++|+.+..+|..++..+... .+|.++| .+
T Consensus 222 k~P------------~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpV-----------------hc 272 (334)
T KOG0278|consen 222 KMP------------CNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPV-----------------HC 272 (334)
T ss_pred cCc------------cccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCce-----------------EE
Confidence 211 36889999999999999999999999999999999986 7888887 88
Q ss_pred eEEcCCCCEEEE--ec-ceEEEECCCCcEE
Q psy2085 166 EEEEEEEEEEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 166 I~fs~d~~~llS--aD-~IKIWD~~tG~~y 192 (358)
|.|+|+|..-+| -| +|+||-..-|++|
T Consensus 273 VrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 273 VRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred EEECCCCceeeccCCCceEEEEEecCCCch
Confidence 999999987776 57 9999999877755
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.2e-11 Score=128.52 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=114.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
-||.+++.++++..|....+. .+...+ .|.+.|.++++.. |..++.+|+.|.+++|||+.+.....
T Consensus 219 ~~~~~~s~~~tl~~~~~~~~~------------~i~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd~~sg~C~~ 285 (537)
T KOG0274|consen 219 GFFKSGSDDSTLHLWDLNNGY------------LILTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWDCSTGECTH 285 (537)
T ss_pred CeEEecCCCceeEEeecccce------------EEEeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEecCCCcEEE
Confidence 488899999999999854442 233334 4788999999987 44456789999999999988654321
Q ss_pred eeeccCceEEE------EEee--c-------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 83 ERCFDSEVVTF------EILS--D-------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 83 ~r~~d~e~v~f------~~LS--~-------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
.-..+...+.. ...+ - .|++.|++|..+ +.++++|+.||+|++||++++++
T Consensus 286 ~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 286 SLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred EecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhcee
Confidence 11111111111 1111 1 144889999998 88999999999999999999999
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC-c
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK-K 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG-~ 190 (358)
+.+|.+|...| +++.+.+. ..++| .| +||+||+.++ +
T Consensus 364 l~sl~gH~~~V-----------------~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~ 404 (537)
T KOG0274|consen 364 LKSLSGHTGRV-----------------YSLIVDSE-NRLLSGSLDTTIKVWDLRTKRK 404 (537)
T ss_pred eeeecCCcceE-----------------EEEEecCc-ceEEeeeeccceEeecCCchhh
Confidence 99999998887 77877765 66775 79 9999999999 5
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.7e-12 Score=113.86 Aligned_cols=109 Identities=21% Similarity=0.359 Sum_probs=84.2
Q ss_pred CCEeEEEEcCCCCEEEE-EEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC---
Q psy2085 46 GVSTSVRISPDGQYVLS-TGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI--- 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~Lla-tG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~--- 121 (358)
+.|.+++|+|+|+.+++ +|..+++|.+||+.. ... ..+ . ...+|+|.|||+|++|++||-
T Consensus 60 ~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~-~~i---------~~~---~---~~~~n~i~wsP~G~~l~~~g~~n~ 123 (194)
T PF08662_consen 60 GPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG-KKI---------FSF---G---TQPRNTISWSPDGRFLVLAGFGNL 123 (194)
T ss_pred CceEEEEECcCCCEEEEEEccCCcccEEEcCcc-cEe---------Eee---c---CCCceEEEECCCCCEEEEEEccCC
Confidence 46999999999998654 466778999999962 111 111 1 156899999999999999874
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--------c-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--------D-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--------D-~IKIWD~~tG~ 190 (358)
.|.|++||.++.+.+.+..... . ..++|+|+|++|+++ | .++||+.. |+
T Consensus 124 ~G~l~~wd~~~~~~i~~~~~~~-~------------------t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~ 181 (194)
T PF08662_consen 124 NGDLEFWDVRKKKKISTFEHSD-A------------------TDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GR 181 (194)
T ss_pred CcEEEEEECCCCEEeeccccCc-E------------------EEEEEcCCCCEEEEEEeccceeccccEEEEEec-Ce
Confidence 4789999999988887776332 2 679999999999952 7 99999985 65
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=119.11 Aligned_cols=145 Identities=14% Similarity=0.160 Sum_probs=115.6
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.|.++++|-.|..|..+..- .+-+--+|...|.|+.||.||.|| |||.-+|.|+||+..+...++
T Consensus 78 l~aTGGgDD~AflW~~~~ge------------~~~eltgHKDSVt~~~FshdgtlL-ATGdmsG~v~v~~~stg~~~~-- 142 (399)
T KOG0296|consen 78 LVATGGGDDLAFLWDISTGE------------FAGELTGHKDSVTCCSFSHDGTLL-ATGDMSGKVLVFKVSTGGEQW-- 142 (399)
T ss_pred eEEecCCCceEEEEEccCCc------------ceeEecCCCCceEEEEEccCceEE-EecCCCccEEEEEcccCceEE--
Confidence 46778888889999954441 222333688899999999999976 899999999999998754332
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
.++.++ ..|-=+.|+|...+|+.|+.||.|-+|-+-++.....+.+|..+. +
T Consensus 143 ~~~~e~-----------~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~c-----------------t 194 (399)
T KOG0296|consen 143 KLDQEV-----------EDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPC-----------------T 194 (399)
T ss_pred Eeeccc-----------CceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCc-----------------c
Confidence 222222 456778899999999999999999999999988888999988776 5
Q ss_pred eeEEcCCCCEEEE--ec-ceEEEECCCCcEE
Q psy2085 165 SEEEEEEEEEEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 165 sI~fs~d~~~llS--aD-~IKIWD~~tG~~y 192 (358)
.=.|.|+|+++++ .| +|++||+.+|..+
T Consensus 195 ~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~ 225 (399)
T KOG0296|consen 195 CGEFIPDGKRILTGYDDGTIIVWNPKTGQPL 225 (399)
T ss_pred cccccCCCceEEEEecCceEEEEecCCCcee
Confidence 5679999999997 35 9999999999944
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.8e-12 Score=127.16 Aligned_cols=136 Identities=16% Similarity=0.162 Sum_probs=102.1
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEE-------EEeec--------
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTF-------EILSD-------- 98 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f-------~~LS~-------- 98 (358)
|..+-+|+ .+.|++|.|+++|++| |.|+.++.|.|||..+.... +..++...+-.. ...+-
T Consensus 209 v~~l~~~~-~~~vtSv~ws~~G~~L-avG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~d 286 (484)
T KOG0305|consen 209 VTELCSFG-EELVTSVKWSPDGSHL-AVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHD 286 (484)
T ss_pred eEEeEecC-CCceEEEEECCCCCEE-EEeecCCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEE
Confidence 55566665 7889999999999987 78999999999998753211 111011111000 00000
Q ss_pred ------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceee
Q psy2085 99 ------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSE 166 (358)
Q Consensus 99 ------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI 166 (358)
.|...|..+.|++++..||+||.|+.|.|||..+..++..+..|...| +.+
T Consensus 287 vR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAV-----------------KA~ 349 (484)
T KOG0305|consen 287 VRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAV-----------------KAL 349 (484)
T ss_pred EecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceee-----------------eEe
Confidence 122689999999999999999999999999998888999999888877 899
Q ss_pred EEcCCC-CEEEE----ec-ceEEEECCCCc
Q psy2085 167 EEEEEE-EEEES----SD-DDQAWTKEIKK 190 (358)
Q Consensus 167 ~fs~d~-~~llS----aD-~IKIWD~~tG~ 190 (358)
+|+|-. ..|+| +| +||+||..+|+
T Consensus 350 awcP~q~~lLAsGGGs~D~~i~fwn~~~g~ 379 (484)
T KOG0305|consen 350 AWCPWQSGLLATGGGSADRCIKFWNTNTGA 379 (484)
T ss_pred eeCCCccCceEEcCCCcccEEEEEEcCCCc
Confidence 999965 45664 68 99999999998
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.1e-12 Score=132.91 Aligned_cols=155 Identities=15% Similarity=0.199 Sum_probs=110.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+.+.-+.+..|+-++- .|=.+++.| ||.-+++++.|++-.-+|+.||+-|+.|||||++...-+.
T Consensus 101 NlIAT~s~nG~i~vWdlnk~----------~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~ 170 (839)
T KOG0269|consen 101 NLIATCSTNGVISVWDLNKS----------IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKS 170 (839)
T ss_pred hhheeecCCCcEEEEecCcc----------ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccc
Confidence 35566777777888883221 233577888 5888999999999999999999999999999998542221
Q ss_pred -eeeccCce---EEEE--------EeecCC--------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 83 -ERCFDSEV---VTFE--------ILSDDY--------------------SSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 83 -~r~~d~e~---v~f~--------~LS~D~--------------------s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
.|+ .+|. |.|. ...+.+ .+.|.||.|||+..+|||||.|++|+|||+
T Consensus 171 t~~~-nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~ 249 (839)
T KOG0269|consen 171 TFRS-NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDM 249 (839)
T ss_pred cccc-cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEec
Confidence 111 2222 2221 111111 189999999999999999999999999999
Q ss_pred CCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E----ec-ceEEEECC
Q psy2085 131 RMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S----SD-DDQAWTKE 187 (358)
Q Consensus 131 Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S----aD-~IKIWD~~ 187 (358)
.+.. ++.+++.- .++ ..|.|-|..++.+ | -| .|+|||+.
T Consensus 250 t~~~~~~~~tInTi-apv-----------------~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr 296 (839)
T KOG0269|consen 250 TDSRAKPKHTINTI-APV-----------------GRVKWRPARSYHLATCSMVVDTSVHVWDVR 296 (839)
T ss_pred cCCCccceeEEeec-cee-----------------eeeeeccCccchhhhhhccccceEEEEeec
Confidence 7654 34555432 233 7799999876554 3 26 99999996
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=6.8e-12 Score=119.08 Aligned_cols=138 Identities=21% Similarity=0.282 Sum_probs=97.0
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.++|||+++..|+ ..+. +.-.++-+..|.|+..+.+ .| ..|+.+.+|.+||++++..-+.+.
T Consensus 110 IsgsWD~~ik~wD~R~~~--------------~~~~~d~~kkVy~~~v~g~--~L-vVg~~~r~v~iyDLRn~~~~~q~r 172 (323)
T KOG1036|consen 110 ISGSWDKTIKFWDPRNKV--------------VVGTFDQGKKVYCMDVSGN--RL-VVGTSDRKVLIYDLRNLDEPFQRR 172 (323)
T ss_pred EEcccCccEEEEeccccc--------------cccccccCceEEEEeccCC--EE-EEeecCceEEEEEcccccchhhhc
Confidence 5899999999999 3311 2223445567888888744 45 456678999999999875443211
Q ss_pred ---ccCce--------------------EEEEEeecC-------CC--------------CCeeEEEEcCCCCEEEEEeC
Q psy2085 86 ---FDSEV--------------------VTFEILSDD-------YS--------------SELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 86 ---~d~e~--------------------v~f~~LS~D-------~s--------------~~In~i~~np~~~llasGs~ 121 (358)
+...+ |..+.+.+. |. .+||+|+|+|-|+.|||||.
T Consensus 173 eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGs 252 (323)
T KOG1036|consen 173 ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGS 252 (323)
T ss_pred cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCC
Confidence 11111 111111111 00 58999999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
||.|.+||+.+++++..|..-..+| .+|+|+.+|..|+.+
T Consensus 253 DG~V~~Wd~~~rKrl~q~~~~~~SI-----------------~slsfs~dG~~LAia 292 (323)
T KOG1036|consen 253 DGIVNIWDLFNRKRLKQLAKYETSI-----------------SSLSFSMDGSLLAIA 292 (323)
T ss_pred CceEEEccCcchhhhhhccCCCCce-----------------EEEEeccCCCeEEEE
Confidence 9999999999999998887543344 679999999999854
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.5e-12 Score=123.94 Aligned_cols=175 Identities=16% Similarity=0.218 Sum_probs=122.5
Q ss_pred ccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc------------eeeeeeccC-ce------E
Q psy2085 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS------------MKFERCFDS-EV------V 91 (358)
Q Consensus 31 ~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls------------lk~~r~~d~-e~------v 91 (358)
....+|++.+.+.|++.|++++..|....|+||++..+.|.|||..... ++...|.+. .. .
T Consensus 110 ~~~~~v~i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~ 189 (422)
T KOG0264|consen 110 AVSGKVEISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ 189 (422)
T ss_pred ccccceEEEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccccc
Confidence 3344899999999999999999999999999999999999999976421 122233331 00 1
Q ss_pred EEEEee--cC--------------------------CCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCC--CceeEEEe
Q psy2085 92 TFEILS--DD--------------------------YSSELNSIAINPVH-QLICVGTIEGKVEAWDPRM--KVKAGTLD 140 (358)
Q Consensus 92 ~f~~LS--~D--------------------------~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs--~~~i~~L~ 140 (358)
.+..|+ .| +++.|+.|+|+|.| .+|+++++||.+.|||.|+ .++.....
T Consensus 190 ~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ 269 (422)
T KOG0264|consen 190 EGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVK 269 (422)
T ss_pred ceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccccc
Confidence 111222 11 22789999999987 4999999999999999995 45556666
Q ss_pred CCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc----EE-ecCCCC---Cccccccchh
Q psy2085 141 CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK----TY-NLGPAP---KWCGFLDNLT 208 (358)
Q Consensus 141 ~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~----~y-~lgpap---~Wcsfldnlt 208 (358)
+|...+ +++.|+|-+..|+ | +| +|.+||+++-+ ++ ...++- .|....+++.
T Consensus 270 ah~~~v-----------------n~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvL 332 (422)
T KOG0264|consen 270 AHSAEV-----------------NCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVL 332 (422)
T ss_pred ccCCce-----------------eEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCcee
Confidence 777766 8999999877766 3 68 99999999865 22 122221 1666666665
Q ss_pred HHhhhccccceeec
Q psy2085 209 EELEENIIENVYDD 222 (358)
Q Consensus 209 eele~~~~~~vydd 222 (358)
..-.++.-..|||-
T Consensus 333 ASSg~D~rl~vWDl 346 (422)
T KOG0264|consen 333 ASSGTDRRLNVWDL 346 (422)
T ss_pred EecccCCcEEEEec
Confidence 43333344455554
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.3e-12 Score=122.28 Aligned_cols=120 Identities=14% Similarity=0.113 Sum_probs=85.0
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce-eeeee
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM-KFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl-k~~r~ 85 (358)
|++-|.++.-|+.+.. +++.. ..|.+.|-|+.|.. + ++.+|+.|.+|+|||+++..+ +..-|
T Consensus 212 SGlrDnTikiWD~n~~-------------~c~~~L~GHtGSVLCLqyd~--r-viisGSSDsTvrvWDv~tge~l~tlih 275 (499)
T KOG0281|consen 212 SGLRDNTIKIWDKNSL-------------ECLKILTGHTGSVLCLQYDE--R-VIVSGSSDSTVRVWDVNTGEPLNTLIH 275 (499)
T ss_pred cccccCceEEeccccH-------------HHHHhhhcCCCcEEeeeccc--e-EEEecCCCceEEEEeccCCchhhHHhh
Confidence 4566777888872211 12222 25789999999854 3 778999999999999997543 21111
Q ss_pred ccCceEE--------EEEeecCCC----------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 86 FDSEVVT--------FEILSDDYS----------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 86 ~d~e~v~--------f~~LS~D~s----------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
+ .+.|- ....|.|.+ ..||+|.|+. .+++++|.|.||++||+.+...
T Consensus 276 H-ceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~--kyIVsASgDRTikvW~~st~ef 352 (499)
T KOG0281|consen 276 H-CEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEF 352 (499)
T ss_pred h-cceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeecccc--ceEEEecCCceEEEEeccceee
Confidence 1 22221 123345544 7899999976 4999999999999999999999
Q ss_pred eEEEeCCCCcc
Q psy2085 136 AGTLDCAFNCI 146 (358)
Q Consensus 136 i~~L~~~~~~v 146 (358)
+.+|.+|...+
T Consensus 353 vRtl~gHkRGI 363 (499)
T KOG0281|consen 353 VRTLNGHKRGI 363 (499)
T ss_pred ehhhhcccccc
Confidence 99999998776
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.1e-11 Score=121.99 Aligned_cols=133 Identities=20% Similarity=0.180 Sum_probs=101.2
Q ss_pred EEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCceEEEE----------EeecCCC-----
Q psy2085 39 IQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSEVVTFE----------ILSDDYS----- 101 (358)
Q Consensus 39 iqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e~v~f~----------~LS~D~s----- 101 (358)
++.|. |.-.|+.+.|+|+...+ .+++.+-.|+||.+...+.+ ..|.++.. |.+. ..|.|.+
T Consensus 254 l~~~~Gh~kki~~v~~~~~~~~v-~~aSad~~i~vws~~~~s~~~~~~~h~~~-V~~ls~h~tgeYllsAs~d~~w~Fsd 331 (506)
T KOG0289|consen 254 LATLKGHTKKITSVKFHKDLDTV-ITASADEIIRVWSVPLSSEPTSSRPHEEP-VTGLSLHPTGEYLLSASNDGTWAFSD 331 (506)
T ss_pred hhhccCcceEEEEEEeccchhhe-eecCCcceEEeeccccccCcccccccccc-ceeeeeccCCcEEEEecCCceEEEEE
Confidence 33443 55679999999999865 56778889999998754322 22333322 2221 1122211
Q ss_pred ----------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCcee
Q psy2085 102 ----------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESS 165 (358)
Q Consensus 102 ----------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~s 165 (358)
-.+.+.+|+|+|-+|++|+.||.|+|||+.++..+..+.+|..+| +.
T Consensus 332 ~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~v-----------------k~ 394 (506)
T KOG0289|consen 332 ISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPV-----------------KA 394 (506)
T ss_pred ccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCce-----------------eE
Confidence 248999999999999999999999999999999999999999988 89
Q ss_pred eEEcCCCCEEEE-ec--ceEEEECCCCc
Q psy2085 166 EEEEEEEEEEES-SD--DDQAWTKEIKK 190 (358)
Q Consensus 166 I~fs~d~~~llS-aD--~IKIWD~~tG~ 190 (358)
|+|+.+|-+|++ +| .|++||++.-+
T Consensus 395 i~FsENGY~Lat~add~~V~lwDLRKl~ 422 (506)
T KOG0289|consen 395 ISFSENGYWLATAADDGSVKLWDLRKLK 422 (506)
T ss_pred EEeccCceEEEEEecCCeEEEEEehhhc
Confidence 999999999997 66 69999998766
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.9e-11 Score=120.46 Aligned_cols=147 Identities=18% Similarity=0.175 Sum_probs=106.1
Q ss_pred cceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 2 SVEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
+-+|..+.|.++...==+...++.|-...+ =.-.-.+++++|.|||- |+++|+.|+.|+|||+.+...
T Consensus 314 tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~----------~~s~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks~~~- 381 (506)
T KOG0289|consen 314 TGEYLLSASNDGTWAFSDISSGSQLTVVSD----------ETSDVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKSQTN- 381 (506)
T ss_pred CCcEEEEecCCceEEEEEccCCcEEEEEee----------ccccceeEEeeEcCCce-EEeccCCCceEEEEEcCCccc-
Confidence 458999999988633333344433322111 01123478999999995 789999999999999986431
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC-ccccccCCCccccccC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN-CISNERDTEEKEGKAS 160 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~v~~~~~i~gl~GtRs 160 (358)
+-.| |.|++.|.+|+|+.+|.+||++++||.|++||+|.-+...++..... .+
T Consensus 382 --------~a~F----pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v-------------- 435 (506)
T KOG0289|consen 382 --------VAKF----PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEV-------------- 435 (506)
T ss_pred --------cccC----CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccc--------------
Confidence 1112 34568999999999999999999999999999999887777765432 22
Q ss_pred CCceeeEEcCCCCEEEEe--c-ceEEEECCCC
Q psy2085 161 SDESSEEEEEEEEEEESS--D-DDQAWTKEIK 189 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG 189 (358)
+++.|.+.|++|+.+ | .|.+.+..+.
T Consensus 436 ---~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k 464 (506)
T KOG0289|consen 436 ---NSLSFDQSGTYLGIAGSDLQVYICKKKTK 464 (506)
T ss_pred ---eeEEEcCCCCeEEeecceeEEEEEecccc
Confidence 889999999999864 4 6666665543
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.6e-12 Score=120.04 Aligned_cols=134 Identities=14% Similarity=0.153 Sum_probs=96.0
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee------eeeccC--ceEEEEEeecCCCCCeeEEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF------ERCFDS--EVVTFEILSDDYSSELNSIA 108 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~------~r~~d~--e~v~f~~LS~D~s~~In~i~ 108 (358)
|-..--+|..+|.+.+|||||.+ +|||+.|..|+|+|++.+-.|- ....++ +++.. --||.+.||++.
T Consensus 104 Et~ylt~HK~~cR~aafs~DG~l-vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRT---lYDH~devn~l~ 179 (430)
T KOG0640|consen 104 ETKYLTSHKSPCRAAAFSPDGSL-VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRT---LYDHVDEVNDLD 179 (430)
T ss_pred ceEEEeecccceeeeeeCCCCcE-EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEee---hhhccCccccee
Confidence 33333457789999999999984 5899999999999998532111 011111 12211 125568999999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceE
Q psy2085 109 INPVHQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQ 182 (358)
Q Consensus 109 ~np~~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IK 182 (358)
|+|...+|++|+.|++|+++|...-.. ..++. ...++ .+|+|||.|.+|+- .| +++
T Consensus 180 FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q-d~~~v-----------------rsiSfHPsGefllvgTdHp~~r 241 (430)
T KOG0640|consen 180 FHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ-DTEPV-----------------RSISFHPSGEFLLVGTDHPTLR 241 (430)
T ss_pred ecchhheEEeccCCCeEEEEecccHHHHHHHHHhh-cccee-----------------eeEeecCCCceEEEecCCCcee
Confidence 999999999999999999999854321 12222 22333 88999999999885 67 999
Q ss_pred EEECCCCcEE
Q psy2085 183 AWTKEIKKTY 192 (358)
Q Consensus 183 IWD~~tG~~y 192 (358)
++|++|-++|
T Consensus 242 lYdv~T~Qcf 251 (430)
T KOG0640|consen 242 LYDVNTYQCF 251 (430)
T ss_pred EEeccceeEe
Confidence 9999987744
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.6e-11 Score=126.95 Aligned_cols=156 Identities=17% Similarity=0.235 Sum_probs=106.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+|.|-|||+.+|....+ ++|.-|.|+.-|+||+|.| |.+|+ .+|+-|+.||||++.+..
T Consensus 381 ~fLLSSSMDKTVRLWh~~~~-------------~CL~~F~HndfVTcVaFnPvDDryF-iSGSLD~KvRiWsI~d~~--- 443 (712)
T KOG0283|consen 381 NFLLSSSMDKTVRLWHPGRK-------------ECLKVFSHNDFVTCVAFNPVDDRYF-ISGSLDGKVRLWSISDKK--- 443 (712)
T ss_pred CeeEeccccccEEeecCCCc-------------ceeeEEecCCeeEEEEecccCCCcE-eecccccceEEeecCcCe---
Confidence 47899999999999995544 7999999999999999999 66665 689999999999998642
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce------------------eEEEeCC-C
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK------------------AGTLDCA-F 143 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~------------------i~~L~~~-~ 143 (358)
++...-+ ..-|++++|.|+|+..+.|+-+|.+++++.+.-+. |.-|... .
T Consensus 444 -------Vv~W~Dl----~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~ 512 (712)
T KOG0283|consen 444 -------VVDWNDL----RDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPG 512 (712)
T ss_pred -------eEeehhh----hhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCC
Confidence 2211000 03588888888888888888888888887754332 2222221 1
Q ss_pred Cc----ccc-ccCC---Ccc--c------cccC-CCceeeEEcCCCCEEEE-e-c-ceEEEECC
Q psy2085 144 NC----ISN-ERDT---EEK--E------GKAS-SDESSEEEEEEEEEEES-S-D-DDQAWTKE 187 (358)
Q Consensus 144 ~~----v~~-~~~i---~gl--~------GtRs-~~P~sI~fs~d~~~llS-a-D-~IKIWD~~ 187 (358)
.+ |+. +..| +|. . |-++ +.+.+-+|+.||++|+| + | -|.||+..
T Consensus 513 ~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 513 DPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred CCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCC
Confidence 11 111 1111 110 0 2221 12277899999999997 3 4 99999973
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.7e-11 Score=111.51 Aligned_cols=152 Identities=19% Similarity=0.171 Sum_probs=108.5
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.++|+||++..|+ .+.| .++..+-.+.=.-+.|||||+|+++ |.-|..|...|..+....-++.
T Consensus 81 atas~dk~ir~wd~r~~k--------------~~~~i~~~~eni~i~wsp~g~~~~~-~~kdD~it~id~r~~~~~~~~~ 145 (313)
T KOG1407|consen 81 ATASGDKTIRIWDIRSGK--------------CTARIETKGENINITWSPDGEYIAV-GNKDDRITFIDARTYKIVNEEQ 145 (313)
T ss_pred EEecCCceEEEEEeccCc--------------EEEEeeccCcceEEEEcCCCCEEEE-ecCcccEEEEEecccceeehhc
Confidence 5789999999999 5554 3444444444566899999999865 5567789999987643221111
Q ss_pred ccCceEE------------------EEEee-----cC-----CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 86 FDSEVVT------------------FEILS-----DD-----YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 86 ~d~e~v~------------------f~~LS-----~D-----~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
...++.. ..+|+ |- |....-||.|+|+|..||+|+.|-.|.+||+..--|+.
T Consensus 146 ~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R 225 (313)
T KOG1407|consen 146 FKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICER 225 (313)
T ss_pred ccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhe
Confidence 1111111 11221 11 11456677789999999999999999999998877888
Q ss_pred EEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 138 TLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
++.-..-+| ..|+||.+|++|+|+ | .|-|=+.+||.
T Consensus 226 ~isRldwpV-----------------RTlSFS~dg~~lASaSEDh~IDIA~vetGd 264 (313)
T KOG1407|consen 226 CISRLDWPV-----------------RTLSFSHDGRMLASASEDHFIDIAEVETGD 264 (313)
T ss_pred eeccccCce-----------------EEEEeccCcceeeccCccceEEeEecccCC
Confidence 887666666 889999999999984 6 88888888887
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.3e-11 Score=126.36 Aligned_cols=117 Identities=18% Similarity=0.278 Sum_probs=86.3
Q ss_pred EEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+++.+. |.++|++|.+. +.++ .+|+||++|+|||+.+. +|...+ + .|++.|.++.+.+. +.+
T Consensus 323 ~l~l~~~h~~~V~~v~~~--~~~l-vsgs~d~~v~VW~~~~~--~cl~sl----------~-gH~~~V~sl~~~~~-~~~ 385 (537)
T KOG0274|consen 323 CLNLLRGHTGPVNCVQLD--EPLL-VSGSYDGTVKVWDPRTG--KCLKSL----------S-GHTGRVYSLIVDSE-NRL 385 (537)
T ss_pred eEEEeccccccEEEEEec--CCEE-EEEecCceEEEEEhhhc--eeeeee----------c-CCcceEEEEEecCc-ceE
Confidence 344444 77778888887 4444 56778888888887743 332222 1 13478889888766 899
Q ss_pred EEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 117 CVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|+.|++|++||+++. +|+.+|.+|...+ ..+.+ .++.|+| +| +||+||..+|+
T Consensus 386 ~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v-----------------~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~ 444 (537)
T KOG0274|consen 386 LSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV-----------------SSLLL--RDNFLVSSSADGTIKLWDAEEGE 444 (537)
T ss_pred EeeeeccceEeecCCchhhhhhhhcCCcccc-----------------ccccc--ccceeEeccccccEEEeecccCc
Confidence 99999999999999999 9999999987765 23333 4567886 79 99999999988
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-11 Score=115.51 Aligned_cols=153 Identities=17% Similarity=0.159 Sum_probs=114.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee----CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE----MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe----~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
.|-.|+.+|+-++.|+ ++.-- +.+..+--.-.+|-.-+ |.-+|.++-|-|-..=++.+++.|.++||||++++
T Consensus 57 rymlSGgadgsi~v~Dl~n~t~--~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTl 134 (397)
T KOG4283|consen 57 RYMLSGGADGSIAVFDLQNATD--YEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTL 134 (397)
T ss_pred eEEeecCCCccEEEEEeccccc--hhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecccccceEEEeecccc
Confidence 5999999999999999 32110 01111111111221222 33468899999965557889999999999999986
Q ss_pred ceeeeeeccCceEEEEEeecCCCCCeeEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcc
Q psy2085 79 SMKFERCFDSEVVTFEILSDDYSSELNSIAINP---VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 79 slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np---~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl 155 (358)
. ++++|.+- +.|.+-+++| .|.|+|+|+.|-.|++-|+.+|.+.++|.+|.+.|
T Consensus 135 Q---------~a~~F~me-----~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~v--------- 191 (397)
T KOG4283|consen 135 Q---------EAVDFKME-----GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGV--------- 191 (397)
T ss_pred e---------eeEEeecC-----ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCce---------
Confidence 4 23444432 4577778887 37899999999999999999999999999999887
Q ss_pred ccccCCCceeeEEcCCCCEEE---Eec-ceEEEECCCC
Q psy2085 156 EGKASSDESSEEEEEEEEEEE---SSD-DDQAWTKEIK 189 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~ll---SaD-~IKIWD~~tG 189 (358)
.++.|+|...+|+ |+| .||+||++.-
T Consensus 192 --------laV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 192 --------LAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred --------EEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 8899999999988 379 9999999753
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.6e-11 Score=125.80 Aligned_cols=153 Identities=15% Similarity=0.166 Sum_probs=114.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+..|.|-|-+++-|.=..+ .+|.-+ .|..-|-|.+|.|.... +++++-|.+|||||+..+..|..
T Consensus 107 WIlSASDDQTIrIWNwqsr-------------~~iavltGHnHYVMcAqFhptEDl-IVSaSLDQTVRVWDisGLRkk~~ 172 (1202)
T KOG0292|consen 107 WILSASDDQTIRIWNWQSR-------------KCIAVLTGHNHYVMCAQFHPTEDL-IVSASLDQTVRVWDISGLRKKNK 172 (1202)
T ss_pred eEEEccCCCeEEEEeccCC-------------ceEEEEecCceEEEeeccCCccce-EEEecccceEEEEeecchhccCC
Confidence 4788999999999982222 133333 47778999999997764 47888999999999986543311
Q ss_pred e-----------ecc-------CceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEEeCCC
Q psy2085 84 R-----------CFD-------SEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK--AGTLDCAF 143 (358)
Q Consensus 84 r-----------~~d-------~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~--i~~L~~~~ 143 (358)
. +.+ --+|++.. ++|..+||-++|+|...+|+||++|..|++|-+..-+. +-+..+|.
T Consensus 173 ~pg~~e~~~~~~~~~~dLfg~~DaVVK~VL--EGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~ 250 (1202)
T KOG0292|consen 173 APGSLEDQMRGQQGNSDLFGQTDAVVKHVL--EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHY 250 (1202)
T ss_pred CCCCchhhhhccccchhhcCCcCeeeeeee--cccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhccc
Confidence 0 000 12344433 44558999999999999999999999999998754442 55667888
Q ss_pred CccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 144 NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 144 ~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+ .++-|||..+.|+| -| +|+|||+...+
T Consensus 251 nnV-----------------ssvlfhp~q~lIlSnsEDksirVwDm~kRt 283 (1202)
T KOG0292|consen 251 NNV-----------------SSVLFHPHQDLILSNSEDKSIRVWDMTKRT 283 (1202)
T ss_pred CCc-----------------ceEEecCccceeEecCCCccEEEEeccccc
Confidence 877 78999999999998 47 99999997655
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-11 Score=114.28 Aligned_cols=108 Identities=15% Similarity=0.279 Sum_probs=90.2
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
+.+|++. ||..+.||+|+|+|+|+ |+|+.|..|.+||+.+| -|+|++.. -|| +|..|+||-++++
T Consensus 180 kpv~si~AH~snCicI~f~p~Gryf-A~GsADAlvSLWD~~EL--iC~R~isR---------ldw--pVRTlSFS~dg~~ 245 (313)
T KOG1407|consen 180 KPVQSIKAHPSNCICIEFDPDGRYF-ATGSADALVSLWDVDEL--ICERCISR---------LDW--PVRTLSFSHDGRM 245 (313)
T ss_pred ccccccccCCcceEEEEECCCCceE-eeccccceeeccChhHh--hhheeecc---------ccC--ceEEEEeccCcce
Confidence 4455664 88899999999999997 78999999999999975 45555421 133 7999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
||+||+|..|-|=++.+|..+..+.+.... .+|+|||...+|+
T Consensus 246 lASaSEDh~IDIA~vetGd~~~eI~~~~~t------------------~tVAWHPk~~LLA 288 (313)
T KOG1407|consen 246 LASASEDHFIDIAEVETGDRVWEIPCEGPT------------------FTVAWHPKRPLLA 288 (313)
T ss_pred eeccCccceEEeEecccCCeEEEeeccCCc------------------eeEEecCCCceee
Confidence 999999999999999999999999865433 7899999988776
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.4e-11 Score=116.79 Aligned_cols=141 Identities=16% Similarity=0.135 Sum_probs=104.5
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF 86 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~ 86 (358)
.++|-|+...-|+-+.. + + .+.--.|...|.|.+|+|-..++++||+||+.||+||+.....
T Consensus 127 ~s~sDd~v~k~~d~s~a--------~---v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~------ 188 (487)
T KOG0310|consen 127 VSGSDDKVVKYWDLSTA--------Y---V-QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTS------ 188 (487)
T ss_pred EecCCCceEEEEEcCCc--------E---E-EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCc------
Confidence 35556666666664333 1 1 2222248889999999998888999999999999999986531
Q ss_pred cCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEeCCCCccccccCCCccccccCCCcee
Q psy2085 87 DSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK-AGTLDCAFNCISNERDTEEKEGKASSDESS 165 (358)
Q Consensus 87 d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~-i~~L~~~~~~v~~~~~i~gl~GtRs~~P~s 165 (358)
.+ .+-|+..+|..|.+-|.+++||++|- ..|++||+-+|.. +.....|.-.+ ++
T Consensus 189 --~v-----~elnhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtV-----------------Tc 243 (487)
T KOG0310|consen 189 --RV-----VELNHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTV-----------------TC 243 (487)
T ss_pred --ee-----EEecCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceE-----------------EE
Confidence 11 11233368999999999999999874 6899999986654 45555576666 78
Q ss_pred eEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 166 EEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 166 I~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+..+++.|+| .| .|||+|..+-+
T Consensus 244 L~l~s~~~rLlS~sLD~~VKVfd~t~~K 271 (487)
T KOG0310|consen 244 LRLASDSTRLLSGSLDRHVKVFDTTNYK 271 (487)
T ss_pred EEeecCCceEeecccccceEEEEccceE
Confidence 999999999997 58 99999977665
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.2e-10 Score=117.08 Aligned_cols=134 Identities=14% Similarity=0.196 Sum_probs=97.6
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
.-|+||+|||||..++++| .|++|.|||=.+...-.+ ++ -++.|.++|.+|+|+|+++.|+|+|.|.++
T Consensus 191 kFV~~VRysPDG~~Fat~g-sDgki~iyDGktge~vg~--l~--------~~~aHkGsIfalsWsPDs~~~~T~SaDkt~ 259 (603)
T KOG0318|consen 191 KFVNCVRYSPDGSRFATAG-SDGKIYIYDGKTGEKVGE--LE--------DSDAHKGSIFALSWSPDSTQFLTVSADKTI 259 (603)
T ss_pred cceeeEEECCCCCeEEEec-CCccEEEEcCCCccEEEE--ec--------CCCCccccEEEEEECCCCceEEEecCCceE
Confidence 4699999999999775554 689999999665432111 10 034456899999999999999999999999
Q ss_pred EEEeCCCCceeEEEeCCCCc----cccccCCCcc-----ccc--------------c--CCCc-eeeEEcCCCCEEEE--
Q psy2085 126 EAWDPRMKVKAGTLDCAFNC----ISNERDTEEK-----EGK--------------A--SSDE-SSEEEEEEEEEEES-- 177 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~----v~~~~~i~gl-----~Gt--------------R--s~~P-~sI~fs~d~~~llS-- 177 (358)
+|||+.+++++.++...... +.+-...+.+ .|+ + +.++ +.+..+|++.+|+|
T Consensus 260 KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs 339 (603)
T KOG0318|consen 260 KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS 339 (603)
T ss_pred EEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec
Confidence 99999999999988765431 1111111111 144 1 1222 88999999999998
Q ss_pred ec-ceEEEECCCCc
Q psy2085 178 SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 aD-~IKIWD~~tG~ 190 (358)
.| .|-=||..+|.
T Consensus 340 yDG~I~~W~~~~g~ 353 (603)
T KOG0318|consen 340 YDGHINSWDSGSGT 353 (603)
T ss_pred cCceEEEEecCCcc
Confidence 46 99999998886
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.5e-10 Score=104.63 Aligned_cols=140 Identities=6% Similarity=0.055 Sum_probs=101.9
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.++.+.++.+..|+.... ++++.+.....+.++.|+|||+.++++++.++.|++||+.+.... +.
T Consensus 4 ~~s~~~d~~v~~~d~~t~-------------~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~ 68 (300)
T TIGR03866 4 YVSNEKDNTISVIDTATL-------------EVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVI--GT 68 (300)
T ss_pred EEEecCCCEEEEEECCCC-------------ceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEE--Ee
Confidence 457788899999983222 244455555567889999999988788888899999999864321 11
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLI-CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~ll-asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
.. .. ..+..++|+|+++.+ ++++.|++|.+||+++++.+..+..+..+ .
T Consensus 69 ~~----------~~--~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~------------------~ 118 (300)
T TIGR03866 69 LP----------SG--PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEP------------------E 118 (300)
T ss_pred cc----------CC--CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCc------------------c
Confidence 10 01 235678999998865 45567899999999998888877643322 6
Q ss_pred eeEEcCCCCEEEEe--c--ceEEEECCCCc
Q psy2085 165 SEEEEEEEEEEESS--D--DDQAWTKEIKK 190 (358)
Q Consensus 165 sI~fs~d~~~llSa--D--~IKIWD~~tG~ 190 (358)
.+.|+|+|..++++ + .+.+||..+++
T Consensus 119 ~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~ 148 (300)
T TIGR03866 119 GMAVSPDGKIVVNTSETTNMAHFIDTKTYE 148 (300)
T ss_pred eEEECCCCCEEEEEecCCCeEEEEeCCCCe
Confidence 79999999988853 3 57888998876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.6e-11 Score=109.73 Aligned_cols=116 Identities=17% Similarity=0.210 Sum_probs=96.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
..++|+.++|.-||+|.+++|+ +.+||+|+.....+.-... .+...|..++.+.++.-||+||.|.
T Consensus 16 ~qgaV~avryN~dGnY~ltcGs-drtvrLWNp~rg~liktYs-------------ghG~EVlD~~~s~Dnskf~s~GgDk 81 (307)
T KOG0316|consen 16 AQGAVRAVRYNVDGNYCLTCGS-DRTVRLWNPLRGALIKTYS-------------GHGHEVLDAALSSDNSKFASCGGDK 81 (307)
T ss_pred cccceEEEEEccCCCEEEEcCC-CceEEeecccccceeeeec-------------CCCceeeeccccccccccccCCCCc
Confidence 5689999999999999987765 7899999987654321111 1114577788888999999999999
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.|.+||+.+|+.+..+.+|...+ +.|.|+.+...|+| .| ++++||.++..
T Consensus 82 ~v~vwDV~TGkv~Rr~rgH~aqV-----------------NtV~fNeesSVv~SgsfD~s~r~wDCRS~s 134 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRGHLAQV-----------------NTVRFNEESSVVASGSFDSSVRLWDCRSRS 134 (307)
T ss_pred eEEEEEcccCeeeeeccccccee-----------------eEEEecCcceEEEeccccceeEEEEcccCC
Confidence 99999999999999999998877 88999999999997 58 99999998653
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=9.8e-11 Score=114.44 Aligned_cols=124 Identities=12% Similarity=0.133 Sum_probs=101.7
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~ 121 (358)
.|.+.|-.++|.|-...++|+|+.|.+|+||++.+..+. +.+...++.. .+|+..|..|+|+|. .+.|+|+|.
T Consensus 79 GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~--~~ltepvv~L----~gH~rrVg~V~wHPtA~NVLlsag~ 152 (472)
T KOG0303|consen 79 GHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLT--RDLTEPVVEL----YGHQRRVGLVQWHPTAPNVLLSAGS 152 (472)
T ss_pred CccccccccccCccCCceeecCCCCceEEEEECCCcccc--cCcccceEEE----eecceeEEEEeecccchhhHhhccC
Confidence 377889999999988889999999999999999875432 2222233322 234468999999997 578999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|.+|.+|+..++..+-+|+ |...+ .++.|+.+|.+|++ -| .|+|||.++|+
T Consensus 153 Dn~v~iWnv~tgeali~l~-hpd~i-----------------~S~sfn~dGs~l~TtckDKkvRv~dpr~~~ 206 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITLD-HPDMV-----------------YSMSFNRDGSLLCTTCKDKKVRVIDPRRGT 206 (472)
T ss_pred CceEEEEeccCCceeeecC-CCCeE-----------------EEEEeccCCceeeeecccceeEEEcCCCCc
Confidence 9999999999999988888 66665 88999999999997 47 99999999988
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.8e-10 Score=114.60 Aligned_cols=166 Identities=16% Similarity=0.115 Sum_probs=111.0
Q ss_pred eecCCceeeee-eccCcccCCCcccccce-eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eeeeee
Q psy2085 9 TNWHKQAVTLV-IIGGRYLLPTNDIRRRI-ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKFERC 85 (358)
Q Consensus 9 ~~~~~~~~~~~-~~~~r~lk~d~~~~~rI-eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~~r~ 85 (358)
++.+-++..|. ..+...+-.-.+++.-+ +..++-.-..-|++++|+.||..| |||.++|.++||+..... ..+..
T Consensus 197 g~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~L-atG~~~G~~riw~~~G~l~~tl~~- 274 (524)
T KOG0273|consen 197 GSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLL-ATGSEDGEARIWNKDGNLISTLGQ- 274 (524)
T ss_pred cCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeE-EEeecCcEEEEEecCchhhhhhhc-
Confidence 45666677777 22222222223333332 223444444569999999999865 899999999999987421 11111
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc-ccc------cc---CCCcc
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC-ISN------ER---DTEEK 155 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~-v~~------~~---~i~gl 155 (358)
|.++|.++.||..+.+|++|+-||++-+||.-++..-..+..|..+ +.. .| +.+|.
T Consensus 275 --------------HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~ 340 (524)
T KOG0273|consen 275 --------------HKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGC 340 (524)
T ss_pred --------------cCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCce
Confidence 2278999999999999999999999999999999887777655544 110 01 12221
Q ss_pred -c----------cc--cCCCc-eeeEEcCCCCEEEE-e-c-ceEEEECCCCc
Q psy2085 156 -E----------GK--ASSDE-SSEEEEEEEEEEES-S-D-DDQAWTKEIKK 190 (358)
Q Consensus 156 -~----------Gt--Rs~~P-~sI~fs~d~~~llS-a-D-~IKIWD~~tG~ 190 (358)
. +| .+..+ +.|.|+|.|.+|+| + | |+|||....+.
T Consensus 341 i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~ 392 (524)
T KOG0273|consen 341 IHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN 392 (524)
T ss_pred EEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc
Confidence 0 22 22333 89999999999997 3 5 99999976655
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=9.3e-11 Score=115.01 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=103.3
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
..++|.|+++..|+-.+. +++...-+-..++.|..++ ..+.+|-.|..||.||.........-.
T Consensus 276 vVsgs~DRtiK~WDl~k~-------------~C~kt~l~~S~cnDI~~~~---~~~~SgH~DkkvRfwD~Rs~~~~~sv~ 339 (459)
T KOG0288|consen 276 VVSGSADRTIKLWDLQKA-------------YCSKTVLPGSQCNDIVCSI---SDVISGHFDKKVRFWDIRSADKTRSVP 339 (459)
T ss_pred eeeccccchhhhhhhhhh-------------heeccccccccccceEecc---eeeeecccccceEEEeccCCceeeEee
Confidence 568999999999993333 3444444455678888872 356788889999999976532211100
Q ss_pred ccCceEEEEEe----------ecCCC-----------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 86 FDSEVVTFEIL----------SDDYS-----------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 86 ~d~e~v~f~~L----------S~D~s-----------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
... -|+...+ ++|-+ +.++.+.|||++.++|+||.||.|.||+.-+
T Consensus 340 ~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~t 418 (459)
T KOG0288|consen 340 LGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFT 418 (459)
T ss_pred cCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccC
Confidence 000 1111111 22211 4588999999999999999999999999999
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEE
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAW 184 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIW 184 (358)
+++...+....+.. .+ ++++|+|.|..|+++| .+.+|
T Consensus 419 gKlE~~l~~s~s~~----aI-----------~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 419 GKLEKVLSLSTSNA----AI-----------TSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred ceEEEEeccCCCCc----ce-----------EEEEEcCCCchhhcccCCcceEec
Confidence 99988887654430 11 8899999999999987 88898
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.2e-11 Score=119.78 Aligned_cols=129 Identities=15% Similarity=0.169 Sum_probs=91.7
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs 120 (358)
|...|..++|++||.++ |+|+.|+.|.|||......+ +..| +..|.+++|+|- +++||+||
T Consensus 300 H~qeVCgLkws~d~~~l-ASGgnDN~~~Iwd~~~~~p~~~~~~H---------------~aAVKA~awcP~q~~lLAsGG 363 (484)
T KOG0305|consen 300 HRQEVCGLKWSPDGNQL-ASGGNDNVVFIWDGLSPEPKFTFTEH---------------TAAVKALAWCPWQSGLLATGG 363 (484)
T ss_pred ccceeeeeEECCCCCee-ccCCCccceEeccCCCccccEEEecc---------------ceeeeEeeeCCCccCceEEcC
Confidence 66789999999999987 67888999999999543322 2222 267999999994 77999986
Q ss_pred --CCCeEEEEeCCCCceeEEEeCCCCccccccCCCc--c-c--cc------------------cCCCc---eeeEEcCCC
Q psy2085 121 --IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEE--K-E--GK------------------ASSDE---SSEEEEEEE 172 (358)
Q Consensus 121 --~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~g--l-~--Gt------------------Rs~~P---~sI~fs~d~ 172 (358)
.|++|++||+.++.++..++.....-+..++... + . |. +..+. ..++++|||
T Consensus 364 Gs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg 443 (484)
T KOG0305|consen 364 GSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDG 443 (484)
T ss_pred CCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCC
Confidence 5999999999999999888765432111111111 0 0 22 11111 678888998
Q ss_pred CEEEE--ec-ceEEEECCC
Q psy2085 173 EEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 173 ~~llS--aD-~IKIWD~~t 188 (358)
..|++ +| ++|+|++-+
T Consensus 444 ~~i~t~a~DETlrfw~~f~ 462 (484)
T KOG0305|consen 444 ETIVTGAADETLRFWNLFD 462 (484)
T ss_pred CEEEEecccCcEEeccccC
Confidence 88886 67 999998753
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=8.5e-11 Score=117.95 Aligned_cols=113 Identities=12% Similarity=0.142 Sum_probs=79.3
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeC---CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEM---PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~---~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
-++.|.|.++..|+ ...|. ..+.|..-.. ...+.+|+|+|||..| |+|+.||.|.+|+.......
T Consensus 284 FlT~s~DgtlRiWdv~~~k~----------q~qVik~k~~~g~Rv~~tsC~~nrdg~~i-Aagc~DGSIQ~W~~~~~~v~ 352 (641)
T KOG0772|consen 284 FLTCSYDGTLRIWDVNNTKS----------QLQVIKTKPAGGKRVPVTSCAWNRDGKLI-AAGCLDGSIQIWDKGSRTVR 352 (641)
T ss_pred eEEecCCCcEEEEecCCchh----------heeEEeeccCCCcccCceeeecCCCcchh-hhcccCCceeeeecCCcccc
Confidence 36789999999999 54441 1223332222 1357899999999975 77889999999998654321
Q ss_pred eeeeccCceEEEEEeecCCC--CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeEEE
Q psy2085 82 FERCFDSEVVTFEILSDDYS--SELNSIAINPVHQLICVGTIEGKVEAWDPRMKV-KAGTL 139 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s--~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~-~i~~L 139 (358)
...+ + -+-|. ..|.||+||++++.|++=|.|+++++||+|.-+ ++.+.
T Consensus 353 p~~~----v------k~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~ 403 (641)
T KOG0772|consen 353 PVMK----V------KDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR 403 (641)
T ss_pred cceE----e------eeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh
Confidence 1111 0 01111 479999999999999999999999999999754 45443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=110.63 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=96.9
Q ss_pred eeEEEEe---eCCCCEeEEEEcCCC---CEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEE
Q psy2085 36 IELIQDF---EMPGVSTSVRISPDG---QYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAI 109 (358)
Q Consensus 36 Ieliqdf---e~~~~v~~v~~SpDG---~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~ 109 (358)
|.++|.+ ++++....++|+-|- .-++|.|++-|.|+|.|+.+... ..+.- + +...||.|.+
T Consensus 77 ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~--~~~~~---------g--hG~sINeik~ 143 (385)
T KOG1034|consen 77 IRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQC--SKNYR---------G--HGGSINEIKF 143 (385)
T ss_pred eeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhh--cccee---------c--cCccchhhhc
Confidence 4667766 477888999998763 33445556999999999986432 11110 1 1167999999
Q ss_pred cCC-CCEEEEEeCCCeEEEEeCCCCceeEEEe---CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceE
Q psy2085 110 NPV-HQLICVGTIEGKVEAWDPRMKVKAGTLD---CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQ 182 (358)
Q Consensus 110 np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~---~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IK 182 (358)
+|. .+|+.+||.|.+|++|++++..|+.++. +|-..| .+|.|+++|.+|+| +| ++|
T Consensus 144 ~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeV-----------------LSvD~~~~gd~i~ScGmDhslk 206 (385)
T KOG1034|consen 144 HPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEV-----------------LSVDFSLDGDRIASCGMDHSLK 206 (385)
T ss_pred CCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcE-----------------EEEEEcCCCCeeeccCCcceEE
Confidence 997 5799999999999999999999998875 455555 88999999999998 68 999
Q ss_pred EEECCCCc
Q psy2085 183 AWTKEIKK 190 (358)
Q Consensus 183 IWD~~tG~ 190 (358)
+|++...+
T Consensus 207 ~W~l~~~~ 214 (385)
T KOG1034|consen 207 LWRLNVKE 214 (385)
T ss_pred EEecChhH
Confidence 99998544
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=1e-09 Score=101.05 Aligned_cols=150 Identities=14% Similarity=0.160 Sum_probs=96.3
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC-------ceeeeeeccCceEEEEEeecCCC------
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL-------SMKFERCFDSEVVTFEILSDDYS------ 101 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l-------slk~~r~~d~e~v~f~~LS~D~s------ 101 (358)
.|-+-..-.|.+.|.|++|||+|+. +|||+.|..|++.-.+.. .|.|.-| |..+-+.+++.+.-+
T Consensus 79 ~v~~kr~khhkgsiyc~~ws~~gel-iatgsndk~ik~l~fn~dt~~~~g~dle~nmh-dgtirdl~fld~~~s~~~il~ 156 (350)
T KOG0641|consen 79 SVLCKRNKHHKGSIYCTAWSPCGEL-IATGSNDKTIKVLPFNADTCNATGHDLEFNMH-DGTIRDLAFLDDPESGGAILA 156 (350)
T ss_pred eEEeeeccccCccEEEEEecCccCe-EEecCCCceEEEEecccccccccCcceeeeec-CCceeeeEEecCCCcCceEEE
Confidence 3444444457799999999999995 589999999999877642 2223222 334445555533222
Q ss_pred ---------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe----------CCCC
Q psy2085 102 ---------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD----------CAFN 144 (358)
Q Consensus 102 ---------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~----------~~~~ 144 (358)
+-|.++ ++=++-++++|+.|.||++||+|...++.+++ .+..
T Consensus 157 s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessava 235 (350)
T KOG0641|consen 157 SAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVA 235 (350)
T ss_pred ecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeE
Confidence 333333 22345689999999999999999999887764 1222
Q ss_pred ccccc----cCCCc----------ccccc---CCCc-----eeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 145 CISNE----RDTEE----------KEGKA---SSDE-----SSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 145 ~v~~~----~~i~g----------l~GtR---s~~P-----~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.+..+ .-.+| +.|.| +-.| .++.|+|...++++ .| .||+=|++
T Consensus 236 av~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlq 303 (350)
T KOG0641|consen 236 AVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ 303 (350)
T ss_pred EEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecc
Confidence 22110 00111 11332 2223 88999999999996 68 99999987
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.1e-10 Score=114.46 Aligned_cols=149 Identities=19% Similarity=0.239 Sum_probs=100.2
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCce--EE-------EEEeecCCC---
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEV--VT-------FEILSDDYS--- 101 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~--v~-------f~~LS~D~s--- 101 (358)
++++.+. -.+.++++.|.+++++++|+ ++|+.+++|++.++.+. +..|.|. + ++ .+..|.|-+
T Consensus 210 ~~~~tLaGs~g~it~~d~d~~~~~~iAa-s~d~~~r~Wnvd~~r~~~TLsGHtdk-Vt~ak~~~~~~~vVsgs~DRtiK~ 287 (459)
T KOG0288|consen 210 ELISTLAGSLGNITSIDFDSDNKHVIAA-SNDKNLRLWNVDSLRLRHTLSGHTDK-VTAAKFKLSHSRVVSGSADRTIKL 287 (459)
T ss_pred hhhhhhhccCCCcceeeecCCCceEEee-cCCCceeeeeccchhhhhhhcccccc-eeeehhhccccceeeccccchhhh
Confidence 4555553 34679999999999999876 57899999999875432 2334331 1 11 112223322
Q ss_pred ---------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCcc----------
Q psy2085 102 ---------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEK---------- 155 (358)
Q Consensus 102 ---------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl---------- 155 (358)
+.+|.|+.+ ...+++|..|++|++||.|+..+..++.++.- +++ +.+.+|.
T Consensus 288 WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~-vtSl~ls~~g~~lLsssRDdt 364 (459)
T KOG0288|consen 288 WDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGR-VTSLDLSMDGLELLSSSRDDT 364 (459)
T ss_pred hhhhhhheeccccccccccceEec--ceeeeecccccceEEEeccCCceeeEeecCcc-eeeEeeccCCeEEeeecCCCc
Confidence 567777777 56899999999999999999998887776542 221 1111111
Q ss_pred ----c-------cc-cCC-----C-ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 156 ----E-------GK-ASS-----D-ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 156 ----~-------Gt-Rs~-----~-P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
. ++ +.. . -+.+.|||++.++++ +| .|+||++.+|+
T Consensus 365 l~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK 420 (459)
T KOG0288|consen 365 LKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK 420 (459)
T ss_pred eeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce
Confidence 0 11 111 0 188999999999994 89 99999999999
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-10 Score=111.55 Aligned_cols=188 Identities=15% Similarity=0.187 Sum_probs=124.9
Q ss_pred EEEEeecCCceeeee-eccCcccCCCccccc--ceeEEEEee-CCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCC
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRR--RIELIQDFE-MPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~--rIeliqdfe-~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~l 78 (358)
||=+-|--+.+-.|+ ....+.|-...-... .-+.|..|. |.+.-+.+.||| .|. ++||.-...|++|...+.
T Consensus 167 ~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~--LlsGDc~~~I~lw~~~~g 244 (440)
T KOG0302|consen 167 LCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR--LLSGDCVKGIHLWEPSTG 244 (440)
T ss_pred eeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc--cccCccccceEeeeeccC
Confidence 455555566688888 333333333322222 234566665 667789999999 564 457877789999998876
Q ss_pred ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCc---eeEEEeCCCCccccccCCCc
Q psy2085 79 SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKV---KAGTLDCAFNCISNERDTEE 154 (358)
Q Consensus 79 slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~---~i~~L~~~~~~v~~~~~i~g 154 (358)
+-++.... +.+ |+..|..++|||.+ ++|||||.||+|+|||+|++. ++.+ ..|.+.|
T Consensus 245 ~W~vd~~P--------f~g--H~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDV-------- 305 (440)
T KOG0302|consen 245 SWKVDQRP--------FTG--HTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDV-------- 305 (440)
T ss_pred ceeecCcc--------ccc--cccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEe-eccCCce--------
Confidence 54432110 111 44689999999974 699999999999999999983 3333 5566555
Q ss_pred cccccCCCceeeEEcCCCCEEEE-ec--ceEEEECCCCc------EE--ecCCCC--CccccccchhHHhhhccccceee
Q psy2085 155 KEGKASSDESSEEEEEEEEEEES-SD--DDQAWTKEIKK------TY--NLGPAP--KWCGFLDNLTEELEENIIENVYD 221 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~~tG~------~y--~lgpap--~Wcsfldnlteele~~~~~~vyd 221 (358)
+-|.|+....+|+| .| +++|||+++-+ +| .-+|.- .|...-+.+..--.++.+.++||
T Consensus 306 ---------NVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWD 376 (440)
T KOG0302|consen 306 ---------NVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWD 376 (440)
T ss_pred ---------eeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEE
Confidence 77999999888888 45 99999998744 34 333332 37665555544444456677777
Q ss_pred c
Q psy2085 222 D 222 (358)
Q Consensus 222 d 222 (358)
-
T Consensus 377 l 377 (440)
T KOG0302|consen 377 L 377 (440)
T ss_pred e
Confidence 4
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=8.3e-11 Score=112.42 Aligned_cols=172 Identities=11% Similarity=0.101 Sum_probs=116.4
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEE------cCC
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYE------TDN 77 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwD------l~~ 77 (358)
-|=+.|.|-++..|- |+.+ .|.+.-.|.+.||||+|+|.|.. +.|++.|++.+||. +.+
T Consensus 162 i~gtASADhTA~iWs~Esg~-------------CL~~Y~GH~GSVNsikfh~s~~L-~lTaSGD~taHIW~~av~~~vP~ 227 (481)
T KOG0300|consen 162 ICGTASADHTARIWSLESGA-------------CLATYTGHTGSVNSIKFHNSGLL-LLTASGDETAHIWKAAVNWEVPS 227 (481)
T ss_pred ceeecccccceeEEeecccc-------------ceeeecccccceeeEEeccccce-EEEccCCcchHHHHHhhcCcCCC
Confidence 366789999999999 7777 45555679999999999999974 57888899999998 332
Q ss_pred Cc----e----------eeeeecc------CceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy2085 78 LS----M----------KFERCFD------SEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 78 ls----l----------k~~r~~d------~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i 136 (358)
.. . +..+..| .+.+.....+ .++.+.|.++.|-..++.+++|+.|.|..+||+.++..+
T Consensus 228 ~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v 307 (481)
T KOG0300|consen 228 NNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVV 307 (481)
T ss_pred CCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccCcee
Confidence 10 0 0011111 0111111110 123367889999889999999999999999999999999
Q ss_pred EEEeCCCCcccccc-CCCc-cc-----cc-------cCCCc------------eeeEEcCCCCEEEEec--ceEEEECCC
Q psy2085 137 GTLDCAFNCISNER-DTEE-KE-----GK-------ASSDE------------SSEEEEEEEEEEESSD--DDQAWTKEI 188 (358)
Q Consensus 137 ~~L~~~~~~v~~~~-~i~g-l~-----Gt-------Rs~~P------------~sI~fs~d~~~llSaD--~IKIWD~~t 188 (358)
..|.+|.+..+.|. -++. +. .| |...| +++.|.-+.+.+-++| +|||||+++
T Consensus 308 ~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrN 387 (481)
T KOG0300|consen 308 NILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRN 387 (481)
T ss_pred ccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecc
Confidence 99999987665431 1111 10 11 21111 7888887655443466 999999987
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
.+
T Consensus 388 MR 389 (481)
T KOG0300|consen 388 MR 389 (481)
T ss_pred cc
Confidence 66
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-09 Score=101.74 Aligned_cols=130 Identities=10% Similarity=0.021 Sum_probs=89.2
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE-EEEeCCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI-CVGTIEG 123 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll-asGs~DG 123 (358)
+....++.|+|||++|++++..++.|++||+.+... .+..+... .-..+. ......++|+|++..+ ++.+.++
T Consensus 156 ~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~--~~~~~~~~---~~~~~~-~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 156 DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKV--IKKITFEI---PGVHPE-AVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCccee--eeeeeecc---cccccc-cCCccceEECCCCCEEEEEcCCCC
Confidence 344577899999999988877789999999986432 11111000 000000 0123468899999864 4445677
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc---EEecCC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK---TYNLGP 196 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~---~y~lgp 196 (358)
.|.+||+++++.+..+..+. .+ ..+.|+|+|+.|+++ + .|+|||..+++ ++.+|.
T Consensus 230 ~i~v~d~~~~~~~~~~~~~~-~~-----------------~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 291 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLLVGQ-RV-----------------WQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGR 291 (300)
T ss_pred eEEEEECCCCcEEEEEEeCC-Cc-----------------ceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEccc
Confidence 89999999988776654322 22 779999999998863 5 99999999988 347777
Q ss_pred CC
Q psy2085 197 AP 198 (358)
Q Consensus 197 ap 198 (358)
.|
T Consensus 292 ~~ 293 (300)
T TIGR03866 292 LP 293 (300)
T ss_pred cc
Confidence 77
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.6e-11 Score=115.94 Aligned_cols=135 Identities=12% Similarity=0.199 Sum_probs=102.7
Q ss_pred ceEEEEeecCCceeeee-e-----ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 3 VEYCYQTNWHKQAVTLV-I-----IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~-----~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
--|..+-|-|+.++.|+ . ...|-|. .|-.+||.|.|+. +|| +|++.|.+|++|++.
T Consensus 287 ng~mvtcSkDrsiaVWdm~sps~it~rrVLv---------------GHrAaVNvVdfd~--kyI-VsASgDRTikvW~~s 348 (499)
T KOG0281|consen 287 NGYMVTCSKDRSIAVWDMASPTDITLRRVLV---------------GHRAAVNVVDFDD--KYI-VSASGDRTIKVWSTS 348 (499)
T ss_pred CCEEEEecCCceeEEEeccCchHHHHHHHHh---------------hhhhheeeecccc--ceE-EEecCCceEEEEecc
Confidence 45778888899999998 1 2222222 3557899999964 577 456679999999998
Q ss_pred CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc
Q psy2085 77 NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE 156 (358)
Q Consensus 77 ~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~ 156 (358)
+. .|-|.+.++ ..+|-|+.+ .+.++++||+|.||++||+.+|.++..|.+|..-+
T Consensus 349 t~--efvRtl~gH-----------kRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLv---------- 403 (499)
T KOG0281|consen 349 TC--EFVRTLNGH-----------KRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV---------- 403 (499)
T ss_pred ce--eeehhhhcc-----------cccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhh----------
Confidence 63 344444322 246666655 36899999999999999999999999999998877
Q ss_pred cccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 157 GKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 157 GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
..|-|.. ..|+| .| +|||||+.++
T Consensus 404 -------RciRFd~--krIVSGaYDGkikvWdl~aa 430 (499)
T KOG0281|consen 404 -------RCIRFDN--KRIVSGAYDGKIKVWDLQAA 430 (499)
T ss_pred -------hheeecC--ceeeeccccceEEEEecccc
Confidence 7789964 56887 58 9999999875
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.2e-10 Score=121.01 Aligned_cols=136 Identities=22% Similarity=0.257 Sum_probs=108.0
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC---C--------CceeeeeeccCc-eEEEEEeecCCC-
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD---N--------LSMKFERCFDSE-VVTFEILSDDYS- 101 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~---~--------lslk~~r~~d~e-~v~f~~LS~D~s- 101 (358)
-+|.|+ -|.+++.+++.+|||+.. +||+.|.+|++||.. . ++++..|.++-+ .+-+...|||..
T Consensus 446 l~Eti~--AHdgaIWsi~~~pD~~g~-vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~ 522 (888)
T KOG0306|consen 446 LVETIR--AHDGAIWSISLSPDNKGF-VTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKL 522 (888)
T ss_pred hhhhhh--ccccceeeeeecCCCCce-EEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcE
Confidence 345555 488999999999999986 678889999999964 1 233333444322 244455677754
Q ss_pred ----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCC
Q psy2085 102 ----------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTE 153 (358)
Q Consensus 102 ----------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~ 153 (358)
-+|.|++++|++.+++|||.|..|++|-+.=|.|-.++-+|.+++
T Consensus 523 LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSv------- 595 (888)
T KOG0306|consen 523 LAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSV------- 595 (888)
T ss_pred EEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCce-------
Confidence 579999999999999999999999999999999989999998887
Q ss_pred ccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+++.|.|....++|+ | .||-||.+.-+
T Consensus 596 ----------m~V~F~P~~~~FFt~gKD~kvKqWDg~kFe 625 (888)
T KOG0306|consen 596 ----------MSVQFLPKTHLFFTCGKDGKVKQWDGEKFE 625 (888)
T ss_pred ----------eEEEEcccceeEEEecCcceEEeechhhhh
Confidence 889999988888875 6 99999987544
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.2e-10 Score=112.58 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=97.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCC--CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMP--GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~--~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
|..+-+-+.-+.+|+-..+ ++.+.|+.. -.+.+++|-|||..+ ++|+.|++|--||+...-+.
T Consensus 283 yLlaCg~~e~~~lwDv~tg-------------d~~~~y~~~~~~S~~sc~W~pDg~~~-V~Gs~dr~i~~wdlDgn~~~~ 348 (519)
T KOG0293|consen 283 YLLACGFDEVLSLWDVDTG-------------DLRHLYPSGLGFSVSSCAWCPDGFRF-VTGSPDRTIIMWDLDGNILGN 348 (519)
T ss_pred eEEecCchHheeeccCCcc-------------hhhhhcccCcCCCcceeEEccCCcee-EecCCCCcEEEecCCcchhhc
Confidence 4555555556667773222 334444433 568899999999985 68889999999999753221
Q ss_pred eeeeccCceEEEEEeecCCC----------------------------CC------------------------------
Q psy2085 82 FERCFDSEVVTFEILSDDYS----------------------------SE------------------------------ 103 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s----------------------------~~------------------------------ 103 (358)
++..-+..+++.. +++|.. .+
T Consensus 349 W~gvr~~~v~dla-it~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~ 427 (519)
T KOG0293|consen 349 WEGVRDPKVHDLA-ITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN 427 (519)
T ss_pred ccccccceeEEEE-EcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh
Confidence 1111111122221 112211 12
Q ss_pred --------------eeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEE
Q psy2085 104 --------------LNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE 168 (358)
Q Consensus 104 --------------In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f 168 (358)
|-.-||-- +..++|+||+|+.|.||+-++++++.+|.+|...+ +.|+|
T Consensus 428 ~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~v-----------------NcVsw 490 (519)
T KOG0293|consen 428 KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTV-----------------NCVSW 490 (519)
T ss_pred hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCccee-----------------eEEec
Confidence 22223322 33578999999999999999999999999998776 88999
Q ss_pred cCCCCE-EEE-ec--ceEEEECC
Q psy2085 169 EEEEEE-EES-SD--DDQAWTKE 187 (358)
Q Consensus 169 s~d~~~-llS-aD--~IKIWD~~ 187 (358)
+|.... ++| +| +||||-..
T Consensus 491 NP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 491 NPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred CCCCHHHhhccCCCCeEEEecCC
Confidence 997764 556 45 99999765
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.4e-10 Score=109.08 Aligned_cols=124 Identities=16% Similarity=0.235 Sum_probs=99.2
Q ss_pred cceeEEEEeeCC---CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMP---GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~---~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..-+|.+.|-|+ +++++++++ |.|+ |+|+.|-+|+|||+..... + -.++++ ++.||++.|.
T Consensus 29 ~~~~l~~lF~~~aH~~sitavAVs--~~~~-aSGssDetI~IYDm~k~~q-----l------g~ll~H--agsitaL~F~ 92 (362)
T KOG0294|consen 29 VKPTLKPLFAFSAHAGSITALAVS--GPYV-ASGSSDETIHIYDMRKRKQ-----L------GILLSH--AGSITALKFY 92 (362)
T ss_pred cceeeeccccccccccceeEEEec--ceeE-eccCCCCcEEEEeccchhh-----h------cceecc--ccceEEEEec
Confidence 345677777654 688899885 7887 6777788999999975311 0 012222 3789999998
Q ss_pred CCCC--EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 111 PVHQ--LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 111 p~~~--llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
+.-. .|.+|++||.|-+||..+=.++.++.+|...| +.|+.||.|.+-+| .| .++.||
T Consensus 93 ~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~V-----------------t~lsiHPS~KLALsVg~D~~lr~WN 155 (362)
T KOG0294|consen 93 PPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQV-----------------TDLSIHPSGKLALSVGGDQVLRTWN 155 (362)
T ss_pred CCcchhheeeecCCCcEEEEEcCCeEEeeeeccccccc-----------------ceeEecCCCceEEEEcCCceeeeeh
Confidence 8764 78899999999999999889999999998777 78999999998887 57 999999
Q ss_pred CCCCc
Q psy2085 186 KEIKK 190 (358)
Q Consensus 186 ~~tG~ 190 (358)
+-+|+
T Consensus 156 LV~Gr 160 (362)
T KOG0294|consen 156 LVRGR 160 (362)
T ss_pred hhcCc
Confidence 99998
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.8e-10 Score=117.44 Aligned_cols=132 Identities=15% Similarity=0.125 Sum_probs=104.3
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
..|+|||++|..|. ...+-.|.. |+.+|..|++-|.+.| .||+.|.+||+|.=.+.-..|..
T Consensus 115 ~iSgSWD~TakvW~~~~l~~~l~g---------------H~asVWAv~~l~e~~~--vTgsaDKtIklWk~~~~l~tf~g 177 (745)
T KOG0301|consen 115 LISGSWDSTAKVWRIGELVYSLQG---------------HTASVWAVASLPENTY--VTGSADKTIKLWKGGTLLKTFSG 177 (745)
T ss_pred eEecccccceEEecchhhhcccCC---------------cchheeeeeecCCCcE--EeccCcceeeeccCCchhhhhcc
Confidence 47999999999999 555544333 6678999999999965 48888999999987654334555
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
|. +.|..+++-|++. |+|++.||.|++||+ ++.++....+|.+-+ .
T Consensus 178 Ht---------------D~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~v-----------------Y 223 (745)
T KOG0301|consen 178 HT---------------DCVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFV-----------------Y 223 (745)
T ss_pred ch---------------hheeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEE-----------------E
Confidence 55 4688999988764 556799999999999 899999999998776 7
Q ss_pred eeEEcCCCCEEEEe--c-ceEEEECCC
Q psy2085 165 SEEEEEEEEEEESS--D-DDQAWTKEI 188 (358)
Q Consensus 165 sI~fs~d~~~llSa--D-~IKIWD~~t 188 (358)
+|+..++++.|+|+ | +++||+...
T Consensus 224 sis~~~~~~~Ivs~gEDrtlriW~~~e 250 (745)
T KOG0301|consen 224 SISMALSDGLIVSTGEDRTLRIWKKDE 250 (745)
T ss_pred EEEecCCCCeEEEecCCceEEEeecCc
Confidence 78866666777874 6 999999863
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.7e-10 Score=108.69 Aligned_cols=139 Identities=19% Similarity=0.133 Sum_probs=105.1
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
..|+|.|+++.+|+ ...+ +-+.+. |...|++++|.|.--.++.+|+||++|+++|.+..+..
T Consensus 259 LaSgsaD~TV~lWD~~~g~--------------p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s-- 322 (463)
T KOG0270|consen 259 LASGSADKTVKLWDVDTGK--------------PKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNS-- 322 (463)
T ss_pred EEecCCCceEEEEEcCCCC--------------cceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCcccc--
Confidence 46899999999999 3222 222333 55789999999976666689999999999999853210
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCC
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.....| .+.|-.++|+|... .+.+|++||+|+-+|+|+. +++-++..|..+|
T Consensus 323 ----~~~wk~-------~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~I--------------- 376 (463)
T KOG0270|consen 323 ----GKEWKF-------DGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEI--------------- 376 (463)
T ss_pred ----CceEEe-------ccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCc---------------
Confidence 000111 16789999999754 6777889999999999986 8899999999887
Q ss_pred CceeeEEcCCCCEEEE---ec-ceEEEECCC
Q psy2085 162 DESSEEEEEEEEEEES---SD-DDQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS---aD-~IKIWD~~t 188 (358)
..|.+++.-..+++ +| +||+|++..
T Consensus 377 --Sgl~~n~~~p~~l~t~s~d~~Vklw~~~~ 405 (463)
T KOG0270|consen 377 --SGLSVNIQTPGLLSTASTDKVVKLWKFDV 405 (463)
T ss_pred --ceEEecCCCCcceeeccccceEEEEeecC
Confidence 67888877665553 67 999999864
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.6e-11 Score=122.44 Aligned_cols=118 Identities=14% Similarity=0.239 Sum_probs=96.9
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
..|...|.||.|+++.. |+++|+.+|+||+||+.+. |.-|.+-+ +...+.+|+|+|-+.++|+|+.
T Consensus 67 ~~hespIeSl~f~~~E~-LlaagsasgtiK~wDleeA--k~vrtLtg-----------h~~~~~sv~f~P~~~~~a~gSt 132 (825)
T KOG0267|consen 67 TGHESPIESLTFDTSER-LLAAGSASGTIKVWDLEEA--KIVRTLTG-----------HLLNITSVDFHPYGEFFASGST 132 (825)
T ss_pred eccCCcceeeecCcchh-hhcccccCCceeeeehhhh--hhhhhhhc-----------cccCcceeeeccceEEeccccc
Confidence 35788999999999986 5588899999999999853 21121111 1145788999999999999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG~ 190 (358)
|+-.++||.|...|+....+|...+ ..+.|+|+|.++++ . | +++|||..-|+
T Consensus 133 dtd~~iwD~Rk~Gc~~~~~s~~~vv-----------------~~l~lsP~Gr~v~~g~ed~tvki~d~~agk 187 (825)
T KOG0267|consen 133 DTDLKIWDIRKKGCSHTYKSHTRVV-----------------DVLRLSPDGRWVASGGEDNTVKIWDLTAGK 187 (825)
T ss_pred cccceehhhhccCceeeecCCccee-----------------EEEeecCCCceeeccCCcceeeeecccccc
Confidence 9999999999999999999877766 77999999999998 3 5 99999997776
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.7e-10 Score=113.16 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=102.5
Q ss_pred ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEEEEeec
Q psy2085 21 IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTFEILSD 98 (358)
Q Consensus 21 ~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f~~LS~ 98 (358)
+.+|.+-+-.++.+..+..|.+--|+.+.|+.-+|+|.||++ |+.++.|.||.+.+..|- +.+|.
T Consensus 57 q~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~a-g~i~g~lYlWelssG~LL~v~~aHY------------ 123 (476)
T KOG0646|consen 57 QLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLA-GTISGNLYLWELSSGILLNVLSAHY------------ 123 (476)
T ss_pred cccCccccccccCchhhhhhhcccccceeeeecCCCceEEEe-ecccCcEEEEEeccccHHHHHHhhc------------
Confidence 455555555566666666688889999999999999999865 567899999999986542 23332
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC---------CCceeEEEeCCCCccccccCCCccccccCCCceeeE--
Q psy2085 99 DYSSELNSIAINPVHQLICVGTIEGKVEAWDPR---------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE-- 167 (358)
Q Consensus 99 D~s~~In~i~~np~~~llasGs~DGtV~iWD~R---------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~-- 167 (358)
..|+|+.|+-++.+|+|||.||.|.+|++- +-.+...+..|.-+| +++.
T Consensus 124 ---Q~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsI-----------------TDl~ig 183 (476)
T KOG0646|consen 124 ---QSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSI-----------------TDLQIG 183 (476)
T ss_pred ---cceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCccee-----------------EEEEec
Confidence 579999999999999999999999999762 223455566665555 3344
Q ss_pred EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 168 EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 168 fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+...+|+| .| +||+||+..|.
T Consensus 184 ~Gg~~~rl~TaS~D~t~k~wdlS~g~ 209 (476)
T KOG0646|consen 184 SGGTNARLYTASEDRTIKLWDLSLGV 209 (476)
T ss_pred CCCccceEEEecCCceEEEEEeccce
Confidence 3434467776 68 99999999988
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.3e-10 Score=105.71 Aligned_cols=125 Identities=18% Similarity=0.243 Sum_probs=88.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec----cCceEEEEEeecCCC------------------
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF----DSEVVTFEILSDDYS------------------ 101 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~----d~e~v~f~~LS~D~s------------------ 101 (358)
|...|++++||.||++| ||++.|+.|+||++....++-.|++ ....-+.+.++||-.
T Consensus 85 H~~~vt~~~FsSdGK~l-at~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~ 163 (420)
T KOG2096|consen 85 HKKEVTDVAFSSDGKKL-ATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLV 163 (420)
T ss_pred cCCceeeeEEcCCCcee-EEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEee
Confidence 56789999999999998 6777899999999986543322221 111111222333311
Q ss_pred ----------------------C--CeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccc
Q psy2085 102 ----------------------S--ELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 102 ----------------------~--~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
. .|-.+.+...+.+|++++.|-+|.+||++ |+.+++++......
T Consensus 164 K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n----------- 231 (420)
T KOG2096|consen 164 KKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSN----------- 231 (420)
T ss_pred ecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccccccc-----------
Confidence 2 23334555566799999999999999998 88888888654332
Q ss_pred ccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 158 KASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
+..+.||+|++|+++- -||+|..-
T Consensus 232 ------~~aavSP~GRFia~~gFTpDVkVwE~~ 258 (420)
T KOG2096|consen 232 ------YDAAVSPDGRFIAVSGFTPDVKVWEPI 258 (420)
T ss_pred ------cceeeCCCCcEEEEecCCCCceEEEEE
Confidence 5678899999999865 89999984
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.11 E-value=3.8e-10 Score=117.61 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=92.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV 125 (358)
.++.|+|..--..++||++..|.|-|||++.. .|..- ...| ..|+..||+++||+.+ .+|++||.||+|
T Consensus 89 S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~----~rnk~--l~~f----~EH~Rs~~~ldfh~tep~iliSGSQDg~v 158 (839)
T KOG0269|consen 89 SAADVKWGQLYSNLIATCSTNGVISVWDLNKS----IRNKL--LTVF----NEHERSANKLDFHSTEPNILISGSQDGTV 158 (839)
T ss_pred ehhhcccccchhhhheeecCCCcEEEEecCcc----ccchh--hhHh----hhhccceeeeeeccCCccEEEecCCCceE
Confidence 46788888754556688888999999999852 11100 0000 1122579999999975 599999999999
Q ss_pred EEEeCCCCceeEEEeCCCCccc-cccCCC-c-----cc--cc------cC-----------CCc-eeeEEcCCCCEEEEe
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCIS-NERDTE-E-----KE--GK------AS-----------SDE-SSEEEEEEEEEEESS 178 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~-~~~~i~-g-----l~--Gt------Rs-----------~~P-~sI~fs~d~~~llSa 178 (358)
++||+|+.....+..+...++- ..|++. + +. |. |. ..| ..+.|||++.+|+|.
T Consensus 159 K~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATG 238 (839)
T KOG0269|consen 159 KCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATG 238 (839)
T ss_pred EEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeec
Confidence 9999999998887776544431 112221 0 00 44 22 233 889999999999984
Q ss_pred --c-ceEEEECCCCc
Q psy2085 179 --D-DDQAWTKEIKK 190 (358)
Q Consensus 179 --D-~IKIWD~~tG~ 190 (358)
| .|||||..+++
T Consensus 239 GRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 239 GRDKMVKIWDMTDSR 253 (839)
T ss_pred CCCccEEEEeccCCC
Confidence 7 99999998766
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.09 E-value=9.8e-11 Score=121.20 Aligned_cols=137 Identities=15% Similarity=0.111 Sum_probs=107.5
Q ss_pred EeecCCceeeee-e--ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 8 QTNWHKQAVTLV-I--IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 8 ~~~~~~~~~~~~-~--~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.++.++++..|+ + +-+|-| +.|-..+.+|.|+|-|.|. |+|+-|.-+++||+......+.+
T Consensus 87 agsasgtiK~wDleeAk~vrtL---------------tgh~~~~~sv~f~P~~~~~-a~gStdtd~~iwD~Rk~Gc~~~~ 150 (825)
T KOG0267|consen 87 AGSASGTIKVWDLEEAKIVRTL---------------TGHLLNITSVDFHPYGEFF-ASGSTDTDLKIWDIRKKGCSHTY 150 (825)
T ss_pred ccccCCceeeeehhhhhhhhhh---------------hccccCcceeeeccceEEe-ccccccccceehhhhccCceeee
Confidence 357788999999 4 333322 3455668899999999987 78999999999999854332221
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
. .++..|+++.|+|+|.++++|++|.+|++||.+.|+.+..+..|...+ .
T Consensus 151 ~-------------s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v-----------------~ 200 (825)
T KOG0267|consen 151 K-------------SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKV-----------------Q 200 (825)
T ss_pred c-------------CCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccc-----------------c
Confidence 1 122679999999999999999999999999999999999999887665 7
Q ss_pred eeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 165 SEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 165 sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++.|||..-.+.+ +| +|++||+++-.
T Consensus 201 sle~hp~e~Lla~Gs~d~tv~f~dletfe 229 (825)
T KOG0267|consen 201 SLEFHPLEVLLAPGSSDRTVRFWDLETFE 229 (825)
T ss_pred ccccCchhhhhccCCCCceeeeeccceeE
Confidence 7899997655553 78 99999998643
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=4.1e-09 Score=108.69 Aligned_cols=147 Identities=14% Similarity=0.173 Sum_probs=108.6
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.||++..+.+..|+ ...++.-..|. +.+++.+++.+|-+..+ +.|+.+|.+..++.....+.+.|
T Consensus 83 LFS~g~sg~i~EwDl~~lk~~~~~d~-------------~gg~IWsiai~p~~~~l-~IgcddGvl~~~s~~p~~I~~~r 148 (691)
T KOG2048|consen 83 LFSSGLSGSITEWDLHTLKQKYNIDS-------------NGGAIWSIAINPENTIL-AIGCDDGVLYDFSIGPDKITYKR 148 (691)
T ss_pred EEeecCCceEEEEecccCceeEEecC-------------CCcceeEEEeCCccceE-EeecCCceEEEEecCCceEEEEe
Confidence 37888889999999 55553222222 56789999999999755 67889998888888776666766
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc-
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE- 163 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P- 163 (358)
.++-.. +.|.+++|+|++.-|++|+.||.|++||..+++.+..+....... +...|
T Consensus 149 ~l~rq~-----------sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l------------~k~~~~ 205 (691)
T KOG2048|consen 149 SLMRQK-----------SRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRL------------SKREPT 205 (691)
T ss_pred eccccc-----------ceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeeccccc------------ccCCce
Confidence 654321 679999999999999999999999999999998877443222111 00011
Q ss_pred --eeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 164 --SSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 164 --~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
-+|.|-.++ .|+|.| +|++||...|.
T Consensus 206 iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~~gT 236 (691)
T KOG2048|consen 206 IVWSVLFLRDS-TIASGDSAGTVTFWDSIFGT 236 (691)
T ss_pred EEEEEEEeecC-cEEEecCCceEEEEcccCcc
Confidence 456666554 688888 99999999988
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.7e-10 Score=119.12 Aligned_cols=124 Identities=16% Similarity=0.174 Sum_probs=90.5
Q ss_pred CEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCc-eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLS-MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~ls-lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
.|.+|.++|||.. +|||+ +|+.++||.....- -+.++... .-.....-.+|.+.|||+.|+|+|++||+||+|+
T Consensus 15 ~IfSIdv~pdg~~-~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~--l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 15 SIFSIDVHPDGVK-FATGGQVLDGGIVIWSQDPVLDEKEEKNEN--LPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred eEEEEEecCCcee-EecCCccccccceeeccccccchhhhhhcc--cchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 4889999999986 47888 89999999976421 11111111 1111122345668999999999999999999999
Q ss_pred eEEEEeCCC-------Cc-----------eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceE
Q psy2085 124 KVEAWDPRM-------KV-----------KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQ 182 (358)
Q Consensus 124 tV~iWD~Rs-------~~-----------~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IK 182 (358)
.|.+|+-.. +. ++.+|.+|...| ..|.|+|++.+|+| .| +|.
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV-----------------~Dv~Wsp~~~~lvS~s~DnsVi 154 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDV-----------------LDVNWSPDDSLLVSVSLDNSVI 154 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCcc-----------------ceeccCCCccEEEEecccceEE
Confidence 999999652 01 234455555444 78999999999997 68 999
Q ss_pred EEECCCCc
Q psy2085 183 AWTKEIKK 190 (358)
Q Consensus 183 IWD~~tG~ 190 (358)
|||..+.+
T Consensus 155 iwn~~tF~ 162 (942)
T KOG0973|consen 155 IWNAKTFE 162 (942)
T ss_pred EEccccce
Confidence 99999876
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.5e-08 Score=95.18 Aligned_cols=140 Identities=14% Similarity=0.069 Sum_probs=109.5
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
.||.+-|..+-.|-.-.+ |.|-.++ |.++|.||.+.-+.+++ .||+.|.++++||+.+......-
T Consensus 25 lFscaKD~~~~vw~s~nG-------------erlGty~GHtGavW~~Did~~s~~l-iTGSAD~t~kLWDv~tGk~la~~ 90 (327)
T KOG0643|consen 25 LFSCAKDSTPTVWYSLNG-------------ERLGTYDGHTGAVWCCDIDWDSKHL-ITGSADQTAKLWDVETGKQLATW 90 (327)
T ss_pred EEEecCCCCceEEEecCC-------------ceeeeecCCCceEEEEEecCCccee-eeccccceeEEEEcCCCcEEEEe
Confidence 678888888888874222 3455564 89999999999999987 58999999999999986543221
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-----CCeEEEEeCC-------CCceeEEEeCCCCccccccCC
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-----EGKVEAWDPR-------MKVKAGTLDCAFNCISNERDT 152 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-----DGtV~iWD~R-------s~~~i~~L~~~~~~v~~~~~i 152 (358)
... ..|..|.|++.+++++..++ -+.|.++|+| +..+...+..+.+.+
T Consensus 91 k~~--------------~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~ski------ 150 (327)
T KOG0643|consen 91 KTN--------------SPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKI------ 150 (327)
T ss_pred ecC--------------CeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccce------
Confidence 111 56899999999998877765 4789999999 455667776666554
Q ss_pred CccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
++.-|.|-++.|++. | .|.+||.++|.
T Consensus 151 -----------t~a~Wg~l~~~ii~Ghe~G~is~~da~~g~ 180 (327)
T KOG0643|consen 151 -----------TSALWGPLGETIIAGHEDGSISIYDARTGK 180 (327)
T ss_pred -----------eeeeecccCCEEEEecCCCcEEEEEcccCc
Confidence 788999999999985 4 99999999996
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=2.1e-09 Score=105.43 Aligned_cols=126 Identities=16% Similarity=0.102 Sum_probs=90.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+++.+.++.|.+++.-.+|||+-|..|+||-++...-. .....|.+..-=..|+..||+|-|+|++.+||||+++|
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~----~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g 87 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPG----GGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGG 87 (434)
T ss_pred CCCceEEEEeccCcccceecccCccceeeeeeeecCCC----CCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCc
Confidence 56779999999988745678888999999998642110 00022333221133447899999999999999999999
Q ss_pred eEEEEeCCC-------------C---ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEE
Q psy2085 124 KVEAWDPRM-------------K---VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAW 184 (358)
Q Consensus 124 tV~iWD~Rs-------------~---~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIW 184 (358)
.|-+|-... + ....++.+|...+ ..++|+|++..+++ .| ++++|
T Consensus 88 ~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~di-----------------ydL~Ws~d~~~l~s~s~dns~~l~ 150 (434)
T KOG1009|consen 88 EVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDI-----------------YDLAWSPDSNFLVSGSVDNSVRLW 150 (434)
T ss_pred eEEEEEecCcCCccccchhhhCccceEEEEEecccccch-----------------hhhhccCCCceeeeeeccceEEEE
Confidence 999997652 0 0112333333333 78999999999986 68 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
|+..|.
T Consensus 151 Dv~~G~ 156 (434)
T KOG1009|consen 151 DVHAGQ 156 (434)
T ss_pred Eeccce
Confidence 999988
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.8e-09 Score=107.20 Aligned_cols=68 Identities=18% Similarity=0.285 Sum_probs=53.7
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce-----eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 102 SELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVK-----AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 102 ~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~-----i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
..|++|++||.+. +|||||.|+|++|||+|.-.. +.++ .|..+| ++..|||++..|
T Consensus 323 kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~-~HrrsV-----------------~sAyFSPs~gtl 384 (498)
T KOG4328|consen 323 KKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTL-PHRRSV-----------------NSAYFSPSGGTL 384 (498)
T ss_pred cccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecc-ccccee-----------------eeeEEcCCCCce
Confidence 5799999999865 899999999999999986332 2222 244454 789999998888
Q ss_pred EE--ec-ceEEEECC
Q psy2085 176 ES--SD-DDQAWTKE 187 (358)
Q Consensus 176 lS--aD-~IKIWD~~ 187 (358)
++ .| .|+|||..
T Consensus 385 ~TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 385 LTTCQDNEIRVFDSS 399 (498)
T ss_pred EeeccCCceEEeecc
Confidence 86 67 99999984
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.04 E-value=3.9e-10 Score=107.77 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=70.7
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-c
Q psy2085 104 LNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 104 In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~ 180 (358)
.+||.||+-|.+||+|+.||.|-|||+.|+.....|.+|..++ .+|+||++|++|+| .| .
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi-----------------~sl~WS~dgr~LltsS~D~s 88 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPI-----------------TSLCWSRDGRKLLTSSRDWS 88 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccce-----------------eEEEecCCCCEeeeecCCce
Confidence 6899999999999999999999999999999888999999888 88999999999996 58 9
Q ss_pred eEEEECCCCcE-E--ecCCCCCc
Q psy2085 181 DQAWTKEIKKT-Y--NLGPAPKW 200 (358)
Q Consensus 181 IKIWD~~tG~~-y--~lgpap~W 200 (358)
|++||+..|.. + -| ++|.|
T Consensus 89 i~lwDl~~gs~l~rirf-~spv~ 110 (405)
T KOG1273|consen 89 IKLWDLLKGSPLKRIRF-DSPVW 110 (405)
T ss_pred eEEEeccCCCceeEEEc-cCccc
Confidence 99999999982 1 33 66776
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=6.7e-10 Score=119.77 Aligned_cols=174 Identities=14% Similarity=0.166 Sum_probs=111.7
Q ss_pred ecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC
Q psy2085 10 NWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS 88 (358)
Q Consensus 10 ~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~ 88 (358)
.-|+++..|+..+- +++ ..+++|..+. |.+.|..+.|+|.+..++|+|+.+|.|-|||++++...+.-.
T Consensus 87 ~edG~I~ly~p~~~--~~~-----~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~--- 156 (1049)
T KOG0307|consen 87 LEDGNIVLYDPASI--IAN-----ASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG--- 156 (1049)
T ss_pred ccCCceEEecchhh--ccC-----cchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC---
Confidence 34667888883222 122 2346777774 899999999999998888999999999999999754333221
Q ss_pred ceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEe-----CCCCcccc----------ccCC
Q psy2085 89 EVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLD-----CAFNCISN----------ERDT 152 (358)
Q Consensus 89 e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~-----~~~~~v~~----------~~~i 152 (358)
+..-.+.|.+++||.. ..+||+|+.+|.+-|||+|.++++-.+. ++.+.+.. +..-
T Consensus 157 --------~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d 228 (1049)
T KOG0307|consen 157 --------SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD 228 (1049)
T ss_pred --------CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence 1111157888999875 4588888989999999998886642221 22222110 0011
Q ss_pred Cccc----cc-c----------CC-C-ceeeEEcCCC-CEEEE--ec-ceEEEECCCCcEE-ecCCCCCcc
Q psy2085 153 EEKE----GK-A----------SS-D-ESSEEEEEEE-EEEES--SD-DDQAWTKEIKKTY-NLGPAPKWC 201 (358)
Q Consensus 153 ~gl~----Gt-R----------s~-~-P~sI~fs~d~-~~llS--aD-~IKIWD~~tG~~y-~lgpap~Wc 201 (358)
+... .. | .+ + ..++.|++.. ++|+| .| .|-+|+.+||+.. .|+....||
T Consensus 229 d~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~ 299 (1049)
T KOG0307|consen 229 DSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWC 299 (1049)
T ss_pred CCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcce
Confidence 1110 00 1 11 1 1889999977 67777 47 9999999999833 554444454
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.4e-09 Score=98.43 Aligned_cols=143 Identities=15% Similarity=0.178 Sum_probs=98.2
Q ss_pred EeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 8 QTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 8 ~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.|+|+++.-.. ++..- ..++.++ .|.+.|..+.|.. -|. |+|+++||++|-||.-.+. .+.
T Consensus 28 TcsSD~tVkIf~v~~n~~-----------s~ll~~L~Gh~GPVwqv~wahPk~G~-iLAScsYDgkVIiWke~~g--~w~ 93 (299)
T KOG1332|consen 28 TCSSDGTVKIFEVRNNGQ-----------SKLLAELTGHSGPVWKVAWAHPKFGT-ILASCSYDGKVIIWKEENG--RWT 93 (299)
T ss_pred eecCCccEEEEEEcCCCC-----------ceeeeEecCCCCCeeEEeecccccCc-EeeEeecCceEEEEecCCC--chh
Confidence 456777766655 33321 2456666 4899999999987 787 4588999999999997654 222
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCC-c-ee-EEEeCCCCccccccCCCccccc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMK-V-KA-GTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~-~-~i-~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.... + .++...||+|+|.|. +-+||+|++||.|.+.+.++. . .. ....+|.-.+
T Consensus 94 k~~e-----~----~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gv------------ 152 (299)
T KOG1332|consen 94 KAYE-----H----AAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGV------------ 152 (299)
T ss_pred hhhh-----h----hhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhcccccc------------
Confidence 1110 0 122378999999996 458999999999999988765 1 11 2223444333
Q ss_pred cCCCceeeEEcCC---C-----------CEEEE--ec-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEE---E-----------EEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d---~-----------~~llS--aD-~IKIWD~~tG~ 190 (358)
+++.|.|. | .+|+| +| .||||+..++.
T Consensus 153 -----nsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~ 196 (299)
T KOG1332|consen 153 -----NSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS 196 (299)
T ss_pred -----ceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc
Confidence 66777764 3 45777 78 99999999875
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.8e-09 Score=107.38 Aligned_cols=130 Identities=19% Similarity=0.213 Sum_probs=100.6
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
-.|.|++|.|++++.|+-+.+ .||-.+-||.++.+|.+.|-++.+. .|+.+|.|-+.++.+++..-
T Consensus 188 ~~rl~TaS~D~t~k~wdlS~g-------------~LLlti~fp~si~av~lDpae~~~y-iGt~~G~I~~~~~~~~~~~~ 253 (476)
T KOG0646|consen 188 NARLYTASEDRTIKLWDLSLG-------------VLLLTITFPSSIKAVALDPAERVVY-IGTEEGKIFQNLLFKLSGQS 253 (476)
T ss_pred cceEEEecCCceEEEEEeccc-------------eeeEEEecCCcceeEEEcccccEEE-ecCCcceEEeeehhcCCccc
Confidence 468999999999999996555 7999999999999999999998664 57889999999887654211
Q ss_pred ----eeeccCceEEEEEe-ecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 83 ----ERCFDSEVVTFEIL-SDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 83 ----~r~~d~e~v~f~~L-S~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
.+..+.+...+..+ +.-+...|+|+++|-++.+|++|+.||.|.+||+-+++++.++....++|
T Consensus 254 ~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpV 322 (476)
T KOG0646|consen 254 AGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPV 322 (476)
T ss_pred ccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhcccc
Confidence 12222233333222 12222489999999999999999999999999999999999887545555
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=7.6e-09 Score=102.80 Aligned_cols=175 Identities=18% Similarity=0.192 Sum_probs=105.8
Q ss_pred eEEEEeecCCceeeee-eccC--ccc-CCCcccc--cceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGG--RYL-LPTNDIR--RRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~--r~l-k~d~~~~--~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
.|.|++|-+.++..|. .+.+ |-. +.+ +.- ..+++--.- .|...+.++++||||+|| |||+-++.|.|||..
T Consensus 155 ~~~fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyl-atgg~d~~v~Iw~~~ 232 (479)
T KOG0299|consen 155 KRVFSASKDGTILKWDVLTGKKDRYIIERD-EVLKSHGNPLKESRKGHVKEILTLAVSSDGKYL-ATGGRDRHVQIWDCD 232 (479)
T ss_pred cceeecCCCcceeeeehhcCcccccccccc-hhhhhccCCCCcccccccceeEEEEEcCCCcEE-EecCCCceEEEecCc
Confidence 5899999999999999 3222 111 221 111 111111111 466779999999999998 677889999999998
Q ss_pred CCce-e-eeeeccCceEEEE---------EeecCCC--------------------------------------------
Q psy2085 77 NLSM-K-FERCFDSEVVTFE---------ILSDDYS-------------------------------------------- 101 (358)
Q Consensus 77 ~lsl-k-~~r~~d~e~v~f~---------~LS~D~s-------------------------------------------- 101 (358)
++.- + |..|- ..++..+ ..|.|.+
T Consensus 233 t~ehv~~~~ghr-~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~r 311 (479)
T KOG0299|consen 233 TLEHVKVFKGHR-GAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVR 311 (479)
T ss_pred ccchhhcccccc-cceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeE
Confidence 7531 1 11111 1111111 1122221
Q ss_pred ----------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc--
Q psy2085 102 ----------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE-- 163 (358)
Q Consensus 102 ----------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P-- 163 (358)
+.|.||+|-.+ ..|+|||+||.|-+|++-+++++.+...+.+..+..-. ...|
T Consensus 312 lwKi~eesqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~--------~~~~~W 382 (479)
T KOG0299|consen 312 LWKIPEESQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDP--------VNGNFW 382 (479)
T ss_pred EEeccccceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCccc--------cccccc
Confidence 46677776332 34677778888888887777777666543332211000 0111
Q ss_pred -eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 -SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 -~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++|+-.|..++++| .+ .||+|-+.+|-
T Consensus 383 itsla~i~~sdL~asGS~~G~vrLW~i~~g~ 413 (479)
T KOG0299|consen 383 ITSLAVIPGSDLLASGSWSGCVRLWKIEDGL 413 (479)
T ss_pred eeeeEecccCceEEecCCCCceEEEEecCCc
Confidence 78999999999997 46 99999999883
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=1e-08 Score=107.80 Aligned_cols=42 Identities=19% Similarity=0.392 Sum_probs=38.7
Q ss_pred eEEEEeeCC-CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 37 ELIQDFEMP-GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 37 eliqdfe~~-~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
+.|..|.++ +.|+.++|.-||..++|+|+..|.+-+||++..
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~k 277 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKK 277 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCC
Confidence 678899997 999999999999999999998899999999864
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.03 E-value=9.2e-09 Score=98.18 Aligned_cols=138 Identities=17% Similarity=0.155 Sum_probs=83.7
Q ss_pred EEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
.|..|. |...|++++.+|-+... .+|+.|.+|++||++.. ++...+. + .+-..++|.|+|-++
T Consensus 92 ylRYF~GH~~~V~sL~~sP~~d~F-lS~S~D~tvrLWDlR~~--~cqg~l~--------~-----~~~pi~AfDp~GLif 155 (311)
T KOG1446|consen 92 YLRYFPGHKKRVNSLSVSPKDDTF-LSSSLDKTVRLWDLRVK--KCQGLLN--------L-----SGRPIAAFDPEGLIF 155 (311)
T ss_pred eEEEcCCCCceEEEEEecCCCCeE-EecccCCeEEeeEecCC--CCceEEe--------c-----CCCcceeECCCCcEE
Confidence 455664 77789999999988755 46778999999999832 2221111 0 233566777777777
Q ss_pred EEEeCCCeEEEEeCCCCc--eeEEE--e----CCCCcc-----------cc----ccCCCccccc----cCCC------c
Q psy2085 117 CVGTIEGKVEAWDPRMKV--KAGTL--D----CAFNCI-----------SN----ERDTEEKEGK----ASSD------E 163 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~--~i~~L--~----~~~~~v-----------~~----~~~i~gl~Gt----Rs~~------P 163 (358)
|+|...+.|+++|+|+-. +-.++ . +....+ +. .+-+++..|+ .+.. |
T Consensus 156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~ 235 (311)
T KOG1446|consen 156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLP 235 (311)
T ss_pred EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcc
Confidence 777666677777777531 11111 0 111110 00 0112223344 1111 2
Q ss_pred eeeEEcCCCCEEEE-e-c-ceEEEECCCCcE
Q psy2085 164 SSEEEEEEEEEEES-S-D-DDQAWTKEIKKT 191 (358)
Q Consensus 164 ~sI~fs~d~~~llS-a-D-~IKIWD~~tG~~ 191 (358)
-+..|+||+++|++ + | +|.||++++|+.
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~ 266 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKK 266 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcE
Confidence 57889999999997 3 4 999999999983
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.9e-09 Score=104.46 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=91.8
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-e
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-R 84 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r 84 (358)
-++++|+.+..|-....-.-+++ -.||.+-.+. |..+||+|+|+|+|.. +|+|++++.|.||-...-..... +
T Consensus 30 aT~G~D~~iriW~v~r~~~~~~~----~~V~y~s~Ls~H~~aVN~vRf~p~gel-LASg~D~g~v~lWk~~~~~~~~~d~ 104 (434)
T KOG1009|consen 30 ATAGGDKDIRIWKVNRSEPGGGD----MKVEYLSSLSRHTRAVNVVRFSPDGEL-LASGGDGGEVFLWKQGDVRIFDADT 104 (434)
T ss_pred ecccCccceeeeeeeecCCCCCc----eeEEEeecccCCcceeEEEEEcCCcCe-eeecCCCceEEEEEecCcCCccccc
Confidence 45666777777771111011111 4677777775 7789999999999995 58899999999998763111000 0
Q ss_pred --eccCce--EEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 85 --CFDSEV--VTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 85 --~~d~e~--v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
..+.|. |.- .+. .+...|..++|+|++..+++|+-|.++.+||++.|+.+..++.|.+-+
T Consensus 105 e~~~~ke~w~v~k-~lr-~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yv 168 (434)
T KOG1009|consen 105 EADLNKEKWVVKK-VLR-GHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYV 168 (434)
T ss_pred hhhhCccceEEEE-Eec-ccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccccc
Confidence 011111 111 111 133678999999999999999999999999999999999999887654
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.6e-09 Score=110.69 Aligned_cols=134 Identities=18% Similarity=0.285 Sum_probs=95.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+|..|.+| +++++|+.+|+++ |.|+.|-.|+|-++.+.+.. ..|.++ ++|.+|.++|.+.+|
T Consensus 91 iL~Rftlp--~r~~~v~g~g~~i-aagsdD~~vK~~~~~D~s~~~~lrgh~--------------apVl~l~~~p~~~fL 153 (933)
T KOG1274|consen 91 ILARFTLP--IRDLAVSGSGKMI-AAGSDDTAVKLLNLDDSSQEKVLRGHD--------------APVLQLSYDPKGNFL 153 (933)
T ss_pred eeeeeecc--ceEEEEecCCcEE-EeecCceeEEEEeccccchheeecccC--------------CceeeeeEcCCCCEE
Confidence 34444444 7999999999988 55677889999999876543 233333 678999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCC---cc------ccccCCCccc-------cc---------------cC----C
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFN---CI------SNERDTEEKE-------GK---------------AS----S 161 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~---~v------~~~~~i~gl~-------Gt---------------Rs----~ 161 (358)
|+.+.||+|.|||+.++.+..+|.+-.. .+ ...+.++|.. ++ |. +
T Consensus 154 Avss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss 233 (933)
T KOG1274|consen 154 AVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSS 233 (933)
T ss_pred EEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccccccc
Confidence 9999999999999999998877764211 11 0112333211 11 11 0
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
.-..++|+|.|.+|++ .| .|-|||.++
T Consensus 234 ~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 234 KFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred ceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 0167899999999997 46 999999985
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.1e-09 Score=100.87 Aligned_cols=91 Identities=18% Similarity=0.300 Sum_probs=72.3
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
||-..++++. .+|++||+.|.+| |.|+.+|+|-|||+.+... .|-+.+++ .+|.+++||++|..|
T Consensus 16 el~~tld~~~-a~~~~Fs~~G~~l-AvGc~nG~vvI~D~~T~~i--ar~lsaH~-----------~pi~sl~WS~dgr~L 80 (405)
T KOG1273|consen 16 ELTHTLDNPL-AECCQFSRWGDYL-AVGCANGRVVIYDFDTFRI--ARMLSAHV-----------RPITSLCWSRDGRKL 80 (405)
T ss_pred hhceeccCCc-cceEEeccCccee-eeeccCCcEEEEEccccch--hhhhhccc-----------cceeEEEecCCCCEe
Confidence 3444555555 8999999999876 7888999999999986432 12222222 579999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
.|+|.|-.|.+||++.|.++..+.-.
T Consensus 81 ltsS~D~si~lwDl~~gs~l~rirf~ 106 (405)
T KOG1273|consen 81 LTSSRDWSIKLWDLLKGSPLKRIRFD 106 (405)
T ss_pred eeecCCceeEEEeccCCCceeEEEcc
Confidence 99999999999999999999887653
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-09 Score=112.50 Aligned_cols=157 Identities=11% Similarity=0.112 Sum_probs=108.6
Q ss_pred eEEEEeecCCceeeee---eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 4 EYCYQTNWHKQAVTLV---IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~---~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
.|.|+++-|+.+.+|. .+.+-+ .+ .++.++ |...|+.+....+|+.|+ +++.|-+|++|+.....
T Consensus 38 ryLfTgGRDg~i~~W~~~~d~~~~s---~~-------~~asme~HsDWVNDiiL~~~~~tlI-S~SsDtTVK~W~~~~~~ 106 (735)
T KOG0308|consen 38 RYLFTGGRDGIIRLWSVTQDSNEPS---TP-------YIASMEHHSDWVNDIILCGNGKTLI-SASSDTTVKVWNAHKDN 106 (735)
T ss_pred ceEEecCCCceEEEeccccccCCcc---cc-------hhhhhhhhHhHHhhHHhhcCCCceE-EecCCceEEEeecccCc
Confidence 4999999999999999 222211 11 344454 567899999999998775 45678999999987542
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEE-cCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEeCCCCccccccCCCccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAI-NPVHQLICVGTIEGKVEAWDPRMK--VKAGTLDCAFNCISNERDTEEKE 156 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~-np~~~llasGs~DGtV~iWD~Rs~--~~i~~L~~~~~~v~~~~~i~gl~ 156 (358)
--|.+.+ -+|++.|.|+++ .++..++||||-|+.|.+||+.++ +.+++.+.....-......+++
T Consensus 107 ~~c~sti-----------r~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~si- 174 (735)
T KOG0308|consen 107 TFCMSTI-----------RTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSI- 174 (735)
T ss_pred chhHhhh-----------hcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccce-
Confidence 1111111 112256999999 888999999999999999999988 3444444211110000111111
Q ss_pred cccCCCceeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
++++-++.|..|++++ .+++||.++++
T Consensus 175 -------YSLA~N~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 175 -------YSLAMNQTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred -------eeeecCCcceEEEecCcccceEEecccccc
Confidence 8999999998888876 99999999877
|
|
| >PF08159 NUC153: NUC153 domain; InterPro: IPR012580 This small domain is found in a novel nucleolar family [] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-10 Score=74.22 Aligned_cols=24 Identities=42% Similarity=0.761 Sum_probs=22.9
Q ss_pred ChhhhhccCCCCccccCCCccccC
Q psy2085 335 DDRFSKLFENPDFQVIEPSSDQVR 358 (358)
Q Consensus 335 d~rf~~~f~~~~f~id~~~~e~~~ 358 (358)
|+||++||+||||+||++++||++
T Consensus 1 D~RF~~lf~~~dF~ID~t~~~yk~ 24 (30)
T PF08159_consen 1 DPRFKALFEDPDFAIDPTSPEYKK 24 (30)
T ss_pred CchHHHhhCCcccccCCCCHHHHh
Confidence 899999999999999999999974
|
; GO: 0005634 nucleus |
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-09 Score=107.47 Aligned_cols=126 Identities=16% Similarity=0.229 Sum_probs=91.6
Q ss_pred eeEEEEeeCCCCEeEEEEcCC-------CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEe------------
Q psy2085 36 IELIQDFEMPGVSTSVRISPD-------GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEIL------------ 96 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpD-------G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~L------------ 96 (358)
+-+.+||--|.---|+.|-.- |.|+ |.|+.+|.|.|||+.=.. .+..+..|
T Consensus 164 lYvHHD~ilpafPLC~ewld~~~~~~~~gNyv-AiGtmdp~IeIWDLDI~d---------~v~P~~~LGs~~sk~~~k~~ 233 (463)
T KOG0270|consen 164 LYVHHDFILPAFPLCIEWLDHGSKSGGAGNYV-AIGTMDPEIEIWDLDIVD---------AVLPCVTLGSKASKKKKKKG 233 (463)
T ss_pred eeEecceeccCcchhhhhhhcCCCCCCCcceE-EEeccCceeEEecccccc---------ccccceeechhhhhhhhhhc
Confidence 345566654544466666543 5676 789999999999985110 00011111
Q ss_pred -----ecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC
Q psy2085 97 -----SDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE 170 (358)
Q Consensus 97 -----S~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~ 170 (358)
...|++.|.+++||.. .++|||||.|.||++||+.+++|..++..|...| .+++|||
T Consensus 234 k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~V-----------------q~l~wh~ 296 (463)
T KOG0270|consen 234 KRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKV-----------------QTLEWHP 296 (463)
T ss_pred ccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCce-----------------eEEEecC
Confidence 1234567889999986 6799999999999999999999999999877777 8899999
Q ss_pred CCC-EEEE--ec-ceEEEECCC
Q psy2085 171 EEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 171 d~~-~llS--aD-~IKIWD~~t 188 (358)
... .|+| .| +|++.|.+.
T Consensus 297 ~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 297 YEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred CCceEEEeccccceEEeeeccC
Confidence 765 4554 78 999999983
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=7.1e-08 Score=92.48 Aligned_cols=152 Identities=12% Similarity=0.120 Sum_probs=102.5
Q ss_pred EEEEeecCCc-------eeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC
Q psy2085 5 YCYQTNWHKQ-------AVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 5 ~~~~~~~~~~-------~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ 77 (358)
|+-=|.+++. +.-|+..+. .++-.++|...|..|++++|. |++. -+.+|.||...+
T Consensus 60 ~laLVGGg~~pky~pNkviIWDD~k~-------------~~i~el~f~~~I~~V~l~r~r--iVvv--l~~~I~VytF~~ 122 (346)
T KOG2111|consen 60 YLALVGGGSRPKYPPNKVIIWDDLKE-------------RCIIELSFNSEIKAVKLRRDR--IVVV--LENKIYVYTFPD 122 (346)
T ss_pred eEEEecCCCCCCCCCceEEEEecccC-------------cEEEEEEeccceeeEEEcCCe--EEEE--ecCeEEEEEcCC
Confidence 4444555542 777884444 266778899999999999985 4443 367888888763
Q ss_pred -Cceeeeeec--------------cCce----------EEEEEee----------cCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 78 -LSMKFERCF--------------DSEV----------VTFEILS----------DDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 78 -lslk~~r~~--------------d~e~----------v~f~~LS----------~D~s~~In~i~~np~~~llasGs~D 122 (358)
+.+.+.-.+ ...+ +....|. +-|.+.|-|+++|-+|.++||+|..
T Consensus 123 n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStk 202 (346)
T KOG2111|consen 123 NPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTK 202 (346)
T ss_pred ChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccC
Confidence 211110000 0000 0011111 1122789999999999999999999
Q ss_pred Ce-EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec--ceEEEECCC
Q psy2085 123 GK-VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD--DDQAWTKEI 188 (358)
Q Consensus 123 Gt-V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD--~IKIWD~~t 188 (358)
|| |+|||.++|..+..+.-..... .+ .+|+|||++.+|+ |+| |++|+.++.
T Consensus 203 GTLIRIFdt~~g~~l~E~RRG~d~A----~i-----------y~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 203 GTLIRIFDTEDGTLLQELRRGVDRA----DI-----------YCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred cEEEEEEEcCCCcEeeeeecCCchh----eE-----------EEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 98 7899999999999987433221 11 8899999999998 578 999998865
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.1e-09 Score=106.80 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=96.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee-eeeccCceEEEEEeecC--------------------------
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF-ERCFDSEVVTFEILSDD-------------------------- 99 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~-~r~~d~e~v~f~~LS~D-------------------------- 99 (358)
.+.++++|||||+| |+|.--|.+||||+.++...+ ...+++|+.....--|+
T Consensus 461 G~R~~~vSp~gqhL-AsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l 539 (1080)
T KOG1408|consen 461 GFRALAVSPDGQHL-ASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDL 539 (1080)
T ss_pred ceEEEEECCCccee-cccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccch
Confidence 68999999999998 788888999999998865431 12223444332211111
Q ss_pred ------CC-------------------------------------------------CCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 100 ------YS-------------------------------------------------SELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 100 ------~s-------------------------------------------------~~In~i~~np~~~llasGs~DGt 124 (358)
|+ ..+..+++.|...++++++.|..
T Consensus 540 ~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrn 619 (1080)
T KOG1408|consen 540 VQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRN 619 (1080)
T ss_pred hhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccc
Confidence 11 56778888899999999999999
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|+|+.+++.+..+.+..+.. .++ ..+...|.|-+|++ +| ++-|+|.-+|+
T Consensus 620 irif~i~sgKq~k~FKgs~~~e---G~l-----------IKv~lDPSgiY~atScsdktl~~~Df~sgE 674 (1080)
T KOG1408|consen 620 IRIFDIESGKQVKSFKGSRDHE---GDL-----------IKVILDPSGIYLATSCSDKTLCFVDFVSGE 674 (1080)
T ss_pred eEEEeccccceeeeecccccCC---Cce-----------EEEEECCCccEEEEeecCCceEEEEeccch
Confidence 9999999999999998643211 011 67889999999996 68 99999999988
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.2e-08 Score=105.47 Aligned_cols=132 Identities=11% Similarity=0.051 Sum_probs=101.7
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.++|+||++..|. ....|.|+.+ ...|+.+++-|++.+| +++.||.|+.|++....+. ++
T Consensus 155 vTgsaDKtIklWk~~~~l~tf~gH---------------tD~VRgL~vl~~~~fl--ScsNDg~Ir~w~~~ge~l~--~~ 215 (745)
T KOG0301|consen 155 VTGSADKTIKLWKGGTLLKTFSGH---------------TDCVRGLAVLDDSHFL--SCSNDGSIRLWDLDGEVLL--EM 215 (745)
T ss_pred EeccCcceeeeccCCchhhhhccc---------------hhheeeeEEecCCCeE--eecCCceEEEEeccCceee--ee
Confidence 5789999999998 5555555544 4679999999998865 6678999999999643321 11
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCcee
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESS 165 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~s 165 (358)
. .|+..|.+++..+.+++++|+|+|++++||+.. .++++|..+..++ -+
T Consensus 216 ~------------ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsi-----------------Ws 264 (745)
T KOG0301|consen 216 H------------GHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSI-----------------WS 264 (745)
T ss_pred e------------ccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccce-----------------EE
Confidence 1 122568889988888999999999999999965 8889998877555 66
Q ss_pred eEEcCCCCEEE-Eec-ceEEEECCC
Q psy2085 166 EEEEEEEEEEE-SSD-DDQAWTKEI 188 (358)
Q Consensus 166 I~fs~d~~~ll-SaD-~IKIWD~~t 188 (358)
+.+-++|+.++ ++| .|+||-...
T Consensus 265 a~~L~NgDIvvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 265 AKVLLNGDIVVGGSDGRVRVFTVDK 289 (745)
T ss_pred EEEeeCCCEEEeccCceEEEEEecc
Confidence 77888898777 489 999998763
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.3e-09 Score=108.80 Aligned_cols=79 Identities=16% Similarity=0.327 Sum_probs=62.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D 122 (358)
|-.+|..++|-| |+.++++.+.|.++|+||+++..+. + .. +--+|++.|.++||.|.++ .|++||.|
T Consensus 99 H~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk~s~l~--G----~~-----~~~GH~~SvkS~cf~~~n~~vF~tGgRD 166 (720)
T KOG0321|consen 99 HKNAIFDLKWAP-GESLLVSASGDSTIRPWDVKTSRLV--G----GR-----LNLGHTGSVKSECFMPTNPAVFCTGGRD 166 (720)
T ss_pred ccceeEeeccCC-CceeEEEccCCceeeeeeeccceee--c----ce-----eecccccccchhhhccCCCcceeeccCC
Confidence 668999999999 8888888888999999999875321 0 00 1113347899999999865 89999999
Q ss_pred CeEEEEeCCCCc
Q psy2085 123 GKVEAWDPRMKV 134 (358)
Q Consensus 123 GtV~iWD~Rs~~ 134 (358)
|.|.|||+|...
T Consensus 167 g~illWD~R~n~ 178 (720)
T KOG0321|consen 167 GEILLWDCRCNG 178 (720)
T ss_pred CcEEEEEEeccc
Confidence 999999998765
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.2e-09 Score=102.23 Aligned_cols=155 Identities=13% Similarity=0.057 Sum_probs=114.9
Q ss_pred EEEEeecCCceeeee-e------ccCccc-------CCC-----------cccccceeEEEEeeCC-CCEeEEEEcCCCC
Q psy2085 5 YCYQTNWHKQAVTLV-I------IGGRYL-------LPT-----------NDIRRRIELIQDFEMP-GVSTSVRISPDGQ 58 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~------~~~r~l-------k~d-----------~~~~~rIeliqdfe~~-~~v~~v~~SpDG~ 58 (358)
--++++.||++..|- + ....+- +.+ .=..+|-..++++.-. ..+.+|+|+|--.
T Consensus 121 ~~~tvgdDKtvK~wk~~~~p~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvET 200 (433)
T KOG0268|consen 121 SFFTVGDDKTVKQWKIDGPPLHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVET 200 (433)
T ss_pred ceEEecCCcceeeeeccCCcceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcc
Confidence 357899999999997 1 111111 111 1112344456666532 4689999999999
Q ss_pred EEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeE
Q psy2085 59 YVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK-VKAG 137 (358)
Q Consensus 59 ~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~-~~i~ 137 (358)
.|+++|..|+.|-|||+.+.+..- .-+.+ -.-|.|+|||..--|.+|++|..+..+|+|.- .+++
T Consensus 201 sILas~~sDrsIvLyD~R~~~Pl~-----KVi~~---------mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~ 266 (433)
T KOG0268|consen 201 SILASCASDRSIVLYDLRQASPLK-----KVILT---------MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLN 266 (433)
T ss_pred hheeeeccCCceEEEecccCCccc-----eeeee---------ccccceecCccccceeeccccccceehhhhhhcccch
Confidence 999999899999999998754210 00111 24699999998888999999999999999974 4577
Q ss_pred EEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 138 TLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+..+|.+.+ .+|.|||.|+-++| .| +|+|+..+.|.
T Consensus 267 v~~dhvsAV-----------------~dVdfsptG~EfvsgsyDksIRIf~~~~~~ 305 (433)
T KOG0268|consen 267 VHKDHVSAV-----------------MDVDFSPTGQEFVSGSYDKSIRIFPVNHGH 305 (433)
T ss_pred hhcccceeE-----------------EEeccCCCcchhccccccceEEEeecCCCc
Confidence 777888777 88999999999986 58 99999998877
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.6e-09 Score=111.12 Aligned_cols=121 Identities=11% Similarity=0.180 Sum_probs=93.4
Q ss_pred CCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCC
Q psy2085 46 GVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEG 123 (358)
Q Consensus 46 ~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DG 123 (358)
..|..+.|.| |.+.| |.++.+++|++|.+....+.-.-..-..+++ .+...|.++.|+|- ..+||+++.|.
T Consensus 628 t~vtDl~WdPFD~~rL-AVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt------~h~eKI~slRfHPLAadvLa~asyd~ 700 (1012)
T KOG1445|consen 628 TLVTDLHWDPFDDERL-AVATDDGQINLWRLTANGLPENEMTPEKILT------IHGEKITSLRFHPLAADVLAVASYDS 700 (1012)
T ss_pred ceeeecccCCCChHHe-eecccCceEEEEEeccCCCCcccCCcceeee------cccceEEEEEecchhhhHhhhhhccc
Confidence 3578889999 66666 5677899999999875432100000011111 12267999999995 67999999999
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||++||+++.+.-..|.+|.+.| ..|+|||+|+.++| -| +|+++..+++.
T Consensus 701 Ti~lWDl~~~~~~~~l~gHtdqI-----------------f~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 701 TIELWDLANAKLYSRLVGHTDQI-----------------FGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred eeeeeehhhhhhhheeccCcCce-----------------eEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 99999999999888999998877 78999999999997 58 99999998876
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-08 Score=97.69 Aligned_cols=135 Identities=13% Similarity=0.165 Sum_probs=99.1
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce--
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM-- 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl-- 80 (358)
-..++|||+++-+|+ |.. |+++-+. |....+.++-.|..+ |+.|.+-|.+.|+||..+.-.
T Consensus 286 Q~vTaSWDRTAnlwDVEtg--------------e~v~~LtGHd~ELtHcstHptQr-LVvTsSrDtTFRLWDFReaI~sV 350 (481)
T KOG0300|consen 286 QMVTASWDRTANLWDVETG--------------EVVNILTGHDSELTHCSTHPTQR-LVVTSSRDTTFRLWDFREAIQSV 350 (481)
T ss_pred eeeeeeccccceeeeeccC--------------ceeccccCcchhccccccCCcce-EEEEeccCceeEeccchhhccee
Confidence 356899999999999 533 3444442 555567777888776 557788899999999985211
Q ss_pred -eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccc
Q psy2085 81 -KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 81 -k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
-|.. +++.|+++.|+-+. -+++|++|.||++||+|. +.+++++.... ++
T Consensus 351 ~VFQG---------------HtdtVTS~vF~~dd-~vVSgSDDrTvKvWdLrNMRsplATIRtdS-~~------------ 401 (481)
T KOG0300|consen 351 AVFQG---------------HTDTVTSVVFNTDD-RVVSGSDDRTVKVWDLRNMRSPLATIRTDS-PA------------ 401 (481)
T ss_pred eeecc---------------cccceeEEEEecCC-ceeecCCCceEEEeeeccccCcceeeecCC-cc------------
Confidence 1333 33678999998766 567899999999999986 56788887543 33
Q ss_pred cCCCceeeEEcCCCCEEEE-ec--ceEEEECCC
Q psy2085 159 ASSDESSEEEEEEEEEEES-SD--DDQAWTKEI 188 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS-aD--~IKIWD~~t 188 (358)
+.|+.+..+..|+- .| .|+|+|+.-
T Consensus 402 -----NRvavs~g~~iIAiPhDNRqvRlfDlnG 429 (481)
T KOG0300|consen 402 -----NRVAVSKGHPIIAIPHDNRQVRLFDLNG 429 (481)
T ss_pred -----ceeEeecCCceEEeccCCceEEEEecCC
Confidence 78888876665554 78 999999973
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.2e-08 Score=100.03 Aligned_cols=115 Identities=17% Similarity=0.091 Sum_probs=87.9
Q ss_pred EEeecCCceeeee-e--ccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 7 YQTNWHKQAVTLV-I--IGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~--~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
=|+|-|-+++.|. + -+.|.|. |.+..+ .|.-.|.-|.|.|-...+++|+++|++|.||++.+.....
T Consensus 98 ASgSeD~~v~vW~IPe~~l~~~lt---------epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali 168 (472)
T KOG0303|consen 98 ASGSEDTKVMVWQIPENGLTRDLT---------EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALI 168 (472)
T ss_pred ecCCCCceEEEEECCCcccccCcc---------cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceee
Confidence 3678888899999 2 3333333 333344 3667899999999988888888889999999998753111
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.| +|.+-|.+++||-+|++|+|.+.|..|++||+|+++.+..-.+|.+
T Consensus 169 ------------~l--~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG 216 (472)
T KOG0303|consen 169 ------------TL--DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEG 216 (472)
T ss_pred ------------ec--CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccC
Confidence 11 1335799999999999999999999999999999999887766654
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=4.6e-08 Score=103.05 Aligned_cols=126 Identities=12% Similarity=0.208 Sum_probs=92.7
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-----------eeccCce-----EEEEE-eec-------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-----------RCFDSEV-----VTFEI-LSD------- 98 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-----------r~~d~e~-----v~f~~-LS~------- 98 (358)
.|.++|..++.-.-++.++ |++++|-++.||..+..++-. .|..+.. -+|.+ +=+
T Consensus 491 ah~~~V~gla~D~~n~~~v-sa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv 569 (910)
T KOG1539|consen 491 AHKGEVTGLAVDGTNRLLV-SAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV 569 (910)
T ss_pred cccCceeEEEecCCCceEE-EccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence 4678899999988887664 556899999999987653311 1111110 00111 011
Q ss_pred ----CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 99 ----DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 99 ----D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
+++..||.++|||++..|++++.|++|++||+-++.++-.+.....+ ++|.|+|+|++
T Consensus 570 R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~------------------~sls~SPngD~ 631 (910)
T KOG1539|consen 570 REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPC------------------TSLSFSPNGDF 631 (910)
T ss_pred HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcc------------------eeeEECCCCCE
Confidence 13378999999999999999999999999999999999887665433 78999999999
Q ss_pred EEEe--c--ceEEEECC
Q psy2085 175 EESS--D--DDQAWTKE 187 (358)
Q Consensus 175 llSa--D--~IKIWD~~ 187 (358)
|+++ | -|.+|-=.
T Consensus 632 LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 632 LATVHVDQNGIYLWSNK 648 (910)
T ss_pred EEEEEecCceEEEEEch
Confidence 9984 6 89999643
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.6e-08 Score=105.74 Aligned_cols=129 Identities=16% Similarity=0.162 Sum_probs=99.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-cCce--------EEEEEeecCCC-------------
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-DSEV--------VTFEILSDDYS------------- 101 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-d~e~--------v~f~~LS~D~s------------- 101 (358)
|..+-+.|+|.|+|++|+++| .+|-|++|+.....-..+.-. ..+. -.|+..+.+.+
T Consensus 12 ht~G~t~i~~d~~gefi~tcg-sdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 12 HTGGLTLICYDPDGEFICTCG-SDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred ccCceEEEEEcCCCCEEEEec-CCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccc
Confidence 455688999999999886655 589999999765411110000 0111 12333333333
Q ss_pred ------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 102 ------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 102 ------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
-++++++|+-+|.++|.||+|=.|++-++.......++.+|..++ .+|.|+|.+.+|
T Consensus 91 iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apV-----------------l~l~~~p~~~fL 153 (933)
T KOG1274|consen 91 ILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPV-----------------LQLSYDPKGNFL 153 (933)
T ss_pred eeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCce-----------------eeeeEcCCCCEE
Confidence 579999999999999999999999999999999999999999887 889999999999
Q ss_pred EE--ec-ceEEEECCCCc
Q psy2085 176 ES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 176 lS--aD-~IKIWD~~tG~ 190 (358)
++ +| +|+|||+.+|.
T Consensus 154 Avss~dG~v~iw~~~~~~ 171 (933)
T KOG1274|consen 154 AVSSCDGKVQIWDLQDGI 171 (933)
T ss_pred EEEecCceEEEEEcccch
Confidence 96 57 99999999987
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.2e-08 Score=100.56 Aligned_cols=117 Identities=11% Similarity=0.060 Sum_probs=88.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|...|.-+.||++|+|| ||++-|.+.-||++....- +. +.... .++..+|.-|.|||+...|.++|.|.
T Consensus 223 htdEVWfl~FS~nGkyL-AsaSkD~Taiiw~v~~d~~-~k-------l~~tl--vgh~~~V~yi~wSPDdryLlaCg~~e 291 (519)
T KOG0293|consen 223 HTDEVWFLQFSHNGKYL-ASASKDSTAIIWIVVYDVH-FK-------LKKTL--VGHSQPVSYIMWSPDDRYLLACGFDE 291 (519)
T ss_pred CCCcEEEEEEcCCCeeE-eeccCCceEEEEEEecCcc-ee-------eeeee--ecccCceEEEEECCCCCeEEecCchH
Confidence 66789999999999998 6778899999999864321 10 00111 12236899999999999888888889
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.+.+||..+|.+....... . .+++ .+++|.|||..+++ .| +|..||.+
T Consensus 292 ~~~lwDv~tgd~~~~y~~~-~----~~S~-----------~sc~W~pDg~~~V~Gs~dr~i~~wdlD 342 (519)
T KOG0293|consen 292 VLSLWDVDTGDLRHLYPSG-L----GFSV-----------SSCAWCPDGFRFVTGSPDRTIIMWDLD 342 (519)
T ss_pred heeeccCCcchhhhhcccC-c----CCCc-----------ceeEEccCCceeEecCCCCcEEEecCC
Confidence 9999999999877665432 1 1222 78999999998886 68 99999986
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=6.2e-09 Score=98.68 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=85.7
Q ss_pred CCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe
Q psy2085 44 MPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT 120 (358)
Q Consensus 44 ~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs 120 (358)
|...-++-+||| ||..+++++ ++++.+||++++.. .-.+ .+-|...|..++|||+-+ +|+|||
T Consensus 169 ~~~~ftsg~WspHHdgnqv~tt~--d~tl~~~D~RT~~~--~~sI----------~dAHgq~vrdlDfNpnkq~~lvt~g 234 (370)
T KOG1007|consen 169 MRHSFTSGAWSPHHDGNQVATTS--DSTLQFWDLRTMKK--NNSI----------EDAHGQRVRDLDFNPNKQHILVTCG 234 (370)
T ss_pred ccceecccccCCCCccceEEEeC--CCcEEEEEccchhh--hcch----------hhhhcceeeeccCCCCceEEEEEcC
Confidence 344456779999 888887665 78999999996432 1111 011114588999999865 799999
Q ss_pred CCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCC
Q psy2085 121 IEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEI 188 (358)
Q Consensus 121 ~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~t 188 (358)
+||.|+|||.|.- .++..|.+|.+-+ -+|.|+|....|+ | +| .|.+|...+
T Consensus 235 DdgyvriWD~R~tk~pv~el~~HsHWv-----------------W~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 235 DDGYVRIWDTRKTKFPVQELPGHSHWV-----------------WAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred CCccEEEEeccCCCccccccCCCceEE-----------------EEEEecCccceEEEecCCCceeEEEeccc
Confidence 9999999999964 5789999988876 7799999876655 5 78 999998754
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.8e-08 Score=100.35 Aligned_cols=138 Identities=19% Similarity=0.176 Sum_probs=92.8
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
|+|..|..++.|..++||.||+.|+++|++ |+|-+||+++.+.. .|-.| +..-.-.++|.++++.+|
T Consensus 336 eli~s~KieG~v~~~~fsSdsk~l~~~~~~-GeV~v~nl~~~~~~-~rf~D-----------~G~v~gts~~~S~ng~yl 402 (514)
T KOG2055|consen 336 ELITSFKIEGVVSDFTFSSDSKELLASGGT-GEVYVWNLRQNSCL-HRFVD-----------DGSVHGTSLCISLNGSYL 402 (514)
T ss_pred hhhheeeeccEEeeEEEecCCcEEEEEcCC-ceEEEEecCCcceE-EEEee-----------cCccceeeeeecCCCceE
Confidence 788899999999999999999999998875 69999999976321 12222 211234678888999999
Q ss_pred EEEeCCCeEEEEeCCC------CceeEEEeCCCCcccc-ccCCCc----cc---------------cc-cCCC-------
Q psy2085 117 CVGTIEGKVEAWDPRM------KVKAGTLDCAFNCISN-ERDTEE----KE---------------GK-ASSD------- 162 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs------~~~i~~L~~~~~~v~~-~~~i~g----l~---------------Gt-Rs~~------- 162 (358)
|+||+.|.|.|+|..+ .+++.+++.-...|+. .|+.++ |. -| -+..
T Consensus 403 A~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~v 482 (514)
T KOG2055|consen 403 ATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKV 482 (514)
T ss_pred EeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcc
Confidence 9999999999999543 2344444322222221 132222 10 11 1111
Q ss_pred --ceeeEEcCCCCEEEEe--c-ceEEEECC
Q psy2085 163 --ESSEEEEEEEEEEESS--D-DDQAWTKE 187 (358)
Q Consensus 163 --P~sI~fs~d~~~llSa--D-~IKIWD~~ 187 (358)
+++++|||.|.+|+-+ + .|.+|.+.
T Consensus 483 g~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 483 GHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cceEEEEecCCCceEEeecCCCceeeEeec
Confidence 1889999988888853 3 89999764
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.7e-08 Score=92.56 Aligned_cols=165 Identities=13% Similarity=0.148 Sum_probs=102.3
Q ss_pred ecCCceeeee--eccCcccCCCcccccceeEEEE--eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--ee
Q psy2085 10 NWHKQAVTLV--IIGGRYLLPTNDIRRRIELIQD--FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FE 83 (358)
Q Consensus 10 ~~~~~~~~~~--~~~~r~lk~d~~~~~rIeliqd--fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~ 83 (358)
.+|+.+.+|. |..+ + +.-..+.+++-..|. .++|+ ||.+-+-|....|+.+| -|+.+.+||+++...+ +.
T Consensus 78 ~gdG~V~gw~W~E~~e-s-~~~K~lwe~~~P~~~~~~evPe-INam~ldP~enSi~~Ag-GD~~~y~~dlE~G~i~r~~r 153 (325)
T KOG0649|consen 78 GGDGLVYGWEWNEEEE-S-LATKRLWEVKIPMQVDAVEVPE-INAMWLDPSENSILFAG-GDGVIYQVDLEDGRIQREYR 153 (325)
T ss_pred ccCceEEEeeehhhhh-h-ccchhhhhhcCccccCcccCCc-cceeEeccCCCcEEEec-CCeEEEEEEecCCEEEEEEc
Confidence 4567788887 3322 1 122223333333333 45665 99999999777676666 4899999999986543 22
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
.|+ +.|.++.--....-+.||++||+|++||.++++++.+|..-..+-- .+|
T Consensus 154 GHt---------------DYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~-------------lRp 205 (325)
T KOG0649|consen 154 GHT---------------DYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNL-------------LRP 205 (325)
T ss_pred CCc---------------ceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhh-------------cCc
Confidence 333 4577777744455678999999999999999999999975333210 011
Q ss_pred --ee--eEEcCCCCEEEEec--ceEEEECCCCc---EEecCCCCC-ccccccch
Q psy2085 164 --SS--EEEEEEEEEEESSD--DDQAWTKEIKK---TYNLGPAPK-WCGFLDNL 207 (358)
Q Consensus 164 --~s--I~fs~d~~~llSaD--~IKIWD~~tG~---~y~lgpap~-Wcsfldnl 207 (358)
-+ .+..-+...|++.. .+-||.+.+.+ +|.+ |||. =|-|.|..
T Consensus 206 ~~g~wigala~~edWlvCGgGp~lslwhLrsse~t~vfpi-pa~v~~v~F~~d~ 258 (325)
T KOG0649|consen 206 DWGKWIGALAVNEDWLVCGGGPKLSLWHLRSSESTCVFPI-PARVHLVDFVDDC 258 (325)
T ss_pred ccCceeEEEeccCceEEecCCCceeEEeccCCCceEEEec-ccceeEeeeecce
Confidence 00 22333556777744 88888888766 2344 4443 35555443
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.5e-07 Score=86.35 Aligned_cols=116 Identities=20% Similarity=0.250 Sum_probs=86.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~ 121 (358)
.++..++.++|+|+++++++.+..++.+++|++.+... .. .+. .+...|.+++|+|++. ++++++.
T Consensus 153 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----------~~~-~~~~~v~~~~~~~~~~~~~~~~~~ 219 (466)
T COG2319 153 GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKP--LS----------TLA-GHTDPVSSLAFSPDGGLLIASGSS 219 (466)
T ss_pred cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCce--EE----------eec-cCCCceEEEEEcCCcceEEEEecC
Confidence 47788999999999997755433499999999986211 00 011 1236799999999998 6666699
Q ss_pred CCeEEEEeCCCCceeE-EEeCCCCccccccCCCccccccCCCceee-EEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAG-TLDCAFNCISNERDTEEKEGKASSDESSE-EEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~-~L~~~~~~v~~~~~i~gl~GtRs~~P~sI-~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||+|.+||.+.+..+. .+.+|... . + .|++++..+++ .| .+++||.....
T Consensus 220 d~~i~~wd~~~~~~~~~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 274 (466)
T COG2319 220 DGTIRLWDLSTGKLLRSTLSGHSDS------------------V-VSSFSPDGSLLASGSSDGTIRLWDLRSSS 274 (466)
T ss_pred CCcEEEEECCCCcEEeeecCCCCcc------------------e-eEeECCCCCEEEEecCCCcEEEeeecCCC
Confidence 9999999999887777 56666543 2 3 69999977775 57 99999998654
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.5e-07 Score=89.76 Aligned_cols=160 Identities=14% Similarity=0.093 Sum_probs=106.2
Q ss_pred EEEEe-ecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-Ccee
Q psy2085 5 YCYQT-NWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMK 81 (358)
Q Consensus 5 ~~~~~-~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk 81 (358)
|+|-+ ..++.+-.|+ ... .++++++.++..+....+.+||||++|++++..++.|.+|++.. ..+.
T Consensus 3 ~~y~~~~~~~~I~~~~~~~~-----------g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~ 71 (330)
T PRK11028 3 IVYIASPESQQIHVWNLNHE-----------GALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALT 71 (330)
T ss_pred EEEEEcCCCCCEEEEEECCC-----------CceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceE
Confidence 67777 4467788887 221 35677788877777889999999999987765678899999963 2332
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc----eeEEEeCCCCccccccCCCccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEAWDPRMKV----KAGTLDCAFNCISNERDTEEKE 156 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~iWD~Rs~~----~i~~L~~~~~~v~~~~~i~gl~ 156 (358)
..... ..+ +....|+++|+++.|.+++ .+|.|.+||+.+.. .+..+.+...+
T Consensus 72 ~~~~~---------~~~---~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~----------- 128 (330)
T PRK11028 72 FAAES---------PLP---GSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGC----------- 128 (330)
T ss_pred Eeeee---------cCC---CCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcc-----------
Confidence 21111 001 2456899999999777666 48999999986432 22222221111
Q ss_pred cccCCCceeeEEcCCCCEEEEe---c-ceEEEECCC-Cc-------EE--ecCCCCCcccccc
Q psy2085 157 GKASSDESSEEEEEEEEEEESS---D-DDQAWTKEI-KK-------TY--NLGPAPKWCGFLD 205 (358)
Q Consensus 157 GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~t-G~-------~y--~lgpap~Wcsfld 205 (358)
..+.|+|+|++++.+ + .|.|||+.+ |. .. ..|..|+++.|..
T Consensus 129 -------~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~p 184 (330)
T PRK11028 129 -------HSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHP 184 (330)
T ss_pred -------cEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECC
Confidence 678999999988753 3 999999976 32 11 3466677666543
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.3e-07 Score=94.31 Aligned_cols=163 Identities=14% Similarity=0.145 Sum_probs=111.0
Q ss_pred EEeecCCceeeee----eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce-e
Q psy2085 7 YQTNWHKQAVTLV----IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM-K 81 (358)
Q Consensus 7 ~~~~~~~~~~~~~----~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl-k 81 (358)
-+|+-|.+++..+ ....|-++=|.....+|.-|+=-.|| +.+++|.|+|+..+.+++..+-+..||+.+... |
T Consensus 217 ~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fP--i~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k 294 (514)
T KOG2055|consen 217 TSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFP--IQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTK 294 (514)
T ss_pred eEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCc--cceeeecCCCceEEEecccceEEEEeecccccccc
Confidence 4566677766666 56666666666666655555433455 899999999995556777788999999975321 1
Q ss_pred e--eeeccC-ceEEEEEeecCCC----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 82 F--ERCFDS-EVVTFEILSDDYS----------------------------SELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 82 ~--~r~~d~-e~v~f~~LS~D~s----------------------------~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
+ -++... ....|.+ |+|.. +.|..++|+.++..|...+.+|.|.+||+
T Consensus 295 ~~~~~g~e~~~~e~FeV-Shd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl 373 (514)
T KOG2055|consen 295 LKPPYGVEEKSMERFEV-SHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYVWNL 373 (514)
T ss_pred ccCCCCcccchhheeEe-cCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEEEec
Confidence 1 111110 0111211 11111 67899999999988877788999999999
Q ss_pred CCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEECCC
Q psy2085 131 RMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTKEI 188 (358)
Q Consensus 131 Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~~t 188 (358)
+++.++..+....+.-+ ++++-++++.+|++ +| +|.|||.++
T Consensus 374 ~~~~~~~rf~D~G~v~g----------------ts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 374 RQNSCLHRFVDDGSVHG----------------TSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred CCcceEEEEeecCccce----------------eeeeecCCCceEEeccCcceEEEeccch
Confidence 99999888753222111 67888999999998 67 999999775
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=5.7e-08 Score=93.28 Aligned_cols=156 Identities=19% Similarity=0.272 Sum_probs=103.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCC-EeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGV-STSVRISPDGQYVLSTGIYKPRVRCYETD-NLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~-v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lslk 81 (358)
.|.-|.|.|-.++.|.-. + .++|..+-+.. -..+++||||++|+++| .-|-|+||++- +..-.
T Consensus 200 k~imsas~dt~i~lw~lk-G-------------q~L~~idtnq~~n~~aavSP~GRFia~~g-FTpDVkVwE~~f~kdG~ 264 (420)
T KOG2096|consen 200 KYIMSASLDTKICLWDLK-G-------------QLLQSIDTNQSSNYDAAVSPDGRFIAVSG-FTPDVKVWEPIFTKDGT 264 (420)
T ss_pred eEEEEecCCCcEEEEecC-C-------------ceeeeeccccccccceeeCCCCcEEEEec-CCCCceEEEEEeccCcc
Confidence 588899999999999832 3 24444443322 34679999999997665 67899999963 11001
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee----EEEeCCCCccccccCCCcccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA----GTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i----~~L~~~~~~v~~~~~i~gl~G 157 (358)
| .|++..-.| .+|.+.|...+|||+...++|.|-||++++||+.-+-.. ..|.....+..+
T Consensus 265 f-----qev~rvf~L-kGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~a--------- 329 (420)
T KOG2096|consen 265 F-----QEVKRVFSL-KGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHA--------- 329 (420)
T ss_pred h-----hhhhhhhee-ccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhh---------
Confidence 1 122211111 344578999999999999999999999999998655322 122211111000
Q ss_pred ccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
....|..|+.+|+|+.|+. .- +++++..++|+
T Consensus 330 -ag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~ 363 (420)
T KOG2096|consen 330 -AGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGK 363 (420)
T ss_pred -cCCCceEEEeCCCCcEEEeecCCceEEEEcccCc
Confidence 0122378999999998875 44 99999999998
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.5e-08 Score=98.31 Aligned_cols=63 Identities=14% Similarity=0.213 Sum_probs=49.1
Q ss_pred EEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 7 YQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
+++|-+..+..|. ..++ ..-...+|.|..|. |.+.|-||.++++|++++ +|+.|++|+||.+.
T Consensus 310 it~sed~~lk~WnLqk~~------~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~y-sgg~Dg~I~~w~~p 374 (577)
T KOG0642|consen 310 ITASEDGTLKLWNLQKAK------KSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCY-SGGIDGTIRCWNLP 374 (577)
T ss_pred EEeccccchhhhhhcccC------CccccceeeeEEEecccCceEEEEecCCceEEE-eeccCceeeeeccC
Confidence 5667777788887 3322 22345678999996 899999999999999985 67789999999765
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.3e-08 Score=93.14 Aligned_cols=125 Identities=15% Similarity=0.134 Sum_probs=90.7
Q ss_pred eeEEEEee----CCCCEeEEEEcCCCCEEEEEE-ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 36 IELIQDFE----MPGVSTSVRISPDGQYVLSTG-IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 36 Ieliqdfe----~~~~v~~v~~SpDG~~LlatG-~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
+++++.++ .|.++....+++.+.||+--| ...|.|.|||+.++.....- +-|.+.|-|++||
T Consensus 116 MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I-------------~aH~~~lAalafs 182 (391)
T KOG2110|consen 116 MKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTI-------------NAHKGPLAALAFS 182 (391)
T ss_pred ceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEE-------------EecCCceeEEEEC
Confidence 45666654 334455555555666886433 34678999999876421110 0122789999999
Q ss_pred CCCCEEEEEeCCCe-EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEEC
Q psy2085 111 PVHQLICVGTIEGK-VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTK 186 (358)
Q Consensus 111 p~~~llasGs~DGt-V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~ 186 (358)
|+|.+|||+|+.|| |+++++-+|+.+..+.-...++. + .+|+|||++++|.+ ++ +|+|+.+
T Consensus 183 ~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~----I-----------ySL~Fs~ds~~L~~sS~TeTVHiFKL 247 (391)
T KOG2110|consen 183 PDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVS----I-----------YSLSFSPDSQFLAASSNTETVHIFKL 247 (391)
T ss_pred CCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeE----E-----------EEEEECCCCCeEEEecCCCeEEEEEe
Confidence 99999999999997 68999999999988875443321 2 88999999998885 55 9999998
Q ss_pred CC
Q psy2085 187 EI 188 (358)
Q Consensus 187 ~t 188 (358)
++
T Consensus 248 ~~ 249 (391)
T KOG2110|consen 248 EK 249 (391)
T ss_pred cc
Confidence 75
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.1e-08 Score=104.18 Aligned_cols=114 Identities=20% Similarity=0.256 Sum_probs=85.5
Q ss_pred CEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--C
Q psy2085 47 VSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI--E 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~--D 122 (358)
+++||+|||+|+|+ |||. ..|.+|||++.....- +|.+ ||.-.|.|++|+|.+.++++.|. |
T Consensus 80 ~~t~vAfS~~Gryv-atGEcG~~pa~kVw~la~h~vV------AEfv-------dHKY~vtcvaFsp~~kyvvSVGsQHD 145 (1080)
T KOG1408|consen 80 PLTCVAFSQNGRYV-ATGECGRTPASKVWSLAFHGVV------AEFV-------DHKYNVTCVAFSPGNKYVVSVGSQHD 145 (1080)
T ss_pred ceeEEEEcCCCcEE-EecccCCCccceeeeeccccch------hhhh-------hccccceeeeecCCCcEEEeeccccc
Confidence 57999999999998 6764 7789999999865421 2211 23358999999999998887665 7
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECCCCcEE
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKEIKKTY 192 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~tG~~y 192 (358)
-.|.+||-|.....+.-.. .+.| ..++|+.+|.+.+++- .||+|.++.++.|
T Consensus 146 MIVnv~dWr~N~~~asnki-ss~V-----------------sav~fsEdgSYfvT~gnrHvk~wyl~~~~Ky 199 (1080)
T KOG1408|consen 146 MIVNVNDWRVNSSGASNKI-SSVV-----------------SAVAFSEDGSYFVTSGNRHVKLWYLQIQSKY 199 (1080)
T ss_pred eEEEhhhhhhccccccccc-ceeE-----------------EEEEEccCCceeeeeeeeeEEEEEeeccccc
Confidence 7899999987654332221 1122 5689999999999865 9999999988755
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=98.80 E-value=3.9e-08 Score=94.56 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=90.1
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCCC-CEEEEEeCCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPVH-QLICVGTIEG 123 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~-~llasGs~DG 123 (358)
.+..+++|||||.+|+| +|+..|||||+....-++ ++.....-. ..-.+-|.|++|||.. .++|.||-..
T Consensus 159 taAhsL~Fs~DGeqlfa--GykrcirvFdt~RpGr~c------~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q 230 (406)
T KOG2919|consen 159 TAAHSLQFSPDGEQLFA--GYKRCIRVFDTSRPGRDC------PVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQ 230 (406)
T ss_pred hhheeEEecCCCCeEee--cccceEEEeeccCCCCCC------cchhhhhcccccccceeeeeeccCCCCcceeeecccc
Confidence 36789999999999976 589999999995432221 111100000 0001568999999975 4999999988
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
++-|+.--.+.++..|-+|...| +.|.|+++|++|+| .| .|-.||++.-+
T Consensus 231 ~~giy~~~~~~pl~llggh~gGv-----------------ThL~~~edGn~lfsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 231 RVGIYNDDGRRPLQLLGGHGGGV-----------------THLQWCEDGNKLFSGARKDDKILCWDIRYSR 284 (406)
T ss_pred eeeeEecCCCCceeeecccCCCe-----------------eeEEeccCcCeecccccCCCeEEEEeehhcc
Confidence 88887767788999999998887 78999999999998 36 99999997543
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.3e-08 Score=99.47 Aligned_cols=128 Identities=19% Similarity=0.197 Sum_probs=96.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee---eeee--ccCceEEEEEee-cCCCCCeeEEEEcCCCCEE
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK---FERC--FDSEVVTFEILS-DDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk---~~r~--~d~e~v~f~~LS-~D~s~~In~i~~np~~~ll 116 (358)
.|.-.+.||.+|||++++++. +-+++|-=|++.+..-. .++. ..++-..+. .+ .++...|.+++++|++.+|
T Consensus 140 ~H~~s~~~vals~d~~~~fsa-sk~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k-~~r~~h~keil~~avS~Dgkyl 217 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSA-SKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLK-ESRKGHVKEILTLAVSSDGKYL 217 (479)
T ss_pred cccCcceEEEeeccccceeec-CCCcceeeeehhcCcccccccccchhhhhccCCCC-cccccccceeEEEEEcCCCcEE
Confidence 367789999999999999754 56889999998764211 1120 000000000 11 1444789999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
|||+.|..|.|||.++.+++.++.+|-..| .+++|-.....|+| +| +||||+++.-
T Consensus 218 atgg~d~~v~Iw~~~t~ehv~~~~ghr~~V-----------------~~L~fr~gt~~lys~s~Drsvkvw~~~~~ 276 (479)
T KOG0299|consen 218 ATGGRDRHVQIWDCDTLEHVKVFKGHRGAV-----------------SSLAFRKGTSELYSASADRSVKVWSIDQL 276 (479)
T ss_pred EecCCCceEEEecCcccchhhcccccccce-----------------eeeeeecCccceeeeecCCceEEEehhHh
Confidence 999999999999999999999999998887 67888876666664 78 9999999743
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.4e-07 Score=91.74 Aligned_cols=122 Identities=12% Similarity=0.102 Sum_probs=97.3
Q ss_pred EEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
-++.|. |...|.+|+.+|+.. +++||+.|..-.||++.+...-+ .-..|.+.|.++.||-++.+|
T Consensus 56 S~~tF~~H~~svFavsl~P~~~-l~aTGGgDD~AflW~~~~ge~~~-------------eltgHKDSVt~~~FshdgtlL 121 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNN-LVATGGGDDLAFLWDISTGEFAG-------------ELTGHKDSVTCCSFSHDGTLL 121 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCc-eEEecCCCceEEEEEccCCccee-------------EecCCCCceEEEEEccCceEE
Confidence 456674 889999999999665 56888888899999998754221 113444789999999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|||+-+|.|.+|+..++.....|......+ .=+.|||-+..|+. .| .+=+|.+.++.
T Consensus 122 ATGdmsG~v~v~~~stg~~~~~~~~e~~di-----------------eWl~WHp~a~illAG~~DGsvWmw~ip~~~ 181 (399)
T KOG0296|consen 122 ATGDMSGKVLVFKVSTGGEQWKLDQEVEDI-----------------EWLKWHPRAHILLAGSTDGSVWMWQIPSQA 181 (399)
T ss_pred EecCCCccEEEEEcccCceEEEeecccCce-----------------EEEEecccccEEEeecCCCcEEEEECCCcc
Confidence 999999999999999999888887433333 34889998888874 57 99999998743
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-08 Score=95.83 Aligned_cols=83 Identities=28% Similarity=0.580 Sum_probs=63.7
Q ss_pred ccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 31 DIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 31 ~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..+-|+|+- +++|+ ++.|++-||++ |+||+++|++||||...++..- .++++ |+++||+++|+
T Consensus 240 slq~~~e~~--lknpG-v~gvrIRpD~K-IlATAGWD~RiRVyswrtl~pL-------AVLky------Hsagvn~vAfs 302 (323)
T KOG0322|consen 240 SLQIRKEIT--LKNPG-VSGVRIRPDGK-ILATAGWDHRIRVYSWRTLNPL-------AVLKY------HSAGVNAVAFS 302 (323)
T ss_pred cccccceEE--ecCCC-ccceEEccCCc-EEeecccCCcEEEEEeccCCch-------hhhhh------hhcceeEEEeC
Confidence 344455443 44565 88999999998 6688899999999999876320 11111 12689999999
Q ss_pred CCCCEEEEEeCCCeEEEEeC
Q psy2085 111 PVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~ 130 (358)
|+.+++|.||.|++|.+|++
T Consensus 303 pd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 303 PDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCCchhhhccCCceEEeeec
Confidence 99999999999999999986
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.3e-07 Score=88.08 Aligned_cols=136 Identities=13% Similarity=0.209 Sum_probs=89.7
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC--CCeeEEEEcCCCCEEEEEe-CC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--SELNSIAINPVHQLICVGT-IE 122 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--~~In~i~~np~~~llasGs-~D 122 (358)
.....+.|+|||++++++...+++|.+||+.....+++. +.....+.++.. .....|.++|+++.+.++. .+
T Consensus 175 ~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~-----~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~ 249 (330)
T PRK11028 175 AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIEC-----VQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTA 249 (330)
T ss_pred CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEE-----EEEEecCCCcCCCCccceeEEECCCCCEEEEecCCC
Confidence 345789999999999888777899999999742111110 001111111111 1234689999999777765 47
Q ss_pred CeEEEEeCCCCce----eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECC--CCc--
Q psy2085 123 GKVEAWDPRMKVK----AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKE--IKK-- 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~----i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~--tG~-- 190 (358)
++|.+||+..... ++.+.....+ ..+.|+|+|++|+++ + +|.||+++ +|.
T Consensus 250 ~~I~v~~i~~~~~~~~~~~~~~~~~~p------------------~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~ 311 (330)
T PRK11028 250 SLISVFSVSEDGSVLSFEGHQPTETQP------------------RGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLT 311 (330)
T ss_pred CeEEEEEEeCCCCeEEEeEEEeccccC------------------CceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEE
Confidence 9999999865432 2332222111 679999999999852 5 99999764 554
Q ss_pred ---EEecCCCCCccccc
Q psy2085 191 ---TYNLGPAPKWCGFL 204 (358)
Q Consensus 191 ---~y~lgpap~Wcsfl 204 (358)
++..|+-|.|+.||
T Consensus 312 ~~~~~~~g~~P~~~~~~ 328 (330)
T PRK11028 312 ELGRYAVGQGPMWVSVL 328 (330)
T ss_pred EccccccCCCceEEEEE
Confidence 23679999999885
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-08 Score=100.86 Aligned_cols=163 Identities=10% Similarity=0.067 Sum_probs=98.3
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-e-
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-F- 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~- 82 (358)
..+.|+|-++..|+ ...+ - ...| --++|.+.+.+++|+|+.+-+++||+-|+.|.|||+.-..++ +
T Consensus 115 lVsasGDsT~r~Wdvk~s~-l------~G~~----~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e 183 (720)
T KOG0321|consen 115 LVSASGDSTIRPWDVKTSR-L------VGGR----LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALE 183 (720)
T ss_pred EEEccCCceeeeeeeccce-e------ecce----eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHH
Confidence 45788999999999 2111 0 0011 135788999999999999999999999999999998743321 1
Q ss_pred -------eeeccCc--e--E-----EEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCC-
Q psy2085 83 -------ERCFDSE--V--V-----TFEILSDDYSSELNSIAINPVHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFN- 144 (358)
Q Consensus 83 -------~r~~d~e--~--v-----~f~~LS~D~s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~- 144 (358)
.+|..+. . . .-..-+.+..+.|+++.| .|..+||++|. ||+|++||+|...+.........
T Consensus 184 ~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~f-kDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~ 262 (720)
T KOG0321|consen 184 EFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLF-KDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSD 262 (720)
T ss_pred HHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEE-eccceeeeccCCCcceEEEeecccccccccCCCccc
Confidence 1121110 0 0 000000011145666666 45556666666 99999999999887654432110
Q ss_pred cc-ccccCCCccccccCCCceeeEEcCCCCEEE-E-ec-ceEEEECCC
Q psy2085 145 CI-SNERDTEEKEGKASSDESSEEEEEEEEEEE-S-SD-DDQAWTKEI 188 (358)
Q Consensus 145 ~v-~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-aD-~IKIWD~~t 188 (358)
.. +... |+..-.++.....|.+|+ + .| .|..||+.+
T Consensus 263 ~~~t~sk--------rs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s 302 (720)
T KOG0321|consen 263 KYPTHSK--------RSVGQVNLILDSSGTYLFASCTDNSIYFYNMRS 302 (720)
T ss_pred CccCccc--------ceeeeEEEEecCCCCeEEEEecCCcEEEEeccc
Confidence 00 0000 000004566666778877 3 69 999999975
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=4e-08 Score=94.86 Aligned_cols=125 Identities=15% Similarity=0.215 Sum_probs=91.4
Q ss_pred eEEEEee-CCCCEeEEEEcCC-CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCC
Q psy2085 37 ELIQDFE-MPGVSTSVRISPD-GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVH 113 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpD-G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~ 113 (358)
.+++.|. +|+.++.|+|..+ +-..+.+|+.||.||+||++....+-. ..+ ..++ ...+|++.|-.+
T Consensus 61 ~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~-------~~~----~~~~~~~f~~ld~nck~ 129 (376)
T KOG1188|consen 61 QLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR-------ISW----TQQSGTPFICLDLNCKK 129 (376)
T ss_pred hhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh-------eec----cCCCCCcceEeeccCcC
Confidence 4566664 6788999999884 555667888899999999985322111 001 0111 356888998889
Q ss_pred CEEEEEeC----CCeEEEEeCCCCce-eEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEE
Q psy2085 114 QLICVGTI----EGKVEAWDPRMKVK-AGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQA 183 (358)
Q Consensus 114 ~llasGs~----DGtV~iWD~Rs~~~-i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKI 183 (358)
+++++|++ |-.|-+||.|..+. ++.+. .|.+.| ++|.|||+.. +|+| .| -|.|
T Consensus 130 ~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDV-----------------T~lrFHP~~pnlLlSGSvDGLvnl 192 (376)
T KOG1188|consen 130 NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDV-----------------TQLRFHPSDPNLLLSGSVDGLVNL 192 (376)
T ss_pred CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcc-----------------eeEEecCCCCCeEEeecccceEEe
Confidence 99999975 78899999999877 77664 566665 8899999765 5665 68 9999
Q ss_pred EECCCC
Q psy2085 184 WTKEIK 189 (358)
Q Consensus 184 WD~~tG 189 (358)
+|++.-
T Consensus 193 fD~~~d 198 (376)
T KOG1188|consen 193 FDTKKD 198 (376)
T ss_pred eecCCC
Confidence 999743
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=3e-08 Score=100.34 Aligned_cols=87 Identities=18% Similarity=0.281 Sum_probs=70.6
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
+.++..+|||||+|| |+-+.|+.+||||...+.+. ... ..|=++..||+||||+.+|++||+|--|
T Consensus 291 g~in~f~FS~DG~~L-A~VSqDGfLRvF~fdt~eLl--g~m-----------kSYFGGLLCvcWSPDGKyIvtGGEDDLV 356 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYL-ATVSQDGFLRIFDFDTQELL--GVM-----------KSYFGGLLCVCWSPDGKYIVTGGEDDLV 356 (636)
T ss_pred ccccceeEcCCCceE-EEEecCceEEEeeccHHHHH--HHH-----------HhhccceEEEEEcCCccEEEecCCcceE
Confidence 579999999999998 45578999999998864321 000 1122789999999999999999999999
Q ss_pred EEEeCCCCceeEEEeCCCCcc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v 146 (358)
.+|.+..++.|+.=.+|.+-|
T Consensus 357 tVwSf~erRVVARGqGHkSWV 377 (636)
T KOG2394|consen 357 TVWSFEERRVVARGQGHKSWV 377 (636)
T ss_pred EEEEeccceEEEeccccccce
Confidence 999999999888877777655
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.6e-07 Score=90.03 Aligned_cols=112 Identities=14% Similarity=0.155 Sum_probs=80.7
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCC--EEEEEEecCCeEEEEEcCCCc-ee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQ--YVLSTGIYKPRVRCYETDNLS-MK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~--~LlatG~~d~~IrvwDl~~ls-lk 81 (358)
|.-|+|.|-++...+ .++|+++---+.|.+.|+++.|+++-. +|+ +|+.||+|-+|++..-. ++
T Consensus 55 ~~aSGssDetI~IYD------------m~k~~qlg~ll~HagsitaL~F~~~~S~shLl-S~sdDG~i~iw~~~~W~~~~ 121 (362)
T KOG0294|consen 55 YVASGSSDETIHIYD------------MRKRKQLGILLSHAGSITALKFYPPLSKSHLL-SGSDDGHIIIWRVGSWELLK 121 (362)
T ss_pred eEeccCCCCcEEEEe------------ccchhhhcceeccccceEEEEecCCcchhhee-eecCCCcEEEEEcCCeEEee
Confidence 555555555555444 334445444456789999999999875 675 57789999999987521 11
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
..+ .+++.||.|+++|.+.|-.+-|.|++++.|++-.|+...+++...
T Consensus 122 slK--------------~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~ 169 (362)
T KOG0294|consen 122 SLK--------------AHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKN 169 (362)
T ss_pred eec--------------ccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCC
Confidence 111 122679999999999999999999999999999998877776543
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.3e-08 Score=99.45 Aligned_cols=139 Identities=20% Similarity=0.229 Sum_probs=112.6
Q ss_pred eEEEEeecCCceeeee---eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV---IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~---~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.-||+--+|+.++.|+ ..++|.|+.. +..+.||.+|+||..|. ||+-|.+|||||+.+..
T Consensus 522 kvcFsccsdGnI~vwDLhnq~~VrqfqGh---------------tDGascIdis~dGtklW-TGGlDntvRcWDlregr- 584 (705)
T KOG0639|consen 522 KVCFSCCSDGNIAVWDLHNQTLVRQFQGH---------------TDGASCIDISKDGTKLW-TGGLDNTVRCWDLREGR- 584 (705)
T ss_pred ceeeeeccCCcEEEEEcccceeeecccCC---------------CCCceeEEecCCCceee-cCCCccceeehhhhhhh-
Confidence 3588999999999999 4667666554 46899999999999885 67789999999998742
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
+.. ..|+++.|-++..+|++..||.|-+++.|++--. ++..-..|..|.+.|
T Consensus 585 qlq-------------qhdF~SQIfSLg~cP~~dWlavGMens~vevlh~-skp~kyqlhlheScV-------------- 636 (705)
T KOG0639|consen 585 QLQ-------------QHDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHT-SKPEKYQLHLHESCV-------------- 636 (705)
T ss_pred hhh-------------hhhhhhhheecccCCCccceeeecccCcEEEEec-CCccceeecccccEE--------------
Confidence 111 1234477899999999999999999999999876 444456777788887
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|.|.+-|++++| .| .+..|..--|.
T Consensus 637 ---LSlKFa~cGkwfvStGkDnlLnawrtPyGa 666 (705)
T KOG0639|consen 637 ---LSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 666 (705)
T ss_pred ---EEEEecccCceeeecCchhhhhhccCcccc
Confidence 88999999999998 57 99999887665
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.6e-07 Score=84.53 Aligned_cols=154 Identities=16% Similarity=0.186 Sum_probs=103.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce---
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM--- 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl--- 80 (358)
.|.+-++..++++-.- .+-.++...+-.....+.-.--|.+.++.++|..+ +|++.| ||.|+=|.+++...
T Consensus 23 ~~l~agn~~G~iav~s--l~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~--~Lls~g--dG~V~gw~W~E~~es~~ 96 (325)
T KOG0649|consen 23 QYLFAGNLFGDIAVLS--LKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDD--FLLSGG--DGLVYGWEWNEEEESLA 96 (325)
T ss_pred eEEEEecCCCeEEEEE--ehhhhccccCCCCCcceeeccccCCCeeeeeeehh--heeecc--CceEEEeeehhhhhhcc
Confidence 5667777777755443 11112222222233333333347889999999944 566655 59999999986421
Q ss_pred -e--ee----eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCC
Q psy2085 81 -K--FE----RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTE 153 (358)
Q Consensus 81 -k--~~----r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~ 153 (358)
| ++ .+.++-.| ..||++.+.|..+-+.+++-||.+..||+.+|+.-.++.+|.+-+
T Consensus 97 ~K~lwe~~~P~~~~~~ev----------PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYv------- 159 (325)
T KOG0649|consen 97 TKRLWEVKIPMQVDAVEV----------PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYV------- 159 (325)
T ss_pred chhhhhhcCccccCcccC----------CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCccee-------
Confidence 1 11 11111101 679999999987766666789999999999999999999998876
Q ss_pred ccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.--.....|+| -| +++|||.+|++
T Consensus 160 ----------H~vv~R~~~~qilsG~EDGtvRvWd~kt~k 189 (325)
T KOG0649|consen 160 ----------HSVVGRNANGQILSGAEDGTVRVWDTKTQK 189 (325)
T ss_pred ----------eeeeecccCcceeecCCCccEEEEeccccc
Confidence 55655333456776 47 99999999998
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.1e-07 Score=82.81 Aligned_cols=113 Identities=16% Similarity=0.209 Sum_probs=76.8
Q ss_pred CEeEEEEcCCCCEEEEEEe---------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGI---------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~---------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
.--.+.|+|+|++|++... |-+...||.++.... ....+.-+..+.|.+++|+|++..||
T Consensus 7 ~~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~-----------~~~~i~l~~~~~I~~~~WsP~g~~fa 75 (194)
T PF08662_consen 7 DDAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNI-----------PVESIELKKEGPIHDVAWSPNGNEFA 75 (194)
T ss_pred ceEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCC-----------ccceeeccCCCceEEEEECcCCCEEE
Confidence 3457889999999987654 334455666543211 11112212225699999999998654
Q ss_pred E--EeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec------ceEEEECCCC
Q psy2085 118 V--GTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD------DDQAWTKEIK 189 (358)
Q Consensus 118 s--Gs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD------~IKIWD~~tG 189 (358)
+ |..++.|.+||++ .+.+..+.. ... +.|.|+|+|++|+.+. .|.|||.++.
T Consensus 76 vi~g~~~~~v~lyd~~-~~~i~~~~~--~~~-----------------n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~ 135 (194)
T PF08662_consen 76 VIYGSMPAKVTLYDVK-GKKIFSFGT--QPR-----------------NTISWSPDGRFLVLAGFGNLNGDLEFWDVRKK 135 (194)
T ss_pred EEEccCCcccEEEcCc-ccEeEeecC--CCc-----------------eEEEECCCCCEEEEEEccCCCcEEEEEECCCC
Confidence 4 4567899999996 555666642 222 7799999999998642 5999999977
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 136 ~ 136 (194)
T PF08662_consen 136 K 136 (194)
T ss_pred E
Confidence 6
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.9e-08 Score=99.08 Aligned_cols=131 Identities=12% Similarity=0.228 Sum_probs=99.7
Q ss_pred CCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeE
Q psy2085 28 PTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNS 106 (358)
Q Consensus 28 ~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~ 106 (358)
.+..+-+|+++-+.++ |.+.|||+.|+.||.+| ++|++|-++.|||.-...+ ...++.+|+..|-|
T Consensus 32 ~~s~~lrrL~lE~eL~GH~GCVN~LeWn~dG~lL-~SGSDD~r~ivWd~~~~Kl------------lhsI~TgHtaNIFs 98 (758)
T KOG1310|consen 32 GNSTWLRRLDLEAELTGHTGCVNCLEWNADGELL-ASGSDDTRLIVWDPFEYKL------------LHSISTGHTANIFS 98 (758)
T ss_pred cccHHHhhcchhhhhccccceecceeecCCCCEE-eecCCcceEEeecchhcce------------eeeeecccccceeE
Confidence 4556778899999986 99999999999999976 7899999999999864321 22345666688999
Q ss_pred EEEcCC--CCEEEEEeCCCeEEEEeCCCCce----------eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 107 IAINPV--HQLICVGTIEGKVEAWDPRMKVK----------AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 107 i~~np~--~~llasGs~DGtV~iWD~Rs~~~----------i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
+.|-|. +.+++||..|..|+++|+.+-+. .....+|...+ +.|+-.|++..
T Consensus 99 vKFvP~tnnriv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rV-----------------Kria~~p~~Ph 161 (758)
T KOG1310|consen 99 VKFVPYTNNRIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRV-----------------KRIATAPNGPH 161 (758)
T ss_pred EeeeccCCCeEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhh-----------------hheecCCCCCc
Confidence 999885 56999999999999999975322 22233444433 78888888844
Q ss_pred -EEE--ec-ceEEEECCC
Q psy2085 175 -EES--SD-DDQAWTKEI 188 (358)
Q Consensus 175 -llS--aD-~IKIWD~~t 188 (358)
+.| -| +|+-+|++.
T Consensus 162 tfwsasEDGtirQyDiRE 179 (758)
T KOG1310|consen 162 TFWSASEDGTIRQYDIRE 179 (758)
T ss_pred eEEEecCCcceeeecccC
Confidence 445 47 999999975
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.2e-07 Score=91.56 Aligned_cols=126 Identities=16% Similarity=0.266 Sum_probs=89.3
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce--------------eeeeeccC--ceEE-EEEeecC------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM--------------KFERCFDS--EVVT-FEILSDD------ 99 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl--------------k~~r~~d~--e~v~-f~~LS~D------ 99 (358)
++...|.++.|||||++|++.|. + ..+||++++... .|....|. +.+. +....|.
T Consensus 184 ~~~~eV~DL~FS~dgk~lasig~-d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 184 AHHAEVKDLDFSPDGKFLASIGA-D-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred hhcCccccceeCCCCcEEEEecC-C-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 46788999999999999987775 3 899999987510 01111121 1111 1111111
Q ss_pred ----CC--------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccccccC
Q psy2085 100 ----YS--------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 100 ----~s--------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs 160 (358)
|+ ..|.+++++++|.++|.|+.||.|-+.+..+-+++.... .|...|
T Consensus 262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~V-------------- 327 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFV-------------- 327 (398)
T ss_pred EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeee--------------
Confidence 00 489999999999999999999999999998877776554 455555
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
+.|.|+|+.+.+++ +| .+.|--+.
T Consensus 328 ---T~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 328 ---TGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred ---eeEEEcCCcCcccccccCCceeEEEEe
Confidence 78999999999885 67 66666554
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=8.5e-08 Score=90.11 Aligned_cols=68 Identities=10% Similarity=0.160 Sum_probs=62.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD 179 (358)
.+|+.+.+-|++.++||+|+||.|+++.-|+.+++++|.-|...+ ++++|||+...+++ .|
T Consensus 252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagv-----------------n~vAfspd~~lmAaaskD 314 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGV-----------------NAVAFSPDCELMAAASKD 314 (323)
T ss_pred CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcce-----------------eEEEeCCCCchhhhccCC
Confidence 689999999999999999999999999999999999999888766 89999999888874 68
Q ss_pred -ceEEEEC
Q psy2085 180 -DDQAWTK 186 (358)
Q Consensus 180 -~IKIWD~ 186 (358)
.|-+|++
T Consensus 315 ~rISLWkL 322 (323)
T KOG0322|consen 315 ARISLWKL 322 (323)
T ss_pred ceEEeeec
Confidence 9999986
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.7e-06 Score=80.77 Aligned_cols=144 Identities=20% Similarity=0.263 Sum_probs=100.3
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeC-C-CCEeEEEE-cCCCC-EEEEEEecCCeEEEEEcCC-Cc
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEM-P-GVSTSVRI-SPDGQ-YVLSTGIYKPRVRCYETDN-LS 79 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~-~-~~v~~v~~-SpDG~-~LlatG~~d~~IrvwDl~~-ls 79 (358)
+....+.+..+..|...... ..+..+.. . ..+..+.+ ++++. +++.++..++.+++||+.. ..
T Consensus 79 ~~~~~~~d~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 146 (466)
T COG2319 79 LLLSGSSDGTIKLWDLDNGE------------KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK 146 (466)
T ss_pred EEEEecCCCcEEEEEcCCCc------------eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCe
Confidence 45556677888888832221 22233322 2 24666666 89998 4444444488999999985 21
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
... .. ..+...|++++|+|++..+++++. |+++++||++.+..+..+.+|...+
T Consensus 147 ~~~----------~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v------------ 201 (466)
T COG2319 147 LIR----------TL---EGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPV------------ 201 (466)
T ss_pred EEE----------EE---ecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCce------------
Confidence 110 00 011157889999999998888886 9999999999988888898877666
Q ss_pred cCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+|++. .+++ .| .|++||..++.
T Consensus 202 -----~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~ 232 (466)
T COG2319 202 -----SSLAFSPDGGLLIASGSSDGTIRLWDLSTGK 232 (466)
T ss_pred -----EEEEEcCCcceEEEEecCCCcEEEEECCCCc
Confidence 7899999998 5555 46 99999988666
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.3e-07 Score=92.11 Aligned_cols=148 Identities=11% Similarity=0.137 Sum_probs=98.1
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
+.|+|.|+++..|+-... +++..|+ |.+.|+.|+++. + .++++ +.|.+|+.|-....-++ ..
T Consensus 82 ~aSGs~DG~VkiWnlsqR-------------~~~~~f~AH~G~V~Gi~v~~-~-~~~tv-gdDKtvK~wk~~~~p~~-ti 144 (433)
T KOG0268|consen 82 VASGSCDGEVKIWNLSQR-------------ECIRTFKAHEGLVRGICVTQ-T-SFFTV-GDDKTVKQWKIDGPPLH-TI 144 (433)
T ss_pred hhccccCceEEEEehhhh-------------hhhheeecccCceeeEEecc-c-ceEEe-cCCcceeeeeccCCcce-ee
Confidence 678999999999992222 3444554 667899999988 3 34444 46789999985432110 00
Q ss_pred eccC------------------ceEEEEEeec---------CCC-CCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce
Q psy2085 85 CFDS------------------EVVTFEILSD---------DYS-SELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 85 ~~d~------------------e~v~f~~LS~---------D~s-~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
+.++ +.+. +... .|. +.|.+|.|||. -.+|++|++|+.|-++|+|++++
T Consensus 145 lg~s~~~gIdh~~~~~~FaTcGe~i~--IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~P 222 (433)
T KOG0268|consen 145 LGKSVYLGIDHHRKNSVFATCGEQID--IWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASP 222 (433)
T ss_pred eccccccccccccccccccccCceee--ecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCc
Confidence 0000 1111 1111 011 67999999997 46899999999999999999999
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+..+-..-.+ +.|+|+|.+-.++++ | .+..+|++.-+
T Consensus 223 l~KVi~~mRT------------------N~IswnPeafnF~~a~ED~nlY~~DmR~l~ 262 (433)
T KOG0268|consen 223 LKKVILTMRT------------------NTICWNPEAFNFVAANEDHNLYTYDMRNLS 262 (433)
T ss_pred cceeeeeccc------------------cceecCccccceeeccccccceehhhhhhc
Confidence 8766543322 789999955444444 5 88899987544
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.5e-07 Score=87.97 Aligned_cols=155 Identities=15% Similarity=0.173 Sum_probs=104.4
Q ss_pred eEEEEeecCCc----eeeee-eccCcccCCCcccccceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 4 EYCYQTNWHKQ----AVTLV-IIGGRYLLPTNDIRRRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 4 ~~~~~~~~~~~----~~~~~-~~~~r~lk~d~~~~~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
+=||...++-+ |..|. +.-++. .-..-.|++..++ .-+.++||.|-|++..|++- .++.|.+|++.
T Consensus 80 aT~yn~~s~s~vl~~aaiw~ipe~~~~-----S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm--~dn~i~l~~l~ 152 (370)
T KOG1007|consen 80 ATVYNDTSDSGVLTGAAIWQIPEPLGQ-----SNSSTLECVASLDTEAVGKINCVEWEPNSDKLASM--DDNNIVLWSLD 152 (370)
T ss_pred EEEEeccCCCcceeeEEEEecccccCc-----cccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEe--ccCceEEEEcc
Confidence 45777666653 77888 433332 1123345555554 44679999999999998654 48899999998
Q ss_pred CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC--CEEEEEeCCCeEEEEeCCCCceeEEEeC-CCCccccccCCC
Q psy2085 77 NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH--QLICVGTIEGKVEAWDPRMKVKAGTLDC-AFNCISNERDTE 153 (358)
Q Consensus 77 ~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~--~llasGs~DGtV~iWD~Rs~~~i~~L~~-~~~~v~~~~~i~ 153 (358)
+.+-.. +++. ...|..+.....+-+|||.| +.+++ ..|+++.+||.|+.++...|.. |.+-+
T Consensus 153 ess~~v-----aev~--ss~s~e~~~~ftsg~WspHHdgnqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~v------- 217 (370)
T KOG1007|consen 153 ESSKIV-----AEVL--SSESAEMRHSFTSGAWSPHHDGNQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRV------- 217 (370)
T ss_pred cCcchh-----eeec--ccccccccceecccccCCCCccceEEE-eCCCcEEEEEccchhhhcchhhhhccee-------
Confidence 754211 1111 01122233456788999954 46776 5689999999999998877763 44444
Q ss_pred ccccccCCCceeeEEcCCCCEEE-Ee-c--ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEE-SS-D--DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~ll-Sa-D--~IKIWD~~tG~ 190 (358)
.++.|+|+-+.++ |+ | -|||||.+.-+
T Consensus 218 ----------rdlDfNpnkq~~lvt~gDdgyvriWD~R~tk 248 (370)
T KOG1007|consen 218 ----------RDLDFNPNKQHILVTCGDDGYVRIWDTRKTK 248 (370)
T ss_pred ----------eeccCCCCceEEEEEcCCCccEEEEeccCCC
Confidence 7899999988765 54 4 99999998755
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=5e-07 Score=91.98 Aligned_cols=111 Identities=20% Similarity=0.271 Sum_probs=85.6
Q ss_pred CCCCEeEEEEcCCCCEEEEE-EecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-
Q psy2085 44 MPGVSTSVRISPDGQYVLST-GIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI- 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~Llat-G~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~- 121 (358)
-.+.|.++.|+|+|+-.+++ |=.+-.|.|||++-. . +.+| . .+.=|++-|||.+++|+.+|-
T Consensus 269 k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~-~---------v~df---~---egpRN~~~fnp~g~ii~lAGFG 332 (566)
T KOG2315|consen 269 KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK-P---------VFDF---P---EGPRNTAFFNPHGNIILLAGFG 332 (566)
T ss_pred CCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC-E---------eEeC---C---CCCccceEECCCCCEEEEeecC
Confidence 35789999999999755444 544558999998731 1 1111 1 156799999999998877765
Q ss_pred --CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--------c-ceEEEECCCCc
Q psy2085 122 --EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--------D-DDQAWTKEIKK 190 (358)
Q Consensus 122 --DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--------D-~IKIWD~~tG~ 190 (358)
-|.|+|||..+++++..+.+.... -..|+|||++++++ | .+|||+.. |.
T Consensus 333 NL~G~mEvwDv~n~K~i~~~~a~~tt-------------------~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~ 392 (566)
T KOG2315|consen 333 NLPGDMEVWDVPNRKLIAKFKAANTT-------------------VFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GS 392 (566)
T ss_pred CCCCceEEEeccchhhccccccCCce-------------------EEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cc
Confidence 599999999999999999876653 38999999999962 7 99999985 66
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.5e-07 Score=86.80 Aligned_cols=118 Identities=12% Similarity=0.118 Sum_probs=81.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEE-cCC-CCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAI-NPV-HQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~-np~-~~llasGs~ 121 (358)
|...|.||.|.+-|+.+ |||+.|.+|+|||....+-.+...- . .. -+.+.|-.|.| +|. |+.+|+++.
T Consensus 12 h~DlihdVs~D~~GRRm-AtCSsDq~vkI~d~~~~s~~W~~Ts--~-Wr------ah~~Si~rV~WAhPEfGqvvA~cS~ 81 (361)
T KOG2445|consen 12 HKDLIHDVSFDFYGRRM-ATCSSDQTVKIWDSTSDSGTWSCTS--S-WR------AHDGSIWRVVWAHPEFGQVVATCSY 81 (361)
T ss_pred CcceeeeeeecccCcee-eeccCCCcEEEEeccCCCCceEEee--e-EE------ecCCcEEEEEecCccccceEEEEec
Confidence 55679999999999986 7888999999999865544443211 0 00 01156778888 454 899999999
Q ss_pred CCeEEEEeCCCC---------ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECC
Q psy2085 122 EGKVEAWDPRMK---------VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~---------~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~ 187 (358)
|++|.||.-... ....+|....+.+ ++|.|.|. |=+|++ +| ++||++.-
T Consensus 82 Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV-----------------~DV~FaP~hlGLklA~~~aDG~lRIYEA~ 144 (361)
T KOG2445|consen 82 DRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSV-----------------TDVKFAPKHLGLKLAAASADGILRIYEAP 144 (361)
T ss_pred CCceeeeeecccccccccceeEEEEEeecCCcce-----------------eEEEecchhcceEEEEeccCcEEEEEecC
Confidence 999999975211 0123443333333 78999986 335554 78 99999885
Q ss_pred C
Q psy2085 188 I 188 (358)
Q Consensus 188 t 188 (358)
+
T Consensus 145 d 145 (361)
T KOG2445|consen 145 D 145 (361)
T ss_pred C
Confidence 4
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.7e-07 Score=94.59 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=30.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
|.+.|.||...|.|++| |+|+.||+||||++.+.
T Consensus 399 Htg~Vr~iSvdp~G~wl-asGsdDGtvriWEi~Tg 432 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWL-ASGSDDGTVRIWEIATG 432 (733)
T ss_pred cCCeEEEEEecCCccee-eecCCCCcEEEEEeecc
Confidence 66789999999999997 78999999999999875
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.5e-08 Score=96.81 Aligned_cols=132 Identities=16% Similarity=0.186 Sum_probs=85.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc----------eeeee-eccCceEEEE--------EeecC-----
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS----------MKFER-CFDSEVVTFE--------ILSDD----- 99 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls----------lk~~r-~~d~e~v~f~--------~LS~D----- 99 (358)
|.+++.|-+|+|||.-|+++| .||.|++|.=..+- ..+-+ ..+++.+-|| .|.++
T Consensus 103 H~~A~~~gRW~~dGtgLlt~G-EDG~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~ 181 (737)
T KOG1524|consen 103 HAAAISSGRWSPDGAGLLTAG-EDGVIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIR 181 (737)
T ss_pred hhhhhhhcccCCCCceeeeec-CCceEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeE
Confidence 667899999999999887665 69999999855431 11111 1122222221 11111
Q ss_pred ---CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCccc--cc----cCCCc-----e
Q psy2085 100 ---YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKE--GK----ASSDE-----S 164 (358)
Q Consensus 100 ---~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~--Gt----Rs~~P-----~ 164 (358)
|.+-|.+|+|||..+++++||+|-.-++||. -|..+.+-..|..++++ .+.++.+. |+ |-..| .
T Consensus 182 WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSif 260 (737)
T KOG1524|consen 182 WRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIF 260 (737)
T ss_pred EeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccccceeeeeeeeeeecCCCccceE
Confidence 1167999999999999999999999999996 45555555566666643 23333211 33 54444 6
Q ss_pred eeEEcCCCCEEEE
Q psy2085 165 SEEEEEEEEEEES 177 (358)
Q Consensus 165 sI~fs~d~~~llS 177 (358)
.|+||+||..++.
T Consensus 261 nlsWS~DGTQ~a~ 273 (737)
T KOG1524|consen 261 NLSWSADGTQATC 273 (737)
T ss_pred EEEEcCCCceeec
Confidence 6777777777764
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=3.1e-07 Score=90.22 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=85.0
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce----e---eeeecc-CceEEEEEe-------e-cCC------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM----K---FERCFD-SEVVTFEIL-------S-DDY------ 100 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl----k---~~r~~d-~e~v~f~~L-------S-~D~------ 100 (358)
+|.+.|+.+.||.+|+|| ++|+.|..++||.+.++-. | ...|.+ +.+....+- | ..|
T Consensus 54 ~H~GCiNAlqFS~N~~~L-~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFL-ASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH 132 (609)
T ss_pred hhccccceeeeccCCeEE-eecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence 688999999999999998 6778899999999976411 1 111111 112111110 0 001
Q ss_pred ----------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC-CCCccccccCCCccccccCCCc
Q psy2085 101 ----------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC-AFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 101 ----------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~-~~~~v~~~~~i~gl~GtRs~~P 163 (358)
.+.|..++.+|..++|++.+.+|.|.+||.|.+..-..+-+ +..+-. |
T Consensus 133 DiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~--F------------- 197 (609)
T KOG4227|consen 133 DIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKN--F------------- 197 (609)
T ss_pred ecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcc--c-------------
Confidence 15778888888888888888888888888887763222222 221110 1
Q ss_pred eeeEEcCCCCEEE-Eec---ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEE-SSD---DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~ll-SaD---~IKIWD~~tG~ 190 (358)
.++.|+|....|+ ++. .+.+||.+...
T Consensus 198 ~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 198 YTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred eeeeecCCCceeEEeccccCCCCceeecccc
Confidence 7899999887665 433 89999997544
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=2e-07 Score=96.02 Aligned_cols=153 Identities=16% Similarity=0.142 Sum_probs=108.5
Q ss_pred EeecCCceeeee-e---ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCceee
Q psy2085 8 QTNWHKQAVTLV-I---IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSMKF 82 (358)
Q Consensus 8 ~~~~~~~~~~~~-~---~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lslk~ 82 (358)
..|++..|.-|. + -.+=-|..-..-.++|-+|. .|...|..+.|||=...|+|||+.|..|+||.+. .++.+.
T Consensus 40 ~aS~~flAFn~e~~G~~lgvlPl~~~Gr~~r~i~~l~--~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~L 117 (1012)
T KOG1445|consen 40 HASADFLAFNIEGEGGKLGVLPLTAKGRRTRDIGILA--AHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHSQKL 117 (1012)
T ss_pred ccccceEEEeecCCCceEEEEeccccCccccccceee--cccceeeccCccccchhhhhcccCCCeeEEEecCCCccccc
Confidence 456667777776 2 11111222222234556664 3778899999999777789999999999999998 333322
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
. +.++ ++++.- -.|.|+.|+|. .+++++ +..|+|.+||+.+++.+..+.+|...+
T Consensus 118 S---ape~----~~g~~~-~~vE~l~fHpTaDgil~s-~a~g~v~i~D~stqk~~~el~~h~d~v--------------- 173 (1012)
T KOG1445|consen 118 S---APEI----DVGGGN-VIVECLRFHPTADGILAS-GAHGSVYITDISTQKTAVELSGHTDKV--------------- 173 (1012)
T ss_pred C---Ccce----eecCCc-eEEEEeecccCcCceEEe-ccCceEEEEEcccCceeecccCCchhh---------------
Confidence 0 1111 112111 35889999997 457776 557999999999999999999998877
Q ss_pred CceeeEEcCCCCEEEEe--c-ceEEEECCC
Q psy2085 162 DESSEEEEEEEEEEESS--D-DDQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llSa--D-~IKIWD~~t 188 (358)
.+..|+.||..|+++ | .|+|+|.+.
T Consensus 174 --QSa~WseDG~llatscKdkqirifDPRa 201 (1012)
T KOG1445|consen 174 --QSADWSEDGKLLATSCKDKQIRIFDPRA 201 (1012)
T ss_pred --hccccccCCceEeeecCCcceEEeCCcc
Confidence 788999999999975 5 999999975
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=6e-07 Score=90.40 Aligned_cols=157 Identities=18% Similarity=0.184 Sum_probs=113.6
Q ss_pred eEEEEeecCCceeeee-e--ccCcccCCCcc------cccce----------eEE----------EEeeCC--CCEeEEE
Q psy2085 4 EYCYQTNWHKQAVTLV-I--IGGRYLLPTND------IRRRI----------ELI----------QDFEMP--GVSTSVR 52 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~--~~~r~lk~d~~------~~~rI----------eli----------qdfe~~--~~v~~v~ 52 (358)
-|.+++.....+..|+ . ---|+||.+.. |...= ++| ..|.++ ..|.-++
T Consensus 92 ~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ 171 (673)
T KOG4378|consen 92 LYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLR 171 (673)
T ss_pred eeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEee
Confidence 4888888889999999 2 22355665542 11111 111 134444 3567889
Q ss_pred EcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCC
Q psy2085 53 ISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPR 131 (358)
Q Consensus 53 ~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~R 131 (358)
+||-.++|+++.+++|.|.+||+..++.++.- +.-|+.+...|||+|.+. ||++-|-|..|.++|.+
T Consensus 172 ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~------------~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 172 YSPSKRFLLSIASDKGAVTLWDVQGMSPIFHA------------SEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred cccccceeeEeeccCCeEEEEeccCCCcccch------------hhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 99999999999999999999999987655421 112335678899999865 88999999999999999
Q ss_pred CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++....+|.- .++. .+|+|+++|.+|+. +- .|..||++.-+
T Consensus 240 s~~s~~~l~y-~~Pl-----------------stvaf~~~G~~L~aG~s~G~~i~YD~R~~k 283 (673)
T KOG4378|consen 240 SQASTDRLTY-SHPL-----------------STVAFSECGTYLCAGNSKGELIAYDMRSTK 283 (673)
T ss_pred cccccceeee-cCCc-----------------ceeeecCCceEEEeecCCceEEEEecccCC
Confidence 9988777753 2233 67999999998885 33 88899998544
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.9e-06 Score=79.68 Aligned_cols=143 Identities=11% Similarity=0.033 Sum_probs=102.9
Q ss_pred EEEeecCCceeeee---eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 6 CYQTNWHKQAVTLV---IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~---~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.-|+|+|+++.-|+ .+.++-|-+|-.-.. + ...+|..|++.|.|+. +++|-.|..+.+||+....+..
T Consensus 197 ~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g-------l-essavaav~vdpsgrl-l~sg~~dssc~lydirg~r~iq 267 (350)
T KOG0641|consen 197 FASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG-------L-ESSAVAAVAVDPSGRL-LASGHADSSCMLYDIRGGRMIQ 267 (350)
T ss_pred EEccCCCceEEEEeeeccceeeeccCcccCCC-------c-ccceeEEEEECCCcce-eeeccCCCceEEEEeeCCceee
Confidence 45789999999999 566766655442110 0 1357899999999985 5899999999999998765543
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC----ceeEEEeCCCCccccccCCCccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK----VKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~----~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
..|.+ +..|.||.|+|...++.+|+.|..|++=|+.-. -++.++.-|.+.+
T Consensus 268 ~f~ph-------------sadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~------------ 322 (350)
T KOG0641|consen 268 RFHPH-------------SADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKA------------ 322 (350)
T ss_pred eeCCC-------------ccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCce------------
Confidence 33322 257999999999999999999999999997532 1223333343332
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
..+.|||+.--++| +| ++.+|-..
T Consensus 323 -----i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 323 -----IQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred -----EEEEecCccceeeeccCcceEEEeccC
Confidence 56889998765664 78 99999753
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.1e-06 Score=91.06 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=93.5
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
|..|.++++|.+...| |.|-.+|.|-||++...= -.+.. .-..+| ..|.+++|++.+.|+.+ +-+|+
T Consensus 25 Ps~I~slA~s~kS~~l-AvsRt~g~IEiwN~~~~w-~~~~v--------i~g~~d--rsIE~L~W~e~~RLFS~-g~sg~ 91 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQL-AVSRTDGNIEIWNLSNNW-FLEPV--------IHGPED--RSIESLAWAEGGRLFSS-GLSGS 91 (691)
T ss_pred ccceEEEEEeccCCce-eeeccCCcEEEEccCCCc-eeeEE--------EecCCC--CceeeEEEccCCeEEee-cCCce
Confidence 7889999999998876 556778999999998621 01111 111122 67999999976666655 66899
Q ss_pred EEEEeCCCCceeEEEeCCCCcccc-c--cC--------CCccc-----cc----------cC-CCceeeEEcCCCCEEEE
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISN-E--RD--------TEEKE-----GK----------AS-SDESSEEEEEEEEEEES 177 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~-~--~~--------i~gl~-----Gt----------Rs-~~P~sI~fs~d~~~llS 177 (358)
|.-||+-+.++...+++..+++-+ + .+ -+|.. |+ |. ++-.+|+|+|++.+|++
T Consensus 92 i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~ 171 (691)
T KOG2048|consen 92 ITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAG 171 (691)
T ss_pred EEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEe
Confidence 999999999999888865555421 1 11 11211 11 11 22388999999998885
Q ss_pred --ec-ceEEEECCCCc
Q psy2085 178 --SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 --aD-~IKIWD~~tG~ 190 (358)
.| .|+|||..+|.
T Consensus 172 Gs~Dg~Iriwd~~~~~ 187 (691)
T KOG2048|consen 172 GSIDGVIRIWDVKSGQ 187 (691)
T ss_pred cccCceEEEEEcCCCc
Confidence 78 99999999888
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.4e-07 Score=86.80 Aligned_cols=117 Identities=18% Similarity=0.209 Sum_probs=88.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-EG 123 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-DG 123 (358)
.+.+.|++|||-....+|.|+|..++-||.......-+. | ..+.++|+.+.|.++|+-|.+|+. |-
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~l------------l-ggh~gGvThL~~~edGn~lfsGaRk~d 273 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQL------------L-GGHGGGVTHLQWCEDGNKLFSGARKDD 273 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceee------------e-cccCCCeeeEEeccCcCeecccccCCC
Confidence 356889999997766779999999999988765432211 1 133389999999999999999886 88
Q ss_pred eEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceeeEEc--CCCCEEEEe--c-ceEEEECCC-Cc
Q psy2085 124 KVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE--EEEEEEESS--D-DDQAWTKEI-KK 190 (358)
Q Consensus 124 tV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs--~d~~~llSa--D-~IKIWD~~t-G~ 190 (358)
.|.+||+|. +.++..|..|..... ..|.|. |+++.|+|. | .|++||.++ |.
T Consensus 274 kIl~WDiR~~~~pv~~L~rhv~~TN----------------QRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn 331 (406)
T KOG2919|consen 274 KILCWDIRYSRDPVYALERHVGDTN----------------QRILFDLDPKGEILASGDTDGSVRVWDLKDLGN 331 (406)
T ss_pred eEEEEeehhccchhhhhhhhccCcc----------------ceEEEecCCCCceeeccCCCccEEEEecCCCCC
Confidence 999999995 556777776654211 457775 789999985 5 999999998 55
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=98.55 E-value=3.7e-07 Score=85.09 Aligned_cols=144 Identities=16% Similarity=0.170 Sum_probs=101.2
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.=|.|+|+.+-.|.+..+|=-|.. .+ .|...||+|+|.|.+- .++++++.||.|.|.+......-
T Consensus 73 LAScsYDgkVIiWke~~g~w~k~~-----------e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w-- 139 (299)
T KOG1332|consen 73 LASCSYDGKVIIWKEENGRWTKAY-----------EHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGW-- 139 (299)
T ss_pred eeEeecCceEEEEecCCCchhhhh-----------hhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCc--
Confidence 347788899999985444322221 22 3678999999999652 56688999999999998753110
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCC---C-----------CEEEEEeCCCeEEEEeCCCCcee--EEEeCCCCccc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPV---H-----------QLICVGTIEGKVEAWDPRMKVKA--GTLDCAFNCIS 147 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~---~-----------~llasGs~DGtV~iWD~Rs~~~i--~~L~~~~~~v~ 147 (358)
....++. -|.-+||+|+|.|. + .-|++||.|..|+||+..+++-+ .+|.+|.+-+
T Consensus 140 --~t~ki~~------aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwV- 210 (299)
T KOG1332|consen 140 --TTSKIVF------AHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWV- 210 (299)
T ss_pred --cchhhhh------ccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhh-
Confidence 0001111 12258999999986 4 35999999999999999887432 4578887765
Q ss_pred cccCCCccccccCCCceeeEEcCCC----CEEEE--ec-ceEEEECC
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEE----EEEES--SD-DDQAWTKE 187 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~----~~llS--aD-~IKIWD~~ 187 (358)
..++|.|.- .+|+| .| +|.||-..
T Consensus 211 ----------------RDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 211 ----------------RDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred ----------------hhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 778999864 35776 47 99999876
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=5.4e-07 Score=94.01 Aligned_cols=39 Identities=23% Similarity=0.340 Sum_probs=33.4
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
|+-+..|.|++|+|...+++++|+|.|+|-+||+.....
T Consensus 239 ~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~ 277 (555)
T KOG1587|consen 239 LESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSD 277 (555)
T ss_pred EecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCC
Confidence 344568999999999999999999999999999986543
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.1e-06 Score=85.20 Aligned_cols=141 Identities=9% Similarity=0.061 Sum_probs=95.4
Q ss_pred EEEeecCCceeeee-----eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEe----cCCeEEEEEcC
Q psy2085 6 CYQTNWHKQAVTLV-----IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGI----YKPRVRCYETD 76 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-----~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~----~d~~IrvwDl~ 76 (358)
.++.|.|+++..|+ ++.+++...++ +.+-.|++..-.++ |+++|+ .+-.|-+||++
T Consensus 87 v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~--------------~~~f~~ld~nck~~-ii~~GtE~~~s~A~v~lwDvR 151 (376)
T KOG1188|consen 87 VISCSSDGTVRLWDIRSQAESARISWTQQS--------------GTPFICLDLNCKKN-IIACGTELTRSDASVVLWDVR 151 (376)
T ss_pred eEEeccCCeEEEEEeecchhhhheeccCCC--------------CCcceEeeccCcCC-eEEeccccccCceEEEEEEec
Confidence 47899999999999 34444433333 34556666665555 557774 35679999998
Q ss_pred CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce----eEEEeCCCCccccccC
Q psy2085 77 NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVK----AGTLDCAFNCISNERD 151 (358)
Q Consensus 77 ~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~----i~~L~~~~~~v~~~~~ 151 (358)
.-..- .| .+.+.|.+.|++|.|+|. .++|+|||.||-|.++|+..-.. +.+++. .++|
T Consensus 152 ~~qq~-l~----------~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~-~sSI----- 214 (376)
T KOG1188|consen 152 SEQQL-LR----------QLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINH-GSSI----- 214 (376)
T ss_pred cccch-hh----------hhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcc-ccee-----
Confidence 53211 11 122233367999999997 56999999999999999865432 233332 2222
Q ss_pred CCccccccCCCceeeEEcCCC-CEEE--Eec-ceEEEECCCCc
Q psy2085 152 TEEKEGKASSDESSEEEEEEE-EEEE--SSD-DDQAWTKEIKK 190 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d~-~~ll--SaD-~IKIWD~~tG~ 190 (358)
..|.|+.++ .+|. |.+ +..+|+++.|.
T Consensus 215 ------------~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 215 ------------HLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred ------------eeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 779999887 3344 456 99999999887
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=98.50 E-value=2e-06 Score=82.39 Aligned_cols=158 Identities=16% Similarity=0.162 Sum_probs=97.6
Q ss_pred EeecCCceeeeeeccCcccCCCc-ccccceeEEEEeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEcCCC-cee---
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTN-DIRRRIELIQDFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYETDNL-SMK--- 81 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~-~~~~rIeliqdfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl~~l-slk--- 81 (358)
++|.||++..|-|..+ +++... ...+| ..+. +-.+.|..|+|.|-.. ..+|+++.||.+|||+..+. .++
T Consensus 78 ~cS~Drtv~iWEE~~~-~~~~~~~~Wv~~-ttl~--DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~ 153 (361)
T KOG2445|consen 78 TCSYDRTVSIWEEQEK-SEEAHGRRWVRR-TTLV--DSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT 153 (361)
T ss_pred EEecCCceeeeeeccc-ccccccceeEEE-EEee--cCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch
Confidence 6789999999997622 333322 22222 2222 3557899999999643 34577788999999997641 110
Q ss_pred --ee---------eecc-CceEE----------EEEee----------------------------cCCCCCeeEEEEcC
Q psy2085 82 --FE---------RCFD-SEVVT----------FEILS----------------------------DDYSSELNSIAINP 111 (358)
Q Consensus 82 --~~---------r~~d-~e~v~----------f~~LS----------------------------~D~s~~In~i~~np 111 (358)
.+ ++.. +-.|. +..-+ +|+++.|..|+|.|
T Consensus 154 Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAP 233 (361)
T KOG2445|consen 154 LQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAP 233 (361)
T ss_pred hhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeecc
Confidence 00 0000 00000 00000 13338899999999
Q ss_pred CC----CEEEEEeCCCeEEEEeCCCCc-ee-------------------EEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 112 VH----QLICVGTIEGKVEAWDPRMKV-KA-------------------GTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 112 ~~----~llasGs~DGtV~iWD~Rs~~-~i-------------------~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
.- .+||+|+-|| |+||.++... .+ ..++.|...+ -++.
T Consensus 234 n~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~V-----------------Wrv~ 295 (361)
T KOG2445|consen 234 NIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEV-----------------WRVR 295 (361)
T ss_pred ccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCce-----------------EEEE
Confidence 73 3899999999 9999987422 11 2222333222 7789
Q ss_pred EcCCCCEEEE-e-c-ceEEEECC
Q psy2085 168 EEEEEEEEES-S-D-DDQAWTKE 187 (358)
Q Consensus 168 fs~d~~~llS-a-D-~IKIWD~~ 187 (358)
|+-.|..|.| . | .||+|...
T Consensus 296 wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 296 WNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred EeeeeeEEeecCCCceeeehhhh
Confidence 9999988887 3 5 99999875
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=3.5e-06 Score=80.31 Aligned_cols=185 Identities=17% Similarity=0.251 Sum_probs=121.0
Q ss_pred eEEEEeecCCceeeee--eccCccc---CCCcccccceeEEE------------EeeCCCCEeEEEEcCCCC----EEEE
Q psy2085 4 EYCYQTNWHKQAVTLV--IIGGRYL---LPTNDIRRRIELIQ------------DFEMPGVSTSVRISPDGQ----YVLS 62 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~--~~~~r~l---k~d~~~~~rIeliq------------dfe~~~~v~~v~~SpDG~----~Lla 62 (358)
-|.|..-|.=-++.|- ..++-.| .-..+|.++|+++| .|+||-.++.+-|.||.. -|+|
T Consensus 38 iy~Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLA 117 (364)
T KOG0290|consen 38 IYTYNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLA 117 (364)
T ss_pred EEEecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhh
Confidence 4666666666677776 1111111 22467889998887 467778899999999873 2556
Q ss_pred EEecCCeEEEEEcCCCceee--eeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce--e-
Q psy2085 63 TGIYKPRVRCYETDNLSMKF--ERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVK--A- 136 (358)
Q Consensus 63 tG~~d~~IrvwDl~~lslk~--~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~--i- 136 (358)
|++ -.+|+|.+....-++ +-.+.. .. ..+|..++++.+||.. -++|.+.|-|-|.-|||+.++.. +
T Consensus 118 Ts~--D~LRlWri~~ee~~~~~~~~L~~-~k-----ns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vk 189 (364)
T KOG0290|consen 118 TSS--DFLRLWRIGDEESRVELQSVLNN-NK-----NSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVK 189 (364)
T ss_pred ccc--CeEEEEeccCcCCceehhhhhcc-Cc-----ccccCCcccccccccCCcceeEeecccCeEEEEEEeecccccee
Confidence 643 369999998421111 111100 00 1223378999999975 57999999999999999999743 2
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc----EEecCCCC-------Ccc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK----TYNLGPAP-------KWC 201 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~----~y~lgpap-------~Wc 201 (358)
..|-.|...| ..|+|...+..++ | +| .||++|++.-+ .| -+|.| .||
T Consensus 190 TQLIAHDKEV-----------------~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIY-E~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 190 TQLIAHDKEV-----------------YDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIY-EDPSPSTPLLRLSWN 251 (364)
T ss_pred eEEEecCcce-----------------eEEEeccCccceEEEecCCCcEEEEEecccccceEEe-cCCCCCCcceeeccC
Confidence 3455666665 8899999876665 4 79 99999998766 34 23443 277
Q ss_pred ccccchhHHhhhc
Q psy2085 202 GFLDNLTEELEEN 214 (358)
Q Consensus 202 sfldnlteele~~ 214 (358)
-..-|....+..+
T Consensus 252 kqDpnymATf~~d 264 (364)
T KOG0290|consen 252 KQDPNYMATFAMD 264 (364)
T ss_pred cCCchHHhhhhcC
Confidence 7666665545443
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=98.46 E-value=6.6e-07 Score=86.80 Aligned_cols=125 Identities=14% Similarity=0.204 Sum_probs=84.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCCC-CEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPVH-QLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~-~llasGs~ 121 (358)
|+-.+|+|.+..|++.++++ +|=+|.+|.+.-....|. +|+..... .+-+.-|++-.|+|.+ ++|+-.|+
T Consensus 163 HtyhiNSIS~NsD~Et~lSA--DdLRINLWnlei~d~sFn------IVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSS 234 (433)
T KOG1354|consen 163 HTYHINSISVNSDKETFLSA--DDLRINLWNLEIIDQSFN------IVDIKPANMEELTEVITSAEFHPHHCNVFVYSSS 234 (433)
T ss_pred ceeEeeeeeecCccceEeec--cceeeeeccccccCCcee------EEEccccCHHHHHHHHhhhccCHhHccEEEEecC
Confidence 45568999999999988754 577999999863222221 22221100 0111458899999985 58888899
Q ss_pred CCeEEEEeCCCCcee----EEEeCCCCccccc------cCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKA----GTLDCAFNCISNE------RDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i----~~L~~~~~~v~~~------~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~ 187 (358)
.|+|++-|+|..... ..+.-+.++..-+ .++ ..+.|+++|++|+|-| +|||||+.
T Consensus 235 KGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSI-----------SDvKFs~sGryilsRDyltvk~wD~n 301 (433)
T KOG1354|consen 235 KGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSI-----------SDVKFSHSGRYILSRDYLTVKLWDLN 301 (433)
T ss_pred CCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhh-----------hceEEccCCcEEEEeccceeEEEecc
Confidence 999999999965432 1222222222111 122 7799999999999999 99999994
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.44 E-value=1.2e-06 Score=88.88 Aligned_cols=125 Identities=12% Similarity=0.176 Sum_probs=89.6
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc----eeeeeeccC--------------ceEEEEEeecCCCCCeeEE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS----MKFERCFDS--------------EVVTFEILSDDYSSELNSI 107 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls----lk~~r~~d~--------------e~v~f~~LS~D~s~~In~i 107 (358)
+.|+||+|-|.+..++...-.+|.+.+||..... .++..+.+. ..+....++. +.||..
T Consensus 220 tsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~---g~in~f 296 (636)
T KOG2394|consen 220 SSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGE---GSINEF 296 (636)
T ss_pred cceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecc---ccccce
Confidence 5799999999766666666678999999874211 111111110 1111111111 689999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEE
Q psy2085 108 AINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAW 184 (358)
Q Consensus 108 ~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIW 184 (358)
+|+|+++.||+.|.||.++|+|..+...++.+..-.... .++.|||||++|++ -| -|.||
T Consensus 297 ~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGL-----------------LCvcWSPDGKyIvtGGEDDLVtVw 359 (636)
T KOG2394|consen 297 AFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGL-----------------LCVCWSPDGKYIVTGGEDDLVTVW 359 (636)
T ss_pred eEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccce-----------------EEEEEcCCccEEEecCCcceEEEE
Confidence 999999999999999999999998887766655333332 78999999999998 47 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
....++
T Consensus 360 Sf~erR 365 (636)
T KOG2394|consen 360 SFEERR 365 (636)
T ss_pred Eeccce
Confidence 998877
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.4e-06 Score=86.94 Aligned_cols=125 Identities=13% Similarity=0.097 Sum_probs=89.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
.|++|++.|-..+++|||+-|.+++|||++++.-|-. + +|| -+|+..|++..|||.+..|+|-+.|..|
T Consensus 324 KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-----p-----~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~I 393 (498)
T KOG4328|consen 324 KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-----P-----FLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEI 393 (498)
T ss_pred ccceeecCCCCchheeecccCcceeeeehhhhcCCCC-----c-----ceecccccceeeeeEEcCCCCceEeeccCCce
Confidence 5899999999999999999999999999998754421 1 222 3555789999999998889999999999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccc-cCCCceeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK-ASSDESSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt-Rs~~P~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
+|||.. ++.....+...|...- -| |.-.|-...|+|+-.+|+.+- .|-|+|...|+
T Consensus 394 Rv~dss---~~sa~~~p~~~I~Hn~------~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q 453 (498)
T KOG4328|consen 394 RVFDSS---CISAKDEPLGTIPHNN------RTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQ 453 (498)
T ss_pred EEeecc---cccccCCccceeeccC------cccccccchhheeCCCccEEEEeccCcceeEEcCCCCE
Confidence 999963 3322222211110000 00 222235678999988888754 88999998877
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.3e-06 Score=86.32 Aligned_cols=89 Identities=18% Similarity=0.334 Sum_probs=73.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|...+..|+|||-...|+++-+||..|.+||+.... ..+.-. |..+..+|+|+|+|.+|+.|+..|
T Consensus 207 HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~-----s~~~l~---------y~~Plstvaf~~~G~~L~aG~s~G 272 (673)
T KOG4378|consen 207 HSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQA-----STDRLT---------YSHPLSTVAFSECGTYLCAGNSKG 272 (673)
T ss_pred ccCCcCcceecCCccceEEEecccceEEEeeccccc-----ccceee---------ecCCcceeeecCCceEEEeecCCc
Confidence 667899999999999999998999999999997421 111101 226789999999999999999999
Q ss_pred eEEEEeCCCC-ceeEEEeCCCCcc
Q psy2085 124 KVEAWDPRMK-VKAGTLDCAFNCI 146 (358)
Q Consensus 124 tV~iWD~Rs~-~~i~~L~~~~~~v 146 (358)
.|..+|+|.. .++.++..|...|
T Consensus 273 ~~i~YD~R~~k~Pv~v~sah~~sV 296 (673)
T KOG4378|consen 273 ELIAYDMRSTKAPVAVRSAHDASV 296 (673)
T ss_pred eEEEEecccCCCCceEeeecccce
Confidence 9999999975 5789999888776
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.6e-06 Score=85.31 Aligned_cols=112 Identities=13% Similarity=0.106 Sum_probs=74.2
Q ss_pred CCCCEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT- 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs- 120 (358)
+...+.+.+|||||++|+.++. ..++|.+||+.+...+..... + +...+++|+|++..|++++
T Consensus 202 ~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~-----------~---g~~~~~~wSPDG~~La~~~~ 267 (429)
T PRK01742 202 SSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASF-----------R---GHNGAPAFSPDGSRLAFASS 267 (429)
T ss_pred CCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecC-----------C---CccCceeECCCCCEEEEEEe
Confidence 4556899999999999865542 235899999976432111111 1 2345789999999887765
Q ss_pred CCCeEEEE--eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee--c-ceEEEECC
Q psy2085 121 IEGKVEAW--DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS--D-DDQAWTKE 187 (358)
Q Consensus 121 ~DGtV~iW--D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa--D-~IKIWD~~ 187 (358)
.+|.+.+| |+.++. +..+..+...+ ....|+|||+.|+ ++ + ...||+..
T Consensus 268 ~~g~~~Iy~~d~~~~~-~~~lt~~~~~~-----------------~~~~wSpDG~~i~f~s~~~g~~~I~~~~ 322 (429)
T PRK01742 268 KDGVLNIYVMGANGGT-PSQLTSGAGNN-----------------TEPSWSPDGQSILFTSDRSGSPQVYRMS 322 (429)
T ss_pred cCCcEEEEEEECCCCC-eEeeccCCCCc-----------------CCEEECCCCCEEEEEECCCCCceEEEEE
Confidence 68877766 665554 34454333222 5689999999876 44 3 77888764
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.3e-07 Score=99.68 Aligned_cols=110 Identities=13% Similarity=0.283 Sum_probs=90.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|-.+|+|+.|-..|.||+ ||+.|..||||...+.- ++ +. -.++++.|..++++.++-++|+||.|.
T Consensus 189 H~naVyca~fDrtg~~Ii-tgsdd~lvKiwS~et~~-----~l-As-------~rGhs~ditdlavs~~n~~iaaaS~D~ 254 (1113)
T KOG0644|consen 189 HRNAVYCAIFDRTGRYII-TGSDDRLVKIWSMETAR-----CL-AS-------CRGHSGDITDLAVSSNNTMIAAASNDK 254 (1113)
T ss_pred hhhheeeeeeccccceEe-ecCccceeeeeeccchh-----hh-cc-------CCCCccccchhccchhhhhhhhcccCc
Confidence 345799999999999985 89999999999976521 11 00 133447899999999999999999999
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKE 187 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~ 187 (358)
.|++|-++++.++.+|.+|.+.| ++|+|+|-. .| .| +++|||.+
T Consensus 255 vIrvWrl~~~~pvsvLrghtgav-----------------taiafsP~~---sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 255 VIRVWRLPDGAPVSVLRGHTGAV-----------------TAIAFSPRA---SSSDDGTCRIWDAR 300 (1113)
T ss_pred eEEEEecCCCchHHHHhccccce-----------------eeeccCccc---cCCCCCceEecccc
Confidence 99999999999999999999888 779999844 34 45 99999986
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.4e-06 Score=85.97 Aligned_cols=126 Identities=12% Similarity=0.100 Sum_probs=88.7
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
.+++|++||..| +||+.||.+|||+++++..- .+.. +...|++++|+|++.+|++-|.| ..++
T Consensus 148 k~vaf~~~gs~l-atgg~dg~lRv~~~Ps~~t~l~e~~--------------~~~eV~DL~FS~dgk~lasig~d-~~~V 211 (398)
T KOG0771|consen 148 KVVAFNGDGSKL-ATGGTDGTLRVWEWPSMLTILEEIA--------------HHAEVKDLDFSPDGKFLASIGAD-SARV 211 (398)
T ss_pred eEEEEcCCCCEe-eeccccceEEEEecCcchhhhhhHh--------------hcCccccceeCCCCcEEEEecCC-ceEE
Confidence 789999999865 78888999999998875321 1111 11679999999999999999999 9999
Q ss_pred EeCCCCceeEEEeCCCC--ccc-cccCCCc----------------cc---cc--------cCCCc-------eeeEEcC
Q psy2085 128 WDPRMKVKAGTLDCAFN--CIS-NERDTEE----------------KE---GK--------ASSDE-------SSEEEEE 170 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~--~v~-~~~~i~g----------------l~---Gt--------Rs~~P-------~sI~fs~ 170 (358)
||.+++.+++.+..-.. ... +.|+.++ +. ++ |..++ .+++.++
T Consensus 212 W~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~ 291 (398)
T KOG0771|consen 212 WSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSD 291 (398)
T ss_pred EEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcC
Confidence 99999988776652110 011 1132222 10 11 11111 7888999
Q ss_pred CCCEEE--Eec-ceEEEECCCCc
Q psy2085 171 EEEEEE--SSD-DDQAWTKEIKK 190 (358)
Q Consensus 171 d~~~ll--SaD-~IKIWD~~tG~ 190 (358)
+|++++ |.| .|-|.+..+-+
T Consensus 292 dGkf~AlGT~dGsVai~~~~~lq 314 (398)
T KOG0771|consen 292 DGKFLALGTMDGSVAIYDAKSLQ 314 (398)
T ss_pred CCcEEEEeccCCcEEEEEeceee
Confidence 999987 578 88899888766
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=4e-06 Score=81.11 Aligned_cols=92 Identities=17% Similarity=0.201 Sum_probs=65.1
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee---------------------------
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS--------------------------- 97 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS--------------------------- 97 (358)
+.+...++|||||+.|+.|...+-+|.||.+.+.+.-...|.... ++...+.
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~-~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ 169 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTN-VKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWI 169 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccC-ceeEEECCCCceeeeeecccHHHHHHHHhhHHHH
Confidence 467899999999999999999999999999987543222222111 1111122
Q ss_pred ------------------cCCC-------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 98 ------------------DDYS-------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 98 ------------------~D~s-------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
||.. -+|..++|+|.+++||.|+.||++++-+.-+=++.+
T Consensus 170 ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~ 246 (447)
T KOG4497|consen 170 LLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFG 246 (447)
T ss_pred HHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhhhhceeeeeehh
Confidence 2211 578999999999999999999999986655544443
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.9e-06 Score=80.87 Aligned_cols=120 Identities=13% Similarity=0.088 Sum_probs=90.2
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEe
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGT 120 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs 120 (358)
+-|...|..|+|+.+|..++|+.+.||.||+||++.+.- +-+ ..-+|.-+....-++||++ .+++||-.
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH-------STI---IYE~p~~~~pLlRLswnkqDpnymATf~ 262 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH-------STI---IYEDPSPSTPLLRLSWNKQDPNYMATFA 262 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEeccccc-------ceE---EecCCCCCCcceeeccCcCCchHHhhhh
Confidence 347778999999999999999999999999999986521 000 1111221256788999986 56777655
Q ss_pred C-CCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE-ec--ceEEEECCC
Q psy2085 121 I-EGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES-SD--DDQAWTKEI 188 (358)
Q Consensus 121 ~-DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS-aD--~IKIWD~~t 188 (358)
. ...|.+-|+|.. .++..|.+|..+| +.|+|.|... .|.| .| .+-|||+..
T Consensus 263 ~dS~~V~iLDiR~P~tpva~L~~H~a~V-----------------NgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 263 MDSNKVVILDIRVPCTPVARLRNHQASV-----------------NGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred cCCceEEEEEecCCCcceehhhcCcccc-----------------cceEecCCCCceeeecCCcceEEEEeccc
Confidence 4 457999999986 4689999999887 8899999765 5556 45 999999975
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.35 E-value=4e-06 Score=82.43 Aligned_cols=119 Identities=22% Similarity=0.272 Sum_probs=93.9
Q ss_pred eCCCCEeEEEEcCC-CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 43 EMPGVSTSVRISPD-GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpD-G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+-|..++.+.|-|. -++-+||++--++||+||+.... -++..|.++ . .+|.++..-|.++++.+|..
T Consensus 200 rVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR--------RPV~~fd~~-E---~~is~~~l~p~gn~Iy~gn~ 267 (412)
T KOG3881|consen 200 RVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR--------RPVAQFDFL-E---NPISSTGLTPSGNFIYTGNT 267 (412)
T ss_pred eeeeeeccceecCCCCCceEEEEecceeEEEecCcccC--------cceeEeccc-c---CcceeeeecCCCcEEEEecc
Confidence 45667889999886 13456788888999999997421 223333332 1 57999999999999999999
Q ss_pred CCeEEEEeCCCCceeEE-EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-|.+..+|+|++..++. +.+-.+++ .+|.-||++++|+| .| -|||+|.++.+
T Consensus 268 ~g~l~~FD~r~~kl~g~~~kg~tGsi-----------------rsih~hp~~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 268 KGQLAKFDLRGGKLLGCGLKGITGSI-----------------RSIHCHPTHPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred cchhheecccCceeeccccCCccCCc-----------------ceEEEcCCCceEEeeccceeEEEeecccch
Confidence 99999999999998876 66655554 78999999999998 58 99999999855
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.4e-05 Score=79.30 Aligned_cols=134 Identities=13% Similarity=0.189 Sum_probs=97.3
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
..+.+.||++..|.+ +|++- +-.+...+.|+.|.|.| .+|.|+..|.--|.|..+..+- .-|
T Consensus 383 ~~T~gqdk~v~lW~~-------------~k~~w--t~~~~d~~~~~~fhpsg--~va~Gt~~G~w~V~d~e~~~lv-~~~ 444 (626)
T KOG2106|consen 383 LLTCGQDKHVRLWND-------------HKLEW--TKIIEDPAECADFHPSG--VVAVGTATGRWFVLDTETQDLV-TIH 444 (626)
T ss_pred eeeccCcceEEEccC-------------CceeE--EEEecCceeEeeccCcc--eEEEeeccceEEEEecccceeE-EEE
Confidence 356788999999981 12222 22344568999999999 4578888999999998864332 222
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEe-CCCCccccccCCCccccccCCCc
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK-AGTLD-CAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~-i~~L~-~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
.+ ...++++.|||+|.+||.||.|+.|.++-+..... ...+. ++.+++
T Consensus 445 ~d-------------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~i----------------- 494 (626)
T KOG2106|consen 445 TD-------------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPI----------------- 494 (626)
T ss_pred ec-------------CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCcee-----------------
Confidence 22 26799999999999999999999999997654433 22221 233555
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
+.|.||+|+++|.| .| -|-.|...
T Consensus 495 thLDwS~Ds~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 495 THLDWSSDSQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred EEeeecCCCceEEeccCceEEEEEccc
Confidence 77999999999996 68 99999554
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.5e-06 Score=88.48 Aligned_cols=118 Identities=15% Similarity=0.240 Sum_probs=83.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC---Cc-eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDN---LS-MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~---ls-lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
..++...|.|-.-. +++++.++.|++|.+.. .. ..+++ +..| ..|.++|.|+++.+++..+.+||-
T Consensus 295 d~ir~l~~~~sep~-lit~sed~~lk~WnLqk~~~s~~~~~ep-----i~tf----raH~gPVl~v~v~~n~~~~ysgg~ 364 (577)
T KOG0642|consen 295 DCIRALAFHPSEPV-LITASEDGTLKLWNLQKAKKSAEKDVEP-----ILTF----RAHEGPVLCVVVPSNGEHCYSGGI 364 (577)
T ss_pred hhhhhhhcCCCCCe-EEEeccccchhhhhhcccCCccccceee-----eEEE----ecccCceEEEEecCCceEEEeecc
Confidence 44555566665444 46889999999999932 11 11111 1122 234488999999999999999999
Q ss_pred CCeEEEE------eCCCCc----eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCC
Q psy2085 122 EGKVEAW------DPRMKV----KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEI 188 (358)
Q Consensus 122 DGtV~iW------D~Rs~~----~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~t 188 (358)
||+|++| |+-... ..++|.||.+.+ ..+++|+....|+|+ | ++++|+...
T Consensus 365 Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdav-----------------w~l~~s~~~~~Llscs~DgTvr~w~~~~ 427 (577)
T KOG0642|consen 365 DGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAV-----------------WLLALSSTKDRLLSCSSDGTVRLWEPTE 427 (577)
T ss_pred CceeeeeccCCCCCcccccCcchhccceeccccce-----------------eeeeecccccceeeecCCceEEeeccCC
Confidence 9999999 444333 235566676665 678999988889874 8 999999875
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
..
T Consensus 428 ~~ 429 (577)
T KOG0642|consen 428 ES 429 (577)
T ss_pred cC
Confidence 54
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.32 E-value=9.4e-06 Score=83.12 Aligned_cols=72 Identities=15% Similarity=-0.068 Sum_probs=65.2
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-c
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-D 180 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~ 180 (358)
+.||++.++.+-.+|-|++.|+.|..|++...+.++...+....+ .++..+|||..++++. .
T Consensus 103 ~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~-----------------~sl~is~D~~~l~~as~~ 165 (541)
T KOG4547|consen 103 GNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLV-----------------SSLCISPDGKILLTASRQ 165 (541)
T ss_pred CcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCcc-----------------ceEEEcCCCCEEEeccce
Confidence 789999999999999999999999999999999888887755444 6799999999999999 9
Q ss_pred eEEEECCCCc
Q psy2085 181 DQAWTKEIKK 190 (358)
Q Consensus 181 IKIWD~~tG~ 190 (358)
||+||+++++
T Consensus 166 ik~~~~~~ke 175 (541)
T KOG4547|consen 166 IKVLDIETKE 175 (541)
T ss_pred EEEEEccCce
Confidence 9999999988
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.9e-05 Score=77.35 Aligned_cols=121 Identities=9% Similarity=0.114 Sum_probs=90.3
Q ss_pred EEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 39 IQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 39 iqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
|=.+-||..|-+|++..+ .|++.= ..+|.|||++++.+- ..++ ..|....++.++++|+.+.++|-
T Consensus 81 ICe~~fpt~IL~VrmNr~--RLvV~L--ee~IyIydI~~MklL--hTI~--------t~~~n~~gl~AlS~n~~n~ylAy 146 (391)
T KOG2110|consen 81 ICEIFFPTSILAVRMNRK--RLVVCL--EESIYIYDIKDMKLL--HTIE--------TTPPNPKGLCALSPNNANCYLAY 146 (391)
T ss_pred EEEEecCCceEEEEEccc--eEEEEE--cccEEEEecccceee--hhhh--------ccCCCccceEeeccCCCCceEEe
Confidence 335669999999999875 355443 456999999986442 1111 11111145666666666677776
Q ss_pred Ee--CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c---ceEEEECCCCc
Q psy2085 119 GT--IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D---DDQAWTKEIKK 190 (358)
Q Consensus 119 Gs--~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D---~IKIWD~~tG~ 190 (358)
=+ +-|.|.+||.-+-+++.++++|.+++ -.|+||++|.+|+|+ | .|||+.+.+|+
T Consensus 147 p~s~t~GdV~l~d~~nl~~v~~I~aH~~~l-----------------Aalafs~~G~llATASeKGTVIRVf~v~~G~ 207 (391)
T KOG2110|consen 147 PGSTTSGDVVLFDTINLQPVNTINAHKGPL-----------------AALAFSPDGTLLATASEKGTVIRVFSVPEGQ 207 (391)
T ss_pred cCCCCCceEEEEEcccceeeeEEEecCCce-----------------eEEEECCCCCEEEEeccCceEEEEEEcCCcc
Confidence 43 37999999999999999999999887 669999999999984 5 99999999998
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.7e-05 Score=80.39 Aligned_cols=113 Identities=12% Similarity=0.066 Sum_probs=72.5
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEE--EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCY--ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT- 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~Irvw--Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs- 120 (358)
+++....++|||||++|+.+++.++.+.|| |+.+... .+ +.. +...+.+.+|+|++..|++++
T Consensus 246 ~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~--~~-----------lt~-~~~~~~~~~wSpDG~~i~f~s~ 311 (429)
T PRK01742 246 FRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP--SQ-----------LTS-GAGNNTEPSWSPDGQSILFTSD 311 (429)
T ss_pred CCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe--Ee-----------ecc-CCCCcCCEEECCCCCEEEEEEC
Confidence 344456789999999998776667776666 4443221 11 111 113467899999999766655
Q ss_pred CCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-cceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-DDDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D~IKIWD~~tG~ 190 (358)
.+|.+.+|++.... ....+ .+.. ..+.|+|+|++|+. + |.+-+||+.+|+
T Consensus 312 ~~g~~~I~~~~~~~~~~~~l-~~~~-------------------~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~ 364 (429)
T PRK01742 312 RSGSPQVYRMSASGGGASLV-GGRG-------------------YSAQISADGKTLVMINGDNVVKQDLTSGS 364 (429)
T ss_pred CCCCceEEEEECCCCCeEEe-cCCC-------------------CCccCCCCCCEEEEEcCCCEEEEECCCCC
Confidence 57899999875432 22223 2211 23679999999875 3 355569999886
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.8e-05 Score=77.28 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=75.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.+..++|||||++|+.+.+.+ ..|.+||+.+..++ +.++ . ...+...+|+|+++.|+..+.
T Consensus 241 ~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~--~lt~-----------~-~~~~~~~~wSPDG~~I~f~s~ 306 (429)
T PRK03629 241 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--QVTD-----------G-RSNNTEPTWFPDSQNLAYTSD 306 (429)
T ss_pred CCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEE--EccC-----------C-CCCcCceEECCCCCEEEEEeC
Confidence 455566789999999987664433 46889998764322 1111 1 134678899999998877776
Q ss_pred -CCeEEEE--eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec----ceEEEECCCCc
Q psy2085 122 -EGKVEAW--DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD----DDQAWTKEIKK 190 (358)
Q Consensus 122 -DGtV~iW--D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD----~IKIWD~~tG~ 190 (358)
+|...+| |+.++.. ..+....... ....|+|||++|+. .+ .|.+||+.+|+
T Consensus 307 ~~g~~~Iy~~d~~~g~~-~~lt~~~~~~-----------------~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 307 QAGRPQVYKVNINGGAP-QRITWEGSQN-----------------QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred CCCCceEEEEECCCCCe-EEeecCCCCc-----------------cCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 4555665 6655543 3333222111 45889999998874 22 68899999887
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.27 E-value=9.3e-06 Score=79.42 Aligned_cols=123 Identities=13% Similarity=0.155 Sum_probs=85.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeecc-CceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFD-SEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-EG 123 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d-~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-DG 123 (358)
..|.|++|-|.+..-+|.|+-. -|-||....... ..|... .......++....+..|+++.||+++..+++++- |.
T Consensus 141 rnvtclawRPlsaselavgCr~-gIciW~~s~tln-~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gss 218 (445)
T KOG2139|consen 141 RNVTCLAWRPLSASELAVGCRA-GICIWSDSRTLN-ANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSS 218 (445)
T ss_pred cceeEEEeccCCcceeeeeecc-eeEEEEcCcccc-cccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcc
Confidence 3589999999988888888754 599999763211 111100 0111223444434478999999999999999885 78
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.|.+||+.++..+....-....+ .-+.|||||++|+. .| +.++|...
T Consensus 219 si~iWdpdtg~~~pL~~~glgg~-----------------slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 219 SIMIWDPDTGQKIPLIPKGLGGF-----------------SLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred eEEEEcCCCCCcccccccCCCce-----------------eeEEEcCCCCEEEEecccceeeeehhc
Confidence 99999999998765442222222 55999999999985 68 99999654
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=4.8e-05 Score=77.16 Aligned_cols=115 Identities=13% Similarity=0.095 Sum_probs=76.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sGs 120 (358)
+...+.+.+|||||++|+.+.. .+++|.+||+.+...+. +. ++.+.+.+.+|+|++..|+ +.+
T Consensus 200 ~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~-------------l~-~~~g~~~~~~~SPDG~~la~~~~ 265 (435)
T PRK05137 200 GSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQREL-------------VG-NFPGMTFAPRFSPDGRKVVMSLS 265 (435)
T ss_pred CCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEE-------------ee-cCCCcccCcEECCCCCEEEEEEe
Confidence 4567899999999998865532 24789999997643210 00 1114566889999998665 555
Q ss_pred CCCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 121 IEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
.+|. |.+||+.++.. ..|..+.... ....|+|||+.|+ ++| .|.+||..+++
T Consensus 266 ~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~-----------------~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~ 325 (435)
T PRK05137 266 QGGNTDIYTMDLRSGTT-TRLTDSPAID-----------------TSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN 325 (435)
T ss_pred cCCCceEEEEECCCCce-EEccCCCCcc-----------------CceeEcCCCCEEEEEECCCCCCeEEEEECCCCC
Confidence 5665 66679887754 3343332221 5689999999887 343 68888988765
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-05 Score=83.00 Aligned_cols=88 Identities=11% Similarity=0.062 Sum_probs=50.3
Q ss_pred CCeeEEEEcCCCC---EEEEEeCCCeEEEEeCCCCceeEEEeCC-------CCccccc-cCCC-ccc-cc-cCCCc---e
Q psy2085 102 SELNSIAINPVHQ---LICVGTIEGKVEAWDPRMKVKAGTLDCA-------FNCISNE-RDTE-EKE-GK-ASSDE---S 164 (358)
Q Consensus 102 ~~In~i~~np~~~---llasGs~DGtV~iWD~Rs~~~i~~L~~~-------~~~v~~~-~~i~-gl~-Gt-Rs~~P---~ 164 (358)
+.|.+|+|+..+. +|||||.|..|++|-++-+.......-. ..++..+ ..++ ++. -+ -..+. +
T Consensus 192 DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~ 271 (764)
T KOG1063|consen 192 DWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVY 271 (764)
T ss_pred hhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceE
Confidence 6788899976543 8999999999999976543311110000 0000000 0000 000 00 00111 8
Q ss_pred eeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 165 SEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 165 sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
++.|+|.+..|+| +| ++.||...+.
T Consensus 272 sv~W~p~~~~LLSASaDksmiiW~pd~~ 299 (764)
T KOG1063|consen 272 SVWWHPEGLDLLSASADKSMIIWKPDEN 299 (764)
T ss_pred EEEEccchhhheecccCcceEEEecCCc
Confidence 9999999977775 79 9999988654
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.2e-06 Score=86.22 Aligned_cols=73 Identities=15% Similarity=0.091 Sum_probs=61.7
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCC--CCEE
Q psy2085 99 DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEE 175 (358)
Q Consensus 99 D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~l 175 (358)
+|++.|||++||.+|.+||+||+|-.+.|||+-..+.+..+. +|...| -++.|-|. .+.|
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNI-----------------FsvKFvP~tnnriv 110 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANI-----------------FSVKFVPYTNNRIV 110 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccce-----------------eEEeeeccCCCeEE
Confidence 455899999999999999999999999999999999988886 565555 67889884 3466
Q ss_pred EE--ec-ceEEEECCC
Q psy2085 176 ES--SD-DDQAWTKEI 188 (358)
Q Consensus 176 lS--aD-~IKIWD~~t 188 (358)
+| +| .|+++|+.+
T Consensus 111 ~sgAgDk~i~lfdl~~ 126 (758)
T KOG1310|consen 111 LSGAGDKLIKLFDLDS 126 (758)
T ss_pred EeccCcceEEEEeccc
Confidence 66 68 999999986
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.9e-05 Score=82.17 Aligned_cols=228 Identities=14% Similarity=0.134 Sum_probs=131.0
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEE------------Ee------
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFE------------IL------ 96 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~------------~L------ 96 (358)
-++|.+. |...|+||++|.||+. +|+|+.|..|-||.-.- ..+|+. |.| .+.+. .|
T Consensus 44 ~llqtLKgHKDtVycVAys~dGkr-FASG~aDK~VI~W~~klEG~LkYS-H~D--~IQCMsFNP~~h~LasCsLsdFglW 119 (1081)
T KOG1538|consen 44 TLLQPLKGHKDTVYCVAYAKDGKR-FASGSADKSVIIWTSKLEGILKYS-HND--AIQCMSFNPITHQLASCSLSDFGLW 119 (1081)
T ss_pred ccccccccccceEEEEEEccCCce-eccCCCceeEEEecccccceeeec-cCC--eeeEeecCchHHHhhhcchhhcccc
Confidence 3556653 7788999999999985 58888999999998642 234432 222 22221 12
Q ss_pred ecCCC--------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC---CCCccccccCCCccccccCCCcee
Q psy2085 97 SDDYS--------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC---AFNCISNERDTEEKEGKASSDESS 165 (358)
Q Consensus 97 S~D~s--------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~---~~~~v~~~~~i~gl~GtRs~~P~s 165 (358)
|++-. ..|++|+|+.+|++||.|..||||.+-+ .+++....++- +++++ -+
T Consensus 120 S~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRN-k~gEek~~I~Rpgg~Nspi-----------------ws 181 (1081)
T KOG1538|consen 120 SPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRN-KNGEEKVKIERPGGSNSPI-----------------WS 181 (1081)
T ss_pred ChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeec-CCCCcceEEeCCCCCCCCc-----------------eE
Confidence 22110 6799999999999999999999999985 45666666664 34444 78
Q ss_pred eEEcCCCC-----EEEEec---ceEEEECCCCcEE----ecCCCCCccccccchhHHhhhccccceeecceeeeHHHHh-
Q psy2085 166 EEEEEEEE-----EEESSD---DDQAWTKEIKKTY----NLGPAPKWCGFLDNLTEELEENIIENVYDDYKFVTRQELE- 232 (358)
Q Consensus 166 I~fs~d~~-----~llSaD---~IKIWD~~tG~~y----~lgpap~Wcsfldnlteele~~~~~~vyddy~fvt~~~l~- 232 (358)
|+|+|... .+.-.| |+-++.+. |+-. .||--|---++.-|----| .+..-...+|.|++-+.
T Consensus 182 i~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~L----iGGsdk~L~~fTR~GvrL 256 (1081)
T KOG1538|consen 182 ICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYIL----LGGSDKQLSLFTRDGVRL 256 (1081)
T ss_pred EEecCCCCCCccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEE----EccCCCceEEEeecCeEE
Confidence 99998643 333466 66666654 4310 4444443222111100000 01111223455544331
Q ss_pred -hc-CCCccccccceeecccccccchH-------HHHHhhhcc-----CChhhHHHHHHHHHHHHHHHhhccccc
Q psy2085 233 -DL-GLGHLIGTSLLRAYMHGFFMDIR-------LYRKAKSVS-----APFEFEEFKKKKIRERIEQERTRGVQL 293 (358)
Q Consensus 233 -~l-~l~~ligt~~l~~ymhg~fi~~~-------ly~~~~~~~-----~p~~~~~~r~~~i~~~~~~~~~~ri~~ 293 (358)
++ ..+|-|=|..++| .|-.+.+. .|+-+-+-. +-|+|.+---.-|-|-|+-++..||.-
T Consensus 257 GTvg~~D~WIWtV~~~P--NsQ~v~~GCqDGTiACyNl~fSTVH~ly~~RYA~R~sMtDVivQhLi~~qkvrIkC 329 (1081)
T KOG1538|consen 257 GTVGEQDSWIWTVQAKP--NSQYVVVGCQDGTIACYNLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKC 329 (1081)
T ss_pred eeccccceeEEEEEEcc--CCceEEEEEccCeeehhhhHHhHhhhhhHHhhhhhhhhHHHHHHHHhhcceeeeeH
Confidence 22 3556666666776 33333222 232221111 234554444566788889999999864
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=98.22 E-value=8.2e-06 Score=84.99 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=83.0
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEec----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIY----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
|.|.-.|.+++.||+|+.|++++-. -.-|++|++.+-.... .+.+ |+-.|+.++|||++.+|+
T Consensus 522 YGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-------~L~~------HsLTVT~l~FSpdg~~LL 588 (764)
T KOG1063|consen 522 YGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-------ELEG------HSLTVTRLAFSPDGRYLL 588 (764)
T ss_pred ccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhh-------eecc------cceEEEEEEECCCCcEEE
Confidence 4455579999999999976544311 1249999987532111 1111 113689999999999999
Q ss_pred EEeCCCeEEEEeCCCCc----eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCC
Q psy2085 118 VGTIEGKVEAWDPRMKV----KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIK 189 (358)
Q Consensus 118 sGs~DGtV~iWD~Rs~~----~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG 189 (358)
+.|.|.++.+|...... ..+.+..|...| -+..|+|++.+++|+ | +||||...++
T Consensus 589 svsRDRt~sl~~~~~~~~~e~~fa~~k~HtRII-----------------WdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 589 SVSRDRTVSLYEVQEDIKDEFRFACLKAHTRII-----------------WDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EeecCceEEeeeeecccchhhhhccccccceEE-----------------EEcccCcccceeEEecCCceEEEEeccCc
Confidence 99999999999863221 123344555554 567899999988864 7 9999999887
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.2e-06 Score=88.91 Aligned_cols=123 Identities=14% Similarity=0.167 Sum_probs=82.6
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
.|+.++|-|||..|+.++ +.++-|||+++.++- ...|. +.|+||+|+.+|.++|+|+.|..
T Consensus 14 ci~d~afkPDGsqL~lAA--g~rlliyD~ndG~llqtLKgHK---------------DtVycVAys~dGkrFASG~aDK~ 76 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA--GSRLLVYDTSDGTLLQPLKGHK---------------DTVYCVAYAKDGKRFASGSADKS 76 (1081)
T ss_pred chheeEECCCCceEEEec--CCEEEEEeCCCccccccccccc---------------ceEEEEEEccCCceeccCCCcee
Confidence 789999999998876654 357999999986542 12222 57999999999999999999999
Q ss_pred EEEEeCCCCceeEEEe-CCCCcccc-ccCC-Cc------cc--cc-----------cCC-CceeeEEcCCCCEEEE-ec-
Q psy2085 125 VEAWDPRMKVKAGTLD-CAFNCISN-ERDT-EE------KE--GK-----------ASS-DESSEEEEEEEEEEES-SD- 179 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~-~~~~~v~~-~~~i-~g------l~--Gt-----------Rs~-~P~sI~fs~d~~~llS-aD- 179 (358)
|-+|.+.-. +.|. .|.+.+.+ .|.+ +. +. |- +++ +..+.+|..||++++- .-
T Consensus 77 VI~W~~klE---G~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~n 153 (1081)
T KOG1538|consen 77 VIIWTSKLE---GILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFN 153 (1081)
T ss_pred EEEeccccc---ceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccC
Confidence 999986432 3333 23333211 1111 00 00 11 111 2278899999998886 55
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
||-|=+. +|+
T Consensus 154 GTIsiRNk-~gE 164 (1081)
T KOG1538|consen 154 GTISIRNK-NGE 164 (1081)
T ss_pred ceEEeecC-CCC
Confidence 9998764 355
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=98.20 E-value=9.4e-06 Score=78.13 Aligned_cols=76 Identities=20% Similarity=0.338 Sum_probs=62.5
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCcee--eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMK--FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk--~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
|...|.||+++.+|..| ||++.+|+ |||||..+..+- +.|+.+. ..|.||+|||+..+||++|
T Consensus 180 H~s~Iacv~Ln~~Gt~v-ATaStkGTLIRIFdt~~g~~l~E~RRG~d~-------------A~iy~iaFSp~~s~LavsS 245 (346)
T KOG2111|consen 180 HDSDIACVALNLQGTLV-ATASTKGTLIRIFDTEDGTLLQELRRGVDR-------------ADIYCIAFSPNSSWLAVSS 245 (346)
T ss_pred ccCceeEEEEcCCccEE-EEeccCcEEEEEEEcCCCcEeeeeecCCch-------------heEEEEEeCCCccEEEEEc
Confidence 56789999999999855 77777886 899999887654 4455442 4689999999999999999
Q ss_pred CCCeEEEEeCCCC
Q psy2085 121 IEGKVEAWDPRMK 133 (358)
Q Consensus 121 ~DGtV~iWD~Rs~ 133 (358)
+.|||.++-++..
T Consensus 246 dKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 246 DKGTLHIFSLRDT 258 (346)
T ss_pred CCCeEEEEEeecC
Confidence 9999999988754
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.9e-05 Score=75.62 Aligned_cols=115 Identities=10% Similarity=0.079 Sum_probs=73.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++...+++|||||++|+.+.+.+ +.|.+||+.+..++. + .... ......+|+|++..|+++++
T Consensus 246 ~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~---l----------t~~~-~~~~~~~~spDG~~l~f~sd 311 (433)
T PRK04922 246 FRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR---L----------TNHF-GIDTEPTWAPDGKSIYFTSD 311 (433)
T ss_pred CCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE---C----------ccCC-CCccceEECCCCCEEEEEEC
Confidence 455566889999999887665444 469999987643221 1 1110 22356899999998877764
Q ss_pred -CCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec----ceEEEECCCCc
Q psy2085 122 -EGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD----DDQAWTKEIKK 190 (358)
Q Consensus 122 -DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD----~IKIWD~~tG~ 190 (358)
+|. |.++|+.+++. ..+....... ..+.|||+|++|+. .+ .|.+||+.+|+
T Consensus 312 ~~g~~~iy~~dl~~g~~-~~lt~~g~~~-----------------~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 312 RGGRPQIYRVAASGGSA-ERLTFQGNYN-----------------ARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred CCCCceEEEEECCCCCe-EEeecCCCCc-----------------cCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 555 55556666543 2232111111 45899999999873 22 69999998876
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=6.4e-05 Score=76.40 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=74.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEE--ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE-e
Q psy2085 44 MPGVSTSVRISPDGQYVLSTG--IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG-T 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG--~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG-s 120 (358)
.+..+.+.+|||||+.|+.+. ...++|.+||+.+...+.... +.+.+..++|+|++..|+.. +
T Consensus 197 ~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~--------------~~~~~~~~~~SPDG~~La~~~~ 262 (429)
T PRK03629 197 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--------------FPRHNGAPAFSPDGSKLAFALS 262 (429)
T ss_pred CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccC--------------CCCCcCCeEECCCCCEEEEEEc
Confidence 345688999999999986543 235689999987643211000 01234568999999977754 4
Q ss_pred CCC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec---ceEEE--ECCCCc
Q psy2085 121 IEG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD---DDQAW--TKEIKK 190 (358)
Q Consensus 121 ~DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD---~IKIW--D~~tG~ 190 (358)
.+| .|.+||+.++........+ ..+ ....|+|||+.|+ ++| ...|| |..+|+
T Consensus 263 ~~g~~~I~~~d~~tg~~~~lt~~~-~~~-----------------~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~ 322 (429)
T PRK03629 263 KTGSLNLYVMDLASGQIRQVTDGR-SNN-----------------TEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA 322 (429)
T ss_pred CCCCcEEEEEECCCCCEEEccCCC-CCc-----------------CceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence 455 4888999887654332222 222 5689999999886 444 44555 676665
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.3e-06 Score=54.97 Aligned_cols=30 Identities=37% Similarity=0.702 Sum_probs=28.0
Q ss_pred CCCCeeEEEEcCCCCEEEEEeCCCeEEEEe
Q psy2085 100 YSSELNSIAINPVHQLICVGTIEGKVEAWD 129 (358)
Q Consensus 100 ~s~~In~i~~np~~~llasGs~DGtV~iWD 129 (358)
+.+.|++|+|+|++.+|++|+.||+|++||
T Consensus 10 h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 10 HSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp SSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 337899999999999999999999999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=8.6e-05 Score=75.30 Aligned_cols=117 Identities=13% Similarity=0.045 Sum_probs=73.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-C
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-E 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-D 122 (358)
+++...+.+|||||+.|+.+.+.++..+||.++.......+ +... ...+...+|+|++..|++.++ +
T Consensus 238 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-----------lt~~-~~~~~~~~wSpDG~~l~f~s~~~ 305 (427)
T PRK02889 238 FKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRR-----------LTQS-SGIDTEPFFSPDGRSIYFTSDRG 305 (427)
T ss_pred CCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCcEE-----------CCCC-CCCCcCeEEcCCCCEEEEEecCC
Confidence 55667789999999998777666777777765321111111 1111 023456789999998776664 5
Q ss_pred CeEEEEeCC--CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e----c-ceEEEECCCCc
Q psy2085 123 GKVEAWDPR--MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S----D-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~R--s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a----D-~IKIWD~~tG~ 190 (358)
|...+|.+. ++. ...+....... ....|+|+|++|+. + + .|.+||..+|+
T Consensus 306 g~~~Iy~~~~~~g~-~~~lt~~g~~~-----------------~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 306 GAPQIYRMPASGGA-AQRVTFTGSYN-----------------TSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred CCcEEEEEECCCCc-eEEEecCCCCc-----------------CceEECCCCCEEEEEEccCCcEEEEEEECCCCC
Confidence 777888653 333 22222111111 34789999999874 2 2 69999999887
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.1e-05 Score=53.44 Aligned_cols=37 Identities=22% Similarity=0.535 Sum_probs=31.7
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEE
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYE 74 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwD 74 (358)
++++.|. |...|++|+|+|++++| +||+.|++|+|||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~-~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFL-ASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEE-EEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccc-eeeCCCCEEEEEC
Confidence 4667775 77999999999999977 6677999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=6.2e-05 Score=76.32 Aligned_cols=115 Identities=14% Similarity=0.071 Sum_probs=73.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sGs 120 (358)
++..+.+.+|||||+.|+.+.. ..++|.+||+.+...... . ++.+.+.+.+|+|+++.|+ +.+
T Consensus 194 ~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l-------------~-~~~g~~~~~~~SPDG~~la~~~~ 259 (427)
T PRK02889 194 SPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVV-------------A-NFKGSNSAPAWSPDGRTLAVALS 259 (427)
T ss_pred CCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEe-------------e-cCCCCccceEECCCCCEEEEEEc
Confidence 4566889999999998865532 236799999986432110 0 0113456889999998776 567
Q ss_pred CCCeEEEEeC--CCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec---ceEEEEC--CCCc
Q psy2085 121 IEGKVEAWDP--RMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD---DDQAWTK--EIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~--Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD---~IKIWD~--~tG~ 190 (358)
.+|...+|.+ .++. +..|..+.... ....|+|||+.|+ ++| ...||.. .+|+
T Consensus 260 ~~g~~~Iy~~d~~~~~-~~~lt~~~~~~-----------------~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~ 319 (427)
T PRK02889 260 RDGNSQIYTVNADGSG-LRRLTQSSGID-----------------TEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA 319 (427)
T ss_pred cCCCceEEEEECCCCC-cEECCCCCCCC-----------------cCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence 7888888764 3333 34443322221 5578999999877 444 5566654 4444
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=98.12 E-value=7.3e-06 Score=89.21 Aligned_cols=130 Identities=12% Similarity=0.133 Sum_probs=92.0
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC--ceeeeeecc---CceEE--------EEEeec------------
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL--SMKFERCFD---SEVVT--------FEILSD------------ 98 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l--slk~~r~~d---~e~v~--------f~~LS~------------ 98 (358)
+++.|.+++|...-++|+|+|++.+++-|||++.. -+++..+.. ..++. ....++
T Consensus 160 ~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDl 239 (1049)
T KOG0307|consen 160 PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDL 239 (1049)
T ss_pred CcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecc
Confidence 56789999999999999999999999999999853 122211110 00111 011111
Q ss_pred -----------CCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceee
Q psy2085 99 -----------DYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSE 166 (358)
Q Consensus 99 -----------D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI 166 (358)
.|..+|.+++|++.. .+|+|++.|+.|-+|++.+++.++.+....+-. ..+
T Consensus 240 R~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~-----------------fdv 302 (1049)
T KOG0307|consen 240 RFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWC-----------------FDV 302 (1049)
T ss_pred cccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcce-----------------eee
Confidence 122688999998876 788888999999999999988888886533322 678
Q ss_pred EEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 167 EEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 167 ~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
.|+|-..-+++ -| .|-|+.+.++.
T Consensus 303 ~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 303 QWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eecCCCcchhhhheeccceeeeeeecCC
Confidence 99998775553 57 99999998765
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.3e-05 Score=83.91 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=83.9
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCcee--eeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEE
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSMK--FERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICV 118 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lslk--~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llas 118 (358)
.|.+.|++|.++|=+..++.|++ |-+|+||.-. ..+.. +.++ + ..|.+++|||.+. +|++
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~------------~---~~v~~vaWSptrpavF~~ 459 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSS------------P---DYVTDVAWSPTRPAVFAT 459 (555)
T ss_pred ccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhc------------c---ceeeeeEEcCcCceEEEE
Confidence 47889999999998887777766 7799999865 32211 1111 1 3489999999975 7889
Q ss_pred EeCCCeEEEEeCCCCce--eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCC
Q psy2085 119 GTIEGKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEI 188 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~t 188 (358)
+..||.|.+||++.... +.+...+.... +.+.|++.|+.|+..| ++.||++..
T Consensus 460 ~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l-----------------~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 460 VDGDGNLDIWDLLQDDEEPVLSQKVCSPAL-----------------TRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred EcCCCceehhhhhccccCCccccccccccc-----------------ceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 89999999999986653 44444332222 6688999999999877 999999864
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.2e-06 Score=83.20 Aligned_cols=175 Identities=17% Similarity=0.216 Sum_probs=108.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-----e--------------eccCceEEEEEeecCCC------
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-----R--------------CFDSEVVTFEILSDDYS------ 101 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-----r--------------~~d~e~v~f~~LS~D~s------ 101 (358)
.|+.+.|-|.+ ||+++++..|.++--|+....+--+ + |+....-.....||...
T Consensus 211 ~v~rLeFLPyH-fLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKi 289 (545)
T KOG1272|consen 211 RVARLEFLPYH-FLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKI 289 (545)
T ss_pred chhhhcccchh-heeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHH
Confidence 47788899987 7888888899999999876432100 0 00000011123344422
Q ss_pred ----CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 102 ----SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 102 ----~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++|++|++.|.|+++||.|-|..|+|||+|.-..+.++..+... ..++||..|-+.+|
T Consensus 290 LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a------------------~~ls~SqkglLA~~ 351 (545)
T KOG1272|consen 290 LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPA------------------SNLSLSQKGLLALS 351 (545)
T ss_pred HhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCc------------------cccccccccceeee
Confidence 89999999999999999999999999999998877766653222 66889988765556
Q ss_pred ec-ceEEEE-CCCCc-----EE---ec-CCCCC--ccccccch--------hHHh---hhccccceeecceeeeHHHHhh
Q psy2085 178 SD-DDQAWT-KEIKK-----TY---NL-GPAPK--WCGFLDNL--------TEEL---EENIIENVYDDYKFVTRQELED 233 (358)
Q Consensus 178 aD-~IKIWD-~~tG~-----~y---~l-gpap~--Wcsfldnl--------teel---e~~~~~~vyddy~fvt~~~l~~ 233 (358)
.. .|.||. .-.|. .| .+ ||.-. .|.|-|-| +--| +.+|.-..|.+-.|-|+.|-++
T Consensus 352 ~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsilVPGsGePN~Ds~e~nPfetrKQRqE 431 (545)
T KOG1272|consen 352 YGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSILVPGSGEPNYDSLEDNPFETRKQRQE 431 (545)
T ss_pred cCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeEeccCCCCCCcchhccCcchhhhHHhH
Confidence 55 999994 33322 34 22 22211 46554433 1001 1113345566778888776665
Q ss_pred cCCCccc
Q psy2085 234 LGLGHLI 240 (358)
Q Consensus 234 l~l~~li 240 (358)
..+-.|.
T Consensus 432 ~EVr~LL 438 (545)
T KOG1272|consen 432 KEVRSLL 438 (545)
T ss_pred HHHHHHH
Confidence 5444443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=9.7e-06 Score=78.38 Aligned_cols=81 Identities=12% Similarity=0.190 Sum_probs=65.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee--cCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS--DDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS--~D~s~~In~i~~np~~~llasGs 120 (358)
.|..+||.|+|.|+.-.|+.+|+-|..||+|++++...- +++. ..|.+.|.+|+|++++..|++||
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv------------~VfGG~egHrdeVLSvD~~~~gd~i~ScG 200 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCV------------AVFGGVEGHRDEVLSVDFSLDGDRIASCG 200 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEE------------EEecccccccCcEEEEEEcCCCCeeeccC
Confidence 466899999999998777788999999999999875321 1111 23447899999999999999999
Q ss_pred CCCeEEEEeCCCCce
Q psy2085 121 IEGKVEAWDPRMKVK 135 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~ 135 (358)
.|.++++|++.+.+-
T Consensus 201 mDhslk~W~l~~~~f 215 (385)
T KOG1034|consen 201 MDHSLKLWRLNVKEF 215 (385)
T ss_pred CcceEEEEecChhHH
Confidence 999999999986653
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.09 E-value=2.2e-05 Score=79.54 Aligned_cols=94 Identities=18% Similarity=0.360 Sum_probs=64.3
Q ss_pred cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC
Q psy2085 22 GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS 101 (358)
Q Consensus 22 ~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s 101 (358)
.+|-|--|.+-+.-|.+-.+ .+.+++|+|||||.+| |.|+.|+.|.||-+.....++.|--... -
T Consensus 427 ~G~w~V~d~e~~~lv~~~~d---~~~ls~v~ysp~G~~l-Avgs~d~~iyiy~Vs~~g~~y~r~~k~~--------g--- 491 (626)
T KOG2106|consen 427 TGRWFVLDTETQDLVTIHTD---NEQLSVVRYSPDGAFL-AVGSHDNHIYIYRVSANGRKYSRVGKCS--------G--- 491 (626)
T ss_pred cceEEEEecccceeEEEEec---CCceEEEEEcCCCCEE-EEecCCCeEEEEEECCCCcEEEEeeeec--------C---
Confidence 34444444444333333333 6789999999999987 7899999999999987655544321110 0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
..|..++|++++++|.+-|-|=.|-+|++
T Consensus 492 s~ithLDwS~Ds~~~~~~S~d~eiLyW~~ 520 (626)
T KOG2106|consen 492 SPITHLDWSSDSQFLVSNSGDYEILYWKP 520 (626)
T ss_pred ceeEEeeecCCCceEEeccCceEEEEEcc
Confidence 45788888888888888787878888855
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=0.0002 Score=72.66 Aligned_cols=115 Identities=13% Similarity=0.056 Sum_probs=74.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.+...+|||||+.|+.+.+.++ .|.+||+.+..++ +-+. +.+.....+|+|++..|++.+.
T Consensus 244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~--~Lt~------------~~~~~~~~~~spDG~~i~f~s~ 309 (435)
T PRK05137 244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTT--RLTD------------SPAIDTSPSYSPDGSQIVFESD 309 (435)
T ss_pred CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCceE--EccC------------CCCccCceeEcCCCCEEEEEEC
Confidence 5667788999999999876665544 4677787654321 1111 0023456899999998887764
Q ss_pred -CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e---c-ceEEEECCCCc
Q psy2085 122 -EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S---D-DDQAWTKEIKK 190 (358)
Q Consensus 122 -DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a---D-~IKIWD~~tG~ 190 (358)
+| .|.+||+.++.. ..+....... ....|+|+|+.|+. . + .|.+||..++.
T Consensus 310 ~~g~~~Iy~~d~~g~~~-~~lt~~~~~~-----------------~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~ 369 (435)
T PRK05137 310 RSGSPQLYVMNADGSNP-RRISFGGGRY-----------------STPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG 369 (435)
T ss_pred CCCCCeEEEEECCCCCe-EEeecCCCcc-----------------cCeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 34 577888766543 3333221111 45789999999873 2 2 68888986554
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=8e-05 Score=75.56 Aligned_cols=115 Identities=10% Similarity=0.032 Sum_probs=74.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEe--cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGI--YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~--~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sGs 120 (358)
+...+.+.+|||||++|+.+.. ..++|.+||+.+...+... +..+...+++|+|+++.|+ +.+
T Consensus 202 ~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~--------------~~~g~~~~~~~SpDG~~l~~~~s 267 (433)
T PRK04922 202 SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVA--------------SFRGINGAPSFSPDGRRLALTLS 267 (433)
T ss_pred CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEec--------------cCCCCccCceECCCCCEEEEEEe
Confidence 3456788999999998865532 2357999999764321100 0012344789999998665 445
Q ss_pred CCC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 121 IEG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
.+| .|.+||+.++.. ..+..+.... ....|+|||+.|+ ++| .|.++|+.+|+
T Consensus 268 ~~g~~~Iy~~d~~~g~~-~~lt~~~~~~-----------------~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~ 327 (433)
T PRK04922 268 RDGNPEIYVMDLGSRQL-TRLTNHFGID-----------------TEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGS 327 (433)
T ss_pred CCCCceEEEEECCCCCe-EECccCCCCc-----------------cceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 555 599999988764 3343332221 4689999999887 454 46667777766
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00013 Score=73.58 Aligned_cols=115 Identities=13% Similarity=0.028 Sum_probs=75.0
Q ss_pred CCCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE-Ee
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV-GT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas-Gs 120 (358)
+...+...+|||||++|+.++.. .++|.+||+.+...+.... +.+.+.+.+|+|+++.|+. .+
T Consensus 197 ~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~--------------~~g~~~~~~~SpDG~~la~~~~ 262 (430)
T PRK00178 197 SREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITN--------------FEGLNGAPAWSPDGSKLAFVLS 262 (430)
T ss_pred CCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccC--------------CCCCcCCeEECCCCCEEEEEEc
Confidence 34567889999999998765422 3579999997653221100 0123456899999987764 44
Q ss_pred CCC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 121 IEG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
.+| .|.+||+.++... .|..+.... ....|+|||+.|+ +++ .|.+||+.+|+
T Consensus 263 ~~g~~~Iy~~d~~~~~~~-~lt~~~~~~-----------------~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~ 322 (430)
T PRK00178 263 KDGNPEIYVMDLASRQLS-RVTNHPAID-----------------TEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR 322 (430)
T ss_pred cCCCceEEEEECCCCCeE-EcccCCCCc-----------------CCeEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 455 5777899887643 333222211 4578999999876 443 67888888776
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.05 E-value=7.3e-05 Score=82.28 Aligned_cols=72 Identities=24% Similarity=0.319 Sum_probs=55.2
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC-ccccccCCCccccccCCCceeeEEcCC---CCEEEE
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN-CISNERDTEEKEGKASSDESSEEEEEE---EEEEES 177 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~v~~~~~i~gl~GtRs~~P~sI~fs~d---~~~llS 177 (358)
+.|++++++|.++.+++|+..|.+-+||+|=+.++.....+.. ++ ..+..+|- +..+++
T Consensus 1196 G~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i-----------------~~v~~~~~~~~~S~~vs 1258 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPI-----------------RHVWLCPTYPQESVSVS 1258 (1431)
T ss_pred cceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCc-----------------ceEEeeccCCCCceEEE
Confidence 7899999999999999999999999999999988877764332 12 55555543 334443
Q ss_pred --e--c-ceEEEECCCCc
Q psy2085 178 --S--D-DDQAWTKEIKK 190 (358)
Q Consensus 178 --a--D-~IKIWD~~tG~ 190 (358)
. - -|-+|++.+|.
T Consensus 1259 ~~~~~~nevs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1259 AGSSSNNEVSTWNMETGL 1276 (1431)
T ss_pred ecccCCCceeeeecccCc
Confidence 2 3 89999999987
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=0.00017 Score=76.98 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=53.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.||-++-.++++..|-.... .+.. +..+-|. |...|+++.||+||.||+ ||+..+-+-+|.+.+...+|
T Consensus 218 ~~~Aa~d~dGrI~vw~d~~~----~~~~-----~t~t~lHWH~~~V~~L~fS~~G~~Ll-SGG~E~VLv~Wq~~T~~kqf 287 (792)
T KOG1963|consen 218 RYLAAGDSDGRILVWRDFGS----SDDS-----ETCTLLHWHHDEVNSLSFSSDGAYLL-SGGREGVLVLWQLETGKKQF 287 (792)
T ss_pred ceEEEeccCCcEEEEecccc----cccc-----ccceEEEecccccceeEEecCCceEe-ecccceEEEEEeecCCCccc
Confidence 46667777788888873221 1111 2233343 567899999999999996 56688999999999876556
Q ss_pred eeeccCceEEE
Q psy2085 83 ERCFDSEVVTF 93 (358)
Q Consensus 83 ~r~~d~e~v~f 93 (358)
.-.+.+.+..+
T Consensus 288 LPRLgs~I~~i 298 (792)
T KOG1963|consen 288 LPRLGSPILHI 298 (792)
T ss_pred ccccCCeeEEE
Confidence 54444444333
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00015 Score=72.30 Aligned_cols=114 Identities=14% Similarity=0.041 Sum_probs=73.8
Q ss_pred CCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EEeC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VGTI 121 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sGs~ 121 (358)
...+.+.+|||||++|+.+... .++|.+||+.+...+.... ..+.+.+++|+|+++.|+ +.+.
T Consensus 189 ~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~--------------~~~~~~~~~~spDg~~l~~~~~~ 254 (417)
T TIGR02800 189 REPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVAS--------------FPGMNGAPAFSPDGSKLAVSLSK 254 (417)
T ss_pred CCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeec--------------CCCCccceEECCCCCEEEEEECC
Confidence 3457888999999998765432 2589999998643221100 013456789999998665 4444
Q ss_pred CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 122 EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 122 DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
+| .|.+||+.++.. ..+..+.... ....|+|+|++|+ +++ .|.+||+.+++
T Consensus 255 ~~~~~i~~~d~~~~~~-~~l~~~~~~~-----------------~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~ 313 (417)
T TIGR02800 255 DGNPDIYVMDLDGKQL-TRLTNGPGID-----------------TEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE 313 (417)
T ss_pred CCCccEEEEECCCCCE-EECCCCCCCC-----------------CCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 44 588889887753 3333222221 4578999999876 333 57778888776
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00038 Score=69.38 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=73.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.+.+++|||||+.|+.+.+.+ +.|.+||+.+...+ +-.. +.......+|+|+++.|++++.
T Consensus 232 ~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~--~l~~------------~~~~~~~~~~s~dg~~l~~~s~ 297 (417)
T TIGR02800 232 FPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT--RLTN------------GPGIDTEPSWSPDGKSIAFTSD 297 (417)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE--ECCC------------CCCCCCCEEECCCCCEEEEEEC
Confidence 445667799999999887665433 46888888754321 1110 0022346689999998776665
Q ss_pred -CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c----ceEEEECCCCc
Q psy2085 122 -EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D----DDQAWTKEIKK 190 (358)
Q Consensus 122 -DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D----~IKIWD~~tG~ 190 (358)
+| .|.+||+.+++. ..+..+.... ..+.|+|+|++|+.+ + .|.+||+.++.
T Consensus 298 ~~g~~~iy~~d~~~~~~-~~l~~~~~~~-----------------~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 298 RGGSPQIYMMDADGGEV-RRLTFRGGYN-----------------ASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred CCCCceEEEEECCCCCE-EEeecCCCCc-----------------cCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 33 577788877653 3333222221 568899999988742 2 68889988765
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=9.9e-06 Score=81.65 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=39.1
Q ss_pred ccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 31 DIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 31 ~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
.+.+|..|...++ |++.|+.|-|...|..| ++|+.+-+|-+||+...+
T Consensus 127 ~~vqr~~l~~kL~~H~GcVntV~FN~~Gd~l-~SgSDD~~vv~WdW~~~~ 175 (559)
T KOG1334|consen 127 LFVQRLRLQKKLNKHKGCVNTVHFNQRGDVL-ASGSDDLQVVVWDWVSGS 175 (559)
T ss_pred HHHHHhhhhhcccCCCCccceeeecccCcee-eccCccceEEeehhhccC
Confidence 3445667777775 89999999999999865 788899999999997543
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.5e-05 Score=80.57 Aligned_cols=111 Identities=20% Similarity=0.183 Sum_probs=79.4
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce-EEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
++|+++||+|.++ |+|..+|+|.||.=-..+. +.+. ..+.. |...|++++|+++|..|.|||..|..-
T Consensus 208 ~t~~~~spn~~~~-Aa~d~dGrI~vw~d~~~~~------~~~t~t~lHW----H~~~V~~L~fS~~G~~LlSGG~E~VLv 276 (792)
T KOG1963|consen 208 ITCVALSPNERYL-AAGDSDGRILVWRDFGSSD------DSETCTLLHW----HHDEVNSLSFSSDGAYLLSGGREGVLV 276 (792)
T ss_pred ceeEEeccccceE-EEeccCCcEEEEecccccc------ccccceEEEe----cccccceeEEecCCceEeecccceEEE
Confidence 8999999999987 6788899999997432110 1111 11111 115899999999999999999999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE--Eec-ceEEEECC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE--SSD-DDQAWTKE 187 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll--SaD-~IKIWD~~ 187 (358)
+|-+.++++ .-|.--.+++ ..|.+|||++... ..| .|.+-...
T Consensus 277 ~Wq~~T~~k-qfLPRLgs~I-----------------~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 277 LWQLETGKK-QFLPRLGSPI-----------------LHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred EEeecCCCc-ccccccCCee-----------------EEEEEcCCCCeEEEEecCceEEEEecc
Confidence 999999873 2232223344 7799999998654 478 77776653
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00015 Score=74.24 Aligned_cols=115 Identities=10% Similarity=0.014 Sum_probs=73.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE-Ee
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV-GT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas-Gs 120 (358)
.+..+.+.+|||||++|+.+...+ ++|.+||+.+...+.... ..+.....+|+|++..|+. .+
T Consensus 216 ~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~--------------~~g~~~~~~wSPDG~~La~~~~ 281 (448)
T PRK04792 216 SPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTS--------------FPGINGAPRFSPDGKKLALVLS 281 (448)
T ss_pred CCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecC--------------CCCCcCCeeECCCCCEEEEEEe
Confidence 345677899999999987654322 468888987643211100 0123457899999986654 56
Q ss_pred CCCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 121 IEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
.+|. |.+||+.+++. ..+..+.... ....|+|||+.|+ +++ .|.++|..+|+
T Consensus 282 ~~g~~~Iy~~dl~tg~~-~~lt~~~~~~-----------------~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~ 341 (448)
T PRK04792 282 KDGQPEIYVVDIATKAL-TRITRHRAID-----------------TEPSWHPDGKSLIFTSERGGKPQIYRVNLASGK 341 (448)
T ss_pred CCCCeEEEEEECCCCCe-EECccCCCCc-----------------cceEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 6775 67778877754 3333222211 5688999999886 343 67777888776
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00012 Score=79.81 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=70.5
Q ss_pred EEEEEEecCCeEEEEEcCCCc---e--eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCC
Q psy2085 59 YVLSTGIYKPRVRCYETDNLS---M--KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 59 ~LlatG~~d~~IrvwDl~~ls---l--k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs 132 (358)
-++++|-.||.||+||.+--. + ....|.+- .+|..+.+.+.|- -|++|+.||.|++||+|.
T Consensus 1222 n~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~-------------~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1222 NIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDV-------------EPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred ceEEEeecCCceEEeecccCCccccceeecccCCc-------------ccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 366788899999999976321 1 11222211 3489999998764 499999999999999998
Q ss_pred CceeEEEe--CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECC
Q psy2085 133 KVKAGTLD--CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKE 187 (358)
Q Consensus 133 ~~~i~~L~--~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~ 187 (358)
......++ .|....+ .. +.+..|++...|+|+. .|+||++.
T Consensus 1289 ~~~e~~~~iv~~~~yGs---~l-----------Tal~VH~hapiiAsGs~q~ikIy~~~ 1333 (1387)
T KOG1517|consen 1289 SSKETFLTIVAHWEYGS---AL-----------TALTVHEHAPIIASGSAQLIKIYSLS 1333 (1387)
T ss_pred CcccccceeeeccccCc---cc-----------eeeeeccCCCeeeecCcceEEEEecC
Confidence 64443333 2221000 01 6789999999999865 99999986
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=97.92 E-value=4.9e-05 Score=73.77 Aligned_cols=120 Identities=21% Similarity=0.313 Sum_probs=85.8
Q ss_pred EEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEE
Q psy2085 50 SVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAW 128 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iW 128 (358)
=++|||+|+||++...| ++-|=|+.++.+... |..| +.|.-|.|..+.- +|+...-|+.|.+|
T Consensus 13 ~c~fSp~g~yiAs~~~y--rlviRd~~tlq~~ql---------f~cl-----dki~yieW~ads~~ilC~~yk~~~vqvw 76 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY--RLVIRDSETLQLHQL---------FLCL-----DKIVYIEWKADSCHILCVAYKDPKVQVW 76 (447)
T ss_pred ceeECCCCCeeeeeeee--EEEEeccchhhHHHH---------HHHH-----HHhhheeeeccceeeeeeeeccceEEEE
Confidence 57899999999766555 788888887543210 0011 3567778887654 45555679999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCcE------------E
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKKT------------Y 192 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~~------------y 192 (358)
++....--..++....++ .++.|||||+.|+. -| .|.+|.+.|.+. |
T Consensus 77 sl~Qpew~ckIdeg~agl-----------------s~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~ 139 (447)
T KOG4497|consen 77 SLVQPEWYCKIDEGQAGL-----------------SSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGY 139 (447)
T ss_pred EeecceeEEEeccCCCcc-----------------eeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeE
Confidence 998887778888766555 77999999987773 36 999999988762 3
Q ss_pred ecCCCCCccc
Q psy2085 193 NLGPAPKWCG 202 (358)
Q Consensus 193 ~lgpap~Wcs 202 (358)
++.|..+.|.
T Consensus 140 ~f~~dg~f~a 149 (447)
T KOG4497|consen 140 AFHPDGQFCA 149 (447)
T ss_pred EECCCCceee
Confidence 6666666554
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.0017 Score=64.97 Aligned_cols=149 Identities=14% Similarity=0.153 Sum_probs=92.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.|+|..+.+..+-.|+-... +++..+.......++++||||+|+++++..+++|.|+|..++...
T Consensus 49 r~~yv~~rdg~vsviD~~~~-------------~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v-- 113 (369)
T PF02239_consen 49 RYLYVANRDGTVSVIDLATG-------------KVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPV-- 113 (369)
T ss_dssp SEEEEEETTSEEEEEETTSS-------------SEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EE--
T ss_pred CEEEEEcCCCeEEEEECCcc-------------cEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEeccccccce--
Confidence 57888888877777772222 144455555668999999999999988888999999999876432
Q ss_pred eeccCceEEEEEeec-CCCCCeeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcee--EEEeCCCCccccccCCCcccccc
Q psy2085 84 RCFDSEVVTFEILSD-DYSSELNSIAINPVHQLICVGT-IEGKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 84 r~~d~e~v~f~~LS~-D~s~~In~i~~np~~~llasGs-~DGtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
+..... -+.. .-.+.+.+|..+|.+..++..- +-|.|-+-|......+ ..+.....+
T Consensus 114 ~~I~~~-----~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~-------------- 174 (369)
T PF02239_consen 114 KTIPTG-----GMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFP-------------- 174 (369)
T ss_dssp EEEE-------EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTE--------------
T ss_pred eecccc-----cccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccc--------------
Confidence 211100 0000 0014677888889888655544 4577777787665433 444443322
Q ss_pred CCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
....|+|++++++. .+ .|-++|..+++
T Consensus 175 ----~D~~~dpdgry~~va~~~sn~i~viD~~~~k 205 (369)
T PF02239_consen 175 ----HDGGFDPDGRYFLVAANGSNKIAVIDTKTGK 205 (369)
T ss_dssp ----EEEEE-TTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred ----cccccCcccceeeecccccceeEEEeeccce
Confidence 67899999998774 23 88899998876
|
... |
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00037 Score=70.92 Aligned_cols=128 Identities=19% Similarity=0.181 Sum_probs=78.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEE--EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC--
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCY--ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE-- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~Irvw--Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D-- 122 (358)
.....+|||||++|+.++..++..+|| ++....... ..+.... ..+....|+|+++.|+..+.+
T Consensus 282 ~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~-----------~~lt~~~-~~~~~p~wSPDG~~Laf~~~~~g 349 (428)
T PRK01029 282 TQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP-----------RLLTKKY-RNSSCPAWSPDGKKIAFCSVIKG 349 (428)
T ss_pred CcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce-----------EEeccCC-CCccceeECCCCCEEEEEEcCCC
Confidence 345789999999987665445544555 443211100 0111111 345678999999988776543
Q ss_pred -CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee----c-ceEEEECCCCcEE---
Q psy2085 123 -GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS----D-DDQAWTKEIKKTY--- 192 (358)
Q Consensus 123 -GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa----D-~IKIWD~~tG~~y--- 192 (358)
..|.+||+.+++.. .|......+ ....|+|||+.|+ ++ . .|.+||+.+|+..
T Consensus 350 ~~~I~v~dl~~g~~~-~Lt~~~~~~-----------------~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 350 VRQICVYDLATGRDY-QLTTSPENK-----------------ESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred CcEEEEEECCCCCeE-EccCCCCCc-----------------cceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 36899999888653 332211111 5589999999887 32 2 7889999888732
Q ss_pred -ecC--CCCCccccc
Q psy2085 193 -NLG--PAPKWCGFL 204 (358)
Q Consensus 193 -~lg--pap~Wcsfl 204 (358)
..| -.|.|..|.
T Consensus 412 ~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 412 IGSGEKRFPSWGAFP 426 (428)
T ss_pred cCCCcccCceecCCC
Confidence 222 256676554
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0003 Score=79.22 Aligned_cols=138 Identities=13% Similarity=0.049 Sum_probs=86.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce--EEEEEeecCCC------CCeeEEEEcCCCCEEEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV--VTFEILSDDYS------SELNSIAINPVHQLICVG 119 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~--v~f~~LS~D~s------~~In~i~~np~~~llasG 119 (358)
.+.|+|+|||++|.++.+.+++|++||+.+.......+.+... ..+.+-..|.. ..-..|+++|++.++++.
T Consensus 742 P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD 821 (1057)
T PLN02919 742 PSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD 821 (1057)
T ss_pred ccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence 3569999999988888788899999999864322111111000 00000000100 123688999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc-cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK-ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt-Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+++|++||+.++... ++.+.... .+ .+|.... .-..|..|+++++|+.+++ .+ .|++||+.+++
T Consensus 822 s~N~rIrviD~~tg~v~-tiaG~G~~---G~-~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~ 891 (1057)
T PLN02919 822 SYNHKIKKLDPATKRVT-TLAGTGKA---GF-KDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE 891 (1057)
T ss_pred CCCCEEEEEECCCCeEE-EEeccCCc---CC-CCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 99999999999887654 33221110 00 0111000 1234588999999987665 34 99999999886
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00012 Score=72.10 Aligned_cols=123 Identities=13% Similarity=0.082 Sum_probs=93.5
Q ss_pred CCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeee-eccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFER-CFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGT 120 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r-~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs 120 (358)
..+..+.-+|...+|+|+|+-. ..++|||+.+....|.. +.....+...+ | -.+..+.|-|. +..||+++
T Consensus 149 ~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrV--P---vW~tdi~Fl~g~~~~~fat~T 223 (412)
T KOG3881|consen 149 PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRV--P---VWITDIRFLEGSPNYKFATIT 223 (412)
T ss_pred CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCcccccee--e---eeeccceecCCCCCceEEEEe
Confidence 4577888899999999999877 78999999986333331 11111111110 1 24778888777 88999999
Q ss_pred CCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
--|.|+++|++.+ +++.+++...+++ .++...|+|++|+++| .+..+|.++|+
T Consensus 224 ~~hqvR~YDt~~qRRPV~~fd~~E~~i-----------------s~~~l~p~gn~Iy~gn~~g~l~~FD~r~~k 280 (412)
T KOG3881|consen 224 RYHQVRLYDTRHQRRPVAQFDFLENPI-----------------SSTGLTPSGNFIYTGNTKGQLAKFDLRGGK 280 (412)
T ss_pred cceeEEEecCcccCcceeEeccccCcc-----------------eeeeecCCCcEEEEecccchhheecccCce
Confidence 9999999999976 4688888776666 6788899999999988 89999999887
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=97.87 E-value=0.00012 Score=70.79 Aligned_cols=155 Identities=13% Similarity=0.108 Sum_probs=95.5
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeec
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCF 86 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~ 86 (358)
++|.|+++-.|- +..+..+...+.|+ +++.++.+|+|||.+.. +|+|+.-..|.||-.++..-= ...|+
T Consensus 72 tcs~drnayVw~------~~~~~~WkptlvLl---RiNrAAt~V~WsP~enk-FAVgSgar~isVcy~E~ENdWWVsKhi 141 (361)
T KOG1523|consen 72 TCSHDRNAYVWT------QPSGGTWKPTLVLL---RINRAATCVKWSPKENK-FAVGSGARLISVCYYEQENDWWVSKHI 141 (361)
T ss_pred EccCCCCccccc------cCCCCeeccceeEE---EeccceeeEeecCcCce-EEeccCccEEEEEEEecccceehhhhh
Confidence 455566666555 22344444555555 47889999999999975 577877788999987653210 11222
Q ss_pred cCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc-cc----cCC
Q psy2085 87 DSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE-GK----ASS 161 (358)
Q Consensus 87 d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~-Gt----Rs~ 161 (358)
...+- +.|++++|+|++-|||+||.||..+++..- |..++-...+.... .-+. |. -+.
T Consensus 142 kkPir----------Stv~sldWhpnnVLlaaGs~D~k~rVfSay----IK~Vdekpap~pWg---sk~PFG~lm~E~~~ 204 (361)
T KOG1523|consen 142 KKPIR----------STVTSLDWHPNNVLLAAGSTDGKCRVFSAY----IKGVDEKPAPTPWG---SKMPFGQLMSEASS 204 (361)
T ss_pred CCccc----------cceeeeeccCCcceecccccCcceeEEEEe----eeccccCCCCCCCc---cCCcHHHHHHhhcc
Confidence 22111 579999999999999999999999998632 22222111110000 0000 11 001
Q ss_pred Cc---eeeEEcCCCCEEE--Eec-ceEEEECCCC
Q psy2085 162 DE---SSEEEEEEEEEEE--SSD-DDQAWTKEIK 189 (358)
Q Consensus 162 ~P---~sI~fs~d~~~ll--SaD-~IKIWD~~tG 189 (358)
.+ ..+.|+|+|..|+ +.| ++-+=|....
T Consensus 205 ~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p 238 (361)
T KOG1523|consen 205 SGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGP 238 (361)
T ss_pred CCCceeeeEeCCCCCEeeEecCCCceEEeecCCC
Confidence 11 7899999999987 467 8888776543
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.87 E-value=4.1e-05 Score=86.85 Aligned_cols=115 Identities=17% Similarity=0.240 Sum_probs=84.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee---------cC-CC--------------
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS---------DD-YS-------------- 101 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS---------~D-~s-------------- 101 (358)
..|++++|+.+|... +.+..||.+-+|.+......--++++....+|.+++ +| +.
T Consensus 2252 s~vtr~~f~~qGnk~-~i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~ 2330 (2439)
T KOG1064|consen 2252 SRVTRSRFNHQGNKF-GIVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSL 2330 (2439)
T ss_pred chhhhhhhcccCCce-eeeccCCceeecccCCcceeccccCCccccceeeeehhhhccccCCCCCcccchhcccCcccce
Confidence 457888899998754 556778999999998543332345554455666653 11 11
Q ss_pred ------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 102 ------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 102 ------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
++++++++-|.+++|++||.+|.|++||+|.++.++++.. ++ ...++
T Consensus 2331 v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--------------------------~~-~~~~f 2383 (2439)
T KOG1064|consen 2331 VHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--------------------------LD-TREYF 2383 (2439)
T ss_pred eeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--------------------------hh-hhhee
Confidence 7899999999999999999999999999999987766643 22 23455
Q ss_pred EE--ec-ceEEEECCC
Q psy2085 176 ES--SD-DDQAWTKEI 188 (358)
Q Consensus 176 lS--aD-~IKIWD~~t 188 (358)
++ +- .||||++..
T Consensus 2384 ~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2384 VTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred eccCcccceEEEEccc
Confidence 54 44 999999975
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00014 Score=71.04 Aligned_cols=134 Identities=19% Similarity=0.225 Sum_probs=83.7
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEE--EEEeec--CCC------CCeeEEEEcCCCC-
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVT--FEILSD--DYS------SELNSIAINPVHQ- 114 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~--f~~LS~--D~s------~~In~i~~np~~~- 114 (358)
..+.+|.|..+|.+| |||+-+|+|-||.=.+.. + | ...+. |+...| ||- ..||.|.|.++++
T Consensus 26 diis~vef~~~Ge~L-atGdkgGRVv~f~r~~~~-~---~--ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~ 98 (433)
T KOG1354|consen 26 DIISAVEFDHYGERL-ATGDKGGRVVLFEREKLY-K---G--EYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNL 98 (433)
T ss_pred cceeeEEeecccceE-eecCCCCeEEEeeccccc-c---c--ceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCc
Confidence 468999999999987 899999999999855432 1 0 00111 111112 222 6799999998765
Q ss_pred -EEEEEeCCCeEEEEeCCCCceeE-EEeCCCCccccccCCCccc----cc---------c----CCCc---eeeEEcCCC
Q psy2085 115 -LICVGTIEGKVEAWDPRMKVKAG-TLDCAFNCISNERDTEEKE----GK---------A----SSDE---SSEEEEEEE 172 (358)
Q Consensus 115 -llasGs~DGtV~iWD~Rs~~~i~-~L~~~~~~v~~~~~i~gl~----Gt---------R----s~~P---~sI~fs~d~ 172 (358)
.+...+.|.+|++|-++.+..-. ....+... ....++.+. |. | ..++ ++|+++.|+
T Consensus 99 a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~--~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~ 176 (433)
T KOG1354|consen 99 AEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEG--PPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDK 176 (433)
T ss_pred cEEEEecCCcceeeeeeeccccccccccccccC--CCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCcc
Confidence 56677899999999987654221 00000000 000011100 00 1 1122 899999999
Q ss_pred CEEEEec--ceEEEECCC
Q psy2085 173 EEEESSD--DDQAWTKEI 188 (358)
Q Consensus 173 ~~llSaD--~IKIWD~~t 188 (358)
..++|+| .|.+|+++-
T Consensus 177 Et~lSADdLRINLWnlei 194 (433)
T KOG1354|consen 177 ETFLSADDLRINLWNLEI 194 (433)
T ss_pred ceEeeccceeeeeccccc
Confidence 9999998 999999864
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.7e-05 Score=71.36 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=67.9
Q ss_pred cceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC
Q psy2085 34 RRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV 112 (358)
Q Consensus 34 ~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~ 112 (358)
-++|-.|.+. |.-.+..++|+...--|+-||++|+.+.+||++-.. +|.-+. ..+ ++.+|.+|.-||-
T Consensus 153 ~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~n-~kv---------H~~GV~SI~ss~~ 221 (339)
T KOG0280|consen 153 MVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWHN-SKV---------HTSGVVSIYSSPP 221 (339)
T ss_pred eeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-ceeeec-cee---------eecceEEEecCCC
Confidence 4455555664 555689999998887788999999999999998221 222111 111 1267888888764
Q ss_pred -CCEEEEEeCCCeEEEEeCC-CCceeEE
Q psy2085 113 -HQLICVGTIEGKVEAWDPR-MKVKAGT 138 (358)
Q Consensus 113 -~~llasGs~DGtV~iWD~R-s~~~i~~ 138 (358)
...|+||+.|-.|++||.| .++++..
T Consensus 222 ~~~~I~TGsYDe~i~~~DtRnm~kPl~~ 249 (339)
T KOG0280|consen 222 KPTYIATGSYDECIRVLDTRNMGKPLFK 249 (339)
T ss_pred CCceEEEeccccceeeeehhcccCcccc
Confidence 6799999999999999999 5666643
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00026 Score=67.21 Aligned_cols=115 Identities=14% Similarity=0.013 Sum_probs=81.5
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
.+++.+|||++++.+.| ..++|-.|.+...+.+.++...+.. . +.--+.+||....++|+|+.||++.|
T Consensus 161 ~ns~~~snd~~~~~~Vg-ds~~Vf~y~id~~sey~~~~~~a~t-------~---D~gF~~S~s~~~~~FAv~~Qdg~~~I 229 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVG-DSRRVFRYAIDDESEYIENIYEAPT-------S---DHGFYNSFSENDLQFAVVFQDGTCAI 229 (344)
T ss_pred eeeeEEcCCCceEEEec-CCCcceEEEeCCccceeeeeEeccc-------C---CCceeeeeccCcceEEEEecCCcEEE
Confidence 78999999999987666 5789999999876655443211111 1 23457789999999999999999999
Q ss_pred EeCCCCc-eeEEEe----CCCCccccccCCCccccccCCCceeeEEcCCCC--EEE-Eec--ceEEEECCCCc
Q psy2085 128 WDPRMKV-KAGTLD----CAFNCISNERDTEEKEGKASSDESSEEEEEEEE--EEE-SSD--DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~-~i~~L~----~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~--~ll-SaD--~IKIWD~~tG~ 190 (358)
||+|.-. +..... .|.+++ ..+.|++-|. +|+ |-. .+.+-|+++++
T Consensus 230 ~DVR~~~tpm~~~sstrp~hnGa~-----------------R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~ 285 (344)
T KOG4532|consen 230 YDVRNMATPMAEISSTRPHHNGAF-----------------RVCRFSLYGLLDLLFISEHFSRVHVVDTRNYV 285 (344)
T ss_pred EEecccccchhhhcccCCCCCCce-----------------EEEEecCCCcceEEEEecCcceEEEEEcccCc
Confidence 9999754 333222 122222 7789998664 333 544 88899999887
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00036 Score=72.09 Aligned_cols=126 Identities=16% Similarity=0.144 Sum_probs=80.6
Q ss_pred ceeEEEEeeCCCCEeEEEEcCC-CCEEEEEE---ecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeE
Q psy2085 35 RIELIQDFEMPGVSTSVRISPD-GQYVLSTG---IYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNS 106 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpD-G~~LlatG---~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~ 106 (358)
++|++-...-+..--++.||-. ...|.+.. +.++ .-.+|++....++ |- .|.-..+ .+.|.|
T Consensus 195 klEvL~yirTE~dPl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klq--rv----svtsipL----~s~v~~ 264 (545)
T PF11768_consen 195 KLEVLSYIRTENDPLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQ--RV----SVTSIPL----PSQVIC 264 (545)
T ss_pred cEEEEEEEEecCCcEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCcee--EE----EEEEEec----CCcceE
Confidence 6788877765544577788873 33333331 1122 2346776643332 11 1111111 157999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEE
Q psy2085 107 IAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQA 183 (358)
Q Consensus 107 i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKI 183 (358)
+++||+...|+.|+.||+|.+||..++....+ ....-+ +.|+|||+|..++. .+ -+.+
T Consensus 265 ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P------------------~~iaWHp~gai~~V~s~qGelQ~ 325 (545)
T PF11768_consen 265 CARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIP------------------TLIAWHPDGAIFVVGSEQGELQC 325 (545)
T ss_pred EecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccc------------------eEEEEcCCCcEEEEEcCCceEEE
Confidence 99999999999999999999999877643211 222212 77999999998886 44 9999
Q ss_pred EECCCC
Q psy2085 184 WTKEIK 189 (358)
Q Consensus 184 WD~~tG 189 (358)
||+.-+
T Consensus 326 FD~ALs 331 (545)
T PF11768_consen 326 FDMALS 331 (545)
T ss_pred EEeecC
Confidence 999643
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00029 Score=72.41 Aligned_cols=120 Identities=11% Similarity=-0.022 Sum_probs=91.6
Q ss_pred eeEEEEee---CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC
Q psy2085 36 IELIQDFE---MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV 112 (358)
Q Consensus 36 Ieliqdfe---~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~ 112 (358)
.|+-..|. |++.|+++.++.+-..| -|++.+.+|-.|+..+....+.-.-+ ...+.+++++|+
T Consensus 90 g~it~~~st~~h~~~v~~~~~~~~~~ci-yS~~ad~~v~~~~~~~~~~~~~~~~~-------------~~~~~sl~is~D 155 (541)
T KOG4547|consen 90 GEITAKLSTDKHYGNVNEILDAQRLGCI-YSVGADLKVVYILEKEKVIIRIWKEQ-------------KPLVSSLCISPD 155 (541)
T ss_pred CeEEEEEecCCCCCcceeeecccccCce-EecCCceeEEEEecccceeeeeeccC-------------CCccceEEEcCC
Confidence 36666665 88999999999887655 45667889999998765433221111 045789999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCC-----CCEEEEec----ceEE
Q psy2085 113 HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE-----EEEEESSD----DDQA 183 (358)
Q Consensus 113 ~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d-----~~~llSaD----~IKI 183 (358)
+.++++|+ ++|++||+.+++.+.++.+|.+++ .+++|--+ |.+++|.+ .|-+
T Consensus 156 ~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v-----------------~t~~f~~~~~g~~G~~vLssa~~~r~i~~ 216 (541)
T KOG4547|consen 156 GKILLTAS--RQIKVLDIETKEVVITFTGHGSPV-----------------RTLSFTTLIDGIIGKYVLSSAAAERGITV 216 (541)
T ss_pred CCEEEecc--ceEEEEEccCceEEEEecCCCcce-----------------EEEEEEEeccccccceeeeccccccceeE
Confidence 99999888 789999999999999999999988 77887765 78888733 7777
Q ss_pred EECCC
Q psy2085 184 WTKEI 188 (358)
Q Consensus 184 WD~~t 188 (358)
|-...
T Consensus 217 w~v~~ 221 (541)
T KOG4547|consen 217 WVVEK 221 (541)
T ss_pred EEEEc
Confidence 76543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.2e-05 Score=74.60 Aligned_cols=128 Identities=14% Similarity=0.234 Sum_probs=83.2
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCC-CCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPV-HQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~-~~llasGs~ 121 (358)
||-.+++|.|..|.+.++++ ++-+|.+|.+.-....|. +|+...-. .+-+.-|++-.|+|. ..++.-.++
T Consensus 171 H~yhiNSiS~NsD~et~lSa--DdLrINLWnl~i~D~sFn------IVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsS 242 (460)
T COG5170 171 HPYHINSISFNSDKETLLSA--DDLRINLWNLEIIDGSFN------IVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSS 242 (460)
T ss_pred ceeEeeeeeecCchheeeec--cceeeeeccccccCCceE------EEeccCccHHHHHHHHhhcccCHhHcceEEEecC
Confidence 56678999999999988754 467899999874322221 12211000 000145788899997 467888889
Q ss_pred CCeEEEEeCCCCcee----EEEeCCCCccccc------cCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECCCC
Q psy2085 122 EGKVEAWDPRMKVKA----GTLDCAFNCISNE------RDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKEIK 189 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i----~~L~~~~~~v~~~------~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~tG 189 (358)
.|+|++-|+|..... ..+....+++... .++ ..+.|+++|++|+|-| +|||||....
T Consensus 243 kG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSI-----------SD~kFs~ngryIlsRdyltvkiwDvnm~ 311 (460)
T COG5170 243 KGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSI-----------SDFKFSDNGRYILSRDYLTVKIWDVNMA 311 (460)
T ss_pred CCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhh-----------cceEEcCCCcEEEEeccceEEEEecccc
Confidence 999999999955421 1111111111111 122 6799999999999999 9999999754
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 312 k 312 (460)
T COG5170 312 K 312 (460)
T ss_pred c
Confidence 3
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0013 Score=64.52 Aligned_cols=174 Identities=15% Similarity=0.193 Sum_probs=103.3
Q ss_pred ccCcccCCCcccccceeEEEEeeC-------CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEE
Q psy2085 21 IGGRYLLPTNDIRRRIELIQDFEM-------PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTF 93 (358)
Q Consensus 21 ~~~r~lk~d~~~~~rIeliqdfe~-------~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f 93 (358)
..+-.++.|..++.-+.+++.-+. ..-+.++.|+|||+||+++.----+|.+|++.+..+... ..+
T Consensus 113 v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~--~~~----- 185 (346)
T COG2706 113 VSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPA--DPA----- 185 (346)
T ss_pred EEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccc--ccc-----
Confidence 344455666655555444443332 112889999999999987742223799999996554321 111
Q ss_pred EEeecCCCCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCCC-cee---EEEeC---CCCcc--ccc--cCCCc-------
Q psy2085 94 EILSDDYSSELNSIAINPVHQLICVGTI-EGKVEAWDPRMK-VKA---GTLDC---AFNCI--SNE--RDTEE------- 154 (358)
Q Consensus 94 ~~LS~D~s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs~-~~i---~~L~~---~~~~v--~~~--~~i~g------- 154 (358)
.+-++ .+-..|.|+|++++.-+-++ +++|.+|..... ..+ .++.. ..... .+. .+.+|
T Consensus 186 -~v~~G--~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasN 262 (346)
T COG2706 186 -EVKPG--AGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASN 262 (346)
T ss_pred -ccCCC--CCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEec
Confidence 11222 56789999999998777776 999999998763 222 22221 00000 000 01111
Q ss_pred -----cc--------cc---------cCCCceeeEEcCCCCEEEEe----cceEEE--ECCCCc-----EEecCCCCCcc
Q psy2085 155 -----KE--------GK---------ASSDESSEEEEEEEEEEESS----DDDQAW--TKEIKK-----TYNLGPAPKWC 201 (358)
Q Consensus 155 -----l~--------Gt---------Rs~~P~sI~fs~d~~~llSa----D~IKIW--D~~tG~-----~y~lgpap~Wc 201 (358)
|. |. -...|....|+++|++|+.+ |.|.|+ |..||+ .|.-+|.|.|.
T Consensus 263 Rg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv 342 (346)
T COG2706 263 RGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCV 342 (346)
T ss_pred CCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEE
Confidence 10 21 11236888899999998863 356665 556777 33678889887
Q ss_pred ccc
Q psy2085 202 GFL 204 (358)
Q Consensus 202 sfl 204 (358)
-|+
T Consensus 343 ~f~ 345 (346)
T COG2706 343 KFL 345 (346)
T ss_pred EEc
Confidence 775
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=97.77 E-value=5.1e-05 Score=78.23 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=57.7
Q ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE--EE
Q psy2085 99 DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE--EE 176 (358)
Q Consensus 99 D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~--ll 176 (358)
+|++.|.||++.|.|.+||+|++||+|++|.++++.|+.+..... .| .+|+|+|.+.. |+
T Consensus 398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~-~I-----------------~~vaw~P~~~~~vLA 459 (733)
T KOG0650|consen 398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDS-EI-----------------RSVAWNPLSDLCVLA 459 (733)
T ss_pred ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecc-ee-----------------EEEEecCCCCceeEE
Confidence 455889999999999999999999999999999999998887543 33 88999998763 22
Q ss_pred -Eec-ceEEEECCCCc
Q psy2085 177 -SSD-DDQAWTKEIKK 190 (358)
Q Consensus 177 -SaD-~IKIWD~~tG~ 190 (358)
+.+ .+-|-+..-|.
T Consensus 460 vA~~~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 460 VAVGECVLIVNPIFGD 475 (733)
T ss_pred EEecCceEEeCccccc
Confidence 234 65565655453
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00017 Score=74.55 Aligned_cols=78 Identities=18% Similarity=0.262 Sum_probs=61.6
Q ss_pred EeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+..++.+.|++++|+.+.+ +.|+.||.|.+||.....-++.+ ++ -..+.++|+|++.+|++|+
T Consensus 255 sipL~s~v~~ca~sp~E~kL-vlGC~DgSiiLyD~~~~~t~~~k---a~------------~~P~~iaWHp~gai~~V~s 318 (545)
T PF11768_consen 255 SIPLPSQVICCARSPSEDKL-VLGCEDGSIILYDTTRGVTLLAK---AE------------FIPTLIAWHPDGAIFVVGS 318 (545)
T ss_pred EEecCCcceEEecCcccceE-EEEecCCeEEEEEcCCCeeeeee---ec------------ccceEEEEcCCCcEEEEEc
Confidence 45678899999999999987 46788999999998754322211 11 1358899999999999999
Q ss_pred CCCeEEEEeCCCCc
Q psy2085 121 IEGKVEAWDPRMKV 134 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~ 134 (358)
+-|.+.+||+.-..
T Consensus 319 ~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 319 EQGELQCFDMALSP 332 (545)
T ss_pred CCceEEEEEeecCc
Confidence 99999999986543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00061 Score=68.15 Aligned_cols=100 Identities=9% Similarity=-0.019 Sum_probs=69.5
Q ss_pred EEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCe-eEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 59 YVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSEL-NSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 59 ~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~I-n~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
.++++-..+++|.|.|..+.... +... .. ..+ ..+.++|++..+.+++.||.|.++|+.+++.++
T Consensus 7 l~~V~~~~~~~v~viD~~t~~~~--~~i~-------~~-----~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~ 72 (369)
T PF02239_consen 7 LFYVVERGSGSVAVIDGATNKVV--ARIP-------TG-----GAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVA 72 (369)
T ss_dssp EEEEEEGGGTEEEEEETTT-SEE--EEEE--------S-----TTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEE
T ss_pred EEEEEecCCCEEEEEECCCCeEE--EEEc-------CC-----CCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEE
Confidence 34455566889999998864321 1111 00 122 446789999988888899999999999999999
Q ss_pred EEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 138 TLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
++.....+ ..+++++||++|+.+ + .+.|+|.++.+
T Consensus 73 ~i~~G~~~------------------~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle 111 (369)
T PF02239_consen 73 TIKVGGNP------------------RGIAVSPDGKYVYVANYEPGTVSVIDAETLE 111 (369)
T ss_dssp EEE-SSEE------------------EEEEE--TTTEEEEEEEETTEEEEEETTT--
T ss_pred EEecCCCc------------------ceEEEcCCCCEEEEEecCCCceeEecccccc
Confidence 99876655 779999999999853 3 99999999887
|
... |
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00028 Score=69.24 Aligned_cols=88 Identities=13% Similarity=0.175 Sum_probs=64.3
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
.+.+++|+=.| ..|++++|.+||..++.++-.+..|.|||+.+..+...+ ..+. +++.-+.|||++
T Consensus 185 ~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~----------~~gl---gg~slLkwSPdg 250 (445)
T KOG2139|consen 185 HHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI----------PKGL---GGFSLLKWSPDG 250 (445)
T ss_pred cchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc----------ccCC---CceeeEEEcCCC
Confidence 45566666555 469999999999977655545678999999876432211 0111 688899999999
Q ss_pred CEEEEEeCCCeEEEE-eCCCCce
Q psy2085 114 QLICVGTIEGKVEAW-DPRMKVK 135 (358)
Q Consensus 114 ~llasGs~DGtV~iW-D~Rs~~~ 135 (358)
..|.+++-|++.++| ..++-.+
T Consensus 251 d~lfaAt~davfrlw~e~q~wt~ 273 (445)
T KOG2139|consen 251 DVLFAATCDAVFRLWQENQSWTK 273 (445)
T ss_pred CEEEEecccceeeeehhccccee
Confidence 999889999999999 4444433
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0024 Score=65.37 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=70.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.....+|||||++|+.+.+.++ .|.++|+.+...+ +-.. . ...+...+|+|+++.|+..+.
T Consensus 260 ~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~--~lt~-----------~-~~~~~~p~wSpDG~~I~f~s~ 325 (448)
T PRK04792 260 FPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT--RITR-----------H-RAIDTEPSWHPDGKSLIFTSE 325 (448)
T ss_pred CCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE--ECcc-----------C-CCCccceEECCCCCEEEEEEC
Confidence 3555567899999999977665555 4777777654321 1110 0 023466789999987766554
Q ss_pred -CCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c---ceEEEECCCCc
Q psy2085 122 -EGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D---DDQAWTKEIKK 190 (358)
Q Consensus 122 -DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D---~IKIWD~~tG~ 190 (358)
+|. |.++|+.+++.. .|....... ....|+|||++|+- . + .|-++|+.+|+
T Consensus 326 ~~g~~~Iy~~dl~~g~~~-~Lt~~g~~~-----------------~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~ 385 (448)
T PRK04792 326 RGGKPQIYRVNLASGKVS-RLTFEGEQN-----------------LGGSITPDGRSMIMVNRTNGKFNIARQDLETGA 385 (448)
T ss_pred CCCCceEEEEECCCCCEE-EEecCCCCC-----------------cCeeECCCCCEEEEEEecCCceEEEEEECCCCC
Confidence 444 555677766542 332111111 34689999998873 2 2 45557888776
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00071 Score=68.91 Aligned_cols=119 Identities=9% Similarity=0.098 Sum_probs=70.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCC--eE--EEEEcCCCce-eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKP--RV--RCYETDNLSM-KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~--~I--rvwDl~~lsl-k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
+++.....+|||||++|+.+....+ .+ .+|++..... +..+ +....+ +.....+|+|++..|+.
T Consensus 229 ~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~----------lt~~~~-~~~~~p~wSPDG~~Laf 297 (428)
T PRK01029 229 LQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRR----------LLNEAF-GTQGNPSFSPDGTRLVF 297 (428)
T ss_pred CCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceE----------eecCCC-CCcCCeEECCCCCEEEE
Confidence 4555667899999999987653322 33 3356543210 1111 111111 23356799999997777
Q ss_pred Ee-CCCeEEEEeCCC---CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e----c-ceEEEECCC
Q psy2085 119 GT-IEGKVEAWDPRM---KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S----D-DDQAWTKEI 188 (358)
Q Consensus 119 Gs-~DGtV~iWD~Rs---~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a----D-~IKIWD~~t 188 (358)
.+ .+|...+|.+.. +.....+......+ ....|||||++|+. + . .|.+||+.+
T Consensus 298 ~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~-----------------~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~ 360 (428)
T PRK01029 298 VSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNS-----------------SCPAWSPDGKKIAFCSVIKGVRQICVYDLAT 360 (428)
T ss_pred EECCCCCceEEEEECcccccceEEeccCCCCc-----------------cceeECCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 66 477777775421 22233333222221 45789999998873 2 2 799999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
|+
T Consensus 361 g~ 362 (428)
T PRK01029 361 GR 362 (428)
T ss_pred CC
Confidence 87
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00038 Score=75.55 Aligned_cols=138 Identities=12% Similarity=0.039 Sum_probs=98.2
Q ss_pred EEEEeecCCceeeeeec--cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLVII--GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~--~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
|.++++.-.++-.|... ++- . .--.|.+.+-++.+|-||+|| +|.+.|.++|+|++.+...
T Consensus 147 ~i~~gsv~~~iivW~~~~dn~p-----~---------~l~GHeG~iF~i~~s~dg~~i-~s~SdDRsiRlW~i~s~~~-- 209 (967)
T KOG0974|consen 147 YIASGSVFGEIIVWKPHEDNKP-----I---------RLKGHEGSIFSIVTSLDGRYI-ASVSDDRSIRLWPIDSREV-- 209 (967)
T ss_pred EEEeccccccEEEEeccccCCc-----c---------eecccCCceEEEEEccCCcEE-EEEecCcceeeeecccccc--
Confidence 67778888888899832 221 0 334688999999999999998 5678899999999986421
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.+ .+.| .|+..|-.++|.|. .++|+++|-|.++|+.. +..+.+++.|...- +
T Consensus 210 ~~-----~~~f-----gHsaRvw~~~~~~n--~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~-----i---------- 261 (967)
T KOG0974|consen 210 LG-----CTGF-----GHSARVWACCFLPN--RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKG-----I---------- 261 (967)
T ss_pred cC-----cccc-----cccceeEEEEeccc--eeEEeccceEEEEEecc-cceehhhhhhhhcc-----e----------
Confidence 11 1111 23467888889997 99999999999999643 33444555554210 1
Q ss_pred ceeeEEcCCCCEEEEe--c-ceEEEECCC
Q psy2085 163 ESSEEEEEEEEEEESS--D-DDQAWTKEI 188 (358)
Q Consensus 163 P~sI~fs~d~~~llSa--D-~IKIWD~~t 188 (358)
-++..++....++|. | .+|+||...
T Consensus 262 -w~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 262 -WKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred -eEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 567788877777773 5 999999874
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0022 Score=61.28 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=23.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCC
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ 77 (358)
=+.++||||+..| |.+...|+|+|||+..
T Consensus 46 WRkl~WSpD~tlL-a~a~S~G~i~vfdl~g 74 (282)
T PF15492_consen 46 WRKLAWSPDCTLL-AYAESTGTIRVFDLMG 74 (282)
T ss_pred heEEEECCCCcEE-EEEcCCCeEEEEeccc
Confidence 4689999999865 5566789999999863
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.0031 Score=63.60 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=72.2
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.+...+|||||++|+.+.+.+ +.|.+||+.+...+ +-.+ . ........|+|++..|+..+.
T Consensus 241 ~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~--~lt~-----------~-~~~~~~~~~spDg~~i~f~s~ 306 (430)
T PRK00178 241 FEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS--RVTN-----------H-PAIDTEPFWGKDGRTLYFTSD 306 (430)
T ss_pred CCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE--Eccc-----------C-CCCcCCeEECCCCCEEEEEEC
Confidence 445566789999999987555433 46888898764321 1111 0 023445789999987766654
Q ss_pred -CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c---ceEEEECCCCc
Q psy2085 122 -EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D---DDQAWTKEIKK 190 (358)
Q Consensus 122 -DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D---~IKIWD~~tG~ 190 (358)
+| .|.+||+.+++.. .+....... ....|+|+|+.|+- . + .|.+||+.+|+
T Consensus 307 ~~g~~~iy~~d~~~g~~~-~lt~~~~~~-----------------~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 307 RGGKPQIYKVNVNGGRAE-RVTFVGNYN-----------------ARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred CCCCceEEEEECCCCCEE-EeecCCCCc-----------------cceEECCCCCEEEEEEccCCceEEEEEECCCCC
Confidence 34 5677787777632 232111110 34689999998873 2 2 58889998886
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00027 Score=72.83 Aligned_cols=101 Identities=10% Similarity=0.104 Sum_probs=76.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGt 124 (358)
+|++++|+.||-.+ +.|+..|.|-|||+.....-+... .+|.-+|..+.|.+. ...++| .+..+
T Consensus 230 svTal~F~d~gL~~-aVGts~G~v~iyDLRa~~pl~~kd------------h~~e~pi~~l~~~~~~~q~~v~S-~Dk~~ 295 (703)
T KOG2321|consen 230 SVTALKFRDDGLHV-AVGTSTGSVLIYDLRASKPLLVKD------------HGYELPIKKLDWQDTDQQNKVVS-MDKRI 295 (703)
T ss_pred cceEEEecCCceeE-EeeccCCcEEEEEcccCCceeecc------------cCCccceeeecccccCCCceEEe-cchHH
Confidence 49999999999775 789999999999998643222222 223357899999886 335555 55689
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD 179 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD 179 (358)
++|||..+|+....+....+ + +.+++-|++.+++++-
T Consensus 296 ~kiWd~~~Gk~~asiEpt~~-l-----------------ND~C~~p~sGm~f~An 332 (703)
T KOG2321|consen 296 LKIWDECTGKPMASIEPTSD-L-----------------NDFCFVPGSGMFFTAN 332 (703)
T ss_pred hhhcccccCCceeeccccCC-c-----------------CceeeecCCceEEEec
Confidence 99999999999888875333 3 7788899988888753
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0012 Score=63.89 Aligned_cols=120 Identities=12% Similarity=0.042 Sum_probs=84.0
Q ss_pred EEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 40 QDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 40 qdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
+.|. +.+.|+|.+|++|++.+ |.+.....|.||......+ ++ .+..|+ ++...|+.|+|+|..+-|.+
T Consensus 4 ~~~~~~~~pitchAwn~drt~i-Av~~~~~evhiy~~~~~~~-w~--------~~htls-~Hd~~vtgvdWap~snrIvt 72 (361)
T KOG1523|consen 4 VVFHRLLEPITCHAWNSDRTQI-AVSPNNHEVHIYSMLGADL-WE--------PAHTLS-EHDKIVTGVDWAPKSNRIVT 72 (361)
T ss_pred EEeeeccCceeeeeecCCCceE-EeccCCceEEEEEecCCCC-ce--------eceehh-hhCcceeEEeecCCCCceeE
Confidence 3443 56889999999999977 5556667899999765331 11 111222 22267999999999999999
Q ss_pred EeCCCeEEEEeCCCCce-e--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 119 GTIEGKVEAWDPRMKVK-A--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~-i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
|+.|..-.+|..+++.. . -+|.-++... +.|.|+|.+++++. .- .|-||-.+
T Consensus 73 cs~drnayVw~~~~~~~WkptlvLlRiNrAA-----------------t~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 73 CSHDRNAYVWTQPSGGTWKPTLVLLRINRAA-----------------TCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred ccCCCCccccccCCCCeeccceeEEEeccce-----------------eeEeecCcCceEEeccCccEEEEEEEe
Confidence 99999999999865532 2 2222222222 78999999999885 23 77787665
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0035 Score=61.78 Aligned_cols=141 Identities=16% Similarity=0.194 Sum_probs=85.9
Q ss_pred EEEeeCC--CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC--CCeeEEEEcCCCC
Q psy2085 39 IQDFEMP--GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--SELNSIAINPVHQ 114 (358)
Q Consensus 39 iqdfe~~--~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--~~In~i~~np~~~ 114 (358)
...+..| ..-+.+.|+|||+++.+++...++|.+|++.....++... -....+..++. .....|.++|+++
T Consensus 183 ~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~ispdg~ 257 (345)
T PF10282_consen 183 VDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEI-----QTISTLPEGFTGENAPAEIAISPDGR 257 (345)
T ss_dssp EEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEE-----EEEESCETTSCSSSSEEEEEE-TTSS
T ss_pred eeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEE-----EEeeeccccccccCCceeEEEecCCC
Confidence 3444444 3457899999999999999999999999998322222111 11122223333 2578899999998
Q ss_pred EEEE-EeCCCeEEEEeCC--CCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c--ceEEEE
Q psy2085 115 LICV-GTIEGKVEAWDPR--MKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D--DDQAWT 185 (358)
Q Consensus 115 llas-Gs~DGtV~iWD~R--s~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D--~IKIWD 185 (358)
.|.+ .-...+|-++++. ++. .+..+..... .|..+.|+|+|++|+.+ + .|.+|+
T Consensus 258 ~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~-----------------~Pr~~~~s~~g~~l~Va~~~s~~v~vf~ 320 (345)
T PF10282_consen 258 FLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGK-----------------FPRHFAFSPDGRYLYVANQDSNTVSVFD 320 (345)
T ss_dssp EEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSS-----------------SEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCC-----------------CccEEEEeCCCCEEEEEecCCCeEEEEE
Confidence 6544 4467899999983 233 2333332111 13889999999999853 2 777765
Q ss_pred --CCCCc-EE----ecCCCCCcc
Q psy2085 186 --KEIKK-TY----NLGPAPKWC 201 (358)
Q Consensus 186 --~~tG~-~y----~lgpap~Wc 201 (358)
.++|. .+ .-.|.|.|.
T Consensus 321 ~d~~tG~l~~~~~~~~~~~p~ci 343 (345)
T PF10282_consen 321 IDPDTGKLTPVGSSVPIPSPVCI 343 (345)
T ss_dssp EETTTTEEEEEEEEEESSSEEEE
T ss_pred EeCCCCcEEEecccccCCCCEEE
Confidence 46777 22 234666543
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00019 Score=70.88 Aligned_cols=82 Identities=18% Similarity=0.284 Sum_probs=60.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+..|+||||+++|+ |+.-|..|||=....-.. +-.|+. +|+..|..+++-++ ++|++||-|++|
T Consensus 152 Sml~dVavS~D~~~Ii-taDRDEkIRvs~ypa~f~---------Iesfcl---GH~eFVS~isl~~~-~~LlS~sGD~tl 217 (390)
T KOG3914|consen 152 SMLLDVAVSPDDQFII-TADRDEKIRVSRYPATFV---------IESFCL---GHKEFVSTISLTDN-YLLLSGSGDKTL 217 (390)
T ss_pred hhhheeeecCCCCEEE-EecCCceEEEEecCcccc---------hhhhcc---ccHhheeeeeeccC-ceeeecCCCCcE
Confidence 4578999999999885 678888999877664210 111221 23356788888664 468899999999
Q ss_pred EEEeCCCCceeEEEeC
Q psy2085 126 EAWDPRMKVKAGTLDC 141 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~ 141 (358)
++||.++++++.+++.
T Consensus 218 r~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 218 RLWDITSGKLLDTCDL 233 (390)
T ss_pred EEEecccCCcccccch
Confidence 9999999999877764
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0045 Score=62.88 Aligned_cols=113 Identities=13% Similarity=0.101 Sum_probs=83.9
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCC-eEEEEEcCCCcee-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKP-RVRCYETDNLSMK-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~-~IrvwDl~~lslk-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+++.|.-.++.-|++- ++.|++++ .+-|||..+..+| ++..+ +.|-++..+|+|..++.|..
T Consensus 358 ~~~~VrY~r~~~~~e~-~vigt~dgD~l~iyd~~~~e~kr~e~~l---------------g~I~av~vs~dGK~~vvaNd 421 (668)
T COG4946 358 KKGGVRYRRIQVDPEG-DVIGTNDGDKLGIYDKDGGEVKRIEKDL---------------GNIEAVKVSPDGKKVVVAND 421 (668)
T ss_pred CCCceEEEEEccCCcc-eEEeccCCceEEEEecCCceEEEeeCCc---------------cceEEEEEcCCCcEEEEEcC
Confidence 3455777777778774 46788888 8999998876543 11111 67999999999999999888
Q ss_pred CCeEEEEeCCCCceeEEEeC-CCCccccccCCCccccccCCCceeeEEcCCCCEEEEe------c-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDC-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS------D-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa------D-~IKIWD~~tG~ 190 (358)
.+.+-+.|+.+++. ..++- ....+ +.+.|||++++++=+ - .|||+|+.+|+
T Consensus 422 r~el~vididngnv-~~idkS~~~lI-----------------tdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~K 480 (668)
T COG4946 422 RFELWVIDIDNGNV-RLIDKSEYGLI-----------------TDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGK 480 (668)
T ss_pred ceEEEEEEecCCCe-eEeccccccee-----------------EEEEEcCCceeEEEecCcceeeeeEEEEecCCCe
Confidence 88888889988874 33332 22233 678999999999831 1 99999999888
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0018 Score=70.82 Aligned_cols=148 Identities=16% Similarity=0.161 Sum_probs=93.4
Q ss_pred cceEEEEeecCCceeeeee-ccCcccCCCcccccceeEEEEee-----CCC---CEeEEEEcCCCCEEEEEEecCCeEEE
Q psy2085 2 SVEYCYQTNWHKQAVTLVI-IGGRYLLPTNDIRRRIELIQDFE-----MPG---VSTSVRISPDGQYVLSTGIYKPRVRC 72 (358)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~~r~lk~d~~~~~rIeliqdfe-----~~~---~v~~v~~SpDG~~LlatG~~d~~Irv 72 (358)
..+-...+|.|+.+.-|.. ..+. .+.||..-+. .++ .---+.|-....+|++||. -..|||
T Consensus 1122 D~aLlLtas~dGvIRIwk~y~~~~---------~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd-~r~IRI 1191 (1387)
T KOG1517|consen 1122 DDALLLTASSDGVIRIWKDYADKW---------KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGD-VRSIRI 1191 (1387)
T ss_pred chhheeeeccCceEEEeccccccc---------CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCC-eeEEEE
Confidence 3455678899999999982 1111 2234443331 222 1233567777778888885 568999
Q ss_pred EEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCc--c
Q psy2085 73 YETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNC--I 146 (358)
Q Consensus 73 wDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~--v 146 (358)
||+.... ++ ... ..+.+ ..|++++-+-. +++|+.|-.||.|+++|.|...+ +.....|+.. |
T Consensus 1192 WDa~~E~-~~-~di--------P~~s~--t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~I 1259 (1387)
T KOG1517|consen 1192 WDAHKEQ-VV-ADI--------PYGSS--TLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPI 1259 (1387)
T ss_pred Eecccce-eE-eec--------ccCCC--ccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccc
Confidence 9997421 11 111 01111 45666666544 58999999999999999997654 4444445443 3
Q ss_pred ccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCC
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~t 188 (358)
..+.+.+.|- .|+| .| .|++||++.
T Consensus 1260 -----------------v~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1260 -----------------VHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred -----------------eeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 6677877653 4776 57 999999986
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00035 Score=71.50 Aligned_cols=85 Identities=15% Similarity=0.150 Sum_probs=54.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCc--cc---cc----------------c
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEE--KE---GK----------------A 159 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~g--l~---Gt----------------R 159 (358)
+.|.|-.|||+|.-|.|+|+||.|++|. |+|-.-.++.....++-+ ...++. +. |. |
T Consensus 105 ~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~Wk 183 (737)
T KOG1524|consen 105 AAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWR 183 (737)
T ss_pred hhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEe
Confidence 6788999999999999999999999997 565432222111111100 000000 00 11 1
Q ss_pred CCCc--eeeEEcCCCCEEEEe--c-ceEEEECC
Q psy2085 160 SSDE--SSEEEEEEEEEEESS--D-DDQAWTKE 187 (358)
Q Consensus 160 s~~P--~sI~fs~d~~~llSa--D-~IKIWD~~ 187 (358)
.... .++.|++.++.|+|+ | ..||||..
T Consensus 184 AHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~ 216 (737)
T KOG1524|consen 184 AHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ 216 (737)
T ss_pred ccCcEEEEeecCccccceeecCCceeEEeeccc
Confidence 1111 789999999999984 7 99999986
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.003 Score=62.64 Aligned_cols=123 Identities=15% Similarity=0.060 Sum_probs=80.5
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEE--EecCCeEEEEEcCCCceee-eeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLST--GIYKPRVRCYETDNLSMKF-ERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~Llat--G~~d~~IrvwDl~~lslk~-~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
+.+++..+.+|...+.+.|-.+..++..+ .+....+.||...+..... ..|. +-+..|+|+|
T Consensus 97 ~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhv---------------Sml~dVavS~ 161 (390)
T KOG3914|consen 97 GAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCEPILGHV---------------SMLLDVAVSP 161 (390)
T ss_pred cceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcchhhhhh---------------hhhheeeecC
Confidence 67889999998888888887777665543 1233345555544321110 0111 4578999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
+.+.|+|+..|+.|++=-.-.-..+.++- ||..-| ..|+.-++ ..|+| .| ++++||..
T Consensus 162 D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFV-----------------S~isl~~~-~~LlS~sGD~tlr~Wd~~ 223 (390)
T KOG3914|consen 162 DDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFV-----------------STISLTDN-YLLLSGSGDKTLRLWDIT 223 (390)
T ss_pred CCCEEEEecCCceEEEEecCcccchhhhccccHhhe-----------------eeeeeccC-ceeeecCCCCcEEEEecc
Confidence 99999999999999984432222333332 455444 45666554 45776 58 99999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+|+
T Consensus 224 sgk 226 (390)
T KOG3914|consen 224 SGK 226 (390)
T ss_pred cCC
Confidence 999
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00094 Score=65.36 Aligned_cols=147 Identities=16% Similarity=0.170 Sum_probs=96.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+++..+-++...+ +.+ .-|.|.-..-|-...|...+..+ -.|+-.+.|-++|++...
T Consensus 225 gyhfs~G~sqqv~L~nvetg---------------~~qsf~sksDVfAlQf~~s~nLv-~~GcRngeI~~iDLR~rn--- 285 (425)
T KOG2695|consen 225 GYHFSVGLSQQVLLTNVETG---------------HQQSFQSKSDVFALQFAGSDNLV-FNGCRNGEIFVIDLRCRN--- 285 (425)
T ss_pred eeeecccccceeEEEEeecc---------------cccccccchhHHHHHhcccCCee-EecccCCcEEEEEeeecc---
Confidence 4556666666666655 322 23455544556777888777655 467789999999997531
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
++ ..-....+..| +.|+++..-. ..+.|.+.+.+|+|++||.|.-++ |.+..+|.+.-+.
T Consensus 286 -qG---~~~~a~rlyh~--Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~---------- 349 (425)
T KOG2695|consen 286 -QG---NGWCAQRLYHD--SSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAY---------- 349 (425)
T ss_pred -cC---CCcceEEEEcC--cchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccc----------
Confidence 00 01111222233 5678877765 567777778899999999998777 8888888654211
Q ss_pred cCCCceeeEEcCCCCEEEE-e-c-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEES-S-D-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG~ 190 (358)
.-+..++....|+| . | -.+||.+++|.
T Consensus 350 -----l~~~v~~eeg~I~s~GdDcytRiWsl~~gh 379 (425)
T KOG2695|consen 350 -----LPAHVKEEEGSIFSVGDDCYTRIWSLDSGH 379 (425)
T ss_pred -----cccccccccceEEEccCeeEEEEEecccCc
Confidence 22344567778887 3 4 99999999997
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0078 Score=59.28 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=87.3
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEe---cCCeEEEEEcCCC--ceeeeeeccCceEEEEEeecCCCCCeeEEE
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGI---YKPRVRCYETDNL--SMKFERCFDSEVVTFEILSDDYSSELNSIA 108 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~---~d~~IrvwDl~~l--slk~~r~~d~e~v~f~~LS~D~s~~In~i~ 108 (358)
..+++++.+.-.....-+.++|++++|.++.. ..+.|..|.+... .++..... .+.. ..-..|+
T Consensus 25 g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~---------~~~g--~~p~~i~ 93 (345)
T PF10282_consen 25 GTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSV---------PSGG--SSPCHIA 93 (345)
T ss_dssp TEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEE---------EESS--SCEEEEE
T ss_pred CCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeee---------ccCC--CCcEEEE
Confidence 34677777665666788999999999988865 4689999998763 33321111 1111 3446789
Q ss_pred EcCCCCEEEEEe-CCCeEEEEeCCCCceeEEE-eC--CCCccccccCCCcccccc--CCCceeeEEcCCCCEEEEec---
Q psy2085 109 INPVHQLICVGT-IEGKVEAWDPRMKVKAGTL-DC--AFNCISNERDTEEKEGKA--SSDESSEEEEEEEEEEESSD--- 179 (358)
Q Consensus 109 ~np~~~llasGs-~DGtV~iWD~Rs~~~i~~L-~~--~~~~v~~~~~i~gl~GtR--s~~P~sI~fs~d~~~llSaD--- 179 (358)
++|++..|.++. .+|+|.++++.....+... .. +...- ..-.| .++|..+.|+|+|++|+.+|
T Consensus 94 ~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g--------~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~ 165 (345)
T PF10282_consen 94 VDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSG--------PNPDRQEGPHPHQVVFSPDGRFVYVPDLGA 165 (345)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEE--------SSTTTTSSTCEEEEEE-TTSSEEEEEETTT
T ss_pred EecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCC--------CcccccccccceeEEECCCCCEEEEEecCC
Confidence 999999877776 5999999999874333222 11 10000 00001 23348999999999999765
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
.|.+++.+.+.
T Consensus 166 D~v~~~~~~~~~ 177 (345)
T PF10282_consen 166 DRVYVYDIDDDT 177 (345)
T ss_dssp TEEEEEEE-TTS
T ss_pred CEEEEEEEeCCC
Confidence 88888886643
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0023 Score=61.49 Aligned_cols=69 Identities=14% Similarity=0.078 Sum_probs=47.5
Q ss_pred eEEEEcCC-CCEEEEEeCCCeEEEEeCC-CCceeEE-EeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--e
Q psy2085 105 NSIAINPV-HQLICVGTIEGKVEAWDPR-MKVKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--S 178 (358)
Q Consensus 105 n~i~~np~-~~llasGs~DGtV~iWD~R-s~~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--a 178 (358)
=...|+.. .+++.+||+||.+.+||+| .++.+-. ...|...| .+|.=+| .+..|++ .
T Consensus 169 Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV-----------------~SI~ss~~~~~~I~TGsY 231 (339)
T KOG0280|consen 169 WTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGV-----------------VSIYSSPPKPTYIATGSY 231 (339)
T ss_pred eeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecce-----------------EEEecCCCCCceEEEecc
Confidence 34455543 4699999999999999999 3444432 33455554 5566565 4567775 6
Q ss_pred c-ceEEEECCC-Cc
Q psy2085 179 D-DDQAWTKEI-KK 190 (358)
Q Consensus 179 D-~IKIWD~~t-G~ 190 (358)
| .|++||.++ |+
T Consensus 232 De~i~~~DtRnm~k 245 (339)
T KOG0280|consen 232 DECIRVLDTRNMGK 245 (339)
T ss_pred ccceeeeehhcccC
Confidence 8 999999985 44
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0032 Score=64.91 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=42.7
Q ss_pred EEEeecCCc-eeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEe----------cCCeEEEE
Q psy2085 6 CYQTNWHKQ-AVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGI----------YKPRVRCY 73 (358)
Q Consensus 6 ~~~~~~~~~-~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~----------~d~~Irvw 73 (358)
+|=+|-|++ +..|- ++-. .+|.|-||+ |.-|.|||+-+||++-+. .+.++.||
T Consensus 223 TYL~t~Hk~GI~lWGG~~f~--------------r~~RF~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IW 287 (698)
T KOG2314|consen 223 TYLVTFHKQGIALWGGESFD--------------RIQRFYHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIW 287 (698)
T ss_pred eEEEEEeccceeeecCccHH--------------HHHhccCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEE
Confidence 455666666 66665 4333 367788886 888999999999975431 22468999
Q ss_pred EcCCCcee
Q psy2085 74 ETDNLSMK 81 (358)
Q Consensus 74 Dl~~lslk 81 (358)
|+.++.++
T Consensus 288 DI~tG~lk 295 (698)
T KOG2314|consen 288 DIATGLLK 295 (698)
T ss_pred Eccccchh
Confidence 99876443
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0066 Score=60.45 Aligned_cols=125 Identities=15% Similarity=0.126 Sum_probs=83.4
Q ss_pred EEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCEEEEEe---------
Q psy2085 52 RISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQLICVGT--------- 120 (358)
Q Consensus 52 ~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~llasGs--------- 120 (358)
.|++ ||+++++|. .|+|.+-|+.....++..-. +.+.+...-++|. +++.-++++|+++.+....
T Consensus 200 ~~~~~dg~~~~vs~--eG~V~~id~~~~~~~~~~~~--~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk 275 (352)
T TIGR02658 200 AYSNKSGRLVWPTY--TGKIFQIDLSSGDAKFLPAI--EAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHK 275 (352)
T ss_pred ceEcCCCcEEEEec--CCeEEEEecCCCcceeccee--eeccccccccccCCCcceeEEEcCCCCEEEEEecCCcccccc
Confidence 5567 999998864 49999999765433221110 1111111112333 4556699999987655422
Q ss_pred -CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEEe---c-ceEEEECCCCcE---
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEESS---D-DDQAWTKEIKKT--- 191 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llSa---D-~IKIWD~~tG~~--- 191 (358)
..+.|-++|+.+++.+..+.....+ ..|+|+||++ +|+.+ + .|-|.|..+++.
T Consensus 276 ~~~~~V~ViD~~t~kvi~~i~vG~~~------------------~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~ 337 (352)
T TIGR02658 276 TASRFLFVVDAKTGKRLRKIELGHEI------------------DSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSS 337 (352)
T ss_pred CCCCEEEEEECCCCeEEEEEeCCCce------------------eeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEee
Confidence 1258999999999999999865544 6799999999 77753 3 899999999882
Q ss_pred E-ecCCCC
Q psy2085 192 Y-NLGPAP 198 (358)
Q Consensus 192 y-~lgpap 198 (358)
. .+|..|
T Consensus 338 i~~vg~~P 345 (352)
T TIGR02658 338 VNQLGRGP 345 (352)
T ss_pred eccCCCCC
Confidence 2 555555
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0013 Score=63.79 Aligned_cols=143 Identities=22% Similarity=0.241 Sum_probs=83.4
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc---eeeeeeccCceEEEEEe-ecCCCCCeeEEEEcCCCC--EEEE
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS---MKFERCFDSEVVTFEIL-SDDYSSELNSIAINPVHQ--LICV 118 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls---lk~~r~~d~e~v~f~~L-S~D~s~~In~i~~np~~~--llas 118 (358)
...|+.|.|-..|.|| |||.-.|+|-+|.-+..- .||.....+....|..| |-+-...||.|.|..+++ .+..
T Consensus 26 ad~ItaVefd~tg~Yl-atGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 26 ADKITAVEFDETGLYL-ATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred cceeeEEEeccccceE-eecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 3468899999999997 788777999999865432 22211111111112111 000015799999977654 3555
Q ss_pred EeCCCeEEEEeCCCCceeEEEeCC-CCccccc-----cCCCccc------------cc--c---CCCc---eeeEEcCCC
Q psy2085 119 GTIEGKVEAWDPRMKVKAGTLDCA-FNCISNE-----RDTEEKE------------GK--A---SSDE---SSEEEEEEE 172 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i~~L~~~-~~~v~~~-----~~i~gl~------------Gt--R---s~~P---~sI~fs~d~ 172 (358)
.+.|.+|++|-++.+..--+-... ...+... .+...+. .+ | ..+| ++|+|+.|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 588999999999877532111100 0000000 0000000 00 1 1223 899999999
Q ss_pred CEEEEec--ceEEEECCC
Q psy2085 173 EEEESSD--DDQAWTKEI 188 (358)
Q Consensus 173 ~~llSaD--~IKIWD~~t 188 (358)
..++|+| .|.+|++.-
T Consensus 185 et~lSaDdLrINLWnl~i 202 (460)
T COG5170 185 ETLLSADDLRINLWNLEI 202 (460)
T ss_pred heeeeccceeeeeccccc
Confidence 9999998 999999864
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0065 Score=68.62 Aligned_cols=138 Identities=10% Similarity=0.011 Sum_probs=81.5
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCceEEEEE-eecCCCCCeeEEEEcCCCC-EEEEEeCCCeE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSEVVTFEI-LSDDYSSELNSIAINPVHQ-LICVGTIEGKV 125 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e~v~f~~-LS~D~s~~In~i~~np~~~-llasGs~DGtV 125 (358)
..|+|+|++..|.++.+..++|++||..+.... +..........-.. ..... ...+.|+++|+++ ++++.+.++.|
T Consensus 686 ~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~-~~P~GIavspdG~~LYVADs~n~~I 764 (1057)
T PLN02919 686 WDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSF-AQPSGISLSPDLKELYIADSESSSI 764 (1057)
T ss_pred eEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccc-cCccEEEEeCCCCEEEEEECCCCeE
Confidence 579999966667777777899999998764322 11000000000000 00000 3457799999987 77787889999
Q ss_pred EEEeCCCCceeEEEeCCCCccc----cccC-CCccccc--cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCIS----NERD-TEEKEGK--ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~----~~~~-i~gl~Gt--Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++||+.++... .+.+ ..++. ..+. .+|. |+ ....|..|+|+++|...++ .+ .|++||..++.
T Consensus 765 rv~D~~tg~~~-~~~g-g~~~~~~~l~~fG~~dG~-g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~ 836 (1057)
T PLN02919 765 RALDLKTGGSR-LLAG-GDPTFSDNLFKFGDHDGV-GSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKR 836 (1057)
T ss_pred EEEECCCCcEE-EEEe-cccccCcccccccCCCCc-hhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCe
Confidence 99999887532 1111 11100 0000 0110 11 2345688999999986665 34 99999998876
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.013 Score=59.62 Aligned_cols=113 Identities=12% Similarity=0.004 Sum_probs=68.9
Q ss_pred CCEeEEEEcCCCCEEEEEEec---CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE-EeC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIY---KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV-GTI 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~---d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas-Gs~ 121 (358)
+.+..-+|||||+.+++..++ .+.|.++|+.+...+. + .. ..+.+.+.+|+|++..|+. .+.
T Consensus 188 ~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~--------l----t~--~~g~~~~~~~SPDG~~la~~~~~ 253 (419)
T PRK04043 188 GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEK--------I----AS--SQGMLVVSDVSKDGSKLLLTMAP 253 (419)
T ss_pred CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEE--------E----ec--CCCcEEeeEECCCCCEEEEEEcc
Confidence 345678999999963332222 4789999987643211 0 00 1133556789999975544 333
Q ss_pred C--CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 122 E--GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 122 D--GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
+ ..|.++|+.++.. ..|..+.... ..-.|+|||+.|+ ++| .|-+.|+.+|+
T Consensus 254 ~g~~~Iy~~dl~~g~~-~~LT~~~~~d-----------------~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~ 312 (419)
T PRK04043 254 KGQPDIYLYDTNTKTL-TQITNYPGID-----------------VNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGS 312 (419)
T ss_pred CCCcEEEEEECCCCcE-EEcccCCCcc-----------------CccEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 4 4566778877753 3343222111 3457999998776 443 78888988877
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.005 Score=65.76 Aligned_cols=116 Identities=16% Similarity=0.134 Sum_probs=69.6
Q ss_pred CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC----------------------------------
Q psy2085 56 DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS---------------------------------- 101 (358)
Q Consensus 56 DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s---------------------------------- 101 (358)
+|+|+ +||+.||+|-|.-+-+.........+. .+....++|||+
T Consensus 82 ~Gey~-asCS~DGkv~I~sl~~~~~~~~~df~r-piksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 82 EGEYV-ASCSDDGKVVIGSLFTDDEITQYDFKR-PIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred CCceE-EEecCCCcEEEeeccCCccceeEecCC-cceeEEeccchhhhhhhheeecCcceEEEehhhhhcCccceeeecC
Confidence 68887 678889988888776533221111111 122334445543
Q ss_pred -CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec
Q psy2085 102 -SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD 179 (358)
Q Consensus 102 -~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD 179 (358)
+.|.+|+|+ ++++|-++++| |+++|..+++.+..+.-+...+-.. .-|-.+.|.++.+.|+. +|
T Consensus 160 eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e-----------~fpphl~W~~~~~LVIGW~d 225 (846)
T KOG2066|consen 160 EGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPE-----------LFPPHLHWQDEDRLVIGWGD 225 (846)
T ss_pred ccceEEEEec--CcEEEEecCCC-cEEEeccccceeeccCCCCCCCCcc-----------cCCCceEecCCCeEEEecCC
Confidence 567777774 46777766655 6777777777776665433221000 01167999999998887 67
Q ss_pred ceEEEECC
Q psy2085 180 DDQAWTKE 187 (358)
Q Consensus 180 ~IKIWD~~ 187 (358)
+|+|-.++
T Consensus 226 ~v~i~~I~ 233 (846)
T KOG2066|consen 226 SVKICSIK 233 (846)
T ss_pred eEEEEEEe
Confidence 66666665
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00097 Score=65.26 Aligned_cols=92 Identities=14% Similarity=0.132 Sum_probs=71.4
Q ss_pred cceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCc-----eeeeeeccCceEEEEEeecCCCCCeeEE
Q psy2085 34 RRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLS-----MKFERCFDSEVVTFEILSDDYSSELNSI 107 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~ls-----lk~~r~~d~e~v~f~~LS~D~s~~In~i 107 (358)
..++..|-|-|+.+|+|++.-. ++++|+|++ -+++|++||++-.. +.++.| ||..
T Consensus 287 G~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~-M~gkikLyD~R~~K~~~~V~qYeGH------------------vN~~ 347 (425)
T KOG2695|consen 287 GNGWCAQRLYHDSSVTSLQILQFSQQKLMASD-MTGKIKLYDLRATKCKKSVMQYEGH------------------VNLS 347 (425)
T ss_pred CCCcceEEEEcCcchhhhhhhccccceEeecc-CcCceeEeeehhhhcccceeeeecc------------------cccc
Confidence 3478889999999999999888 899999886 58999999987421 122333 3433
Q ss_pred E-----EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 108 A-----INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 108 ~-----~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
+ ++|..+.++++|+|-..+||.++++..+.++.-+.+
T Consensus 348 a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~s 389 (425)
T KOG2695|consen 348 AYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPYS 389 (425)
T ss_pred cccccccccccceEEEccCeeEEEEEecccCceeeccCCCCc
Confidence 3 455667888899999999999999999888875544
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0038 Score=63.77 Aligned_cols=109 Identities=16% Similarity=0.249 Sum_probs=77.9
Q ss_pred CCCEeEEEEcCCCCEEE-EEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--
Q psy2085 45 PGVSTSVRISPDGQYVL-STGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-- 121 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~Ll-atG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-- 121 (358)
.+.|....|+|++...+ .+|-.+-.+.+||+... +.+. + |. ..=|.+.|||..+++.++|-
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~-----------~--Pe--~~rNT~~fsp~~r~il~agF~n 337 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY-----------F--PE--QKRNTIFFSPHERYILFAGFDN 337 (561)
T ss_pred cccceeeeecccCCceeEEecccccceeecccccc-eEEe-----------c--CC--cccccccccCcccEEEEecCCc
Confidence 35789999999886544 44555567899998753 2211 0 11 34588999999888777665
Q ss_pred -CCeEEEEeCCCCcee-EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--------ec-ceEEEECCC
Q psy2085 122 -EGKVEAWDPRMKVKA-GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--------SD-DDQAWTKEI 188 (358)
Q Consensus 122 -DGtV~iWD~Rs~~~i-~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--------aD-~IKIWD~~t 188 (358)
-|.|.+||+..+..+ +.+++... .-+.|+||++++.+ -| .|+|||+..
T Consensus 338 l~gni~i~~~~~rf~~~~~~~~~n~-------------------s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 338 LQGNIEIFDPAGRFKVAGAFNGLNT-------------------SYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred cccceEEeccCCceEEEEEeecCCc-------------------eEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 588999999887654 47776543 34789999998874 27 999999863
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00085 Score=70.99 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=91.6
Q ss_pred ccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC
Q psy2085 33 RRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV 112 (358)
Q Consensus 33 ~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~ 112 (358)
.++||+.- ..|..++..+.|.|...-++||++-+-.|++||+....- .+. .-.+|..+...|.||-.
T Consensus 103 ~~aIef~l-hghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~--------p~y----s~~~w~s~asqVkwnyk 169 (1081)
T KOG0309|consen 103 SNAIEFVL-HGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHR--------PFY----STSSWRSAASQVKWNYK 169 (1081)
T ss_pred ccceEEEE-ecCccceeccccCCCCCcceeeccccccceeeeccCCCc--------cee----eeecccccCceeeeccc
Confidence 36777653 357788999999999999999999999999999975321 111 11345577889999975
Q ss_pred C-CEEEEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC-CCEEEE--ec-ceEEEEC
Q psy2085 113 H-QLICVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE-EEEEES--SD-DDQAWTK 186 (358)
Q Consensus 113 ~-~llasGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d-~~~llS--aD-~IKIWD~ 186 (358)
. ..+|+ +-..-|.+||.|.+. ++..+.+|...+ ++|.|+.- ...+.+ .| +||.||-
T Consensus 170 ~p~vlas-shg~~i~vwd~r~gs~pl~s~K~~vs~v-----------------n~~~fnr~~~s~~~s~~~d~tvkfw~y 231 (1081)
T KOG0309|consen 170 DPNVLAS-SHGNDIFVWDLRKGSTPLCSLKGHVSSV-----------------NSIDFNRFKYSEIMSSSNDGTVKFWDY 231 (1081)
T ss_pred Ccchhhh-ccCCceEEEeccCCCcceEEecccceee-----------------ehHHHhhhhhhhhcccCCCCceeeecc
Confidence 4 45554 667789999999886 567888876655 66777642 223444 57 9999998
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
....
T Consensus 232 ~kSt 235 (1081)
T KOG0309|consen 232 SKST 235 (1081)
T ss_pred cccc
Confidence 7544
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0017 Score=65.52 Aligned_cols=171 Identities=17% Similarity=0.198 Sum_probs=101.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk 81 (358)
.|..|+|-|+-+.-|-.+- -.-||.+..|. |-+.+.+++.|-||. ++.|++. +..+|+||+.+..+.
T Consensus 21 ~fiiqASlDGh~KFWkKs~----------isGvEfVKhFraHL~~I~sl~~S~dg~-L~~Sv~d~Dhs~KvfDvEn~Dmi 89 (558)
T KOG0882|consen 21 KFIIQASLDGHKKFWKKSR----------ISGVEFVKHFRAHLGVILSLAVSYDGW-LFRSVEDPDHSVKVFDVENFDMI 89 (558)
T ss_pred heEEeeecchhhhhcCCCC----------ccceeehhhhHHHHHHHHhhhccccce-eEeeccCcccceeEEEeeccchh
Confidence 4666677666666664100 02356666664 667889999999995 5667555 889999999864321
Q ss_pred ----e------eeec--cCceEEEEEee------------------cC-----CCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 82 ----F------ERCF--DSEVVTFEILS------------------DD-----YSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 82 ----~------~r~~--d~e~v~f~~LS------------------~D-----~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
. .-.. ..........| ++ +..+|.++-++|.+..+.|+...|+|+
T Consensus 90 nmiKL~~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVE 169 (558)
T KOG0882|consen 90 NMIKLVDLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVE 169 (558)
T ss_pred hhcccccCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeE
Confidence 0 0000 00000000000 00 117899999999999999988899999
Q ss_pred EEeCCCCceeEEEeCCCCcccccc-CCCccccc--cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNER-DTEEKEGK--ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~-~i~gl~Gt--Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.|...- ........ +.... .-+-+.|+ ....|.++.|+|+|..+.+ -| .|++.+.++|+
T Consensus 170 yWs~e~--~~qfPr~~---l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGk 234 (558)
T KOG0882|consen 170 YWSAEG--PFQFPRTN---LNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGK 234 (558)
T ss_pred eecCCC--cccCcccc---ccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccch
Confidence 998652 11111110 00000 00001122 1223388999999999886 46 99999999998
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0097 Score=64.98 Aligned_cols=106 Identities=12% Similarity=0.060 Sum_probs=78.3
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
--+-+|++-=|+ ++|+--++|-+|+...- .+..| . ..|.+.|-.+.++-++.++|+.|+|.++++|
T Consensus 137 ~~~g~s~~~~~i-~~gsv~~~iivW~~~~d-n~p~~----------l--~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW 202 (967)
T KOG0974|consen 137 LIIGDSAEELYI-ASGSVFGEIIVWKPHED-NKPIR----------L--KGHEGSIFSIVTSLDGRYIASVSDDRSIRLW 202 (967)
T ss_pred EEEeccCcEEEE-EeccccccEEEEecccc-CCcce----------e--cccCCceEEEEEccCCcEEEEEecCcceeee
Confidence 345567777776 56777899999998732 11111 1 1122678899999999999999999999999
Q ss_pred eCCCCceeE-EEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 129 DPRMKVKAG-TLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 129 D~Rs~~~i~-~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
++.+++... +.-+|..-+ -++.|+|. .|+| -| +.++|+.+
T Consensus 203 ~i~s~~~~~~~~fgHsaRv-----------------w~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 203 PIDSREVLGCTGFGHSARV-----------------WACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred ecccccccCccccccccee-----------------EEEEeccc--eeEEeccceEEEEEecc
Confidence 999998765 445555443 67889998 6777 47 99999654
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.00096 Score=63.17 Aligned_cols=70 Identities=21% Similarity=0.339 Sum_probs=54.7
Q ss_pred CCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCce-eEEEeCCCCccccccCCCccccccCCCceeeEEcCC-CCEEEE-
Q psy2085 102 SELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVK-AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE-EEEEES- 177 (358)
Q Consensus 102 ~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~-i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d-~~~llS- 177 (358)
..|.+++-+|. .+++++|++||.|-+||.|.... +..|..|..++ ..|.|||. +..|++
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i-----------------~eV~FHpk~p~~Lft~ 242 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEI-----------------WEVHFHPKNPEHLFTC 242 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhh-----------------hheeccCCCchheeEe
Confidence 56999999996 56899999999999999998853 34455666665 77999985 456665
Q ss_pred -ec-ceEEEECCC
Q psy2085 178 -SD-DDQAWTKEI 188 (358)
Q Consensus 178 -aD-~IKIWD~~t 188 (358)
-| .+--||..+
T Consensus 243 sedGslw~wdas~ 255 (319)
T KOG4714|consen 243 SEDGSLWHWDAST 255 (319)
T ss_pred cCCCcEEEEcCCC
Confidence 36 999999874
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0025 Score=65.66 Aligned_cols=117 Identities=13% Similarity=0.046 Sum_probs=67.3
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.|.|.||++.+|-. |...+-...-.+--.+. |...|+.+-|-.|-++++++ |+-|++||.--..+- ..-
T Consensus 751 iSASkDKTVKLWSi------k~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc---D~giHlWDPFigr~L-aq~ 820 (1034)
T KOG4190|consen 751 ISASKDKTVKLWSI------KPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC---DGGIHLWDPFIGRLL-AQM 820 (1034)
T ss_pred eeccCCceEEEEEe------ccccCccccceeeeEhhhccCcccceeeeeccceeeec---cCcceeecccccchh-Hhh
Confidence 57899999999971 11111111112333333 67789999999999998543 678999995321110 000
Q ss_pred ccCceEEEEEeecCCCCCeeEEEE-cCCCCE-EEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAI-NPVHQL-ICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~-np~~~l-lasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
.++ |.+..+-|..++ |-+..+ +|-++...||+++|.|+..-...+...
T Consensus 821 ~da---------pk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVc 870 (1034)
T KOG4190|consen 821 EDA---------PKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVC 870 (1034)
T ss_pred hcC---------cccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEec
Confidence 011 111111122222 223334 444478999999999999877777643
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.001 Score=40.64 Aligned_cols=28 Identities=21% Similarity=0.578 Sum_probs=26.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEe
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWD 129 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD 129 (358)
..|+++.|+|.+.++++|+.||.|++||
T Consensus 13 ~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 13 GPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred CceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 5799999999999999999999999997
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00041 Score=54.07 Aligned_cols=68 Identities=19% Similarity=0.361 Sum_probs=59.0
Q ss_pred cceeecceeeeHHHHhhcCCCcccc-ccceeecccccccchHHHHHhhhccCChhhHHHH-HHHHHHHHHHHhhccccc
Q psy2085 217 ENVYDDYKFVTRQELEDLGLGHLIG-TSLLRAYMHGFFMDIRLYRKAKSVSAPFEFEEFK-KKKIRERIEQERTRGVQL 293 (358)
Q Consensus 217 ~~vyddy~fvt~~~l~~l~l~~lig-t~~l~~ymhg~fi~~~ly~~~~~~~~p~~~~~~r-~~~i~~~~~~~~~~ri~~ 293 (358)
.....+.+|++.+|+ ||++|--| +++|.|...--. ||.. .+|||.-..+| +++|+..|||..+..|++
T Consensus 9 ~~~v~~~~F~PfEDv--LgvGh~~G~sSiiVPGsGe~N-----fDs~--e~NP~et~kqRrE~EV~~LLeKippd~I~L 78 (80)
T PF08149_consen 9 GSPVESLRFCPFEDV--LGVGHSKGFSSIIVPGSGEPN-----FDSL--EANPFETKKQRREREVRSLLEKIPPDMITL 78 (80)
T ss_pred CCeeeeeEEechHHe--eEeeccCceeEEeccCCCCCC-----CCcc--cCCcccchhHHhHHHHHHHHHhCCccceec
Confidence 445677899999999 99999999 999999988776 5555 68999999998 889999999999998875
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins []. |
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.035 Score=51.53 Aligned_cols=112 Identities=11% Similarity=0.153 Sum_probs=75.2
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
+...+.+ .|.|+|+|||+.|+.+-+..++|..|++........ ....+.-+.... +....+++.+++++.+
T Consensus 129 ~~~~~~~---pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~-g~pDG~~vD~~G~l~v 199 (246)
T PF08450_consen 129 VADGLGF---PNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELS-----NRRVFIDFPGGP-GYPDGLAVDSDGNLWV 199 (246)
T ss_dssp EEEEESS---EEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEE-----EEEEEEE-SSSS-CEEEEEEEBTTS-EEE
T ss_pred EecCccc---ccceEECCcchheeecccccceeEEEecccccccee-----eeeeEEEcCCCC-cCCCcceEcCCCCEEE
Confidence 4444433 599999999999888888889999999864322110 000111111111 2367899999999999
Q ss_pred EEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 118 VGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 118 sGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
+....|.|.++|+. ++.+..+..+.... ++++|. ++.+.|+
T Consensus 200 a~~~~~~I~~~~p~-G~~~~~i~~p~~~~-----------------t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 200 ADWGGGRIVVFDPD-GKLLREIELPVPRP-----------------TNCAFGGPDGKTLY 241 (246)
T ss_dssp EEETTTEEEEEETT-SCEEEEEE-SSSSE-----------------EEEEEESTTSSEEE
T ss_pred EEcCCCEEEEECCC-ccEEEEEcCCCCCE-----------------EEEEEECCCCCEEE
Confidence 88889999999998 88888888763332 788994 5655554
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0068 Score=60.33 Aligned_cols=79 Identities=15% Similarity=0.210 Sum_probs=58.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGt 124 (358)
+.|+.+..+|-...+ ++.+.++.|-+||..+... +.-.| +-.+|.....++-|+|.. .||++.++.|-
T Consensus 150 ~~VY~m~~~P~DN~~-~~~t~~~~V~~~D~Rd~~~--------~~~~~--~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G 218 (609)
T KOG4227|consen 150 GDVYHMDQHPTDNTL-IVVTRAKLVSFIDNRDRQN--------PISLV--LPANSGKNFYTAEFHPETPALILVNSETGG 218 (609)
T ss_pred cceeecccCCCCceE-EEEecCceEEEEeccCCCC--------CCcee--eecCCCccceeeeecCCCceeEEeccccCC
Confidence 489999999986544 5667899999999975320 11112 223344567889999974 58999999999
Q ss_pred EEEEeCCCCce
Q psy2085 125 VEAWDPRMKVK 135 (358)
Q Consensus 125 V~iWD~Rs~~~ 135 (358)
+.+||.|....
T Consensus 219 ~~~~D~R~~~~ 229 (609)
T KOG4227|consen 219 PNVFDRRMQAR 229 (609)
T ss_pred CCceeeccccc
Confidence 99999997653
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.011 Score=62.50 Aligned_cols=106 Identities=18% Similarity=0.244 Sum_probs=73.2
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce-EEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
+++..+.-+.....|.+||||+|++++|.-+++|.|.|+..+..-|...++.+. +--.+.- + -+=...+|.+++..
T Consensus 312 ~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev-G--lGPLHTaFDg~G~a 388 (635)
T PRK02888 312 ALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL-G--LGPLHTAFDGRGNA 388 (635)
T ss_pred ceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc-C--CCcceEEECCCCCE
Confidence 466666677778899999999999999999999999999875422322222111 1111100 0 12356788899888
Q ss_pred EEEEeCCCeEEEEeCCC----------CceeEEEeCCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRM----------KVKAGTLDCAFNC 145 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs----------~~~i~~L~~~~~~ 145 (358)
..|-.-|..|-.||+.+ ...+..++.|.++
T Consensus 389 ytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~p 428 (635)
T PRK02888 389 YTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQP 428 (635)
T ss_pred EEeEeecceeEEEehHHHHHHhccccCCcceecccCCCcc
Confidence 88888899999999876 3445667776655
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0021 Score=65.23 Aligned_cols=114 Identities=16% Similarity=0.232 Sum_probs=83.1
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee----------------eeeeccCceEEEEEeecCCCCCeeE
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK----------------FERCFDSEVVTFEILSDDYSSELNS 106 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk----------------~~r~~d~e~v~f~~LS~D~s~~In~ 106 (358)
++|..|+|+++|.+|.-|+|+- .+-.|.+|. .++..- +..|..+ ..|..
T Consensus 334 d~~v~ITgl~Ysh~~sElLaSY-nDe~IYLF~-~~~~~G~~p~~~s~~~~~~k~vYKGHrN~-------------~TVKg 398 (559)
T KOG1334|consen 334 DDPVNITGLVYSHDGSELLASY-NDEDIYLFN-KSMGDGSEPDPSSPREQYVKRVYKGHRNS-------------RTVKG 398 (559)
T ss_pred cCcccceeEEecCCccceeeee-cccceEEec-cccccCCCCCCCcchhhccchhhcccccc-------------cccce
Confidence 5778899999998887777664 355788883 222110 1122222 22444
Q ss_pred EE-EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceE
Q psy2085 107 IA-INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQ 182 (358)
Q Consensus 107 i~-~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IK 182 (358)
+- |-|...++++||+=|.|=|||-.+++.|..+.+..+.| ++|.=||--..|+| .| -||
T Consensus 399 VNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VV-----------------NCLEpHP~~PvLAsSGid~DVK 461 (559)
T KOG1334|consen 399 VNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVV-----------------NCLEPHPHLPVLASSGIDHDVK 461 (559)
T ss_pred eeeccCccceEEecCccceEEEEecchhHHHHHhhcccceE-----------------eccCCCCCCchhhccCCcccee
Confidence 43 46888999999999999999999999998888776665 77888998888887 47 999
Q ss_pred EEECCC
Q psy2085 183 AWTKEI 188 (358)
Q Consensus 183 IWD~~t 188 (358)
||-..+
T Consensus 462 IWTP~~ 467 (559)
T KOG1334|consen 462 IWTPLT 467 (559)
T ss_pred eecCCc
Confidence 999854
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0067 Score=62.48 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=61.6
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEE--ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTG--IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG--~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
.|-.++.+|. ++.=|++-|+|.|++|+.+| --.|.|-|||+.+. |.....++ ..-..++|+|
T Consensus 301 lr~~~v~df~-egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~--K~i~~~~a-------------~~tt~~eW~P 364 (566)
T KOG2315|consen 301 LRGKPVFDFP-EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR--KLIAKFKA-------------ANTTVFEWSP 364 (566)
T ss_pred CCCCEeEeCC-CCCccceEECCCCCEEEEeecCCCCCceEEEeccch--hhcccccc-------------CCceEEEEcC
Confidence 3445554442 24568999999999988775 45689999999873 32222211 2346789999
Q ss_pred CCCEEEEEeC------CCeEEEEeCCCCceeE
Q psy2085 112 VHQLICVGTI------EGKVEAWDPRMKVKAG 137 (358)
Q Consensus 112 ~~~llasGs~------DGtV~iWD~Rs~~~i~ 137 (358)
+|+.|.|++. |.-++||+. +|..+.
T Consensus 365 dGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~ 395 (566)
T KOG2315|consen 365 DGEYFLTATTAPRLRVDNGIKIWHY-TGSLLH 395 (566)
T ss_pred CCcEEEEEeccccEEecCCeEEEEe-cCceee
Confidence 9999888876 788999997 666554
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.075 Score=53.03 Aligned_cols=84 Identities=11% Similarity=0.033 Sum_probs=60.7
Q ss_pred EcCCCCEEEEEEe---------cCCeEEEEEcCCCceeeeeeccCce-EEEEEeecCCCCCeeEEEEcCCCCEEEEEe-C
Q psy2085 53 ISPDGQYVLSTGI---------YKPRVRCYETDNLSMKFERCFDSEV-VTFEILSDDYSSELNSIAINPVHQLICVGT-I 121 (358)
Q Consensus 53 ~SpDG~~LlatG~---------~d~~IrvwDl~~lslk~~r~~d~e~-v~f~~LS~D~s~~In~i~~np~~~llasGs-~ 121 (358)
+||||+.|.++.+ .+..|.|||+.++... +.+.... -.+... ..-+.++++|++.+|.... +
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~--~~i~~p~~p~~~~~-----~~~~~~~ls~dgk~l~V~n~~ 125 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPI--ADIELPEGPRFLVG-----TYPWMTSLTPDNKTLLFYQFS 125 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEE--eEEccCCCchhhcc-----CccceEEECCCCCEEEEecCC
Confidence 9999999988887 6789999999986543 2221100 001100 2346789999999777665 4
Q ss_pred -CCeEEEEeCCCCceeEEEeCCC
Q psy2085 122 -EGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 122 -DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
+..|-+.|+.+++.+..+..+.
T Consensus 126 p~~~V~VvD~~~~kvv~ei~vp~ 148 (352)
T TIGR02658 126 PSPAVGVVDLEGKAFVRMMDVPD 148 (352)
T ss_pred CCCEEEEEECCCCcEEEEEeCCC
Confidence 7999999999999999998754
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.008 Score=63.91 Aligned_cols=142 Identities=19% Similarity=0.204 Sum_probs=91.5
Q ss_pred eccCcccCCCccccccee-EEEEeeCCC------------CEeEEEEcCCC---CEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 20 IIGGRYLLPTNDIRRRIE-LIQDFEMPG------------VSTSVRISPDG---QYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 20 ~~~~r~lk~d~~~~~rIe-liqdfe~~~------------~v~~v~~SpDG---~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
++...-...|..+..|.- +++|++-|. .+-.++|||.. .++++|. ...--||++...+
T Consensus 29 a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts--~qkaiiwnlA~ss---- 102 (1081)
T KOG0309|consen 29 AVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTS--NQKAIIWNLAKSS---- 102 (1081)
T ss_pred ceeeccccchhhhhhhcCeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecC--cchhhhhhhhcCC----
Confidence 444444556667777765 456665332 35677888853 4565554 3346688876432
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCC
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
...++|.. .+++.+|..+-|+|+|. .+|+++.|-.|.+||+|+-. ++.....-.+..
T Consensus 103 ----~~aIef~l--hghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~a--------------- 161 (1081)
T KOG0309|consen 103 ----SNAIEFVL--HGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAA--------------- 161 (1081)
T ss_pred ----ccceEEEE--ecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccC---------------
Confidence 12234433 23447899999999986 89999999999999999864 455444321111
Q ss_pred CceeeEEcCC-CCEEEEec--ceEEEECCCCc
Q psy2085 162 DESSEEEEEE-EEEEESSD--DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d-~~~llSaD--~IKIWD~~tG~ 190 (358)
..|+|+-. +..++|+. .|.|||.+-|.
T Consensus 162 --sqVkwnyk~p~vlasshg~~i~vwd~r~gs 191 (1081)
T KOG0309|consen 162 --SQVKWNYKDPNVLASSHGNDIFVWDLRKGS 191 (1081)
T ss_pred --ceeeecccCcchhhhccCCceEEEeccCCC
Confidence 56899864 44556665 99999998766
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.026 Score=62.93 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=80.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEe--c---CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGI--Y---KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~--~---d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
+.....+|+|-.||+|++++.- . -..||||+=+ +.+.. -+|.++ +--.+++|-|.|++||+
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~s----tSE~v~---------gLe~~l~WrPsG~lIA~ 273 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQS----TSEPVD---------GLEGALSWRPSGNLIAS 273 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEe----ccccCC---------CccCCccCCCCCCEEEE
Confidence 3345678999999999866543 2 2478999854 32211 122221 22368899999999998
Q ss_pred EeC---CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCcEE
Q psy2085 119 GTI---EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 119 Gs~---DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~~y 192 (358)
.-. ...|-+|. |.|-+-+.+.....+. ...+ ..|.|++|+..|+- .. .|.+|-..+..-|
T Consensus 274 ~q~~~~~~~VvFfE-rNGLrhgeF~l~~~~~--~~~v-----------~~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWY 338 (928)
T PF04762_consen 274 SQRLPDRHDVVFFE-RNGLRHGEFTLRFDPE--EEKV-----------IELAWNSDSEILAVWLEDRVQLWTRSNYHWY 338 (928)
T ss_pred EEEcCCCcEEEEEe-cCCcEeeeEecCCCCC--Ccee-----------eEEEECCCCCEEEEEecCCceEEEeeCCEEE
Confidence 754 45677777 6676666666543110 0011 78999999998874 44 9999999887744
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.027 Score=62.88 Aligned_cols=129 Identities=13% Similarity=0.133 Sum_probs=80.7
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC----EEEEEe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ----LICVGT 120 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~----llasGs 120 (358)
.|.|++++.+|-|+|+ ++|+..|++-|||++=..+... .-.|+. ..|+.+..+|..+ .+++|+
T Consensus 1195 hG~vTSi~idp~~~Wl-viGts~G~l~lWDLRF~~~i~s-----------w~~P~~-~~i~~v~~~~~~~~~S~~vs~~~ 1261 (1431)
T KOG1240|consen 1195 HGLVTSIVIDPWCNWL-VIGTSRGQLVLWDLRFRVPILS-----------WEHPAR-APIRHVWLCPTYPQESVSVSAGS 1261 (1431)
T ss_pred ccceeEEEecCCceEE-EEecCCceEEEEEeecCceeec-----------ccCccc-CCcceEEeeccCCCCceEEEecc
Confidence 4789999999999986 6899999999999873211111 011111 5678888877543 444555
Q ss_pred -CCCeEEEEeCCCCceeEEEeCCCC-ccccccCCCccccccCCCc-----eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDCAFN-CISNERDTEEKEGKASSDE-----SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~~~~-~v~~~~~i~gl~GtRs~~P-----~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+-|.+|++.+|.+-.++-.... +.-..+.+. .++.+| ....+...+..+++ +| .|+.||..+-.
T Consensus 1262 ~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps----~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1262 SSNNEVSTWNMETGLRQTVLWASDGAPILSYALPS----NDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred cCCCceeeeecccCcceEEEEcCCCCcchhhhccc----ccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence 588999999999988877765422 110001000 011222 33444445556665 57 99999997644
|
|
| >KOG2318|consensus | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.002 Score=66.53 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=27.3
Q ss_pred hccccCChhhhhccCCCCccccCCCccccC
Q psy2085 329 SANLLEDDRFSKLFENPDFQVIEPSSDQVR 358 (358)
Q Consensus 329 ~~~~l~d~rf~~~f~~~~f~id~~~~e~~~ 358 (358)
....|.||||++||+++.|+|||++..|++
T Consensus 560 e~~~l~D~RFsAlftsh~yaiDPt~p~FK~ 589 (650)
T KOG2318|consen 560 EEANLNDPRFSALFTSHAYAIDPTDPHFKG 589 (650)
T ss_pred cccccccHHHHHHhcccccccCCCCccccc
Confidence 355799999999999999999999999975
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.031 Score=53.56 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=68.3
Q ss_pred eEEEEee----CCCCEeEEEEcCCCCEEEEEEecCCe----------EEEEEcCCCceeeeeeccC--------------
Q psy2085 37 ELIQDFE----MPGVSTSVRISPDGQYVLSTGIYKPR----------VRCYETDNLSMKFERCFDS-------------- 88 (358)
Q Consensus 37 eliqdfe----~~~~v~~v~~SpDG~~LlatG~~d~~----------IrvwDl~~lslk~~r~~d~-------------- 88 (358)
...+.|. +|..|+++.+.|.++.|+++|....+ +-.|-+-+...-+......
T Consensus 135 ~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~ 214 (282)
T PF15492_consen 135 QENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLL 214 (282)
T ss_pred eeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccccccccccee
Confidence 3445555 47899999999999988888765443 4556654322111100000
Q ss_pred ceEEEEEeec--CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 89 EVVTFEILSD--DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 89 e~v~f~~LS~--D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
....+.+.+- ...++|-.+++||+|++||+.+.+|.|.+|++-+=...+....+.
T Consensus 215 ~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~e 271 (282)
T PF15492_consen 215 RIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQDE 271 (282)
T ss_pred eccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchhh
Confidence 0111112221 112789999999999999999999999999987766666555443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.29 Score=48.27 Aligned_cols=156 Identities=12% Similarity=0.090 Sum_probs=101.3
Q ss_pred eEEEEeecC----Cceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcC
Q psy2085 4 EYCYQTNWH----KQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIY--KPRVRCYETD 76 (358)
Q Consensus 4 ~~~~~~~~~----~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~ 76 (358)
++.|-+|+. +++-.|. .... ..+.++|.....+..+=++|+|++++|.+.... .+.|--|.+.
T Consensus 3 ~~~YiGtyT~~~s~gI~v~~ld~~~----------g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD 72 (346)
T COG2706 3 QTVYIGTYTKRESQGIYVFNLDTKT----------GELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRID 72 (346)
T ss_pred eEEEEeeecccCCCceEEEEEeCcc----------cccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEc
Confidence 345555554 5677777 3222 345566777777888999999999998777655 6788889887
Q ss_pred C--CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCC-Ccee---EEEeCCCCccccc
Q psy2085 77 N--LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-EGKVEAWDPRM-KVKA---GTLDCAFNCISNE 149 (358)
Q Consensus 77 ~--lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs-~~~i---~~L~~~~~~v~~~ 149 (358)
. ..+.+.-+. .+ +. .+-+.|+++++++++.++.- -|.|.+.-++. |... ..+. |......
T Consensus 73 ~~~G~Lt~ln~~--------~~-~g--~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~-h~g~~p~- 139 (346)
T COG2706 73 PDDGRLTFLNRQ--------TL-PG--SPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVK-HTGSGPH- 139 (346)
T ss_pred CCCCeEEEeecc--------cc-CC--CCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeee-cCCCCCC-
Confidence 5 333322111 11 11 23378999999998888875 68899887765 3322 2222 1111000
Q ss_pred cCCCccccccCCC--ceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 150 RDTEEKEGKASSD--ESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 150 ~~i~gl~GtRs~~--P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
-|... +....|.|++++|++.| .|.++++..|+
T Consensus 140 --------~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~ 178 (346)
T COG2706 140 --------ERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGK 178 (346)
T ss_pred --------ccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCc
Confidence 02222 27889999999999866 89999999888
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=58.53 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=58.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe--
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK-- 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt-- 124 (358)
.+..+++||.|.||++. ....|.||+-.... ++.+-.. ..|.-+.|+|.+.+|.|=+..+.
T Consensus 34 p~~~~~~SP~G~~l~~~--~~~~V~~~~g~~~~-~l~~~~~--------------~~V~~~~fSP~~kYL~tw~~~pi~~ 96 (561)
T COG5354 34 PVAYVSESPLGTYLFSE--HAAGVECWGGPSKA-KLVRFRH--------------PDVKYLDFSPNEKYLVTWSREPIIE 96 (561)
T ss_pred chhheeecCcchheehh--hccceEEccccchh-heeeeec--------------CCceecccCcccceeeeeccCCccC
Confidence 46789999999998653 35679999987654 3322211 34667778888888877655444
Q ss_pred -------------EEEEeCCCCceeEEEeCCCCc
Q psy2085 125 -------------VEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 125 -------------V~iWD~Rs~~~i~~L~~~~~~ 145 (358)
+.+||..++..+..+.+...+
T Consensus 97 pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~ 130 (561)
T COG5354 97 PEIEISPFTSKNNVFVWDIASGMIVFSFNGISQP 130 (561)
T ss_pred hhhccCCccccCceeEEeccCceeEeeccccCCc
Confidence 899999999988887765443
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.054 Score=53.28 Aligned_cols=72 Identities=18% Similarity=0.276 Sum_probs=55.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK-AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-- 178 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~-i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-- 178 (358)
+.|.+++|.|..++|.+|..|..|-+||+--+.- ...+.+|...+ ..+..-+--..++|+
T Consensus 198 ~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV-----------------~~l~~~~~t~~l~S~~e 260 (404)
T KOG1409|consen 198 GEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKV-----------------QALSYAQHTRQLISCGE 260 (404)
T ss_pred cceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhh-----------------hhhhhhhhheeeeeccC
Confidence 7899999999999999999999999999866553 45666776655 344454555678885
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
| .|-+||.+...
T Consensus 261 dg~i~~w~mn~~r 273 (404)
T KOG1409|consen 261 DGGIVVWNMNVKR 273 (404)
T ss_pred CCeEEEEecccee
Confidence 4 99999997543
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.11 Score=52.84 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=26.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCc
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLS 79 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~ls 79 (358)
+++......|||||+.|+.+.+. +++|.++|+....
T Consensus 231 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 231 SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 56667778999999988766433 3578888876543
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.0031 Score=67.63 Aligned_cols=72 Identities=10% Similarity=0.080 Sum_probs=63.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD 179 (358)
..|.|+.|...+..+++|++|..|+||.+.+..+++++.+|...+ +.++-+....++++ .|
T Consensus 191 naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~di-----------------tdlavs~~n~~iaaaS~D 253 (1113)
T KOG0644|consen 191 NAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDI-----------------TDLAVSSNNTMIAAASND 253 (1113)
T ss_pred hheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCcccc-----------------chhccchhhhhhhhcccC
Confidence 569999999999999999999999999999999999999998776 56777766666664 68
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
+|++|-+.+|.
T Consensus 254 ~vIrvWrl~~~~ 265 (1113)
T KOG0644|consen 254 KVIRVWRLPDGA 265 (1113)
T ss_pred ceEEEEecCCCc
Confidence 99999999887
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.068 Score=56.77 Aligned_cols=27 Identities=0% Similarity=-0.176 Sum_probs=22.6
Q ss_pred eeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
..|.++|||++++.+ + +|-|.|..+.+
T Consensus 324 HGV~vSPDGkylyVanklS~tVSVIDv~k~k 354 (635)
T PRK02888 324 HGVNTSPDGKYFIANGKLSPTVTVIDVRKLD 354 (635)
T ss_pred cceEECCCCCEEEEeCCCCCcEEEEEChhhh
Confidence 779999999999863 5 99999998744
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.014 Score=41.22 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
..|.+++|||...|||.|+.+|.|.++.+ ++++
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 46899999999999999999999999988 5544
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.021 Score=34.49 Aligned_cols=35 Identities=26% Similarity=0.563 Sum_probs=27.6
Q ss_pred EEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEE
Q psy2085 39 IQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYE 74 (358)
Q Consensus 39 iqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwD 74 (358)
+..+. +...++++.|+|+++++ ++|+.++.|++||
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~-~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYL-ASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEE-EEecCCCeEEEcC
Confidence 34443 56789999999999765 6677899999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.034 Score=59.63 Aligned_cols=108 Identities=16% Similarity=0.200 Sum_probs=77.2
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEEEEeecCCCCCeeEEEEcCC------------C
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTFEILSDDYSSELNSIAINPV------------H 113 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f~~LS~D~s~~In~i~~np~------------~ 113 (358)
-+.+.|+|.| |+|-|+. ..|-|-|..++.+. .+.| ...|+.|.|.|. +
T Consensus 18 ~~A~Dw~~~G--LiAygsh-slV~VVDs~s~q~iqsie~h---------------~s~V~~VrWap~~~p~~llS~~~~~ 79 (1062)
T KOG1912|consen 18 RNAADWSPSG--LIAYGSH-SLVSVVDSRSLQLIQSIELH---------------QSAVTSVRWAPAPSPRDLLSPSSSQ 79 (1062)
T ss_pred ccccccCccc--eEEEecC-ceEEEEehhhhhhhhccccC---------------ccceeEEEeccCCCchhccCccccc
Confidence 4678999999 5677764 47899998765321 1111 146888888753 2
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC---CCC-EEEE--ec-ceEEEEC
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE---EEE-EEES--SD-DDQAWTK 186 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~---d~~-~llS--aD-~IKIWD~ 186 (358)
-+||++.-.|.|-+||.+.+..+..|..+..++ ..+.|-+ +++ .|+. .- ++-+|+.
T Consensus 80 lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~-----------------qdl~W~~~rd~Srd~LlaIh~ss~lvLwnt 142 (1062)
T KOG1912|consen 80 LLIASADISGRIILVDFVLASVINWLSHSNDSV-----------------QDLCWVPARDDSRDVLLAIHGSSTLVLWNT 142 (1062)
T ss_pred eeEEeccccCcEEEEEehhhhhhhhhcCCCcch-----------------hheeeeeccCcchheeEEecCCcEEEEEEc
Confidence 268888889999999999999888888777766 5677754 443 3443 33 8999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.||+
T Consensus 143 dtG~ 146 (1062)
T KOG1912|consen 143 DTGE 146 (1062)
T ss_pred cCCc
Confidence 9998
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.023 Score=62.75 Aligned_cols=104 Identities=14% Similarity=0.106 Sum_probs=73.2
Q ss_pred CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 56 DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 56 DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
-+-+| +.|+..|.|-.+|+.+. ++. -|.+.+ + .++|.+++||.++.+++.|-.+|.|.+||+-.+..
T Consensus 98 ~~~~i-vi~Ts~ghvl~~d~~~n-L~~-~~~ne~-v---------~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~ 164 (1206)
T KOG2079|consen 98 VVVPI-VIGTSHGHVLLSDMTGN-LGP-LHQNER-V---------QGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKI 164 (1206)
T ss_pred eeeeE-EEEcCchhhhhhhhhcc-cch-hhcCCc-c---------CCcceeeEecCCCceeccccCCCcEEEEEccCCcc
Confidence 34444 66788899999998752 221 121111 1 17899999999999999999999999999999999
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEEC
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTK 186 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~ 186 (358)
+..++-+..+.+.. -.+.+..++..++++| .=++|..
T Consensus 165 l~~i~e~~ap~t~v--------------i~v~~t~~nS~llt~D~~Gsf~~l 202 (1206)
T KOG2079|consen 165 LKVITEHGAPVTGV--------------IFVGRTSQNSKLLTSDTGGSFWKL 202 (1206)
T ss_pred eeeeeecCCccceE--------------EEEEEeCCCcEEEEccCCCceEEE
Confidence 99888766654221 2334445566788888 5557765
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.052 Score=56.32 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=68.0
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-------
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI------- 121 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~------- 121 (358)
+-|+|||-|.||++ -..+-|.+|-=..... +.|-. ..+|.-|+|||.-.+|+|=|.
T Consensus 214 tyv~wSP~GTYL~t--~Hk~GI~lWGG~~f~r-~~RF~--------------Hp~Vq~idfSP~EkYLVT~s~~p~~~~~ 276 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVT--FHKQGIALWGGESFDR-IQRFY--------------HPGVQFIDFSPNEKYLVTYSPEPIIVEE 276 (698)
T ss_pred eeEEecCCceEEEE--EeccceeeecCccHHH-HHhcc--------------CCCceeeecCCccceEEEecCCccccCc
Confidence 67899999999854 3567799997443211 11111 045777888888887776542
Q ss_pred ----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--cceEEEEC
Q psy2085 122 ----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--DDDQAWTK 186 (358)
Q Consensus 122 ----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D~IKIWD~ 186 (358)
...+.|||++||.....+.+..++. ... -=..||.|+.+++.+ |+|.|++.
T Consensus 277 ~d~e~~~l~IWDI~tG~lkrsF~~~~~~~-~~W-------------P~frWS~DdKy~Arm~~~sisIyEt 333 (698)
T KOG2314|consen 277 DDNEGQQLIIWDIATGLLKRSFPVIKSPY-LKW-------------PIFRWSHDDKYFARMTGNSISIYET 333 (698)
T ss_pred ccCCCceEEEEEccccchhcceeccCCCc-ccc-------------ceEEeccCCceeEEeccceEEEEec
Confidence 3679999999998887776532211 000 115677777777742 36666655
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.13 Score=50.23 Aligned_cols=42 Identities=26% Similarity=0.352 Sum_probs=34.5
Q ss_pred CCeeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeEEEeCCC
Q psy2085 102 SELNSIAINPVHQLICVGT-IEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs-~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
+.|-+|++++++.++|+.| ..|.|-+||..++..+.....+.
T Consensus 217 ~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l~D 259 (305)
T PF07433_consen 217 GYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPLPD 259 (305)
T ss_pred CceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccccCc
Confidence 6799999999998775555 58999999999999887776543
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0075 Score=57.26 Aligned_cols=78 Identities=15% Similarity=0.233 Sum_probs=59.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV 125 (358)
+|.+++-.|..+.++++|+.+|.|-+||.++.++....-. -+...|+-|-|+|.. .-|.++++||.+
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~------------ahk~~i~eV~FHpk~p~~Lft~sedGsl 248 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLK------------AHKAEIWEVHFHPKNPEHLFTCSEDGSL 248 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHH------------HhhhhhhheeccCCCchheeEecCCCcE
Confidence 4889999999999999999999999999998754311000 011578999999964 478888999999
Q ss_pred EEEeCCCCceeE
Q psy2085 126 EAWDPRMKVKAG 137 (358)
Q Consensus 126 ~iWD~Rs~~~i~ 137 (358)
--||..+ ..++
T Consensus 249 w~wdas~-~~l~ 259 (319)
T KOG4714|consen 249 WHWDAST-TFLS 259 (319)
T ss_pred EEEcCCC-ceEE
Confidence 9999754 4443
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.23 Score=46.02 Aligned_cols=114 Identities=14% Similarity=0.144 Sum_probs=68.2
Q ss_pred eeCCCCEeEEEEc-CCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC-CCCCeeEEEEcCCCCEEEEE
Q psy2085 42 FEMPGVSTSVRIS-PDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD-YSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 42 fe~~~~v~~v~~S-pDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D-~s~~In~i~~np~~~llasG 119 (358)
+..++ ...+.+. ++|..++ +. ...+.++|+.+......-.. .... -....|.+++.|++.+.++.
T Consensus 37 ~~~~~-~~G~~~~~~~g~l~v-~~--~~~~~~~d~~~g~~~~~~~~---------~~~~~~~~~~ND~~vd~~G~ly~t~ 103 (246)
T PF08450_consen 37 IDLPG-PNGMAFDRPDGRLYV-AD--SGGIAVVDPDTGKVTVLADL---------PDGGVPFNRPNDVAVDPDGNLYVTD 103 (246)
T ss_dssp EESSS-EEEEEEECTTSEEEE-EE--TTCEEEEETTTTEEEEEEEE---------ETTCSCTEEEEEEEE-TTS-EEEEE
T ss_pred EecCC-CceEEEEccCCEEEE-EE--cCceEEEecCCCcEEEEeec---------cCCCcccCCCceEEEcCCCCEEEEe
Confidence 55555 6777777 7877554 33 34577779876533211110 0000 11468999999999988887
Q ss_pred eCC--------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECC
Q psy2085 120 TIE--------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKE 187 (358)
Q Consensus 120 s~D--------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~ 187 (358)
... |.|-.+++. ++....+..-..+ +.|+|+|+++.|+.+| .|..+|..
T Consensus 104 ~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~p------------------NGi~~s~dg~~lyv~ds~~~~i~~~~~~ 164 (246)
T PF08450_consen 104 SGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFP------------------NGIAFSPDGKTLYVADSFNGRIWRFDLD 164 (246)
T ss_dssp ECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSE------------------EEEEEETTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCccccccccceEEECCC-CeEEEEecCcccc------------------cceEECCcchheeecccccceeEEEecc
Confidence 654 668888887 5433333221111 7899999999887554 56666664
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.32 Score=49.99 Aligned_cols=117 Identities=13% Similarity=0.092 Sum_probs=64.0
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccC---ceEEEEEeecCCC----------------CCeeEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDS---EVVTFEILSDDYS----------------SELNSI 107 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~---e~v~f~~LS~D~s----------------~~In~i 107 (358)
...+.++|+|++++++| ++.--||......-+.. .+.+. ..-+|.++....+ .+.++=
T Consensus 35 p~~ls~npngr~v~V~g--~geY~iyt~~~~r~k~~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~ 112 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVCG--DGEYEIYTALAWRNKAFGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLPFSVE 112 (443)
T ss_dssp -SEEEE-TTSSEEEEEE--TTEEEEEETTTTEEEEEEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT-----SS-EE
T ss_pred CeeEEECCCCCEEEEEc--CCEEEEEEccCCcccccCceeEEEEecCccEEEEECCCeEEEEEcCccccceEEcCCcccc
Confidence 57899999999998754 67888888543322211 11000 0001222221111 111122
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-ceEEEE
Q psy2085 108 AINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-DDQAWT 185 (358)
Q Consensus 108 ~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-~IKIWD 185 (358)
.+-+ |.+|+..+.+ .|.+||..+++.++.++... + +.|.|+++|++|+ .++ ++-|++
T Consensus 113 ~If~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~--v-----------------k~V~Ws~~g~~val~t~~~i~il~ 171 (443)
T PF04053_consen 113 KIFG-GNLLGVKSSD-FICFYDWETGKLIRRIDVSA--V-----------------KYVIWSDDGELVALVTKDSIYILK 171 (443)
T ss_dssp EEE--SSSEEEEETT-EEEEE-TTT--EEEEESS-E--------------------EEEEE-TTSSEEEEE-S-SEEEEE
T ss_pred eEEc-CcEEEEECCC-CEEEEEhhHcceeeEEecCC--C-----------------cEEEEECCCCEEEEEeCCeEEEEE
Confidence 2222 6777776654 89999999999999998652 3 7899999999887 356 888877
Q ss_pred CC
Q psy2085 186 KE 187 (358)
Q Consensus 186 ~~ 187 (358)
.+
T Consensus 172 ~~ 173 (443)
T PF04053_consen 172 YN 173 (443)
T ss_dssp E-
T ss_pred ec
Confidence 54
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.026 Score=60.96 Aligned_cols=108 Identities=14% Similarity=0.119 Sum_probs=76.9
Q ss_pred CEeEEEEcCCCCEEEEEEec----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIY----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.++-+.|.|..-+++ .++. .|.|-||- .+.. ..|+...++ .+.++||+|.--+||.|=+-
T Consensus 17 vsti~SWHPsePlfA-VA~fS~er~GSVtIfa-dtGE--Pqr~Vt~P~------------hatSLCWHpe~~vLa~gwe~ 80 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFA-VASFSPERGGSVTIFA-DTGE--PQRDVTYPV------------HATSLCWHPEEFVLAQGWEM 80 (1416)
T ss_pred cccccccCCCCceeE-EEEecCCCCceEEEEe-cCCC--CCcccccce------------ehhhhccChHHHHHhhcccc
Confidence 445568999887654 3333 35677773 2221 234433222 36789999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
|.+.+|...+.+.-.....|..++ .-+.|||+|+.|+|+| .|.+|..+
T Consensus 81 g~~~v~~~~~~e~htv~~th~a~i-----------------~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 81 GVSDVQKTNTTETHTVVETHPAPI-----------------QGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ceeEEEecCCceeeeeccCCCCCc-----------------eeEEecCCCCeEEEcCCCceeEEEEee
Confidence 999999987776544444454444 6799999999999999 99999775
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.18 Score=51.62 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=68.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC--
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG-- 123 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG-- 123 (358)
+.|.+++.||||+++++ +....+|-+.|+.+...+..-. ++- +-|..++|||++..||-|--+|
T Consensus 402 g~I~av~vs~dGK~~vv-aNdr~el~vididngnv~~idk--S~~-----------~lItdf~~~~nsr~iAYafP~gy~ 467 (668)
T COG4946 402 GNIEAVKVSPDGKKVVV-ANDRFELWVIDIDNGNVRLIDK--SEY-----------GLITDFDWHPNSRWIAYAFPEGYY 467 (668)
T ss_pred cceEEEEEcCCCcEEEE-EcCceEEEEEEecCCCeeEecc--ccc-----------ceeEEEEEcCCceeEEEecCccee
Confidence 56889999999999865 5567788888998765432100 111 4588899999999999887665
Q ss_pred --eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 124 --KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 124 --tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
.|+++|+..++....-. +. +.+ .+=+|.|++++|.
T Consensus 468 tq~Iklydm~~~Kiy~vTT-~t---a~D--------------fsPaFD~d~ryLY 504 (668)
T COG4946 468 TQSIKLYDMDGGKIYDVTT-PT---AYD--------------FSPAFDPDGRYLY 504 (668)
T ss_pred eeeEEEEecCCCeEEEecC-Cc---ccc--------------cCcccCCCCcEEE
Confidence 58999998887543222 11 111 2347888888775
|
|
| >COG5638 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.011 Score=59.10 Aligned_cols=28 Identities=21% Similarity=0.356 Sum_probs=25.7
Q ss_pred cccCChhhhhccCCCCccccCCCccccC
Q psy2085 331 NLLEDDRFSKLFENPDFQVIEPSSDQVR 358 (358)
Q Consensus 331 ~~l~d~rf~~~f~~~~f~id~~~~e~~~ 358 (358)
.-+.||||+++|+|.+|+||++..||++
T Consensus 538 ~D~~DpRF~aifedhnFaiDPT~PefK~ 565 (622)
T COG5638 538 FDPKDPRFVAIFEDHNFAIDPTHPEFKK 565 (622)
T ss_pred cCCCCcchhhhcccCccccCCCCccccc
Confidence 4578999999999999999999999975
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.013 Score=60.54 Aligned_cols=72 Identities=14% Similarity=0.088 Sum_probs=54.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-------eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKV-------KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~-------~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
..|..|+--.+.+-+++++.|+||++|.++..- |.-+...|..++ ++|.|..+.+.
T Consensus 736 ~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i-----------------~~igfL~~lr~ 798 (1034)
T KOG4190|consen 736 EKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPI-----------------HDIGFLADLRS 798 (1034)
T ss_pred HHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcc-----------------cceeeeeccce
Confidence 445555554556678999999999999987531 223334455454 88999999999
Q ss_pred EEEec-ceEEEECCCCc
Q psy2085 175 EESSD-DDQAWTKEIKK 190 (358)
Q Consensus 175 llSaD-~IKIWD~~tG~ 190 (358)
|+|+| .|.+||.--|+
T Consensus 799 i~ScD~giHlWDPFigr 815 (1034)
T KOG4190|consen 799 IASCDGGIHLWDPFIGR 815 (1034)
T ss_pred eeeccCcceeecccccc
Confidence 99999 99999997766
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.073 Score=58.04 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=53.1
Q ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-----
Q psy2085 103 ELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES----- 177 (358)
Q Consensus 103 ~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS----- 177 (358)
+|.-+.. ++..+.+|...|+|-+-|+++-+.++++++|.+.+ ..|+-.|++|+|
T Consensus 179 ~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~si-------------------SDfDv~GNlLitCG~S~ 237 (1118)
T KOG1275|consen 179 GVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSI-------------------SDFDVQGNLLITCGYSM 237 (1118)
T ss_pred ceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccce-------------------eeeeccCCeEEEeeccc
Confidence 4444443 45789999999999999999999999999998776 345555666664
Q ss_pred ------ec-ceEEEECCCCc
Q psy2085 178 ------SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 ------aD-~IKIWD~~tG~ 190 (358)
+| -|||||++.-+
T Consensus 238 R~~~l~~D~FvkVYDLRmmr 257 (1118)
T KOG1275|consen 238 RRYNLAMDPFVKVYDLRMMR 257 (1118)
T ss_pred ccccccccchhhhhhhhhhh
Confidence 58 99999999765
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.09 Score=55.27 Aligned_cols=80 Identities=18% Similarity=0.231 Sum_probs=60.5
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCee-EEEEcCCCCEEEEEeCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELN-SIAINPVHQLICVGTIE 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In-~i~~np~~~llasGs~D 122 (358)
.|-.+..+.|+|--. |+|+++.+|.|-|+.++- .| +.++.+ |+ ..+. +++|.|+|++||.|-.|
T Consensus 19 l~~~i~~~ewnP~~d-LiA~~t~~gelli~R~n~-----qR-----lwtip~--p~--~~v~~sL~W~~DGkllaVg~kd 83 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMD-LIATRTEKGELLIHRLNW-----QR-----LWTIPI--PG--ENVTASLCWRPDGKLLAVGFKD 83 (665)
T ss_pred cccceEEEEEcCccc-hhheeccCCcEEEEEecc-----ce-----eEeccC--CC--CccceeeeecCCCCEEEEEecC
Confidence 456688999999776 568999999888888762 11 111111 22 2344 99999999999999999
Q ss_pred CeEEEEeCCCCceeEE
Q psy2085 123 GKVEAWDPRMKVKAGT 138 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~ 138 (358)
|+|++-|..++..+..
T Consensus 84 G~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 84 GTIRLHDVEKGGRLVS 99 (665)
T ss_pred CeEEEEEccCCCceec
Confidence 9999999999987765
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.067 Score=37.73 Aligned_cols=39 Identities=13% Similarity=0.278 Sum_probs=32.8
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
+++.+...+..|.+++|+|... |+|.|+.+|+|.||.++
T Consensus 3 ~~~~~k~l~~~v~~~~w~P~md-LiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 3 RQLGEKNLPSRVSCMSWCPTMD-LIALGTEDGEVLVYRLN 41 (47)
T ss_pred ceecccCCCCcEEEEEECCCCC-EEEEEECCCeEEEEECC
Confidence 4556666778899999999998 55889999999999984
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.28 Score=52.24 Aligned_cols=110 Identities=13% Similarity=0.124 Sum_probs=67.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+|..=+++-+.+.......+..++...+. -.+.+..+.+|++. |++|.|+..++|-||-++. .++..
T Consensus 46 ~~l~~GsS~G~lyl~~R~~~~~~~~~~~~-----------~~~~~~~~~vs~~e-~lvAagt~~g~V~v~ql~~-~~p~~ 112 (726)
T KOG3621|consen 46 EYLAMGSSAGSVYLYNRHTGEMRKLKNEG-----------ATGITCVRSVSSVE-YLVAAGTASGRVSVFQLNK-ELPRD 112 (726)
T ss_pred ceEEEecccceEEEEecCchhhhcccccC-----------ccceEEEEEecchh-HhhhhhcCCceEEeehhhc-cCCCc
Confidence 45555555555555554333333333222 11233445566665 5678888999999999876 32210
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
.+.+..+...+...|+|++|++++-.+.+|..-|+|.+--+.+
T Consensus 113 ------~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 113 ------LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ------ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 1111111111235799999999999999999999999987776
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.75 Score=45.06 Aligned_cols=90 Identities=16% Similarity=0.263 Sum_probs=60.5
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC-eE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG-KV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG-tV 125 (358)
..|.|+|||||+.+..+=+...+|.-|++..-.. ..+.. ..+..... ..+.-..+++-.+|.+.+++..+| .|
T Consensus 164 ~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g----~~~~~-~~~~~~~~-~~G~PDG~~vDadG~lw~~a~~~g~~v 237 (307)
T COG3386 164 IPNGLAFSPDGKTLYVADTPANRIHRYDLDPATG----PIGGR-RGFVDFDE-EPGLPDGMAVDADGNLWVAAVWGGGRV 237 (307)
T ss_pred ecCceEECCCCCEEEEEeCCCCeEEEEecCcccC----ccCCc-ceEEEccC-CCCCCCceEEeCCCCEEEecccCCceE
Confidence 3489999999998888877778888888863111 01111 11111111 013345677888899887666665 99
Q ss_pred EEEeCCCCceeEEEeCCC
Q psy2085 126 EAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~ 143 (358)
.+|++. ++.+..+..+.
T Consensus 238 ~~~~pd-G~l~~~i~lP~ 254 (307)
T COG3386 238 VRFNPD-GKLLGEIKLPV 254 (307)
T ss_pred EEECCC-CcEEEEEECCC
Confidence 999998 99999988774
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.29 Score=52.43 Aligned_cols=155 Identities=10% Similarity=0.125 Sum_probs=95.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee-eeeccC-ceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF-ERCFDS-EVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~-~r~~d~-e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
...+|+.|.....|| |+|+.+|.++|--+.+.+--. .+++.+ .++..--.-++|.+.|..+.||.+.+-|.|...+|
T Consensus 15 vkL~c~~WNke~gyI-AcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~G 93 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYI-ACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSG 93 (1189)
T ss_pred ceEEEEEEcccCCeE-EeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCc
Confidence 346899999999898 567789999999887532110 111110 01101001134558899999999999999999999
Q ss_pred eEEEEeCCCCceeEEE-eC-CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ce--------EEEECCC-C
Q psy2085 124 KVEAWDPRMKVKAGTL-DC-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DD--------QAWTKEI-K 189 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L-~~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~I--------KIWD~~t-G 189 (358)
.|-+|-+-.++-...+ +. ..+.+ .+++|+.+|++|.- .| .| +||..+- |
T Consensus 94 lIiVWmlykgsW~EEMiNnRnKSvV-----------------~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg 156 (1189)
T KOG2041|consen 94 LIIVWMLYKGSWCEEMINNRNKSVV-----------------VSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG 156 (1189)
T ss_pred eEEEEeeecccHHHHHhhCcCccEE-----------------EEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch
Confidence 9999998777654322 22 12223 67889988887753 45 44 4454321 1
Q ss_pred cEEecCCCCCccccccchhHHhhhccccceeec
Q psy2085 190 KTYNLGPAPKWCGFLDNLTEELEENIIENVYDD 222 (358)
Q Consensus 190 ~~y~lgpap~Wcsfldnlteele~~~~~~vydd 222 (358)
.+-..-.|..=++-+.-.|+.+ ..-+||+
T Consensus 157 ---~~l~hv~ws~D~~~~Lf~~ang-e~hlydn 185 (1189)
T KOG2041|consen 157 ---QLLAHVLWSEDLEQALFKKANG-ETHLYDN 185 (1189)
T ss_pred ---heccceeecccHHHHHhhhcCC-cEEEecc
Confidence 1212334666555555566653 3456765
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=94.64 E-value=1.4 Score=39.79 Aligned_cols=114 Identities=15% Similarity=0.143 Sum_probs=66.2
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
++|..+.+..+..|+...+ +++..++.++.+...-...++..+++ +.+++|..+|+.+....+..
T Consensus 38 ~v~~~~~~~~l~~~d~~tG-------------~~~W~~~~~~~~~~~~~~~~~~v~v~--~~~~~l~~~d~~tG~~~W~~ 102 (238)
T PF13360_consen 38 RVYVASGDGNLYALDAKTG-------------KVLWRFDLPGPISGAPVVDGGRVYVG--TSDGSLYALDAKTGKVLWSI 102 (238)
T ss_dssp EEEEEETTSEEEEEETTTS-------------EEEEEEECSSCGGSGEEEETTEEEEE--ETTSEEEEEETTTSCEEEEE
T ss_pred EEEEEcCCCEEEEEECCCC-------------CEEEEeeccccccceeeecccccccc--cceeeeEecccCCcceeeee
Confidence 4566667777777774333 24444544443333234445543333 35679999998887776652
Q ss_pred -eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 85 -CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 85 -~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
....+.. ...........+..++.++.+|.|.++|+++|+.+-......
T Consensus 103 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 103 YLTSSPPA----------GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EE-SSCTC----------STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred cccccccc----------ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 2111110 111111222227788888889999999999999987776533
|
... |
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.34 Score=47.88 Aligned_cols=107 Identities=15% Similarity=0.073 Sum_probs=59.5
Q ss_pred cCCCCEEEEEE--------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 54 SPDGQYVLSTG--------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 54 SpDG~~LlatG--------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
||||++++... +..+.+-|||+.+...+..... ...+....|||+++.+|... ++-|
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~--------------~~~~~~~~~sP~g~~~~~v~-~~nl 65 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP--------------PPKLQDAKWSPDGKYIAFVR-DNNL 65 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E--------------ETTBSEEEE-SSSTEEEEEE-TTEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC--------------ccccccceeecCCCeeEEEe-cCce
Confidence 79999987732 2345688999987543211000 14678899999999999865 5789
Q ss_pred EEEeCCCCceeEEEeC-CCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE
Q psy2085 126 EAWDPRMKVKAGTLDC-AFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~-~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS 177 (358)
-+++..++... .|.. ....+.... .+-+. .---.....+-|||||++|+.
T Consensus 66 y~~~~~~~~~~-~lT~dg~~~i~nG~-~dwvyeEEv~~~~~~~~WSpd~~~la~ 117 (353)
T PF00930_consen 66 YLRDLATGQET-QLTTDGEPGIYNGV-PDWVYEEEVFDRRSAVWWSPDSKYLAF 117 (353)
T ss_dssp EEESSTTSEEE-ESES--TTTEEESB---HHHHHHTSSSSBSEEE-TTSSEEEE
T ss_pred EEEECCCCCeE-EeccccceeEEcCc-cceeccccccccccceEECCCCCEEEE
Confidence 99998877443 2221 111110000 00000 000001167889999998884
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.28 Score=48.40 Aligned_cols=31 Identities=13% Similarity=0.392 Sum_probs=27.5
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
.+|.++.+-..-++|+|+|.|..|+|||+|+
T Consensus 365 tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 365 TGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cceeEEEhhhhccceeecCCceEEEEEechh
Confidence 6788888888888999999999999999875
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=94.31 E-value=1.9 Score=48.39 Aligned_cols=138 Identities=14% Similarity=0.122 Sum_probs=84.3
Q ss_pred eeEEEEeeCC------CCEeEEEEcCCCCEEEEEEecCCeEEEE----EcCCCceeeeeeccCceEEEEEeecCCCCCee
Q psy2085 36 IELIQDFEMP------GVSTSVRISPDGQYVLSTGIYKPRVRCY----ETDNLSMKFERCFDSEVVTFEILSDDYSSELN 105 (358)
Q Consensus 36 Ieliqdfe~~------~~v~~v~~SpDG~~LlatG~~d~~Irvw----Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In 105 (358)
++.+-+|+-+ +.|-++.+-+|..-|+ .+...|.|-++ +..+.. .|+|-.+ | .+|.
T Consensus 60 ~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~-~~~~~Gdi~~~~~~~~~~~~~--------~E~VG~v----d--~GI~ 124 (928)
T PF04762_consen 60 VEVLASWDAPLPDDPNDKIVSFQYLADSESLC-IALASGDIILVREDPDPDEDE--------IEIVGSV----D--SGIL 124 (928)
T ss_pred eeEEEeccccCCcCCCCcEEEEEeccCCCcEE-EEECCceEEEEEccCCCCCce--------eEEEEEE----c--CcEE
Confidence 3566666532 5688888888887654 34457778877 443321 1222211 1 6899
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCc------ccccc--CCCccccc------c---CC-------
Q psy2085 106 SIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNC------ISNER--DTEEKEGK------A---SS------- 161 (358)
Q Consensus 106 ~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~------v~~~~--~i~gl~Gt------R---s~------- 161 (358)
|++|||++.+||..+.+|+|-+-+ ++-.++.....+... ++... .-+...|+ | .+
T Consensus 125 a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~ 203 (928)
T PF04762_consen 125 AASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDE 203 (928)
T ss_pred EEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCcccc
Confidence 999999999999999999998864 555556554433221 11110 00111122 1 00
Q ss_pred -------CceeeEEcCCCCEEEE--e-----c--ceEEEECCCCc
Q psy2085 162 -------DESSEEEEEEEEEEES--S-----D--DDQAWTKEIKK 190 (358)
Q Consensus 162 -------~P~sI~fs~d~~~llS--a-----D--~IKIWD~~tG~ 190 (358)
....|+|-.||.+++. . . .||||+.+ |.
T Consensus 204 ~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~ 247 (928)
T PF04762_consen 204 GKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE 247 (928)
T ss_pred CccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce
Confidence 0167899999999872 2 2 89999987 76
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.31 Score=56.84 Aligned_cols=146 Identities=13% Similarity=0.103 Sum_probs=94.4
Q ss_pred eeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEE
Q psy2085 16 VTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFE 94 (358)
Q Consensus 16 ~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~ 94 (358)
..|. +-..+.+|+..+ .|.|+.-.|-..|- .||+.|+.|++|.+... ..++.+.
T Consensus 2193 ~tq~~~~~~~~~k~~v~---------------~v~r~~sHp~~~~Y-ltgs~dgsv~~~~w~~~---------~~v~~~r 2247 (2439)
T KOG1064|consen 2193 STQTSRGASVMIKHPVE---------------NVRRMTSHPSDPYY-LTGSQDGSVRMFEWGHG---------QQVVCFR 2247 (2439)
T ss_pred cceecccceeEeecccC---------------ceeeecCCCCCceE-EecCCCceEEEEeccCC---------CeEEEee
Confidence 4454 555566666654 35556666666654 47888999999998743 2244444
Q ss_pred EeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCccc-----------------
Q psy2085 95 ILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKE----------------- 156 (358)
Q Consensus 95 ~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~----------------- 156 (358)
.+.+ ..|..+.||-+|+-++.+..||.+.+|... .++.-.-.+|.-..+. .|--+++.
T Consensus 2248 t~g~---s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl 2323 (2439)
T KOG1064|consen 2248 TAGN---SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTL 2323 (2439)
T ss_pred ccCc---chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcccchhcc
Confidence 4433 578999999999999999999999999975 4445445555432210 01001110
Q ss_pred --cccCC----Cc---eeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 157 --GKASS----DE---SSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 157 --GtRs~----~P---~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+.++- ++ +.+++-|..+.|+|. + -|+|||++..+
T Consensus 2324 ~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq 2369 (2439)
T KOG1064|consen 2324 LPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ 2369 (2439)
T ss_pred cCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHH
Confidence 11111 11 889999999999985 4 99999998654
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.061 Score=58.55 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=63.9
Q ss_pred eEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccCce------E--EEEEeecCCC-----
Q psy2085 37 ELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDSEV------V--TFEILSDDYS----- 101 (358)
Q Consensus 37 eliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~e~------v--~f~~LS~D~s----- 101 (358)
.-+..| ++...-+|++||.+.++| +.|+..|+|++|++...++.-. -++.+.+ + .....|..|+
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL-~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Plsa 1170 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHL-AVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSA 1170 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceE-EeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHH
Confidence 334444 355678999999999988 5688999999999987654210 1111111 0 0112222222
Q ss_pred --------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Q psy2085 102 --------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL 139 (358)
Q Consensus 102 --------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L 139 (358)
.+-.++.|+...+.-+.|+.-..+.++|+.++.++.++
T Consensus 1171 LW~~~s~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty 1222 (1516)
T KOG1832|consen 1171 LWDASSTGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY 1222 (1516)
T ss_pred HhccccccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHh
Confidence 44567777766555556666677888999998877663
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.16 Score=53.42 Aligned_cols=72 Identities=15% Similarity=0.039 Sum_probs=59.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD 179 (358)
..|--+.|||.-.+||+++++|.|-+.-.. -+++.++..|.-.++ .+++|.|||+.|+- .|
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~----------------~sL~W~~DGkllaVg~kd 83 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVT----------------ASLCWRPDGKLLAVGFKD 83 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccc----------------eeeeecCCCCEEEEEecC
Confidence 357788999999999999999998887665 566777775555442 37999999998874 78
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
+|+|-|..+|.
T Consensus 84 G~I~L~Dve~~~ 95 (665)
T KOG4640|consen 84 GTIRLHDVEKGG 95 (665)
T ss_pred CeEEEEEccCCC
Confidence 99999999987
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.68 Score=50.48 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=61.4
Q ss_pred cccceeEEEEee-CCCC-EeEEEEcCCCCEEEEEEecCC----eEEEEEcCCCc----eeeeeeccCceEEEEEeecCCC
Q psy2085 32 IRRRIELIQDFE-MPGV-STSVRISPDGQYVLSTGIYKP----RVRCYETDNLS----MKFERCFDSEVVTFEILSDDYS 101 (358)
Q Consensus 32 ~~~rIeliqdfe-~~~~-v~~v~~SpDG~~LlatG~~d~----~IrvwDl~~ls----lk~~r~~d~e~v~f~~LS~D~s 101 (358)
+.++..++++|. ++.. +..+....+..+|++.|.... .|+|||++... ..|.+. ..-+....|.-.
T Consensus 50 Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP~c~~~----~ri~~~~np~~~ 125 (933)
T KOG2114|consen 50 LNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSPQCLYE----HRIFTIKNPTNP 125 (933)
T ss_pred ecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCcceeee----eeeeccCCCCCC
Confidence 456677888886 5655 555555555567877775443 79999997531 111110 001111223233
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEe
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWD 129 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD 129 (358)
.++.+++++.+-.++|+|-.||.|-+.-
T Consensus 126 ~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 126 SPASSLAVSEDLKTIVCGFTNGLVICYK 153 (933)
T ss_pred CcceEEEEEccccEEEEEecCcEEEEEc
Confidence 6789999999999999999999999983
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.1 Score=55.68 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee---------------EEEeCCCCccccccCCCccccccCCCceee
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA---------------GTLDCAFNCISNERDTEEKEGKASSDESSE 166 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i---------------~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI 166 (358)
...+|++||...+++|+||.||.+++--+.+...- .+|++|..++ .-+
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV-----------------~vv 77 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASV-----------------MVV 77 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceE-----------------EEE
Confidence 45799999999999999999999999877654432 2333444333 668
Q ss_pred EEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 167 EEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 167 ~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
.|+.+.++|.|+| .|.+|=+-.|.
T Consensus 78 TWNe~~QKLTtSDt~GlIiVWmlykgs 104 (1189)
T KOG2041|consen 78 TWNENNQKLTTSDTSGLIIVWMLYKGS 104 (1189)
T ss_pred EeccccccccccCCCceEEEEeeeccc
Confidence 9999999999987 89999987775
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.16 Score=54.73 Aligned_cols=38 Identities=11% Similarity=0.206 Sum_probs=27.6
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
..+.+-...+++|++++. ++ ++-|+..|.|++++.+..
T Consensus 32 ~~~~~~~~D~is~~av~~--~~-~~~GtH~g~v~~~~~~~~ 69 (846)
T KOG2066|consen 32 LVKNFLQNDAISCCAVHD--KF-FALGTHRGAVYLTTCQGN 69 (846)
T ss_pred ccHHHHhhhHHHHHHhhc--ce-eeeccccceEEEEecCCc
Confidence 444444566788888873 44 478999999999998753
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=93.91 E-value=1.2 Score=43.20 Aligned_cols=124 Identities=15% Similarity=0.146 Sum_probs=69.3
Q ss_pred cccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eeeeeeccCceEEEEEeecCCCCCeeEEE
Q psy2085 30 NDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKFERCFDSEVVTFEILSDDYSSELNSIA 108 (358)
Q Consensus 30 ~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~~r~~d~e~v~f~~LS~D~s~~In~i~ 108 (358)
+.-..+++++...+++++|++|+-- +|. |+++. .+.|.+|++.... +.. .+.+... ..|.++.
T Consensus 73 ~~~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~--g~~l~v~~l~~~~~l~~----------~~~~~~~--~~i~sl~ 136 (321)
T PF03178_consen 73 PENNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV--GNKLYVYDLDNSKTLLK----------KAFYDSP--FYITSLS 136 (321)
T ss_dssp -----EEEEEEEEEESS-EEEEEEE-TTE-EEEEE--TTEEEEEEEETTSSEEE----------EEEE-BS--SSEEEEE
T ss_pred cccceEEEEEEEEeecCcceEhhhh-CCE-EEEee--cCEEEEEEccCcccchh----------hheecce--EEEEEEe
Confidence 4445799999999999999999877 454 54432 4789999998755 221 1111110 1344444
Q ss_pred EcCCCCEEEEEeCCCeEEEE--eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEE
Q psy2085 109 INPVHQLICVGTIEGKVEAW--DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQA 183 (358)
Q Consensus 109 ~np~~~llasGs~DGtV~iW--D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKI 183 (358)
. .+++++.|..-..|.++ |.. ...+..+.....+.. + .++.|-++++.++.+| .+.+
T Consensus 137 ~--~~~~I~vgD~~~sv~~~~~~~~-~~~l~~va~d~~~~~----v-----------~~~~~l~d~~~~i~~D~~gnl~~ 198 (321)
T PF03178_consen 137 V--FKNYILVGDAMKSVSLLRYDEE-NNKLILVARDYQPRW----V-----------TAAEFLVDEDTIIVGDKDGNLFV 198 (321)
T ss_dssp E--ETTEEEEEESSSSEEEEEEETT-TE-EEEEEEESS-BE----E-----------EEEEEE-SSSEEEEEETTSEEEE
T ss_pred c--cccEEEEEEcccCEEEEEEEcc-CCEEEEEEecCCCcc----E-----------EEEEEecCCcEEEEEcCCCeEEE
Confidence 4 45688898887777766 542 222333322111110 0 6788886666777776 6666
Q ss_pred EECC
Q psy2085 184 WTKE 187 (358)
Q Consensus 184 WD~~ 187 (358)
+...
T Consensus 199 l~~~ 202 (321)
T PF03178_consen 199 LRYN 202 (321)
T ss_dssp EEE-
T ss_pred EEEC
Confidence 6554
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.19 Score=34.88 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=27.3
Q ss_pred CCeeEEEEcCCCC---EEEEEeCCCeEEEEeCCCC
Q psy2085 102 SELNSIAINPVHQ---LICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 102 ~~In~i~~np~~~---llasGs~DGtV~iWD~Rs~ 133 (358)
+.|.+|.|+|... ||+..-.-|.|.++|+|+.
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 4689999998654 9999888899999999963
|
It contains a characteristic DLL sequence motif. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=93.68 E-value=0.26 Score=52.42 Aligned_cols=123 Identities=16% Similarity=0.160 Sum_probs=81.9
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
..++|.--||..|.=-+++-.++|| +-|+.-|.+.+|.-....+ |-...+. -++.+.++++|++..+
T Consensus 24 ~~~~~~~~~~~~v~lTc~dst~~~l-~~GsS~G~lyl~~R~~~~~---~~~~~~~---------~~~~~~~~~vs~~e~l 90 (726)
T KOG3621|consen 24 PALLQPGFFPARVKLTCVDATEEYL-AMGSSAGSVYLYNRHTGEM---RKLKNEG---------ATGITCVRSVSSVEYL 90 (726)
T ss_pred hhhhccccCcceEEEEEeecCCceE-EEecccceEEEEecCchhh---hcccccC---------ccceEEEEEecchhHh
Confidence 3556665677777777788889998 5677789999998654322 1111111 0145677889999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeE-EE--eC---CCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEEC
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAG-TL--DC---AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTK 186 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~-~L--~~---~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~ 186 (358)
+|.|+..|.|.++-+..+.+-. .+ .+ |...| +.|.|++++.+|+|.| +|-.-.+
T Consensus 91 vAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rV-----------------Tal~Ws~~~~k~ysGD~~Gkv~~~~L 153 (726)
T KOG3621|consen 91 VAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRV-----------------TALEWSKNGMKLYSGDSQGKVVLTEL 153 (726)
T ss_pred hhhhcCCceEEeehhhccCCCcceeeccccccCCceE-----------------EEEEecccccEEeecCCCceEEEEEe
Confidence 9999999999999877643311 11 11 11122 7899999999999877 5555554
Q ss_pred CC
Q psy2085 187 EI 188 (358)
Q Consensus 187 ~t 188 (358)
++
T Consensus 154 ~s 155 (726)
T KOG3621|consen 154 DS 155 (726)
T ss_pred ch
Confidence 44
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.22 Score=46.61 Aligned_cols=71 Identities=18% Similarity=0.142 Sum_probs=44.7
Q ss_pred EEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC
Q psy2085 62 STGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC 141 (358)
Q Consensus 62 atG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~ 141 (358)
+.|+.++.|.+|.++.....+.+ +.+.. . ...+.|..-.++.+.++|+.||.|+.|.+.-.+.++....
T Consensus 74 ~vG~~dg~v~~~n~n~~g~~~d~------~~s~~--e---~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~ 142 (238)
T KOG2444|consen 74 MVGTSDGAVYVFNWNLEGAHSDR------VCSGE--E---SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQ 142 (238)
T ss_pred EeecccceEEEecCCccchHHHh------hhccc--c---cceeccccccccceeEEeccCCceeeeccccCceeeeecc
Confidence 56788999999999843221111 11000 0 1122233334566899999999999999988877777665
Q ss_pred CC
Q psy2085 142 AF 143 (358)
Q Consensus 142 ~~ 143 (358)
|.
T Consensus 143 h~ 144 (238)
T KOG2444|consen 143 HN 144 (238)
T ss_pred cc
Confidence 54
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=93.59 E-value=1.2 Score=50.33 Aligned_cols=129 Identities=10% Similarity=0.080 Sum_probs=77.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..|.++.|-.|+.-|+. ++..|.|.+-|..++.+..-...+ .+|-+++|||+.+++|..+.++++
T Consensus 69 ~~i~s~~fl~d~~~i~v-~~~~G~iilvd~et~~~eivg~vd--------------~GI~aaswS~Dee~l~liT~~~tl 133 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICV-ITALGDIILVDPETLELEIVGNVD--------------NGISAASWSPDEELLALITGRQTL 133 (1265)
T ss_pred cceEEEEEecccceEEE-EecCCcEEEEcccccceeeeeecc--------------CceEEEeecCCCcEEEEEeCCcEE
Confidence 46788888888876543 345677888887765432211111 689999999999999999988888
Q ss_pred EE----EeCCCCceeE-EEeCCCCcccccc--CCCccccc------c--------------CCCceeeEEcCCCCEEEE-
Q psy2085 126 EA----WDPRMKVKAG-TLDCAFNCISNER--DTEEKEGK------A--------------SSDESSEEEEEEEEEEES- 177 (358)
Q Consensus 126 ~i----WD~Rs~~~i~-~L~~~~~~v~~~~--~i~gl~Gt------R--------------s~~P~sI~fs~d~~~llS- 177 (358)
-+ |+|=.-+++. ....-...++..+ .-+.+.|+ | .++..+|.|-.||++++.
T Consensus 134 l~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs 213 (1265)
T KOG1920|consen 134 LFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVS 213 (1265)
T ss_pred EEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEE
Confidence 76 4443333330 0000001111110 01111122 0 001167999999998873
Q ss_pred -----ec--ceEEEECCCCc
Q psy2085 178 -----SD--DDQAWTKEIKK 190 (358)
Q Consensus 178 -----aD--~IKIWD~~tG~ 190 (358)
.| .|+|||.+ |.
T Consensus 214 ~~~~~~~~RkirV~drE-g~ 232 (1265)
T KOG1920|consen 214 FVESETGTRKIRVYDRE-GA 232 (1265)
T ss_pred EEeccCCceeEEEeccc-ch
Confidence 35 99999998 55
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.21 Score=34.67 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=25.5
Q ss_pred CCEeEEEEcCCCC--EEEEEEecCCeEEEEEcCC
Q psy2085 46 GVSTSVRISPDGQ--YVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 46 ~~v~~v~~SpDG~--~LlatG~~d~~IrvwDl~~ 77 (358)
+++.+++|||+.- -|++....-+.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 5799999998543 3556667789999999985
|
It contains a characteristic DLL sequence motif. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=93.45 E-value=1.3 Score=49.89 Aligned_cols=86 Identities=15% Similarity=0.063 Sum_probs=49.0
Q ss_pred eeEEEEcCCCCEEEEE-----eCCCeEEEEeCCCCce------eEEEeC-----CCC-cccc--c---------cCCCcc
Q psy2085 104 LNSIAINPVHQLICVG-----TIEGKVEAWDPRMKVK------AGTLDC-----AFN-CISN--E---------RDTEEK 155 (358)
Q Consensus 104 In~i~~np~~~llasG-----s~DGtV~iWD~Rs~~~------i~~L~~-----~~~-~v~~--~---------~~i~gl 155 (358)
=.+|+|--+|+++|+. +.-..|++||-. +.. ..-+.. +.+ -+++ + |+.+|+
T Consensus 198 ~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL 276 (1265)
T KOG1920|consen 198 KTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGL 276 (1265)
T ss_pred CceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCc
Confidence 3568999999999883 333899999965 321 111100 000 0000 0 122222
Q ss_pred c-cc-cCCCc------eeeEEcCCCCEEEE--ec----ceEEEECCCCc
Q psy2085 156 E-GK-ASSDE------SSEEEEEEEEEEES--SD----DDQAWTKEIKK 190 (358)
Q Consensus 156 ~-Gt-Rs~~P------~sI~fs~d~~~llS--aD----~IKIWD~~tG~ 190 (358)
. |. +-+.| ..|+|+.++..|+. ++ .|++|-..+-.
T Consensus 277 ~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 277 RHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred cccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 2 22 11233 78999999998874 33 69999987655
|
|
| >PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []) | Back alignment and domain information |
|---|
Probab=93.39 E-value=0.41 Score=42.64 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=26.1
Q ss_pred CCeeEEEEcCCC------CEEEEEeCCCeEEEEeCCC
Q psy2085 102 SELNSIAINPVH------QLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 102 ~~In~i~~np~~------~llasGs~DGtV~iWD~Rs 132 (358)
..|..++|||.| -+||+-+.+|.|.+|-...
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 379999999943 2899999999999998764
|
The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 []. |
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=93.35 E-value=2.6 Score=45.24 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=79.2
Q ss_pred cceeEEEEeeCCCCE---eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGVS---TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~v---~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
++++.+..+++.+.+ ..|+-|.-++.. ...+...++.|||+....+.++...+. .+.|..++|.
T Consensus 15 ~~~~w~~t~~~~T~i~~~~li~gss~~k~a-~V~~~~~~LtIWD~~~~~lE~~~~f~~------------~~~I~dLDWt 81 (631)
T PF12234_consen 15 NKIEWLLTSTFETGISNPSLISGSSIKKIA-VVDSSRSELTIWDTRSGVLEYEESFSE------------DDPIRDLDWT 81 (631)
T ss_pred CeEEEEEEEEEecCCCCcceEeecccCcEE-EEECCCCEEEEEEcCCcEEEEeeeecC------------CCceeeceee
Confidence 567878888776544 455666666643 344446689999998765544433211 1568888884
Q ss_pred --CCCCEEEEEeCCCeEEEEeC-C----CC----ceeEEEeCC---CCccccccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 111 --PVHQLICVGTIEGKVEAWDP-R----MK----VKAGTLDCA---FNCISNERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 111 --p~~~llasGs~DGtV~iWD~-R----s~----~~i~~L~~~---~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
|+++.+.+-|-.+.|.++-- | .. .++..++.. .++| .+..|.++|..|+
T Consensus 82 st~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~I-----------------gds~Wl~~G~LvV 144 (631)
T PF12234_consen 82 STPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPI-----------------GDSIWLKDGTLVV 144 (631)
T ss_pred ecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCc-----------------cceeEecCCeEEE
Confidence 67777666677788888743 1 11 123333321 1222 6689999999999
Q ss_pred Eec-ceEEEECC
Q psy2085 177 SSD-DDQAWTKE 187 (358)
Q Consensus 177 SaD-~IKIWD~~ 187 (358)
.++ .+.|.|..
T Consensus 145 ~sGNqlfv~dk~ 156 (631)
T PF12234_consen 145 GSGNQLFVFDKW 156 (631)
T ss_pred EeCCEEEEECCC
Confidence 888 88888764
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=93.21 E-value=0.12 Score=55.60 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=32.3
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
.+|..|..+.-|++||..-.|.-+++||+++-.++.
T Consensus 522 spI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr 557 (1062)
T KOG1912|consen 522 SPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLR 557 (1062)
T ss_pred CcceeeeecccCceEEEEecccchHHHhhccchHHH
Confidence 689999999999999999999999999998876643
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.17 Score=55.28 Aligned_cols=95 Identities=23% Similarity=0.446 Sum_probs=59.3
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCCCEEEEEE--------ecCCeEEEEEcCCCcee----------eeeeccCceEEEEE
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDGQYVLSTG--------IYKPRVRCYETDNLSMK----------FERCFDSEVVTFEI 95 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG~~LlatG--------~~d~~IrvwDl~~lslk----------~~r~~d~e~v~f~~ 95 (358)
..+.++.|. |.+.+..+.+ .|..|+++| .-||-|+|||++.+..- |.|-+..-....++
T Consensus 206 s~~~iht~~aHs~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V 283 (1118)
T KOG1275|consen 206 SFETIHTFDAHSGSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAV 283 (1118)
T ss_pred cCceeeeeeccccceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEE
Confidence 456788886 7777776555 577776665 23566999999865311 11111000000111
Q ss_pred eecC----------CC-------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 96 LSDD----------YS-------------SELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 96 LS~D----------~s-------------~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
.|.. ++ +.|.+.++++.++.+|.|..+|.|.+|-.+
T Consensus 284 ~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~~ 342 (1118)
T KOG1275|consen 284 TSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWADR 342 (1118)
T ss_pred EecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecCC
Confidence 1110 11 569999999999999999999999999744
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=93.03 E-value=1.2 Score=40.22 Aligned_cols=94 Identities=11% Similarity=-0.014 Sum_probs=58.0
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
+++|.+||..+....+....... . ....+. ..+.++.+.+++.++.|.+||+.+|+.+-.........
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~----------~-~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~ 69 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPG----------I-GGPVAT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPIS 69 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSS----------C-SSEEET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGG
T ss_pred CCEEEEEECCCCCEEEEEECCCC----------C-CCccce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccccc
Confidence 57899999987766555443110 0 111111 22345566666899999999999999988777633221
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEE-Eec-ceEEEECCCCc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-DDQAWTKEIKK 190 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-~IKIWD~~tG~ 190 (358)
... ...++..++ +.| .|..+|..+|+
T Consensus 70 -----------------~~~-~~~~~~v~v~~~~~~l~~~d~~tG~ 97 (238)
T PF13360_consen 70 -----------------GAP-VVDGGRVYVGTSDGSLYALDAKTGK 97 (238)
T ss_dssp -----------------SGE-EEETTEEEEEETTSEEEEEETTTSC
T ss_pred -----------------cee-eecccccccccceeeeEecccCCcc
Confidence 111 222333333 457 89999999998
|
... |
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=92.89 E-value=1.5 Score=42.31 Aligned_cols=88 Identities=10% Similarity=0.083 Sum_probs=61.1
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC--EEEEEeCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ--LICVGTIE 122 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~--llasGs~D 122 (358)
....-+..||.... .+|+++-|+.+.|||++.+.... .+. ..--|++.+.|..|.|+|-|. ||...--=
T Consensus 203 ~D~gF~~S~s~~~~-~FAv~~Qdg~~~I~DVR~~~tpm-----~~~---sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhf 273 (344)
T KOG4532|consen 203 SDHGFYNSFSENDL-QFAVVFQDGTCAIYDVRNMATPM-----AEI---SSTRPHHNGAFRVCRFSLYGLLDLLFISEHF 273 (344)
T ss_pred CCCceeeeeccCcc-eEEEEecCCcEEEEEecccccch-----hhh---cccCCCCCCceEEEEecCCCcceEEEEecCc
Confidence 34567889998775 46889999999999998753211 110 011245558999999998664 34433335
Q ss_pred CeEEEEeCCCCceeEEEeC
Q psy2085 123 GKVEAWDPRMKVKAGTLDC 141 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~ 141 (358)
+.+.+-|+|+......+-.
T Consensus 274 s~~hv~D~R~~~~~q~I~i 292 (344)
T KOG4532|consen 274 SRVHVVDTRNYVNHQVIVI 292 (344)
T ss_pred ceEEEEEcccCceeeEEec
Confidence 8899999999987766653
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=92.56 E-value=4.5 Score=40.22 Aligned_cols=79 Identities=15% Similarity=0.149 Sum_probs=42.4
Q ss_pred CCeeEEEEcCCCCEEEEE---eC-----CCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCC
Q psy2085 102 SELNSIAINPVHQLICVG---TI-----EGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE 171 (358)
Q Consensus 102 ~~In~i~~np~~~llasG---s~-----DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d 171 (358)
++-..+++|+..+.|-.- +. |+- |=++|+.++++++.+..... + .+|+.+.+
T Consensus 238 GG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~-~-----------------~Si~Vsqd 299 (342)
T PF06433_consen 238 GGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHP-I-----------------DSIAVSQD 299 (342)
T ss_dssp -SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEE-E-----------------SEEEEESS
T ss_pred cceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCc-c-----------------ceEEEccC
Confidence 555666776654422211 11 233 33447777777777765322 2 67888887
Q ss_pred CC-EEEE--e-c-ceEEEECCCCcE---E-ecCCCC
Q psy2085 172 EE-EEES--S-D-DDQAWTKEIKKT---Y-NLGPAP 198 (358)
Q Consensus 172 ~~-~llS--a-D-~IKIWD~~tG~~---y-~lgpap 198 (358)
.. +|++ . + .+.|||..+|+- - .||..|
T Consensus 300 ~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG~~~ 335 (342)
T PF06433_consen 300 DKPLLYALSAGDGTLDVYDAATGKLVRSIEQLGETP 335 (342)
T ss_dssp SS-EEEEEETTTTEEEEEETTT--EEEEE---SSS-
T ss_pred CCcEEEEEcCCCCeEEEEeCcCCcEEeehhccCCCc
Confidence 65 5654 2 4 899999999982 2 666665
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=92.45 E-value=1.7 Score=42.79 Aligned_cols=100 Identities=15% Similarity=0.070 Sum_probs=61.5
Q ss_pred CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy2085 57 GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 57 G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i 136 (358)
|..|++ ++.++.|.++|..+....+.......+. . +... ++..+..|+.+|.|..+|+.+|+.+
T Consensus 65 ~~~v~v-~~~~g~v~a~d~~tG~~~W~~~~~~~~~----------~---~p~v--~~~~v~v~~~~g~l~ald~~tG~~~ 128 (377)
T TIGR03300 65 GGKVYA-ADADGTVVALDAETGKRLWRVDLDERLS----------G---GVGA--DGGLVFVGTEKGEVIALDAEDGKEL 128 (377)
T ss_pred CCEEEE-ECCCCeEEEEEccCCcEeeeecCCCCcc----------c---ceEE--cCCEEEEEcCCCEEEEEECCCCcEe
Confidence 445654 4567899999998877666544432210 1 1112 3567778899999999999999987
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
-......... ...... ++..++. .| .+..||.++|+
T Consensus 129 W~~~~~~~~~-----------------~~p~v~-~~~v~v~~~~g~l~a~d~~tG~ 166 (377)
T TIGR03300 129 WRAKLSSEVL-----------------SPPLVA-NGLVVVRTNDGRLTALDAATGE 166 (377)
T ss_pred eeeccCceee-----------------cCCEEE-CCEEEEECCCCeEEEEEcCCCc
Confidence 6554332211 001111 2333333 56 88999998888
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=92.21 E-value=3.2 Score=40.85 Aligned_cols=73 Identities=15% Similarity=0.084 Sum_probs=48.1
Q ss_pred CCCEEEEEEecCCeEEEEEcCCCceeeee-eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 56 DGQYVLSTGIYKPRVRCYETDNLSMKFER-CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 56 DG~~LlatG~~d~~IrvwDl~~lslk~~r-~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
++.+|++ ++.++.|.++|..+....++. .... ..+.+..+ .+..|.+++.+|.|.+||+.+++
T Consensus 278 ~~~~vyv-~~~~G~l~~~d~~tG~~~W~~~~~~~-------------~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~ 341 (377)
T TIGR03300 278 DDNRLYV-TDADGVVVALDRRSGSELWKNDELKY-------------RQLTAPAV--VGGYLVVGDFEGYLHWLSREDGS 341 (377)
T ss_pred eCCEEEE-ECCCCeEEEEECCCCcEEEccccccC-------------CccccCEE--ECCEEEEEeCCCEEEEEECCCCC
Confidence 4555654 356889999999876554432 1110 01111112 35688889999999999999999
Q ss_pred eeEEEeCCCC
Q psy2085 135 KAGTLDCAFN 144 (358)
Q Consensus 135 ~i~~L~~~~~ 144 (358)
.+..+..+..
T Consensus 342 ~~~~~~~~~~ 351 (377)
T TIGR03300 342 FVARLKTDGS 351 (377)
T ss_pred EEEEEEcCCC
Confidence 9988876543
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=91.95 E-value=2.4 Score=46.62 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=73.4
Q ss_pred eeEEEEeeCCCCEeEEEEcCCC--------CEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC--CCee
Q psy2085 36 IELIQDFEMPGVSTSVRISPDG--------QYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--SELN 105 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG--------~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--~~In 105 (358)
=++++.+.+..-+.-+.|.|+. +.+ .|-.+..+-.||.+-..-|. |.. -+.+|+ ....
T Consensus 514 GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tf--lGls~n~lfriDpR~~~~k~--------v~~--~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 514 GKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTF--LGLSDNSLFRIDPRLSGNKL--------VDS--QSKQYSSKNNFS 581 (794)
T ss_pred CcEEEEeecCCCcceeEecccccccccCCCceE--EEECCCceEEeccCCCCCce--------eec--cccccccCCCce
Confidence 3566777665544344555542 222 25567789999987322121 110 011222 2345
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-ceE
Q psy2085 106 SIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-DDQ 182 (358)
Q Consensus 106 ~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-~IK 182 (358)
|++-..+ +.||.|+.+|-|+++| +.+....++- +-..+| ..|.-+.||++|+ |++ -+-
T Consensus 582 ~~aTt~~-G~iavgs~~G~IRLyd-~~g~~AKT~lp~lG~pI-----------------~~iDvt~DGkwilaTc~tyLl 642 (794)
T PF08553_consen 582 CFATTED-GYIAVGSNKGDIRLYD-RLGKRAKTALPGLGDPI-----------------IGIDVTADGKWILATCKTYLL 642 (794)
T ss_pred EEEecCC-ceEEEEeCCCcEEeec-ccchhhhhcCCCCCCCe-----------------eEEEecCCCcEEEEeecceEE
Confidence 5555444 5889999999999999 5555544443 323455 7789999999988 588 777
Q ss_pred EEECC
Q psy2085 183 AWTKE 187 (358)
Q Consensus 183 IWD~~ 187 (358)
|.|..
T Consensus 643 Li~t~ 647 (794)
T PF08553_consen 643 LIDTL 647 (794)
T ss_pred EEEEe
Confidence 88863
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.92 Score=46.35 Aligned_cols=141 Identities=12% Similarity=0.095 Sum_probs=92.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee-------ccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC-------FDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~-------~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
|...|.++.+.|-|.-+ .++...|.|..|.... ..+|-+. .+...+.|. .-.....++.|+|++.-+
T Consensus 143 H~sPV~~i~y~qa~Ds~-vSiD~~gmVEyWs~e~-~~qfPr~~l~~~~K~eTdLy~f~----K~Kt~pts~Efsp~g~qi 216 (558)
T KOG0882|consen 143 HFSPVKKIRYNQAGDSA-VSIDISGMVEYWSAEG-PFQFPRTNLNFELKHETDLYGFP----KAKTEPTSFEFSPDGAQI 216 (558)
T ss_pred ccCceEEEEeeccccce-eeccccceeEeecCCC-cccCccccccccccccchhhccc----ccccCccceEEccccCcc
Confidence 44679999999999854 5667789999999874 2222111 111111110 001457899999999999
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccc----cccCCCccc-cccC----------CCc-eeeEEcCCCCEEEEec-
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS----NERDTEEKE-GKAS----------SDE-SSEEEEEEEEEEESSD- 179 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~----~~~~i~gl~-GtRs----------~~P-~sI~fs~d~~~llSaD- 179 (358)
++-+.|..|++++.+++..+..++-...... +.+.+.++. |-|. +.+ ..+.|...|++|+=.-
T Consensus 217 stl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~ 296 (558)
T KOG0882|consen 217 STLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTI 296 (558)
T ss_pred cccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeecc
Confidence 9999999999999999998887763211100 011111111 2211 111 6788999999988654
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
-||+.++.|++
T Consensus 297 ~gikvin~~tn~ 308 (558)
T KOG0882|consen 297 LGIKVINLDTNT 308 (558)
T ss_pred eeEEEEEeecCe
Confidence 89999999887
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=91.72 E-value=8.7 Score=36.52 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=30.6
Q ss_pred cccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 30 NDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 30 ~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
++|+-+|+ -+.+. ....++.+.|.||...|+|+...++.|--+++.
T Consensus 6 ~~y~~~i~-~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~ 52 (248)
T PF06977_consen 6 PDYRVVIE-AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD 52 (248)
T ss_dssp TT-EEEEE-EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcEEEEe-eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC
Confidence 45666666 34442 334589999999988898888888888777765
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=91.45 E-value=7.6 Score=37.31 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=74.8
Q ss_pred cceeEEEEeeCCCCE--eEEEEcCCCCEEEEEEecCC-eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGVS--TSVRISPDGQYVLSTGIYKP-RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~v--~~v~~SpDG~~LlatG~~d~-~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
...++++.+.|.... ..+.|.+||..+-+||-|.. .|+.+|+.+....-...++... .--.|++.
T Consensus 31 ~~~~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~------------FgEGit~~ 98 (264)
T PF05096_consen 31 YSYEVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRY------------FGEGITIL 98 (264)
T ss_dssp EEEEEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--------------EEEEEEE
T ss_pred eeeEEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccc------------cceeEEEE
Confidence 357899999987654 57888889988889987753 6999999876433222222211 11222332
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
. +.+..--=.+|+.-+||+.+-+.++++.-.... -.|+ .+++.|+.+| .+.++|..
T Consensus 99 ~-d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EG------------------WGLt--~dg~~Li~SDGS~~L~~~dP~ 157 (264)
T PF05096_consen 99 G-DKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEG------------------WGLT--SDGKRLIMSDGSSRLYFLDPE 157 (264)
T ss_dssp T-TEEEEEESSSSEEEEEETTTTEEEEEEE-SSS--------------------EEE--ECSSCEEEE-SSSEEEEE-TT
T ss_pred C-CEEEEEEecCCeEEEEccccceEEEEEecCCcc------------------eEEE--cCCCEEEEECCccceEEECCc
Confidence 2 234444345899999999999999888754332 3344 4566666655 88888887
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+.+
T Consensus 158 ~f~ 160 (264)
T PF05096_consen 158 TFK 160 (264)
T ss_dssp T-S
T ss_pred ccc
Confidence 655
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=91.35 E-value=2.3 Score=43.50 Aligned_cols=109 Identities=14% Similarity=0.144 Sum_probs=61.3
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eeeeccCceEEEEEeecCCCCC--eeEEEE
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FERCFDSEVVTFEILSDDYSSE--LNSIAI 109 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r~~d~e~v~f~~LS~D~s~~--In~i~~ 109 (358)
.+.+...|. ..-.+.+|..+|+|++. |+.+.=|+|-++|+..+..- +...-|+..-=.....+..... -+...-
T Consensus 296 ~l~~r~~l~D~~R~~~~i~~sP~~~la-A~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~ 374 (415)
T PF14655_consen 296 PLPMRFGLPDSKREGESICLSPSGRLA-AVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKS 374 (415)
T ss_pred ccceEEeeccCCceEEEEEECCCCCEE-EEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCC
Confidence 344444332 33458999999999865 44466789999999876431 2222233321111111110000 000001
Q ss_pred cCCC--CEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 110 NPVH--QLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 110 np~~--~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.. -|++-+-.-|.|+||.+|.+.+++.+.+..+
T Consensus 375 ~~~~~l~LvIyaprRg~lEvW~~~~g~Rv~a~~v~k~ 411 (415)
T PF14655_consen 375 SSRFALFLVIYAPRRGILEVWSMRQGPRVAAFNVGKG 411 (415)
T ss_pred CCcceEEEEEEeccCCeEEEEecCCCCEEEEEEeCCC
Confidence 1111 1556667789999999999999999886543
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=91.35 E-value=0.045 Score=57.64 Aligned_cols=111 Identities=18% Similarity=0.249 Sum_probs=71.7
Q ss_pred CCEeEEEEcC-CCCEEEEEE----ecCCeEEEEEcCCC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 46 GVSTSVRISP-DGQYVLSTG----IYKPRVRCYETDNL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 46 ~~v~~v~~Sp-DG~~LlatG----~~d~~IrvwDl~~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
-.|++++|++ |..+| |.| ..+..+.|||+..+ +.. .+...| +..+-.+.|+++|-.++.++.+|
T Consensus 103 r~Ct~lAwneLDtn~L-Aagldkhrnds~~~Iwdi~s~ltvP------ke~~~f---s~~~l~gqns~cwlrd~klvlaG 172 (783)
T KOG1008|consen 103 RPCTSLAWNELDTNHL-AAGLDKHRNDSSLKIWDINSLLTVP------KESPLF---SSSTLDGQNSVCWLRDTKLVLAG 172 (783)
T ss_pred ccccccccccccHHHH-HhhhhhhcccCCccceecccccCCC------cccccc---ccccccCccccccccCcchhhcc
Confidence 3589999998 45555 555 23446999999864 111 111111 11222678999999999999999
Q ss_pred eCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE-ec-ceEEEE
Q psy2085 120 TIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES-SD-DDQAWT 185 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS-aD-~IKIWD 185 (358)
.....|.++|+|... .+..+.. ..+ ..+...| .++++.+ .| .|-|||
T Consensus 173 m~sr~~~ifdlRqs~~~~~svnT--k~v-----------------qG~tVdp~~~nY~cs~~dg~iAiwD 223 (783)
T KOG1008|consen 173 MTSRSVHIFDLRQSLDSVSSVNT--KYV-----------------QGITVDPFSPNYFCSNSDGDIAIWD 223 (783)
T ss_pred cccchhhhhhhhhhhhhhhhhhh--hhc-----------------ccceecCCCCCceeccccCceeecc
Confidence 999999999998432 2222221 111 2355566 5677886 67 999999
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=90.99 E-value=4.3 Score=40.52 Aligned_cols=113 Identities=9% Similarity=-0.029 Sum_probs=63.4
Q ss_pred EeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 48 STSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+...++||||++|+.+-+.. .+|+|+|+.+...... .+.. .....++|.+++..|.....+.
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d------~i~~--------~~~~~~~W~~d~~~~~y~~~~~ 191 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPD------GIEN--------PKFSSVSWSDDGKGFFYTRFDE 191 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEE------EEEE--------EESEEEEECTTSSEEEEEECST
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCC------cccc--------cccceEEEeCCCCEEEEEEeCc
Confidence 34679999999987664333 3699999987532110 1110 0112389999977654444322
Q ss_pred -----------eEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E-ec-----ceEE
Q psy2085 124 -----------KVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S-SD-----DDQA 183 (358)
Q Consensus 124 -----------tV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-aD-----~IKI 183 (358)
.|.+|.+-+...- -.+......... ..+..++|+++|+ + .. .+.+
T Consensus 192 ~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~---------------~~~~~s~d~~~l~i~~~~~~~~s~v~~ 256 (414)
T PF02897_consen 192 DQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWF---------------VSVSRSKDGRYLFISSSSGTSESEVYL 256 (414)
T ss_dssp TTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSE---------------EEEEE-TTSSEEEEEEESSSSEEEEEE
T ss_pred ccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEE---------------EEEEecCcccEEEEEEEccccCCeEEE
Confidence 3777777665432 233332222100 4678889998876 2 22 3566
Q ss_pred EECCCC
Q psy2085 184 WTKEIK 189 (358)
Q Consensus 184 WD~~tG 189 (358)
-|..++
T Consensus 257 ~d~~~~ 262 (414)
T PF02897_consen 257 LDLDDG 262 (414)
T ss_dssp EECCCT
T ss_pred Eecccc
Confidence 677664
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=90.60 E-value=4.6 Score=44.17 Aligned_cols=83 Identities=20% Similarity=0.157 Sum_probs=49.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-------eCCCCccccc-cCCCccccccCCCc-eeeEEcCCC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL-------DCAFNCISNE-RDTEEKEGKASSDE-SSEEEEEEE 172 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L-------~~~~~~v~~~-~~i~gl~GtRs~~P-~sI~fs~d~ 172 (358)
-.|..|.+||.|.+||..|..|.+-+-=||.-..-+.+ .|...++... |.. ..+-. ..+.|||.+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~------~~~~~i~qv~WhP~s 158 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTS------NSSLEIKQVRWHPWS 158 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccC------CCCceEEEEEEcCCC
Confidence 47999999999999999999887766545431111212 2211111100 000 00001 789999974
Q ss_pred ---CEE--EEec-ceEEEECCCCc
Q psy2085 173 ---EEE--ESSD-DDQAWTKEIKK 190 (358)
Q Consensus 173 ---~~l--lSaD-~IKIWD~~tG~ 190 (358)
..| +++| ++++||+....
T Consensus 159 ~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 159 ESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCCCeEEEEecCCEEEEEecCCCC
Confidence 443 3799 99999997544
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=90.41 E-value=3 Score=34.82 Aligned_cols=61 Identities=18% Similarity=0.212 Sum_probs=40.5
Q ss_pred EcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 53 ISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 53 ~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
|..||+.=+..|+.|..||||+=.+. ..+-... +.|.+++-... +.|+.|..+|||-++|-
T Consensus 10 ~d~dg~~eLlvGs~D~~IRvf~~~e~--~~Ei~e~--------------~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 10 FDGDGENELLVGSDDFEIRVFKGDEI--VAEITET--------------DKVTSLCSLGG-GRFAYALANGTVGVYDR 70 (111)
T ss_pred cCCCCcceEEEecCCcEEEEEeCCcE--EEEEecc--------------cceEEEEEcCC-CEEEEEecCCEEEEEeC
Confidence 44466655567889999999985542 2221111 45666655554 67999999999998874
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.40 E-value=4.8 Score=39.44 Aligned_cols=131 Identities=18% Similarity=0.132 Sum_probs=70.0
Q ss_pred eeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEE
Q psy2085 15 AVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTF 93 (358)
Q Consensus 15 ~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f 93 (358)
+.-|. ...+|-.+-+++. -..+.|.+|..+.++..-.++..|+++. .-+.++++.+.... .-+.+.
T Consensus 38 ~L~w~DI~~~~i~r~~~~~----g~~~~~~~p~~~~~~~~~d~~g~Lv~~~---~g~~~~~~~~~~~~-t~~~~~----- 104 (307)
T COG3386 38 ALLWVDILGGRIHRLDPET----GKKRVFPSPGGFSSGALIDAGGRLIACE---HGVRLLDPDTGGKI-TLLAEP----- 104 (307)
T ss_pred EEEEEeCCCCeEEEecCCc----CceEEEECCCCcccceeecCCCeEEEEc---cccEEEeccCCcee-EEeccc-----
Confidence 34555 3445555666652 2356778888777776666666666543 24778887543221 111110
Q ss_pred EEeecCCC-CCeeEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 94 EILSDDYS-SELNSIAINPVHQLICVGTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 94 ~~LS~D~s-~~In~i~~np~~~llasGs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.++-. ..-|.+.+.|++.+.++... -|.|...|+ .+..+..+..+..
T Consensus 105 ---~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~----------------- 163 (307)
T COG3386 105 ---EDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLT----------------- 163 (307)
T ss_pred ---cCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEE-----------------
Confidence 01100 45688889999887665333 122333333 2222222221110
Q ss_pred CceeeEEcCCCCEEEEec
Q psy2085 162 DESSEEEEEEEEEEESSD 179 (358)
Q Consensus 162 ~P~sI~fs~d~~~llSaD 179 (358)
.|+.|+||||++.|+-+|
T Consensus 164 ~~NGla~SpDg~tly~aD 181 (307)
T COG3386 164 IPNGLAFSPDGKTLYVAD 181 (307)
T ss_pred ecCceEECCCCCEEEEEe
Confidence 118899999999998777
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.7 Score=46.52 Aligned_cols=71 Identities=11% Similarity=0.035 Sum_probs=58.4
Q ss_pred CCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEEec
Q psy2085 102 SELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEESSD 179 (358)
Q Consensus 102 ~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llSaD 179 (358)
..|..++|+|.. +|+..++-+.+|++.|+++..++.....+... .+++|.-+.. .|...|
T Consensus 194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~------------------wSC~wDlde~h~IYaGl 255 (463)
T KOG1645|consen 194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQI------------------WSCCWDLDERHVIYAGL 255 (463)
T ss_pred hhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCc------------------eeeeeccCCcceeEEec
Confidence 579999999975 59999999999999999999998888876433 6788987765 455666
Q ss_pred ---ceEEEECCCCc
Q psy2085 180 ---DDQAWTKEIKK 190 (358)
Q Consensus 180 ---~IKIWD~~tG~ 190 (358)
.|-|+|++.-+
T Consensus 256 ~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 256 QNGMVLVYDMRQPE 269 (463)
T ss_pred cCceEEEEEccCCC
Confidence 99999998655
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=89.78 E-value=0.94 Score=45.63 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=55.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGt 124 (358)
-.|..++|||..+=|+..++-+..|+|.|+.+...- ..... | ..+-+|+|.-+ .+.|-.|-..|.
T Consensus 194 ~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~v----------ssy~a---~-~~~wSC~wDlde~h~IYaGl~nG~ 259 (463)
T KOG1645|consen 194 SFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVV----------SSYIA---Y-NQIWSCCWDLDERHVIYAGLQNGM 259 (463)
T ss_pred hhhhhhccCccccceeeeeccCceEEEEecccceee----------eheec---c-CCceeeeeccCCcceeEEeccCce
Confidence 368999999988866677788899999999864211 10000 1 45788999765 457778888999
Q ss_pred EEEEeCCCCc
Q psy2085 125 VEAWDPRMKV 134 (358)
Q Consensus 125 V~iWD~Rs~~ 134 (358)
|-++|+|..+
T Consensus 260 VlvyD~R~~~ 269 (463)
T KOG1645|consen 260 VLVYDMRQPE 269 (463)
T ss_pred EEEEEccCCC
Confidence 9999999754
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=89.77 E-value=7 Score=38.31 Aligned_cols=88 Identities=10% Similarity=0.082 Sum_probs=57.5
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE---
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG--- 119 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG--- 119 (358)
.|+....++.+|+...+++.+--+++ .-+||..+....... .+++....-=..+|||++.+|.+.
T Consensus 3 lP~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~-----------~a~~gRHFyGHg~fs~dG~~LytTEnd 71 (305)
T PF07433_consen 3 LPARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRL-----------WAPPGRHFYGHGVFSPDGRLLYTTEND 71 (305)
T ss_pred CCccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEE-----------cCCCCCEEecCEEEcCCCCEEEEeccc
Confidence 46667789999966667777766664 778998876543211 111111122356799999987664
Q ss_pred --eCCCeEEEEeCC-CCceeEEEeCC
Q psy2085 120 --TIEGKVEAWDPR-MKVKAGTLDCA 142 (358)
Q Consensus 120 --s~DGtV~iWD~R-s~~~i~~L~~~ 142 (358)
+..|.|-+||.+ +-..++.+..+
T Consensus 72 ~~~g~G~IgVyd~~~~~~ri~E~~s~ 97 (305)
T PF07433_consen 72 YETGRGVIGVYDAARGYRRIGEFPSH 97 (305)
T ss_pred cCCCcEEEEEEECcCCcEEEeEecCC
Confidence 346999999998 45667777643
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=89.34 E-value=2.8 Score=42.97 Aligned_cols=112 Identities=16% Similarity=0.138 Sum_probs=65.5
Q ss_pred CEeEEEEcCCCCEEEEE---EecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CC
Q psy2085 47 VSTSVRISPDGQYVLST---GIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~Llat---G~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~D 122 (358)
.+..-+|+|||+.++-. ....+++.++|+++.... -++.|. +.--.-+|+|++..|+..+ .|
T Consensus 194 ~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~-------~i~~~~-------g~~~~P~fspDG~~l~f~~~rd 259 (425)
T COG0823 194 LILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRP-------VILNFN-------GNNGAPAFSPDGSKLAFSSSRD 259 (425)
T ss_pred ceeccccCcCCCceEEEEEecCCCceEEEEeccCCccc-------eeeccC-------CccCCccCCCCCCEEEEEECCC
Confidence 34566899999986544 222267888998864211 011110 2233557999998666554 47
Q ss_pred CeEEEE--eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-----ceEEEECCCCc
Q psy2085 123 GKVEAW--DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-----DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iW--D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-----~IKIWD~~tG~ 190 (358)
|...+| |+.+++. ..|....... ..=.|+|||++|+ .+| .|-+.|.+.+.
T Consensus 260 g~~~iy~~dl~~~~~-~~Lt~~~gi~-----------------~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~ 317 (425)
T COG0823 260 GSPDIYLMDLDGKNL-PRLTNGFGIN-----------------TSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQ 317 (425)
T ss_pred CCccEEEEcCCCCcc-eecccCCccc-----------------cCccCCCCCCEEEEEeCCCCCcceEEECCCCCc
Confidence 776665 7777763 3343222111 2236899999887 455 56666766554
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=88.98 E-value=1.9 Score=44.15 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=25.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCc
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLS 79 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~ls 79 (358)
|++....-+|||||++|+-+..-++ .|.++|+....
T Consensus 236 ~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~ 273 (425)
T COG0823 236 FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN 273 (425)
T ss_pred cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCc
Confidence 4555566799999999987765555 46666666543
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.94 E-value=12 Score=37.45 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=75.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe--CCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT--IEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs--~DG 123 (358)
.-..+.++++|..+.++...++.|.+.|+...... .+..+. ..-..++++|+++ +.++-+ .++
T Consensus 75 ~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~----------~~~~vG----~~P~~~~~~~~~~~vYV~n~~~~~~ 140 (381)
T COG3391 75 YPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVL----------GSIPVG----LGPVGLAVDPDGKYVYVANAGNGNN 140 (381)
T ss_pred cccceeeCCCCCeEEEecCCCCeEEEEcCccccee----------eEeeec----cCCceEEECCCCCEEEEEecccCCc
Confidence 34688999999988877766789999996643211 111111 1346788999985 444444 379
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEI 188 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~t 188 (358)
+|.+-|..+++.+.++.....+ ..++++|+|.+++-+ + +|-+.|..+
T Consensus 141 ~vsvid~~t~~~~~~~~vG~~P------------------~~~a~~p~g~~vyv~~~~~~~v~vi~~~~ 191 (381)
T COG3391 141 TVSVIDAATNKVTATIPVGNTP------------------TGVAVDPDGNKVYVTNSDDNTVSVIDTSG 191 (381)
T ss_pred eEEEEeCCCCeEEEEEecCCCc------------------ceEEECCCCCeEEEEecCCCeEEEEeCCC
Confidence 9999999999988886654434 458899999877632 3 777777654
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=88.74 E-value=1.8 Score=28.31 Aligned_cols=30 Identities=33% Similarity=0.465 Sum_probs=22.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC--CeEEEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK--PRVRCY 73 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d--~~Irvw 73 (358)
.++.-....|||||++|+-++..+ +.-.||
T Consensus 7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 445678899999999998777766 666665
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=88.50 E-value=7.8 Score=37.41 Aligned_cols=91 Identities=19% Similarity=0.223 Sum_probs=60.2
Q ss_pred EcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce-------EEEEEeecCCC--------------------CCee
Q psy2085 53 ISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-------VTFEILSDDYS--------------------SELN 105 (358)
Q Consensus 53 ~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-------v~f~~LS~D~s--------------------~~In 105 (358)
+-||.+.++..|+..+.+..-|....+++++......+ -+|..+.- |+ +.|.
T Consensus 18 V~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~vvgdfVV~GC-y~g~lYfl~~~tGs~~w~f~~~~~vk 96 (354)
T KOG4649|consen 18 VCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIVVGDFVVLGC-YSGGLYFLCVKTGSQIWNFVILETVK 96 (354)
T ss_pred EecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEEECCEEEEEE-ccCcEEEEEecchhheeeeeehhhhc
Confidence 34566677778888888888888888877764332111 12222210 11 2222
Q ss_pred EEE-EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 106 SIA-INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 106 ~i~-~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
+=+ ..++++++-+|+.||+...-|+++..++..+.++..
T Consensus 97 ~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~ 136 (354)
T KOG4649|consen 97 VRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGG 136 (354)
T ss_pred cceEEcCCCceEEEecCCCcEEEecccccceEEecccCCc
Confidence 222 246789999999999999999999999988876543
|
|
| >PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4 | Back alignment and domain information |
|---|
Probab=88.40 E-value=0.84 Score=36.60 Aligned_cols=68 Identities=22% Similarity=0.279 Sum_probs=45.6
Q ss_pred EEEEeecCCceeeee------eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEc
Q psy2085 5 YCYQTNWHKQAVTLV------IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYET 75 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~------~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl 75 (358)
|--..|.......|. ...+|.|+.|+...+---|+..+.|| |.|++|||+++|+.+=+...+|.=|-+
T Consensus 13 YfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~~~L~fp---NGVals~d~~~vlv~Et~~~Ri~rywl 86 (89)
T PF03088_consen 13 YFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLLDGLYFP---NGVALSPDESFVLVAETGRYRILRYWL 86 (89)
T ss_dssp EEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEEEEESSE---EEEEE-TTSSEEEEEEGGGTEEEEEES
T ss_pred EEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEehhCCCcc---CeEEEcCCCCEEEEEeccCceEEEEEE
Confidence 333444444455555 47899999999987777788888888 899999999999988766666544433
|
3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B. |
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=87.96 E-value=5.1 Score=42.80 Aligned_cols=117 Identities=9% Similarity=-0.051 Sum_probs=62.0
Q ss_pred CEeEEEEcCCCCEEEEEEe-------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGI-------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~-------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
.+...++||||+.++.+-. +..+|.+++..... . . +++. .....-.|+|++..|++.
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~-~----------~--lt~g---~~~t~PsWspDG~~lw~v 414 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA-V----------Q--VLEG---HSLTRPSWSLDADAVWVV 414 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc-e----------e--eecC---CCCCCceECCCCCceEEE
Confidence 4678999999999877752 23355555542211 0 0 0111 125667899998877776
Q ss_pred eCC-CeEEEEeCCCCceeEEEeCCCCccc--cccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEE---EECCCCc
Q psy2085 120 TIE-GKVEAWDPRMKVKAGTLDCAFNCIS--NERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQA---WTKEIKK 190 (358)
Q Consensus 120 s~D-GtV~iWD~Rs~~~i~~L~~~~~~v~--~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKI---WD~~tG~ 190 (358)
+.. ..+.+.+-.....+..+........ ....+ .++.|||||..|+- .+ .|.| =....|.
T Consensus 415 ~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~I-----------ssl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 415 VDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPI-----------SELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQ 482 (591)
T ss_pred ecCcceEEEeccCCCceEEEEeccCchhhhccCCCc-----------CeEEECCCCCEEEEEECCEEEEEEEEeCCCCc
Confidence 543 2344433222223333322111100 00112 78999999998873 55 4444 4444554
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=87.69 E-value=3.7 Score=45.23 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=66.0
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+=+|-+-++..++.|+ +..+.++-. ....+|--...-+|++-+.+|. | |.|+.+|.||+||--. .
T Consensus 543 e~tflGls~n~lfriDpR~~~~k~v~--------~~~k~Y~~~~~Fs~~aTt~~G~-i-avgs~~G~IRLyd~~g--~-- 608 (794)
T PF08553_consen 543 EQTFLGLSDNSLFRIDPRLSGNKLVD--------SQSKQYSSKNNFSCFATTEDGY-I-AVGSNKGDIRLYDRLG--K-- 608 (794)
T ss_pred CceEEEECCCceEEeccCCCCCceee--------ccccccccCCCceEEEecCCce-E-EEEeCCCcEEeecccc--h--
Confidence 4467778888888998 443333221 1123344445578999999995 4 6788999999999321 1
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
| +- .+=|....+|..|+++.+|.+|.. +.+..+-+.|.
T Consensus 609 -~---AK-----T~lp~lG~pI~~iDvt~DGkwila-Tc~tyLlLi~t 646 (794)
T PF08553_consen 609 -R---AK-----TALPGLGDPIIGIDVTADGKWILA-TCKTYLLLIDT 646 (794)
T ss_pred -h---hh-----hcCCCCCCCeeEEEecCCCcEEEE-eecceEEEEEE
Confidence 1 10 011222268999999999986654 44567778775
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=87.54 E-value=24 Score=38.96 Aligned_cols=129 Identities=15% Similarity=0.083 Sum_probs=75.1
Q ss_pred eEEEEeecCCc-----eeeee-eccCcccCCC-cccc--cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEE
Q psy2085 4 EYCYQTNWHKQ-----AVTLV-IIGGRYLLPT-NDIR--RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYE 74 (358)
Q Consensus 4 ~~~~~~~~~~~-----~~~~~-~~~~r~lk~d-~~~~--~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwD 74 (358)
.|.++|.-|.+ +.-|+ +... +++ |..- .||-.++-=.-|..+.++++|.|-+.+ |.|=.+|.|-++.
T Consensus 78 ~~L~sv~Ed~~~np~llkiw~lek~~---~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~I-v~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 78 NFLFSVGEDEQGNPVLLKIWDLEKVD---KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTI-VCGFTNGLVICYK 153 (933)
T ss_pred eEEEEEeecCCCCceEEEEecccccC---CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEE-EEEecCcEEEEEc
Confidence 46777777766 55677 3322 344 4332 222221110123568899999997765 7888889999886
Q ss_pred cCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce-eEEEeCCCCc
Q psy2085 75 TDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK-AGTLDCAFNC 145 (358)
Q Consensus 75 l~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~-i~~L~~~~~~ 145 (358)
=.- .-+|+. .+ ..+.+..++|+.+++..++..+.....-..|.++.+..+.+ ..+++.+.-+
T Consensus 154 GDi---~RDrgs-----r~-~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~ 216 (933)
T KOG2114|consen 154 GDI---LRDRGS-----RQ-DYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGIS 216 (933)
T ss_pred Ccc---hhcccc-----ce-eeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCcc
Confidence 321 112222 11 12233337899999998888644445556799998874443 3446654433
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=87.23 E-value=5.5 Score=41.71 Aligned_cols=126 Identities=16% Similarity=0.161 Sum_probs=77.1
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCE--EEE----EEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEE
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQY--VLS----TGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIA 108 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~--Lla----tG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~ 108 (358)
|-+++..+.|..-|+-+.++||+++ |-+ .|-.+..|-=||.+=.. ..+-...-+.+|+..-|--|
T Consensus 365 ~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~---------~~kl~~~q~kqy~~k~nFsc 435 (644)
T KOG2395|consen 365 RGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQG---------KNKLAVVQSKQYSTKNNFSC 435 (644)
T ss_pred cceeeeEeeccCCcceeeccCCcchhcccccccEEeecCCceEEecccccC---------cceeeeeeccccccccccce
Confidence 4467777888777999999998643 211 14456667777765111 00111223455553333323
Q ss_pred Ec-CCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Eec-ceEEE
Q psy2085 109 IN-PVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SSD-DDQAW 184 (358)
Q Consensus 109 ~n-p~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-SaD-~IKIW 184 (358)
+. -..+.||.||.+|-|+++|- .+....+.- +-..+| +.|.-+.+|.+|+ |++ .+-+-
T Consensus 436 ~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I-----------------~hVdvtadGKwil~Tc~tyLlLi 497 (644)
T KOG2395|consen 436 FATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAI-----------------KHVDVTADGKWILATCKTYLLLI 497 (644)
T ss_pred eeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCce-----------------eeEEeeccCcEEEEecccEEEEE
Confidence 32 23458999999999999994 666655543 323344 6678888999988 588 66666
Q ss_pred ECC
Q psy2085 185 TKE 187 (358)
Q Consensus 185 D~~ 187 (358)
|..
T Consensus 498 ~t~ 500 (644)
T KOG2395|consen 498 DTL 500 (644)
T ss_pred EEe
Confidence 653
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=87.20 E-value=6.5 Score=41.25 Aligned_cols=171 Identities=11% Similarity=0.030 Sum_probs=87.1
Q ss_pred eecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEE-EEcC-CCCEEEEEEecCCeEEEEEcCCCceeee--e
Q psy2085 9 TNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSV-RISP-DGQYVLSTGIYKPRVRCYETDNLSMKFE--R 84 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v-~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~--r 84 (358)
-.+|...-+|.++-+-+|+.-++.+.-+|+.... .+.. .++| =-+.+++ |..| .+..||-...++... |
T Consensus 7 ~~~d~~~~~~~p~~~~~lr~Vl~~~~ptea~~p~-----s~~lP~V~~l~trN~~~-~~gD-~lf~Wd~~ds~Llv~~lR 79 (741)
T KOG4460|consen 7 PVGDGELWQWLPNHFLRLREVLKNQSPTEAEKPA-----SSSLPSVPPLLTRNVVF-GLGD-ELFLWDGEDSSLLVVRLR 79 (741)
T ss_pred CCCcchhhhcCCCccccHhHHhhhcCchhhcccc-----cCCCCCCccccccchhc-ccCC-EEEEEecCcceEEEEEec
Confidence 3455555556655554555444444444433222 1111 1112 0122333 3334 788888876544322 2
Q ss_pred ec---cC--ceEEEEEeecCCC--CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccc-cCCCccc
Q psy2085 85 CF---DS--EVVTFEILSDDYS--SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNE-RDTEEKE 156 (358)
Q Consensus 85 ~~---d~--e~v~f~~LS~D~s--~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~-~~i~gl~ 156 (358)
.. .+ -.+.+..+-|+-. -.|..|..||.|..+|-.|.+|.+-..=+|.--+-..+......|++. +.+
T Consensus 80 ~~~~~~~~~a~~q~q~l~P~~~V~feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i---- 155 (741)
T KOG4460|consen 80 GPSGGGEEPALSQYQRLLPINPVLFEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPV---- 155 (741)
T ss_pred cCCCCcccccccccceeccCCcceEEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecc----
Confidence 11 01 1233444444422 468889999999999999999988765444322223333222222110 111
Q ss_pred ccc--CCCc----eeeEEcCCC----CE-EEEec-ceEEEECCCCc
Q psy2085 157 GKA--SSDE----SSEEEEEEE----EE-EESSD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtR--s~~P----~sI~fs~d~----~~-llSaD-~IKIWD~~tG~ 190 (358)
|++ .+.| .+..|||++ .. |+++| +|+|+|...-+
T Consensus 156 ~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~t 201 (741)
T KOG4460|consen 156 AERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPT 201 (741)
T ss_pred cceeeccCCceeeeeccccCCccCCceEEEEecCcEEEEEecCCcc
Confidence 110 0001 788999976 23 34799 99999997544
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=86.33 E-value=0.99 Score=49.67 Aligned_cols=47 Identities=13% Similarity=0.295 Sum_probs=43.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
..-+|++|+-..+.|+.|+-.|.|++++.-+|...+..+||.++++.
T Consensus 1102 ~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~ 1148 (1516)
T KOG1832|consen 1102 ALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTL 1148 (1516)
T ss_pred cceeeEEeecCCceEEeeeccceEEEEEccCcccccccccccccccc
Confidence 67899999999999999999999999999999999999999988753
|
|
| >PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I [] | Back alignment and domain information |
|---|
Probab=85.16 E-value=34 Score=37.68 Aligned_cols=153 Identities=12% Similarity=0.098 Sum_probs=82.3
Q ss_pred EEeeCCCCEeEEEEc---C----CCCEEEEEEecCCeEEEEEcCCCce-ee----eeeccCceEEEEEeecC--CCCCee
Q psy2085 40 QDFEMPGVSTSVRIS---P----DGQYVLSTGIYKPRVRCYETDNLSM-KF----ERCFDSEVVTFEILSDD--YSSELN 105 (358)
Q Consensus 40 qdfe~~~~v~~v~~S---p----DG~~LlatG~~d~~IrvwDl~~lsl-k~----~r~~d~e~v~f~~LS~D--~s~~In 105 (358)
-.+++...|..|+|+ . ...+|++= -...+.|+...-... .. .-+++...+ ..++.+ .....-
T Consensus 74 w~i~~~~PI~qI~fa~~~~~~~~~~~~l~Vr--t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l--~~i~~~~tgg~~~a 149 (765)
T PF10214_consen 74 WSIDDGSPIKQIKFATLSESFDEKSRWLAVR--TETSTTILRPEYHRVISSIRSRPSRIDPNPL--LTISSSDTGGFPHA 149 (765)
T ss_pred eEcCCCCCeeEEEecccccccCCcCcEEEEE--cCCEEEEEEcccccccccccCCcccccccee--EEechhhcCCCccc
Confidence 333467789999999 3 22466542 234677777221100 00 011222221 112211 114677
Q ss_pred EEEEcCC-CCEEEEEeCCCeEEEEeC--CCCceeEEE--e-CCCCcc-ccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 106 SIAINPV-HQLICVGTIEGKVEAWDP--RMKVKAGTL--D-CAFNCI-SNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 106 ~i~~np~-~~llasGs~DGtV~iWD~--Rs~~~i~~L--~-~~~~~v-~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
.|+|||. .+.||.-...|.-.|||+ +.+.....+ . .+.+.+ ...-+.++- ..|.|.++.+.|+-+
T Consensus 150 Dv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w--------~rI~W~~~~~~lLv~ 221 (765)
T PF10214_consen 150 DVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNW--------KRILWVSDSNRLLVC 221 (765)
T ss_pred eEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcc--------eeeEecCCCCEEEEE
Confidence 8999996 458999999999999999 222211111 1 111111 000011111 689999887777776
Q ss_pred c--ceEEEECCCCcEEe-cCCCCCccccc
Q psy2085 179 D--DDQAWTKEIKKTYN-LGPAPKWCGFL 204 (358)
Q Consensus 179 D--~IKIWD~~tG~~y~-lgpap~Wcsfl 204 (358)
| .+.+.|++++.... |+-+-.|...|
T Consensus 222 ~r~~l~~~d~~~~~~~~~l~~~~~~~~Il 250 (765)
T PF10214_consen 222 NRSKLMLIDFESNWQTEYLVTAKTWSWIL 250 (765)
T ss_pred cCCceEEEECCCCCccchhccCCChhhee
Confidence 6 99999998776322 44444554444
|
These proteins are found in fungi. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=84.50 E-value=9.7 Score=41.69 Aligned_cols=85 Identities=15% Similarity=0.177 Sum_probs=55.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC---ceeeeeeccCceEEE-----EEeecCCCCCeeEEEEcCC---CCE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNL---SMKFERCFDSEVVTF-----EILSDDYSSELNSIAINPV---HQL 115 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l---slk~~r~~d~e~v~f-----~~LS~D~s~~In~i~~np~---~~l 115 (358)
.|..|.+||+|++|+..|. ..|-|-.+..- .-.|+.+........ .++..+.+..|..+.|+|. +..
T Consensus 86 ~v~~i~~n~~g~~lal~G~--~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGP--RGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eEEEEEECCCCCEEEEEcC--CcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 4999999999999988874 46888888641 111222111111111 1122222367999999996 457
Q ss_pred EEEEeCCCeEEEEeCCCC
Q psy2085 116 ICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~ 133 (358)
|+.=++|++++++|+...
T Consensus 164 l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDISDP 181 (717)
T ss_pred EEEEecCCEEEEEecCCC
Confidence 777789999999999753
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=84.41 E-value=5.7 Score=41.53 Aligned_cols=40 Identities=13% Similarity=0.175 Sum_probs=31.5
Q ss_pred CeeEEEEcC----CCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 103 ELNSIAINP----VHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 103 ~In~i~~np----~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
.+.++++++ ...+|++-+.|+++|+||+.+++++.+.+..
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~~~~ 259 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATIDLL 259 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEEETT
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEeccc
Confidence 456666666 5678889999999999999999999888765
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=84.13 E-value=12 Score=31.19 Aligned_cols=73 Identities=23% Similarity=0.311 Sum_probs=43.0
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEE---cCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAI---NPVH 113 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~---np~~ 113 (358)
|++..+.-.+.+.++.-...+++. .|...|+|.||+=.+- .+ |.. +. ..++++++ +-++
T Consensus 34 e~~~Ei~e~~~v~~L~~~~~~~F~--Y~l~NGTVGvY~~~~R--lW-RiK-SK------------~~~~~~~~~D~~gdG 95 (111)
T PF14783_consen 34 EIVAEITETDKVTSLCSLGGGRFA--YALANGTVGVYDRSQR--LW-RIK-SK------------NQVTSMAFYDINGDG 95 (111)
T ss_pred cEEEEEecccceEEEEEcCCCEEE--EEecCCEEEEEeCcce--ee-eec-cC------------CCeEEEEEEcCCCCC
Confidence 467777777788888888887754 4455677777763211 11 110 00 22444444 3333
Q ss_pred -CEEEEEeCCCeEEE
Q psy2085 114 -QLICVGTIEGKVEA 127 (358)
Q Consensus 114 -~llasGs~DGtV~i 127 (358)
.-|++|=.+|.|++
T Consensus 96 ~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 96 VPELIVGWSNGKVEV 110 (111)
T ss_pred ceEEEEEecCCeEEe
Confidence 26888889999875
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=83.90 E-value=7.4 Score=36.12 Aligned_cols=90 Identities=10% Similarity=0.092 Sum_probs=53.2
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEe-ecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEIL-SDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~L-S~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
..+.+..+|+||++. +..|.++|||+.++...+...-=.+.+..... +..-...|..+.++.+|--|++= .+|..-.
T Consensus 14 ~~~~l~~~~~~Ll~i-T~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~ 91 (219)
T PF07569_consen 14 PVSFLECNGSYLLAI-TSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYS 91 (219)
T ss_pred ceEEEEeCCCEEEEE-eCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEE
Confidence 345566789998765 56899999999976543322000111110000 00112678888898877766653 4588899
Q ss_pred EeCCCCceeEEEe
Q psy2085 128 WDPRMKVKAGTLD 140 (358)
Q Consensus 128 WD~Rs~~~i~~L~ 140 (358)
||..-+.-+...+
T Consensus 92 y~~~L~~W~~vsd 104 (219)
T PF07569_consen 92 YSPDLGCWIRVSD 104 (219)
T ss_pred eccccceeEEecc
Confidence 9876665544433
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4 | Back alignment and domain information |
|---|
Probab=82.66 E-value=9.7 Score=30.49 Aligned_cols=48 Identities=19% Similarity=0.221 Sum_probs=29.9
Q ss_pred EeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEE
Q psy2085 119 GTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAW 184 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIW 184 (358)
|..+|.+-.|||++++.--.+++-.-+ +.|+.++|++.|+-+. +.|.|
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~fp------------------NGVals~d~~~vlv~Et~~~Ri~ryw 85 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLYFP------------------NGVALSPDESFVLVAETGRYRILRYW 85 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEESSE------------------EEEEE-TTSSEEEEEEGGGTEEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhCCCcc------------------CeEEEcCCCCEEEEEeccCceEEEEE
Confidence 345788888999998754444432222 7899999999877432 56666
|
3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=82.16 E-value=7.1 Score=25.43 Aligned_cols=35 Identities=14% Similarity=0.028 Sum_probs=26.8
Q ss_pred CCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 111 PVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 111 p~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
|+++ ++++.-.+++|.++|+.++..+..+.....+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P 36 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYP 36 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCC
Confidence 4555 5666667899999999999988888875544
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=80.81 E-value=6.9 Score=36.34 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=43.9
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc--eeeEEcCCCCEEEE-ec-ce
Q psy2085 106 SIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE--SSEEEEEEEEEEES-SD-DD 181 (358)
Q Consensus 106 ~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P--~sI~fs~d~~~llS-aD-~I 181 (358)
++.+...++.|.+-+.+|.+.+||+.+++.+..-. ...++-..... .+ +...| .++..+.+|.-|++ ++ ..
T Consensus 15 ~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~-Si~pll~~~~~---~~-~~~~~~i~~~~lt~~G~PiV~lsng~~ 89 (219)
T PF07569_consen 15 VSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPV-SIAPLLNSSPV---SD-KSSSPNITSCSLTSNGVPIVTLSNGDS 89 (219)
T ss_pred eEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCc-cHHHHhccccc---cc-CCCCCcEEEEEEcCCCCEEEEEeCCCE
Confidence 33455566778888999999999999987642210 00011000000 00 00011 66777788877776 55 66
Q ss_pred EEEECCCC
Q psy2085 182 QAWTKEIK 189 (358)
Q Consensus 182 KIWD~~tG 189 (358)
-.||.+-+
T Consensus 90 y~y~~~L~ 97 (219)
T PF07569_consen 90 YSYSPDLG 97 (219)
T ss_pred EEeccccc
Confidence 77776533
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.85 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.83 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.82 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.81 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.81 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.79 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.79 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.79 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.79 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.79 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.78 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.78 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.78 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.77 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.76 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.76 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.76 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.76 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.76 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.76 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.76 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.76 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.76 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.75 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.75 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.75 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.74 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.74 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.74 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.74 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.74 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.73 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.73 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.72 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.72 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.72 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.72 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.71 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.71 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.71 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.71 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.7 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.7 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.7 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.69 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.69 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.69 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.68 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.68 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.68 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.68 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.68 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.68 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.68 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.68 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.68 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.68 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.67 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.67 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.67 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.67 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.67 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.67 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.66 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.65 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.65 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.65 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.65 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.65 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.65 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.64 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.64 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.64 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.64 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.63 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.63 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.63 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.63 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.63 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.63 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.63 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.63 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.63 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.62 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.62 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.62 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.62 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.62 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.62 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.61 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.61 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.61 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.61 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.61 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.61 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.61 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.6 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.6 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.6 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.6 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.6 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.6 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.59 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.59 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.58 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.58 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.58 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.58 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.58 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.58 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.57 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.56 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.56 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.55 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.55 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.52 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.51 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.51 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.49 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.49 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.47 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.44 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.44 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.43 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.41 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.4 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.39 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.37 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.36 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.36 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.32 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.3 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.26 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.24 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.21 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.17 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.15 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.14 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.14 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.13 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.12 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.12 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.11 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.08 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.07 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.06 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.06 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.04 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.03 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.99 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.98 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.95 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.87 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.87 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.86 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.85 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.83 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.8 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.78 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.77 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.74 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.72 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.69 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.69 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.54 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.51 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.5 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.49 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.45 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.44 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.42 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.41 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.35 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.29 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.29 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.27 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.21 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 98.21 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.2 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.18 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.18 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.18 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.16 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.14 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.13 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.12 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.11 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.09 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.05 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.05 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.03 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.03 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.97 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.95 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 97.91 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.82 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.81 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.8 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 97.77 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.75 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 97.74 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.73 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.62 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.57 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.55 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.53 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 97.53 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.51 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.47 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 97.45 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.45 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.42 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.41 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.39 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.39 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.38 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 97.34 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 97.3 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.26 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.25 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.18 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.14 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 97.08 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.08 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.01 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 96.95 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 96.91 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 96.88 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 96.83 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 96.79 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 96.78 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.67 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 96.62 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 96.53 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 96.48 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 96.47 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 96.39 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 96.3 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 96.05 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 95.99 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 95.88 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 95.71 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 95.69 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 95.67 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 95.65 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 95.44 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 95.09 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 94.97 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 94.87 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 94.63 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 93.94 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 93.81 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 93.74 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 93.42 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 93.4 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 93.22 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 92.81 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 92.14 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 91.96 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 91.27 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 91.27 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 91.25 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 90.93 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 90.9 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 90.82 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 90.72 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 90.67 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 90.63 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 90.44 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 89.98 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 89.97 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 89.81 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 89.29 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 89.25 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 89.23 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 88.82 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 88.74 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 88.52 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 88.23 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 88.12 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 87.84 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 87.49 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 86.84 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 85.59 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 85.08 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 85.0 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 84.68 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 84.24 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 83.2 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 82.93 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 82.26 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 82.26 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 82.1 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 81.96 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 81.24 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 80.71 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 80.37 |
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.2e-20 Score=180.99 Aligned_cols=125 Identities=14% Similarity=0.113 Sum_probs=99.3
Q ss_pred CCEeEEEEcCCCCEEE-EEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-----------------------
Q psy2085 46 GVSTSVRISPDGQYVL-STGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS----------------------- 101 (358)
Q Consensus 46 ~~v~~v~~SpDG~~Ll-atG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s----------------------- 101 (358)
..+.+|+|||||++|+ |+|++|++|+|||+.+....+.-....++..+ .+|||..
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v-~fspdg~~l~s~s~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDL-HFSTDGKVVAYITGSSLEVISTVTGSCIAR 212 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEE-EECTTSSEEEEECSSCEEEEETTTCCEEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEE-EEccCCceEEeccceeEEEEEeccCcceee
Confidence 4588999999999875 56778999999999876554432222232221 1222221
Q ss_pred ---------------------------------------------------------CCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 102 ---------------------------------------------------------SELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 102 ---------------------------------------------------------~~In~i~~np~~~llasGs~DGt 124 (358)
..|++|+|+|++++||+|+.||+
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 56999999999999999999999
Q ss_pred EEEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
|++||+++++++.++ .+|...| ++|+|||||++|+| .| +|||||+..
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V-----------------~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAI-----------------TEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCE-----------------EEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEECCCCcEEEEecCcccCCE-----------------EEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999875 6888887 88999999999997 57 999999964
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.83 E-value=9.5e-19 Score=164.11 Aligned_cols=155 Identities=17% Similarity=0.216 Sum_probs=120.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..++|.|+++..|+ +... .+.+.+ .|...|.+++|+| ++.+ +++|+.|++|+|||+.+...
T Consensus 110 ~~l~sgs~D~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~~~-l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 110 PYVLSGSDDLTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAFNPKDPST-FASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp SEEEEEETTSCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEECTTCTTE-EEEEETTSEEEEEETTCSSC
T ss_pred CEEEEECCCCeEEEEECCCCc-------------chhhhhcccCCcEEEEEECCCCCCE-EEEEeCCCeEEEEECCCCCc
Confidence 4788999999999999 3321 234445 3778899999999 5565 57889999999999976432
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.+.. ...+...|++++|+| ++.+|++|+.||+|++||+++++++.++.+|...+
T Consensus 176 ~~~~------------~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v------------ 231 (304)
T 2ynn_A 176 NFTL------------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV------------ 231 (304)
T ss_dssp SEEE------------ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE------------
T ss_pred ccee------------ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCE------------
Confidence 2211 112225789999987 67799999999999999999999999999998877
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE---EecCCCCCcc
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT---YNLGPAPKWC 201 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~---y~lgpap~Wc 201 (358)
..+.|+|++..|+| .| +|+|||..+++. +..+..+.||
T Consensus 232 -----~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 232 -----SFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp -----EEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred -----EEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 78999999999997 47 999999999883 2334445564
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.6e-19 Score=168.86 Aligned_cols=160 Identities=12% Similarity=0.109 Sum_probs=111.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--e
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--F 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~ 82 (358)
+..+++.|+++..|+-...+.+ .+.......|...|++|+|+|||++| ++|+.|++|+|||+.+.... +
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~--------~~~~~~~~~H~~~V~~v~~spdg~~l-~sgs~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETL--------IVSKFCKYEHDDIVSTVSVLSSGTQA-VSGSKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSC--------EEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEECCCEEEEEeccCCCce--------eEeeccccCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEE
Confidence 5678999999999993222111 11112234688999999999999987 67889999999999875432 1
Q ss_pred eeeccCceEEEEEe-----------ecCCC---------------------CCeeEEEEcCC-CCEEEEEeCCCeEEEEe
Q psy2085 83 ERCFDSEVVTFEIL-----------SDDYS---------------------SELNSIAINPV-HQLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 ~r~~d~e~v~f~~L-----------S~D~s---------------------~~In~i~~np~-~~llasGs~DGtV~iWD 129 (358)
..|. ..+ ....+ +.|.+ ..+++++|+|+ +.+|++|+.||+|++||
T Consensus 166 ~~h~-~~V-~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 166 RAHA-AQV-TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp CCCS-SCE-EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred cCcC-Cce-EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 2222 122 11111 22222 35778888885 45788888888888888
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCcEE
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~~y 192 (358)
+++++++.++.+|...+ ++|+|+|++. +|+| .| +|+|||..+|+.+
T Consensus 244 ~~~~~~~~~~~~h~~~v-----------------~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 244 TKSTSCVLSSAVHSQCV-----------------TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp SCC--CCEEEECCSSCE-----------------EEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CCCCcEEEEEcCCCCCE-----------------EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 88888888888877776 8899999985 6775 47 9999999998744
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-18 Score=163.87 Aligned_cols=156 Identities=17% Similarity=0.225 Sum_probs=114.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.++.++|.|+++..|+-... ++++.+. ++..+.+++|+|||++| ++|+.++.|++||+.+.....
T Consensus 93 ~~l~s~s~D~~i~lWd~~~~-------------~~~~~~~~~~~~~~~~~~spdg~~l-~~g~~dg~v~i~~~~~~~~~~ 158 (321)
T 3ow8_A 93 PIAASSSLDAHIRLWDLENG-------------KQIKSIDAGPVDAWTLAFSPDSQYL-ATGTHVGKVNIFGVESGKKEY 158 (321)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCTTCCCCEEECTTSSEE-EEECTTSEEEEEETTTCSEEE
T ss_pred CEEEEEeCCCcEEEEECCCC-------------CEEEEEeCCCccEEEEEECCCCCEE-EEEcCCCcEEEEEcCCCceeE
Confidence 46788999999999993222 1233343 56778999999999987 678889999999998754332
Q ss_pred eeeccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
........+....++||.. ..|++++|+|++++|++|+.||+|++||++++
T Consensus 159 ~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred EecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 2111111222222222221 56888888888888888888888888888888
Q ss_pred ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 134 VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.++.+|...+ .+++|+|++.+|+| .| +|+|||+.+++
T Consensus 239 ~~~~~~~~h~~~v-----------------~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 239 NLAGTLSGHASWV-----------------LNVAFCPDDTHFVSSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp CEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ceeEEEcCCCCce-----------------EEEEECCCCCEEEEEeCCCcEEEEeCCCCE
Confidence 8888888777666 78999999999997 46 99999999987
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-18 Score=162.40 Aligned_cols=158 Identities=16% Similarity=0.057 Sum_probs=119.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|.-.. .+.++...++ |...|.+++|+|++.++ +||+.|++|+|||+.+.....
T Consensus 49 ~~l~tgs~D~~v~vW~~~~-----------~~~~~~~~l~gh~~~v~~~~~~~~~~~l-~s~s~D~~i~lWd~~~~~~~~ 116 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRD-----------ERLDLQWSLEGHQLGVVSVDISHTLPIA-ASSSLDAHIRLWDLENGKQIK 116 (321)
T ss_dssp CEEEEEETTSCEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCEEEEECCC-----------CCeeeeeeeccCCCCEEEEEECCCCCEE-EEEeCCCcEEEEECCCCCEEE
Confidence 3788999999999998321 1234444554 78899999999999965 678899999999998653221
Q ss_pred eeeccCceEEEEEeecCC-----------------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 83 ERCFDSEVVTFEILSDDY-----------------------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~-----------------------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
.-......+....++||. ...|.+++|+|++.+||+|+.||+|++||++++
T Consensus 117 ~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 117 SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp EEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 111000001111112221 156899999999999999999999999999999
Q ss_pred ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 134 VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+.++.+|..++ .+|+|+|++++|+| .| +|+|||+.+++
T Consensus 197 ~~~~~~~~h~~~v-----------------~~l~~spd~~~l~s~s~dg~i~iwd~~~~~ 239 (321)
T 3ow8_A 197 KLLHTLEGHAMPI-----------------RSLTFSPDSQLLVTASDDGYIKIYDVQHAN 239 (321)
T ss_dssp EEEEEECCCSSCC-----------------CEEEECTTSCEEEEECTTSCEEEEETTTCC
T ss_pred cEEEEEcccCCce-----------------eEEEEcCCCCEEEEEcCCCeEEEEECCCcc
Confidence 9999999888776 78999999999997 46 99999999887
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-17 Score=158.37 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=119.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+++|.|+++..|+-... ++++.| .|...|.+++|+|+|++| ++|+.|++|+|||+....+..
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATG-------------ETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLAT 143 (319)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEE
T ss_pred CEEEEEeCCCEEEEEECCCC-------------CeeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEE
Confidence 58899999999999993222 234455 478899999999999976 678899999999997543221
Q ss_pred -eeeccCceEE---------------EEEeecC-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 83 -ERCFDSEVVT---------------FEILSDD-------------------YSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 83 -~r~~d~e~v~---------------f~~LS~D-------------------~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
..|. ..+.. +...+.| +...|++++|+|++.+|++|+.||+|++
T Consensus 144 ~~~h~-~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 144 LLGHN-DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ECCCS-SCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EeccC-CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 1111 11111 1111122 3368999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccc---cc------------------cC--------CCc--eeeEEcCCCCEEE
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKE---GK------------------AS--------SDE--SSEEEEEEEEEEE 176 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~---Gt------------------Rs--------~~P--~sI~fs~d~~~ll 176 (358)
||+++++++.++..+.......|++++.. ++ +. ..+ .+|+|+|+|++|+
T Consensus 223 wd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 302 (319)
T 3frx_A 223 WNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLF 302 (319)
T ss_dssp EETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEE
T ss_pred EECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEE
Confidence 99999999988876543322334444311 00 10 011 6889999999998
Q ss_pred E--ec-ceEEEECCCC
Q psy2085 177 S--SD-DDQAWTKEIK 189 (358)
Q Consensus 177 S--aD-~IKIWD~~tG 189 (358)
| .| +|+|||+.|+
T Consensus 303 sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 303 AGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEETTSCEEEEEEEEC
T ss_pred EeecCceEEEEEEeec
Confidence 6 46 9999998765
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-17 Score=158.94 Aligned_cols=147 Identities=14% Similarity=0.180 Sum_probs=107.2
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--F 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~ 82 (358)
.++++.|+++..|+-... +++..|. |.+.|.+++|+|+|++| ++|+.|++|++||+.+.... +
T Consensus 157 l~s~s~d~~i~~wd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~sg~~d~~v~~wd~~~~~~~~~~ 222 (340)
T 1got_B 157 IVTSSGDTTCALWDIETG-------------QQTTTFTGHTGDVMSLSLAPDTRLF-VSGACDASAKLWDVREGMCRQTF 222 (340)
T ss_dssp EEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEEECCCcEEEEECCCC-------------cEEEEEcCCCCceEEEEECCCCCEE-EEEeCCCcEEEEECCCCeeEEEE
Confidence 567889999999983222 2344453 77889999999999976 67888999999999875432 2
Q ss_pred eeeccCceEEEEEeecCCC-------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEVVTFEILSDDYS-------------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-------------------------------~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
..|. ..+....++|+.. ..|++++|+|++.+|++|+.||+|++||++
T Consensus 223 ~~h~--~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 223 TGHE--SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp CCCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cCCc--CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 1221 1122222222211 357888888888888888888888888888
Q ss_pred CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 132 MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 132 s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
++.++.++.+|...+ .+|+|+|+|.+|+| .| +|+|||
T Consensus 301 ~~~~~~~~~~h~~~v-----------------~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 301 KADRAGVLAGHDNRV-----------------SCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TCCEEEEEECCSSCE-----------------EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCcEeeEeecCCCcE-----------------EEEEEcCCCCEEEEEcCCccEEecC
Confidence 888888888777766 88999999999997 47 999997
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.79 E-value=4.1e-18 Score=159.75 Aligned_cols=136 Identities=15% Similarity=0.231 Sum_probs=98.7
Q ss_pred eeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccCceEEEEEee----------cC----
Q psy2085 36 IELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDSEVVTFEILS----------DD---- 99 (358)
Q Consensus 36 Ieliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~e~v~f~~LS----------~D---- 99 (358)
+++.+.|. |.+.|++|+|||||++| +||+.|++|+|||+.+...... ...... +....++ .|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l-~s~~~dg~v~lWd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWV-LTTLYSGRVELWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETTSEEE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCceeEEeeccCCc-EEEEEEeCCCCEEEEECCCCEEE
Confidence 34555664 78899999999999987 5678999999999987532211 111111 2111111 12
Q ss_pred ---------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 100 ---------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 100 ---------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.+.|++|+|+|++.+|++|+.||+|++||++++. ....+.+|...+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v----------------- 143 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV----------------- 143 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE-----------------
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE-----------------
Confidence 12678999999999999999999999999988774 456677777766
Q ss_pred eeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+| ++..|+| .| +|+|||+.++.
T Consensus 144 ~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp EEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 8899999 5678886 47 99999998765
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-17 Score=152.69 Aligned_cols=177 Identities=16% Similarity=0.117 Sum_probs=115.5
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..++|.|+++..|+ ..... ....+++.+ .|...|.+++|+|||++| ++|+.|+.|++|+.......
T Consensus 52 ~~l~S~s~D~~i~vWd~~~~~~---------~~~~~~~~l~~h~~~V~~~~~s~dg~~l-~s~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 52 DMILSASRDKTIIMWKLTRDET---------NYGIPQRALRGHSHFVSDVVISSDGQFA-LSGSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp TEEEEEETTSCEEEEEECCSSS---------CSEEEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEcCCCeEEEEECCCCCc---------ccceeeEEEeCCCCCEEEEEECCCCCEE-EEEcccccceEEeeccccee
Confidence 5889999999999999 32211 112234444 377899999999999987 56778889999988753221
Q ss_pred eeeeccC-------------------------------------------ceEEEEEee------------cCC------
Q psy2085 82 FERCFDS-------------------------------------------EVVTFEILS------------DDY------ 100 (358)
Q Consensus 82 ~~r~~d~-------------------------------------------e~v~f~~LS------------~D~------ 100 (358)
....... ..+....++ .|.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 1100000 000001111 111
Q ss_pred -------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc------cc---
Q psy2085 101 -------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE------GK--- 158 (358)
Q Consensus 101 -------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~------Gt--- 158 (358)
.+.|++|+|+|++++|++|+.||+|++||+++.+++..+..+.......+..++.. |+
T Consensus 202 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~i 281 (340)
T 4aow_A 202 LANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKI 281 (340)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEE
T ss_pred CCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEE
Confidence 16799999999999999999999999999999999988876543222222222110 11
Q ss_pred ------------c----------CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 159 ------------A----------SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 159 ------------R----------s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
. ...+ ++|+|+|+|++|+| .| +|+|||+.+|+
T Consensus 282 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 282 WDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 0 0111 78999999999987 46 99999999884
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-17 Score=158.18 Aligned_cols=154 Identities=12% Similarity=0.135 Sum_probs=117.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--e
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--M 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--l 80 (358)
.|..++|.|+++..|+.... +.++.+. +...|.+++|+|+|++| ++|+.++.|+|||+.+.. .
T Consensus 68 ~~l~s~s~Dg~v~iWd~~~~-------------~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~d~~v~iw~~~~~~~~~ 133 (340)
T 1got_B 68 RLLLSASQDGKLIIWDSYTT-------------NKVHAIPLRSSWVMTCAYAPSGNYV-ACGGLDNICSIYNLKTREGNV 133 (340)
T ss_dssp SEEEEEETTTEEEEEETTTC-------------CEEEEEECSSSCEEEEEECTTSSEE-EEEETTCEEEEEETTTCSBSC
T ss_pred CEEEEEeCCCcEEEEECCCC-------------CcceEeecCCccEEEEEECCCCCEE-EEEeCCCeEEEEECccCCCcc
Confidence 47889999999999983222 1233333 66789999999999987 677889999999997532 1
Q ss_pred ee----eeeccCceEEEEE---------eecC-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 81 KF----ERCFDSEVVTFEI---------LSDD-------------------YSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 81 k~----~r~~d~e~v~f~~---------LS~D-------------------~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
+. ..|. . .+..+. .+.| +.+.|++++|+|++.+|++|+.||+|++|
T Consensus 134 ~~~~~~~~h~-~-~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 134 RVSRELAGHT-G-YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp EEEEEEECCS-S-CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eeEEEecCCC-c-cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 11 1121 1 121111 1122 22679999999999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++++.++.++.+|...+ .+|+|+|++..|+| .| +|+|||+.+++
T Consensus 212 d~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 212 DVREGMCRQTFTGHESDI-----------------NAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp ETTTCSEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ECCCCeeEEEEcCCcCCE-----------------EEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 999999999999888777 88999999999997 46 99999999877
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=8.2e-18 Score=162.31 Aligned_cols=155 Identities=8% Similarity=-0.008 Sum_probs=114.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+-... ++++.|. |...|++++|+|+|..++++|+.|++|+|||+.+.....
T Consensus 140 ~~l~sgs~d~~i~iwd~~~~-------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 140 TQAVSGSKDICIKVWDLAQQ-------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceee
Confidence 47889999999999983222 3455564 788999999999998888899999999999998643221
Q ss_pred --eeeccCceEEEEEee-----------cC-------------------CCCCeeEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy2085 83 --ERCFDSEVVTFEILS-----------DD-------------------YSSELNSIAINPVH-QLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 --~r~~d~e~v~f~~LS-----------~D-------------------~s~~In~i~~np~~-~llasGs~DGtV~iWD 129 (358)
..+.....+....++ .| +...|++|+|+|++ .+||+|+.||+|++||
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 111111111111111 12 11789999999997 6899999999999999
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE-EE--ec-ceEEEECCCC
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE-ES--SD-DDQAWTKEIK 189 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l-lS--aD-~IKIWD~~tG 189 (358)
+++++.+ .+.+|...| ++|+|||++..| +| .| +|++|++.+.
T Consensus 287 ~~~~~~~-~~~~H~~~V-----------------~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 287 SSLSELF-RSQAHRDFV-----------------RDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TTCCEEE-EECCCSSCE-----------------EEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCcEE-EEcCCCCCE-----------------EEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 9988754 567888777 889999998754 45 48 9999999865
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.78 E-value=1.4e-17 Score=163.29 Aligned_cols=154 Identities=16% Similarity=0.131 Sum_probs=111.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.+..++|.|+++..|+.... ++++.+ .|...|++++|+|+|++| ++|+.|++|++||+.+....
T Consensus 163 ~~l~sgs~D~~i~iwd~~~~-------------~~~~~~~~h~~~V~~v~~~p~~~~l-~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDFQGF-------------ECIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp SEEEEEETTSCCCEEETTSS-------------CEEECCCCCSSCEEEEEECSSSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------ceeEEEcCCCCCEEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47889999999999983221 234444 367889999999999987 57789999999999865321
Q ss_pred -eeeeccCceEEEEEeec----------C-------------------CCCCeeEEEEcCC-------------------
Q psy2085 82 -FERCFDSEVVTFEILSD----------D-------------------YSSELNSIAINPV------------------- 112 (358)
Q Consensus 82 -~~r~~d~e~v~f~~LS~----------D-------------------~s~~In~i~~np~------------------- 112 (358)
+..|. ..+....+++ | +...|++++|+|+
T Consensus 229 ~~~~h~--~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 1vyh_C 229 TFTGHR--EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK 306 (410)
T ss_dssp EEECCS--SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred EEeCCC--ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCC
Confidence 22221 1111111111 1 1156788888875
Q ss_pred -CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 113 -HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 113 -~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
+.+|++|+.||+|++||++++.++.++.+|...+ .+|.|+|+|.+|+| .| +|+|||..+
T Consensus 307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v-----------------~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV-----------------RGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----------------EEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE-----------------EEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 5578888888888888888888888887777665 78999999999997 46 999999988
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 370 ~~ 371 (410)
T 1vyh_C 370 KR 371 (410)
T ss_dssp SC
T ss_pred Cc
Confidence 77
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-17 Score=155.13 Aligned_cols=163 Identities=12% Similarity=0.152 Sum_probs=103.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|. ..... .--..++.| .|...|++++|+|||++| +||+.|++|+|||+.+....
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~---------~~~~~~~~~~~h~~~v~~~~~s~dg~~l-~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQ---------KFGVPVRSFKGHSHIVQDCTLTADGAYA-LSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETT---------EEEEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred cEEEEecCCccEEEecCCCCCc---------cccccceEEeCCcccEEEEEECCCCCEE-EEEeCCCEEEEEECCCCCee
Confidence 5789999999999999 32110 011234455 378899999999999987 57789999999999875321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--------CCCcc-------
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--------AFNCI------- 146 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--------~~~~v------- 146 (358)
. .. ..+...|++++|+|++.+|++|+.||+|++||++.+ ++.++.+ ...+.
T Consensus 101 ~--~~-----------~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 101 Q--RF-----------VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp E--EE-----------ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECCC------C
T ss_pred E--EE-----------ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 1 00 112256777777777777777777777777777533 3322210 00000
Q ss_pred --ccccCCCccc-------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 147 --SNERDTEEKE-------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 147 --~~~~~i~gl~-------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
-...+.++.. +. .+..+ .+++|+|+|++|+| .| +|+|||+.+++
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~ 229 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 0000001100 00 11112 88999999999997 46 99999999887
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.8e-17 Score=159.68 Aligned_cols=154 Identities=7% Similarity=0.016 Sum_probs=112.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++++..|+...+ ++++.|. |...|++|+|+|++..++++|+.+++|+|||+.+.....
T Consensus 152 ~~l~sgs~dg~v~iwd~~~~-------------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 152 TQAVSGGKDFSVKVWDLSQK-------------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee
Confidence 47889999999999983222 2444554 778899999999998777888899999999997643221
Q ss_pred e--eeccCceEEEEEeecC-----------CC-------------------CCeeEEEEcCCC-CEEEEEeCCCeEEEEe
Q psy2085 83 E--RCFDSEVVTFEILSDD-----------YS-------------------SELNSIAINPVH-QLICVGTIEGKVEAWD 129 (358)
Q Consensus 83 ~--r~~d~e~v~f~~LS~D-----------~s-------------------~~In~i~~np~~-~llasGs~DGtV~iWD 129 (358)
. .+.....+....++|+ .. ..|++|+|+|++ .+||+|+.||+|++||
T Consensus 219 ~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd 298 (357)
T 4g56_B 219 RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLD 298 (357)
T ss_dssp BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEE
Confidence 1 1111111222222222 11 679999999986 5899999999999999
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCC
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~t 188 (358)
+++++.+..+ +|...| ++|+||| ++.+|+| .| +|+|||+.+
T Consensus 299 ~~~~~~~~~~-~H~~~V-----------------~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 299 ADFSEVFRDL-SHRDFV-----------------TGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TTSCEEEEEC-CCSSCE-----------------EEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred CCCCcEeEEC-CCCCCE-----------------EEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 9998877665 576666 8899998 7888886 47 999999865
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-17 Score=158.68 Aligned_cols=139 Identities=19% Similarity=0.210 Sum_probs=112.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+.++++.|+.+..|+-... ++++.|. |...|++++|+|+|++| ++|+.|++|+|||+.......
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSG-------------QCVQAFETHESDVNSVRYYPSGDAF-ASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp CEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEecCCCCCeEEEEEeCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47899999999999993222 2344554 77889999999999976 678899999999998642110
Q ss_pred eeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 83 ERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.+. ......+++++|+|++.+|++|+.||+|++||++++.++..+.+|...+
T Consensus 277 ------------~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v--------------- 329 (354)
T 2pbi_B 277 ------------IYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV--------------- 329 (354)
T ss_dssp ------------EECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE---------------
T ss_pred ------------EEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE---------------
Confidence 111 1111468999999999999999999999999999999999999998877
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+|+|++|+| .| +|+||+
T Consensus 330 --~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 330 --STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp --EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred --EEEEECCCCCEEEEEcCCCCEEecC
Confidence 88999999999997 46 999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-17 Score=158.78 Aligned_cols=129 Identities=15% Similarity=0.183 Sum_probs=105.2
Q ss_pred cceeEEEEee-CCC-CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 34 RRIELIQDFE-MPG-VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 34 ~rIeliqdfe-~~~-~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
..+++++.+. |+. .|.+++|||||++| +||+.|++|+|||+.+..... ...+...+...|++|+|+|
T Consensus 3 ~~~~~~~~~~~h~~~~v~~l~~sp~g~~l-as~~~D~~i~iw~~~~~~~~~----------~~~~~~~h~~~v~~~~~sp 71 (345)
T 3fm0_A 3 DSLVLLGRVPAHPDSRCWFLAWNPAGTLL-ASCGGDRRIRIWGTEGDSWIC----------KSVLSEGHQRTVRKVAWSP 71 (345)
T ss_dssp -CEEEEEEECCSTTSCEEEEEECTTSSCE-EEEETTSCEEEEEEETTEEEE----------EEEECSSCSSCEEEEEECT
T ss_pred ccEEEeeeecCCCCCcEEEEEECCCCCEE-EEEcCCCeEEEEEcCCCccee----------eeeeccccCCcEEEEEECC
Confidence 3567888885 777 89999999999976 678899999999987643211 1123345557899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
++++||+|+.||+|++||..++. ++.++.+|...+ .+|+|+|++++|+| .| +|+|||+
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v-----------------~~v~~sp~~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEV-----------------KSVAWAPSGNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCc-----------------eEEEEeCCCCEEEEEECCCeEEEEEC
Confidence 99999999999999999998774 578888888877 88999999999997 47 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.++.
T Consensus 135 ~~~~ 138 (345)
T 3fm0_A 135 DEED 138 (345)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 8764
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.6e-17 Score=157.64 Aligned_cols=161 Identities=13% Similarity=0.089 Sum_probs=110.4
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.+.++.++++..|+-..++.+. +.......|...|++|+|+|||++| ++|+.+++|+|||+.+........
T Consensus 108 ~l~~s~dg~v~lWd~~~~~~~~--------~~~~~~~~h~~~V~~v~~spdg~~l-~sgs~dg~v~iwd~~~~~~~~~~~ 178 (357)
T 4g56_B 108 ILVASDSGAVELWEILEKESLL--------VNKFAKYEHDDIVKTLSVFSDGTQA-VSGGKDFSVKVWDLSQKAVLKSYN 178 (357)
T ss_dssp EEEEETTSCEEEC--------C--------CCCEEECCCSSCEEEEEECSSSSEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCEEEEeeccccceeE--------EEeeccCCCCCCEEEEEECCCCCEE-EEEeCCCeEEEEECCCCcEEEEEc
Confidence 4577889999999822221110 1112334678899999999999987 677899999999998754322111
Q ss_pred ccCceEEEEEeec-----------CCC---------------------CCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCC
Q psy2085 86 FDSEVVTFEILSD-----------DYS---------------------SELNSIAINPV-HQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 86 ~d~e~v~f~~LS~-----------D~s---------------------~~In~i~~np~-~~llasGs~DGtV~iWD~Rs 132 (358)
.....+....+++ |.+ ..|++|+|+|+ +.+||+|+.||+|++||+++
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 1111122222222 211 45888889887 46888888899999999988
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCcEE
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKKTY 192 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~~y 192 (358)
++++.++.++...+ ++|+|+|++. +|+| .| +|+|||.++|+.+
T Consensus 259 ~~~~~~~~~~~~~v-----------------~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 259 PDSAQTSAVHSQNI-----------------TGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp GGGCEEECCCSSCE-----------------EEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred CcEeEEEeccceeE-----------------EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 88888888877766 8899999875 5765 47 9999999998844
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.9e-17 Score=162.33 Aligned_cols=142 Identities=9% Similarity=0.160 Sum_probs=116.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|+ +... +++.+. |...|++++|+|+|++| ++|+.|++|+|||+.+....
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l~~h~~~V~~v~~~~~~~~l-~sgs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISFDHSGKLL-ASCSADMTIKLWDFQGFECI 185 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTSCCCEEETTSSCEE
T ss_pred CEEEEEeCCCeEEEEECCCCc--------------EEEEEeccCCcEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcee
Confidence 4788999999999999 3221 223333 67889999999999976 67889999999999864321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+.. ..+...|++++|+|++.+|++|+.||+|++||++++.++.++.+|...+
T Consensus 186 --~~~-----------~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v--------------- 237 (410)
T 1vyh_C 186 --RTM-----------HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV--------------- 237 (410)
T ss_dssp --ECC-----------CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE---------------
T ss_pred --EEE-----------cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccE---------------
Confidence 111 1233689999999999999999999999999999999999999988776
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+|++.+|+| .| +|+|||+.+++
T Consensus 238 --~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 238 --RMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp --EEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred --EEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 78999999999997 47 99999999887
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.7e-17 Score=156.17 Aligned_cols=150 Identities=15% Similarity=0.173 Sum_probs=111.1
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-- 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-- 79 (358)
.+..++|.|+++..|+ +.... -....++++.+. |...|++++|+|||++| +||+.|++|+|||+.+..
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~-------~~~~~~~~~~~~~h~~~V~~v~~sp~g~~l-as~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESAD-------RTFEMDLLAIIEGHENEVKGVAWSNDGYYL-ATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp SEEEEEETTSCEEEEEC--------------CCCEEEEEEC----CEEEEEECTTSCEE-EEEETTSCEEEEECCTTCCC
T ss_pred CEEEEEeCCCcEEEEEcccCcC-------ccccceeEEEEcCCCCcEEEEEECCCCCEE-EEEeCCCEEEEEeccCCCCC
Confidence 4678999999999998 32110 001234555554 78899999999999987 678899999999995321
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ceeEEEeCCCCccccccCCCcccc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK--VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~--~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
.++.. .+ ..+...|++|+|+|++.+|++|+.||+|++||++++ .++.++.+|...+
T Consensus 143 ~~~~~----------~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v----------- 200 (330)
T 2hes_X 143 YECIS----------VL-QEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV----------- 200 (330)
T ss_dssp CEEEE----------EE-CCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE-----------
T ss_pred eEEEE----------Ee-ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcE-----------
Confidence 11111 11 233468999999999999999999999999999877 6788999888877
Q ss_pred ccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG 189 (358)
.++.|+|+ +..|+| .| +|+|||+.++
T Consensus 201 ------~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 201 ------WSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ------EEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ------EEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 88999998 667876 47 9999998754
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=155.81 Aligned_cols=123 Identities=9% Similarity=0.020 Sum_probs=99.0
Q ss_pred EEEEee--CCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 38 LIQDFE--MPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 38 liqdfe--~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
+++.+. +.+.|.+++|+| +|++| ++|+.|++|++||+.+..... .........|++++|+|++
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l-~s~s~dg~i~~wd~~~~~~~~------------~~~~~~~~~i~~~~~~pdg 182 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYF-IWADNRGTIGFQSYEDDSQYI------------VHSAKSDVEYSSGVLHKDS 182 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEE-EEEETTCCEEEEESSSSCEEE------------EECCCSSCCCCEEEECTTS
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEE-EEEeCCCcEEEEECCCCcEEE------------EEecCCCCceEEEEECCCC
Confidence 344554 446799999999 99987 577889999999998654311 1111112469999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCcee-EEEeC-CCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCC
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKA-GTLDC-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i-~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG 189 (358)
.+||+|+.||+|++||+++++.+ .++.. |..++ .+|+|+|+|.+|++ +| +|+|||++++
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-----------------~~l~fs~~g~~l~s~~~~~v~iwd~~~~ 245 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKI-----------------KEVKFADNGYWMVVECDQTVVCFDLRKD 245 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCE-----------------EEEEECTTSSEEEEEESSBEEEEETTSS
T ss_pred CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCE-----------------EEEEEeCCCCEEEEEeCCeEEEEEcCCC
Confidence 99999999999999999999988 88887 77776 88999999999997 57 9999999987
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 246 ~ 246 (343)
T 3lrv_A 246 V 246 (343)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.6e-17 Score=159.27 Aligned_cols=147 Identities=18% Similarity=0.186 Sum_probs=113.2
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..+++.|+++..|+ ....+ .++.+ .|.+.|++|+|+|||++| +||+.|++|+|||+.+....
T Consensus 219 ~~l~sgs~D~~v~~wd~~~~~~-------------~~~~~~~h~~~v~~v~~~p~~~~l-~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 219 NMFISGSCDTTVRLWDLRITSR-------------AVRTYHGHEGDINSVKFFPDGQRF-GTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CEEEEEETTSCEEEEETTTTCC-------------CCEEECCCSSCCCEEEECTTSSEE-EEECSSSCEEEEETTTTEEE
T ss_pred CEEEEEECCCeEEEEECCCCCc-------------ceEEECCcCCCeEEEEEecCCCeE-EEEcCCCeEEEEECCCCcEE
Confidence 4778999999999999 33221 22333 477889999999999976 67889999999999875321
Q ss_pred e--eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE----eCCCCccccccCCCcc
Q psy2085 82 F--ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL----DCAFNCISNERDTEEK 155 (358)
Q Consensus 82 ~--~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L----~~~~~~v~~~~~i~gl 155 (358)
. ..+.+. .+.....|++++|+|++.+|++|+.||+|++||+.+++.+..+ .+|...|
T Consensus 285 ~~~~~~~~~--------~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v--------- 347 (380)
T 3iz6_a 285 QVYNREPDR--------NDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRI--------- 347 (380)
T ss_dssp EEECCCCSS--------SCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCC---------
T ss_pred EEecccccc--------cccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCce---------
Confidence 1 111100 0111145899999999999999999999999999999988877 4565555
Q ss_pred ccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 156 EGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|+|.+|+| .| +|+|||+..+
T Consensus 348 --------~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 348 --------SCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp --------CEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred --------EEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 78999999999997 47 9999999764
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-17 Score=154.58 Aligned_cols=150 Identities=12% Similarity=0.144 Sum_probs=108.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe--e-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF--E-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf--e-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
+..+++.|+++..|+-... ...+++.+ . |...|++|+|+|+|++| ++|+.|++|+|||+......
T Consensus 26 ~las~~~D~~i~lw~~~~~-----------~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD-----------DFTLIDVLDETAHKKAIRSVAWRPHTSLL-AAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp EEEEEESSSCEEEEECSSS-----------CCEEEEEECTTCCCSCEEEEEECTTSSEE-EEEETTSCEEEEEC------
T ss_pred EEEEEcCCCEEEEEEecCC-----------CeEEEEEEecCCccCCEEEEEECCCCCEE-EEEeCCCcEEEEEcccCcCc
Confidence 6788999999999983211 11334444 2 77899999999999976 67889999999998642100
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC----ceeEEEeCCCCccccccCCCcccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMK----VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~----~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
...... ...+ ..+...|++|+|+|++++||+|+.||+|++||++.. +++.++.+|...+
T Consensus 94 ---~~~~~~--~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v----------- 156 (330)
T 2hes_X 94 ---TFEMDL--LAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV----------- 156 (330)
T ss_dssp ----CCCEE--EEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE-----------
T ss_pred ---ccccee--EEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce-----------
Confidence 000000 0111 234478999999999999999999999999999532 4577888887776
Q ss_pred ccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|.|+|++.+|+| .| +|+|||..++
T Consensus 157 ------~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 157 ------KHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ------EEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred ------EEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 88999999999997 47 9999998776
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.8e-17 Score=156.94 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=112.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.|+++..|+ +.... .......-.|...|++++|||||++| ++|+.|++|+|||+.....++
T Consensus 29 ~~las~~~D~~i~iw~~~~~~~----------~~~~~~~~~h~~~v~~~~~sp~g~~l-~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDSW----------ICKSVLSEGHQRTVRKVAWSPCGNYL-ASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEE----------EEEEEECSSCSSCEEEEEECTTSSEE-EEEETTSCEEEEEECCC-EEE
T ss_pred CEEEEEcCCCeEEEEEcCCCcc----------eeeeeeccccCCcEEEEEECCCCCEE-EEEECCCcEEEEEccCCCeEE
Confidence 4677899999999998 32210 00111112477899999999999987 678899999999987654322
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeEEEeCCCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV---KAGTLDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~---~i~~L~~~~~~v~~~~~i~gl~GtR 159 (358)
...+ ..+...|++|+|+|++++|++|+.||+|++||++++. ++..+..|...+
T Consensus 98 ~~~~-----------~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v------------- 153 (345)
T 3fm0_A 98 VTTL-----------EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV------------- 153 (345)
T ss_dssp EEEE-----------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE-------------
T ss_pred EEEc-----------cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe-------------
Confidence 1111 2334789999999999999999999999999998774 456777777766
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| +|+|||..+++
T Consensus 154 ----~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 154 ----KHVVWHPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp ----EEEEECSSSSCEEEEETTSCEEEEEEETTE
T ss_pred ----EEEEECCCCCEEEEEeCCCcEEEEEecCCC
Confidence 78999999999987 46 99999998765
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-16 Score=147.30 Aligned_cols=63 Identities=14% Similarity=0.199 Sum_probs=46.1
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
++.++.|+++..|+...+ +.+.+++--.|...|++|+|+|+|++| +||+.|++|+|||+.+..
T Consensus 38 ~lAvg~D~tV~iWd~~tg----------~~~~~~~~~~~~~~V~~v~~~~~~~~l-~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 38 VLAVALDNSVYLWSASSG----------DILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EEEEEETTEEEEEETTTC----------CEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSEEEEEETTTTE
T ss_pred EEEEEeCCEEEEEECCCC----------CEEEEEEecCCCCeEEEEEECCCCCEE-EEEECCCcEEEeecCCce
Confidence 356677899999983322 112333333466789999999999987 678899999999998653
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-16 Score=148.50 Aligned_cols=143 Identities=15% Similarity=0.132 Sum_probs=115.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+.+..|..... ++++.+ .|...|.+++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDG-------------KFEKTISGHKLGISDVAWSSDSNLL-VSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEeeCCCeEEEEeCCCc-------------ccchhhccCCCceEEEEEcCCCCEE-EEECCCCEEEEEECCCCcEEE
Confidence 46788899999999983211 122333 477889999999999977 567789999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.. ..+...|.+++|+|++++|++|+.||+|++||+++++++..+..|..++
T Consensus 102 --~~-----------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v---------------- 152 (312)
T 4ery_A 102 --TL-----------KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPV---------------- 152 (312)
T ss_dssp --EE-----------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCE----------------
T ss_pred --EE-----------cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcE----------------
Confidence 10 1223679999999999999999999999999999999999998887776
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| .|+|||+.+++
T Consensus 153 -~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 153 -SAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp -EEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred -EEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 78999999999986 46 99999999887
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.75 E-value=4.1e-16 Score=148.32 Aligned_cols=108 Identities=11% Similarity=0.096 Sum_probs=73.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|+-....... ..-.++..+ .|...|++++|+|+|.+| +||+.|++|+|||+.+.....
T Consensus 40 ~~l~sgs~D~~v~iWd~~~~~~~~------~~~~~~~~l~~h~~~V~~~~~~~~~~~l-~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 40 PVLISGSRDKTVMIWKLYEEEQNG------YFGIPHKALTGHNHFVSDLALSQENCFA-ISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp CEEEEEETTSCEEEEEECSSCCSS------BSEEEEEEECCCSSCEEEEEECSSTTEE-EEEETTSEEEEEETTSSCEEE
T ss_pred CEEEEEcCCCEEEEEECCcCCccc------ccccccchhccCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCcEEE
Confidence 478999999999999932111100 011233444 478899999999999976 578899999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~R 131 (358)
. . ..+...|++|+|+|++.+|++|+.||+|++||++
T Consensus 113 ~--~-----------~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 113 R--F-----------VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp E--E-----------ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred E--E-----------cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 0 0 1122567777777777777777777777777765
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-16 Score=165.18 Aligned_cols=158 Identities=15% Similarity=0.131 Sum_probs=113.9
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+..++|.|+++..|. ...... + -...+.+ .|...|++|+|||||++| +||+.|++|+|||+.+....
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~------~---~~~~~~~~~h~~~v~~v~~s~~g~~l-~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKA------Y---GVAQRRLTGHSHFVEDVVLSSDGQFA-LSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTC------S---CEEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred CEEEEEeCCCcEEEEEccCCCcc------c---ccccceecCCCCcEEEEEECCCCCEE-EEEeCCCcEEEEECCCCcce
Confidence 4788999999999998 322111 0 0122233 488899999999999987 67889999999999875332
Q ss_pred --eeeeccCceEEEEEeecCCC--------------------------------CCeeEEEEcCCC--CEEEEEeCCCeE
Q psy2085 82 --FERCFDSEVVTFEILSDDYS--------------------------------SELNSIAINPVH--QLICVGTIEGKV 125 (358)
Q Consensus 82 --~~r~~d~e~v~f~~LS~D~s--------------------------------~~In~i~~np~~--~llasGs~DGtV 125 (358)
+..|. .. |..+.++++.. ..|++++|+|++ .+|++|+.||+|
T Consensus 466 ~~~~~h~-~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v 543 (694)
T 3dm0_A 466 RRFVGHT-KD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 543 (694)
T ss_dssp EEEECCS-SC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred eEEeCCC-CC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeE
Confidence 22222 22 22222222211 347888888875 578888888888
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++||+++++++.++.+|...+ .+|+|+|++++|+| .| +|+|||+.+|+
T Consensus 544 ~vwd~~~~~~~~~~~~h~~~v-----------------~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 544 KVWNLSNCKLRSTLAGHTGYV-----------------STVAVSPDGSLCASGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp EEEETTTCCEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSBCEEEETTTTE
T ss_pred EEEECCCCcEEEEEcCCCCCE-----------------EEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 888888888888888777666 88999999999997 46 99999999988
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.8e-16 Score=145.67 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=111.1
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-.|.++++.|+.+..|+-..... ....++.+++..+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+..
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQE----ECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL-ACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSC----TTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTCEEEEEECSSTT
T ss_pred CCEEEEEcCCCeEEEEecCCCcc----cccccCcceeeeecccCCceeEEEEcCCCCCcEE-EEecCCCcEEEecCCChH
Confidence 35889999999999999322211 11223445666664 7889999999999 9876 567789999999987542
Q ss_pred ee--ee--ee---------ccCceEEE----------------------------------EEeecCCCCCeeEEEEcCC
Q psy2085 80 MK--FE--RC---------FDSEVVTF----------------------------------EILSDDYSSELNSIAINPV 112 (358)
Q Consensus 80 lk--~~--r~---------~d~e~v~f----------------------------------~~LS~D~s~~In~i~~np~ 112 (358)
.. +. .. .....+.. ...-..+...|++++|+|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 146 DLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp CTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCC
T ss_pred HhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCC
Confidence 11 00 00 00000000 0011223478999999999
Q ss_pred C----CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-----c--cCCCcc-c--------------cc-----c-C
Q psy2085 113 H----QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-----E--RDTEEK-E--------------GK-----A-S 160 (358)
Q Consensus 113 ~----~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-----~--~~i~gl-~--------------Gt-----R-s 160 (358)
+ .+|++|+.||+|++||++++........+...... . ....+. . +. + +
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 89999999999999999886433222111100000 0 000000 0 00 0 1
Q ss_pred CCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+ .+|+|+|++++|+| .| .|+|||+.+++
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 112 89999999999997 46 99999999876
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.74 E-value=3.3e-17 Score=168.82 Aligned_cols=117 Identities=15% Similarity=0.229 Sum_probs=96.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
|...|++++|+|+|.++++||+.|++|++||+.+.. +... + ..|...|++|+|+|++++||+|+.||
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--~~~~----------l-~~H~~~V~~v~fspdg~~las~s~D~ 212 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--FKST----------F-GEHTKFVHSVRYNPDGSLFASTGGDG 212 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--EEEE----------E-CCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--Eeee----------e-ccccCceEEEEECCCCCEEEEEECCC
Confidence 567889999999988766888899999999976532 1111 1 23447899999999999999999999
Q ss_pred eEEEEeCCCCceeEEEe-------CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLD-------CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~-------~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|++||+++++++..+. +|...+ .+|+|+|+|++|+| .| +|+|||+.+|+
T Consensus 213 ~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V-----------------~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 213 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSV-----------------FGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp CEEEEETTTCCEEEECBCTTSSSCSSSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cEEEEECCCCcEeeeeccccccccccCCCE-----------------EEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 99999999999988884 566555 88999999999997 47 99999999887
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-16 Score=163.38 Aligned_cols=129 Identities=18% Similarity=0.188 Sum_probs=101.4
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeee-eeccCceEEEEEeecC--------------------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFE-RCFDSEVVTFEILSDD-------------------- 99 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~-r~~d~e~v~f~~LS~D-------------------- 99 (358)
+|...|++++|||||++| |||+.|++|+|||+.+.. ++.. ..+...+ ....++||
T Consensus 57 ~h~~~v~~~~~spdg~~l-asg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v-~~v~fs~dg~~l~~~~~~~~~~~~v~~w 134 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPV-KDISWDSESKRIAAVGEGRERFGHVFLF 134 (611)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEEEEECSSSCE-EEEEECTTSCEEEEEECCSSCSEEEEET
T ss_pred CCCCceEEEEECCCCcEE-EEEeCCCCEEEeECCCCcceeeEeecccCCce-EEEEECCCCCEEEEEECCCCceeEEEEe
Confidence 578889999999999987 788899999999986432 2211 1111222 22222222
Q ss_pred -----------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 100 -----------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 100 -----------~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
+...|++|+|+|++. +|++|+.||+|++||.++++++.++.+|...+ .+|+
T Consensus 135 d~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V-----------------~~v~ 197 (611)
T 1nr0_A 135 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV-----------------HSVR 197 (611)
T ss_dssp TTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE-----------------EEEE
T ss_pred eCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce-----------------EEEE
Confidence 236799999999986 69999999999999999999999999998877 8899
Q ss_pred EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 168 EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 168 fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|+|++|+| .| +|+|||..+|+
T Consensus 198 fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 198 YNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred ECCCCCEEEEEECCCcEEEEECCCCc
Confidence 9999999997 57 99999998876
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.74 E-value=9.3e-17 Score=149.98 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=110.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+..++|.|+++..|+....+ .+.+..+ .|...|++++|+|+ |.+| ++|+.|++|+|||+.+...
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~g~~l-~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPML-LVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSC-----------BCCCEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEEBCSSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCc-----------eEEEEEeecCCCceeEEEeCcCCCCcEE-EEEECCCcEEEEEecCCCc
Confidence 578899999999999932221 1122333 37788999999998 8766 6788999999999976421
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC-------------CCEEEEEeCCCeEEEEeCCCCc----eeEEEeCCC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV-------------HQLICVGTIEGKVEAWDPRMKV----KAGTLDCAF 143 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-------------~~llasGs~DGtV~iWD~Rs~~----~i~~L~~~~ 143 (358)
.. .. .+ ..+...|++++|+|+ +.+||+|+.||+|++||++++. .+.+|.+|.
T Consensus 136 ~~-------~~---~~-~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~ 204 (297)
T 2pm7_B 136 TS-------PI---II-DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (297)
T ss_dssp BC-------CE---EE-ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred ee-------ee---ee-ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC
Confidence 00 00 00 123367999999997 4699999999999999998876 567888888
Q ss_pred CccccccCCCccccccCCCceeeEEcCCC---CEEEE--ec-ceEEEECCCC
Q psy2085 144 NCISNERDTEEKEGKASSDESSEEEEEEE---EEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 144 ~~v~~~~~i~gl~GtRs~~P~sI~fs~d~---~~llS--aD-~IKIWD~~tG 189 (358)
..+ .+|+|+|++ .+|+| .| +|+|||..++
T Consensus 205 ~~V-----------------~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 205 DWV-----------------RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp SCE-----------------EEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred Cce-----------------EEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 777 889999985 67876 47 9999999864
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.73 E-value=2.6e-16 Score=152.94 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=108.6
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+-... +++..+ .|...|++++|+|||++| ++|+.|++|+|||+.+.....
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~-------------~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENR-------------KIVMILQGHEQDIYSLDYFPSGDKL-VSGSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp SEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEcCCCeEEEEECCCC-------------cEEEEEccCCCCEEEEEEcCCCCEE-EEecCCCcEEEEECCCCeeEE
Confidence 46788899999999983222 133344 377889999999999987 577889999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEe-------CCCCccccccCCCc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLD-------CAFNCISNERDTEE 154 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~-------~~~~~v~~~~~i~g 154 (358)
. +. +...|.+++|+| ++.+|++|+.||+|++||++++..+..+. +|...+
T Consensus 202 ~------------~~--~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v-------- 259 (393)
T 1erj_A 202 T------------LS--IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV-------- 259 (393)
T ss_dssp E------------EE--CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE--------
T ss_pred E------------EE--cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE--------
Confidence 1 11 115799999999 78999999999999999999999888773 344444
Q ss_pred cccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|+|+|+|++|+| .| +|+|||+.++.
T Consensus 260 ---------~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 260 ---------YSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp ---------EEEEECTTSSEEEEEETTSEEEEEEC----
T ss_pred ---------EEEEECCCCCEEEEEeCCCEEEEEECCCCC
Confidence 88999999999997 47 99999998653
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.73 E-value=1.7e-16 Score=150.88 Aligned_cols=134 Identities=10% Similarity=0.055 Sum_probs=106.0
Q ss_pred ccccceeEEEEee-CCCCEeEEEE-----cC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCC
Q psy2085 31 DIRRRIELIQDFE-MPGVSTSVRI-----SP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSE 103 (358)
Q Consensus 31 ~~~~rIeliqdfe-~~~~v~~v~~-----Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~ 103 (358)
+....+++++.+. |...|++|+| +| ||++| +||+.|++|+|||+.+...... .......+ ..|...
T Consensus 6 ~~~~~~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l-~sgs~D~~v~iWd~~~~~~~~~-----~~~~~~~l-~~h~~~ 78 (343)
T 2xzm_R 6 SLDIQVVKRGILEGHSDWVTSIVAGFSQKENEDSPVL-ISGSRDKTVMIWKLYEEEQNGY-----FGIPHKAL-TGHNHF 78 (343)
T ss_dssp CEEEEEEEEEEEECCSSCEEEEEECCCSSTTCCCCEE-EEEETTSCEEEEEECSSCCSSB-----SEEEEEEE-CCCSSC
T ss_pred ccceEeeeeeeeccchhhhhheeeEEEeecCCCCCEE-EEEcCCCEEEEEECCcCCcccc-----cccccchh-ccCCCc
Confidence 3445567777775 8889999999 77 89876 6788999999999975321000 00001111 234478
Q ss_pred eeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-c
Q psy2085 104 LNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 104 In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~ 180 (358)
|++++|+|++.+|++|+.||+|++||+++++++.++.+|...+ .+|+|+|++++|+| .| +
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v-----------------~~v~~sp~~~~l~s~~~d~~ 141 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEV-----------------YSVAFSPDNRQILSAGAERE 141 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCE-----------------EEEEECSSTTEEEEEETTSC
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcE-----------------EEEEECCCCCEEEEEcCCCE
Confidence 9999999999999999999999999999999999999998877 88999999999997 47 9
Q ss_pred eEEEECCC
Q psy2085 181 DQAWTKEI 188 (358)
Q Consensus 181 IKIWD~~t 188 (358)
|+|||+..
T Consensus 142 i~~wd~~~ 149 (343)
T 2xzm_R 142 IKLWNILG 149 (343)
T ss_dssp EEEEESSS
T ss_pred EEEEeccC
Confidence 99999874
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.7e-17 Score=159.99 Aligned_cols=157 Identities=9% Similarity=0.088 Sum_probs=99.1
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+..+++.|+++..|+ .... ...+++...|.+.|++|+|+| ||++| +||+.|++|+|||+....+..
T Consensus 134 ~lasGs~dg~i~lWd~~~~~-----------~~~~~~~~gH~~~V~~l~f~p~~~~~l-~s~s~D~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKD-----------KPTFIKGIGAGGSITGLKFNPLNTNQF-YASSMEGTTRLQDFKGNILRV 201 (435)
T ss_dssp CEEEEETTSCEEEECSSCCS-----------CCEEECCCSSSCCCCEEEECSSCTTEE-EEECSSSCEEEEETTSCEEEE
T ss_pred EEEEEeCCCEEEEEECCCCC-----------ceeEEEccCCCCCEEEEEEeCCCCCEE-EEEeCCCEEEEeeccCCceeE
Confidence 466888999999998 3221 112233345888999999998 67766 678899999999998654332
Q ss_pred eeeccCce-----EEE-------EEeecC------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFDSEV-----VTF-------EILSDD------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d~e~-----v~f-------~~LS~D------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~R 131 (358)
....+... +.+ ...+.| +...|++|+|+|++. +|++|+.||+|++||++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~ 281 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLR 281 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETT
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecc
Confidence 22211110 000 000111 114566666666543 56666666666666666
Q ss_pred CCceeEEE---eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 MKVKAGTL---DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s~~~i~~L---~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+......+ .+|...| ++|+|+|+|.+|+| .| +|+|||+.+++
T Consensus 282 ~~~~~~~~~~~~~h~~~v-----------------~~~~~spdg~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 282 QVRGKASFLYSLPHRHPV-----------------NAACFSPDGARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp TCCSSSCCSBCCBCSSCE-----------------EECCBCTTSSEEEEEESSSCEEEEESSSSS
T ss_pred cccccceEEEeeeccccc-----------------cceeECCCCCeeEEEcCCCEEEEEECCCCc
Confidence 55443322 2233333 78999999999997 57 99999999887
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=155.33 Aligned_cols=136 Identities=19% Similarity=0.258 Sum_probs=104.2
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC-ce---EEEEE-eecCCCCCeeEEEEc
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS-EV---VTFEI-LSDDYSSELNSIAIN 110 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~-e~---v~f~~-LS~D~s~~In~i~~n 110 (358)
+++++.++|...|++++|||||++| |+|+ +++++||++.+......-..+. .. ..... .++.....|++++|+
T Consensus 55 ~~~~~~~~h~~~V~~v~fspdg~~l-a~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s 132 (393)
T 1erj_A 55 VELHKSLDHTSVVCCVKFSNDGEYL-ATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 132 (393)
T ss_dssp EEEEEEEECSSCCCEEEECTTSSEE-EEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC
T ss_pred ceeEEecCCCCEEEEEEECCCCCEE-EEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC
Confidence 4677888999999999999999987 4565 5789999998754321110000 00 00000 011112359999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
|++.+||+|+.||+|++||+.+++.+..+.+|...+ .+++|+|++.+|+| .| +|+|||+.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v-----------------~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI-----------------YSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCE-----------------EEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 999999999999999999999999999999998877 88999999999997 46 99999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+|+
T Consensus 196 ~~~ 198 (393)
T 1erj_A 196 TGQ 198 (393)
T ss_dssp TTE
T ss_pred CCe
Confidence 987
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.1e-16 Score=158.65 Aligned_cols=135 Identities=19% Similarity=0.228 Sum_probs=107.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+++..|+... ++++.+ .|...+++++|||||++| ++|+.++.|+|||.....+
T Consensus 439 ~~l~~~~~d~~v~~w~~~~--------------~~~~~~~~~~~~v~~~~~spd~~~l-as~~~d~~i~iw~~~~~~~-- 501 (577)
T 2ymu_A 439 QTIASASDDKTVKLWNRNG--------------QLLQTLTGHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQLL-- 501 (577)
T ss_dssp SEEEEEETTSEEEEEETTS--------------CEEEEEECCSSCEEEEEECTTSCEE-EEEETTSEEEEEETTSCEE--
T ss_pred CEEEEEcCCCEEEEEECCC--------------CEEEEEcCCCCCEEEEEEcCCCCEE-EEEeCCCEEEEEcCCCCEE--
Confidence 3667788888898897321 123333 477889999999999987 5778899999999653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
+.. ..+...|++|+|+|++++||+|+.||+|++||. +++++.++.+|...|
T Consensus 502 -~~~-----------~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v---------------- 552 (577)
T 2ymu_A 502 -QTL-----------TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV---------------- 552 (577)
T ss_dssp -EEE-----------ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCE----------------
T ss_pred -EEE-----------eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCE----------------
Confidence 111 123368999999999999999999999999994 788999999998887
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+|||++|+| .| +|+|||
T Consensus 553 -~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 553 -WGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -EEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 88999999999997 47 999997
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.7e-16 Score=150.14 Aligned_cols=136 Identities=8% Similarity=0.048 Sum_probs=102.8
Q ss_pred eEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC----------------
Q psy2085 37 ELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD---------------- 99 (358)
Q Consensus 37 eliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D---------------- 99 (358)
...+.+. |...|++++|+|||++| +||+.|++|+|||+.+.............+..+.++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l-~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRI-VSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEE-EEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 3445553 88999999999999976 67889999999998764322111111111111111221
Q ss_pred -------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 100 -------------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 100 -------------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
++..|.+++|+|++..|++|+.||+|++||+++++++.++.+|...+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v-------------- 199 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADV-------------- 199 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE--------------
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCe--------------
Confidence 23678999999999999999999999999999999999999988776
Q ss_pred CCceeeEEcC--CCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEE--EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~--d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+| ++..|+| .| +|++||+.+|+
T Consensus 200 ---~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 200 ---LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ---EEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ---EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 6788877 4678886 47 99999999988
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.5e-16 Score=150.40 Aligned_cols=151 Identities=5% Similarity=0.045 Sum_probs=104.2
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC-cee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL-SMK--F 82 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l-slk--~ 82 (358)
++.+++++++..|+...+ ++++.++++..|.+++|+|++ ++++ .+++|+|||+.+. ... +
T Consensus 74 ~~~~~~d~~v~iWd~~~~-------------~~~~~~~~~~~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKK-------------QDVSRIKVDAPVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp EEECSSTTEEEEEETTTT-------------EEEEEEECSSCEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCC
T ss_pred EEEECCccEEEEEECCCC-------------cEEEEEECCCceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEe
Confidence 356677788999984333 345566778888888888775 2221 2456666666543 100 0
Q ss_pred e-----------------eeccCceE--EE---------------------EEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 83 E-----------------RCFDSEVV--TF---------------------EILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 83 ~-----------------r~~d~e~v--~f---------------------~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
. ...+..+. +. ...-..|.+.|++|+|+|++.+||+|+.|
T Consensus 137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence 0 00000000 00 01113455789999999999999999999
Q ss_pred Ce-EEEEeCCCCceeEEEe-C-CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GK-VEAWDPRMKVKAGTLD-C-AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 Gt-V~iWD~Rs~~~i~~L~-~-~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+ |++||+++++++.++. + |...+ .+|+|+|+|++|+| .| +|+|||+.++.
T Consensus 217 ~~~v~iwd~~~~~~~~~~~~g~h~~~v-----------------~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 217 GTIIRVFKTEDGVLVREFRRGLDRADV-----------------VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CSEEEEEETTTCCEEEEEECTTCCSCE-----------------EEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCEEEEEECCCCcEEEEEEcCCCCCcE-----------------EEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 98 9999999999999998 4 66666 88999999999997 46 99999998754
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-15 Score=141.63 Aligned_cols=155 Identities=13% Similarity=0.074 Sum_probs=118.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.++.+..|+-... ++++.+. |...|.+++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 45 ~~l~~~~~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 45 DLLFSCSKDSSASVWYSLNG-------------ERLGTLDGHTGTIWSIDVDCFTKYC-VTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp CEEEEEESSSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTTEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCEEEEEeCCCc-------------hhhhhhhhcCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCcEEE
Confidence 47888899999999982222 2344454 77899999999999987 567789999999998764432
Q ss_pred eeeccCceEEEEEeecCCC-----------------------------------------------CCeeEEEEcCCCCE
Q psy2085 83 ERCFDSEVVTFEILSDDYS-----------------------------------------------SELNSIAINPVHQL 115 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s-----------------------------------------------~~In~i~~np~~~l 115 (358)
.......+ ....++++.. ..|.+++|+|++.+
T Consensus 111 ~~~~~~~v-~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 111 TWKSPVPV-KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEECSSCE-EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred EeecCCCe-EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 22222222 1111222110 18999999999999
Q ss_pred EEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||.|.+||+++ +..+..+..|...+ .++.|+|++.+|++ .| .|+|||+.+++
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI-----------------SDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEEECCSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEEecCCCce-----------------eEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 99999999999999999 77888888887776 78999999999986 46 99999999987
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.71 E-value=6.5e-16 Score=150.91 Aligned_cols=172 Identities=13% Similarity=0.134 Sum_probs=105.1
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee--e
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF--E 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~--~ 83 (358)
.+.|+-|+++..|+...+ +.+.+++--.+...|++|+|||||++| ++|+.|++|+|||+.+..... .
T Consensus 118 ~lAvgld~tV~lWd~~tg----------~~~~~~~~~~~~~~V~sv~fspdg~~l-asgs~Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 118 VLAVALDNSVYLWSASSG----------DILQLLQMEQPGEYISSVAWIKEGNYL-AVGTSSAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EEEEEETTEEEEEETTTC----------CEEEEEECCSTTCCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEeCCEEEEEECCCC----------CEEEEEEecCCCCcEEEEEECCCCCEE-EEEECCCeEEEEEcCCCcEEEEEe
Confidence 356777889999983332 122333333466789999999999987 678899999999998643211 1
Q ss_pred eeccCceEE----------------------------------------EEEeecCCC----------------------
Q psy2085 84 RCFDSEVVT----------------------------------------FEILSDDYS---------------------- 101 (358)
Q Consensus 84 r~~d~e~v~----------------------------------------f~~LS~D~s---------------------- 101 (358)
.|. ..+.. ....+++..
T Consensus 187 ~h~-~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 187 SHS-ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 265 (420)
T ss_dssp CCS-SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC
T ss_pred CCC-CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc
Confidence 110 11100 000111100
Q ss_pred -----------CCeeEEEEcCCC-CEEEEE--eCCCeEEEEeCCCCceeEEEeC-C----------CCc-cccccCCCc-
Q psy2085 102 -----------SELNSIAINPVH-QLICVG--TIEGKVEAWDPRMKVKAGTLDC-A----------FNC-ISNERDTEE- 154 (358)
Q Consensus 102 -----------~~In~i~~np~~-~llasG--s~DGtV~iWD~Rs~~~i~~L~~-~----------~~~-v~~~~~i~g- 154 (358)
..|.+++|+|.+ .++++| +.||+|++||++++.++..+.. . ... +......++
T Consensus 266 ~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~ 345 (420)
T 4gga_A 266 WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ 345 (420)
T ss_dssp SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE
Confidence 578999999964 566654 5799999999999987765541 1 010 111111111
Q ss_pred cc------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 155 KE------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 155 l~------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
+. |. .+..+ .+|+|+|+|++|+| .| +|+|||+.+.
T Consensus 346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 10 21 12223 89999999999997 47 9999999753
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.71 E-value=3.1e-16 Score=151.65 Aligned_cols=153 Identities=12% Similarity=0.112 Sum_probs=114.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+..++++++.+..|. ....+..+ .+..+ .|.+.|++++|+| +|++| ++|+.|++|+|||+.+...
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~~~----------~~~~~~~h~~~V~~~~~~p~~~~~l-~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRVDK----------NVPLVCGHTAPVLDIAWCPHNDNVI-ASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEECCT----------TCCCBCCCSSCEEEEEECTTCTTEE-EEEETTSEEEEEECCTTCC
T ss_pred EEEEEEcCCCEEEEEECccCCCCCC----------CCceEecCCCCEEEEEeCCCCCCEE-EEEeCCCeEEEEEccCCCC
Confidence 3455678899999998 33332211 11222 4778999999999 88765 6788999999999987532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEE--eCCCCccccccCCCcccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKVEAWDPRMKVKAGTL--DCAFNCISNERDTEEKEG 157 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L--~~~~~~v~~~~~i~gl~G 157 (358)
... .......+ ..+...|++|+|+|++ .+|++|+.||+|++||+++++++.++ ..|...+
T Consensus 117 ~~~--~~~~~~~~----~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v----------- 179 (402)
T 2aq5_A 117 VLP--LREPVITL----EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI----------- 179 (402)
T ss_dssp SSC--BCSCSEEE----ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE-----------
T ss_pred ccc--cCCceEEe----cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce-----------
Confidence 110 00011111 1233689999999998 69999999999999999999999999 6777666
Q ss_pred ccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++.+|++ .| .|+|||+.+++
T Consensus 180 ------~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 180 ------YSVDWSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp ------EEEEECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred ------EEEEECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 88999999999986 46 99999999987
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.70 E-value=4.7e-16 Score=144.75 Aligned_cols=123 Identities=14% Similarity=0.195 Sum_probs=102.5
Q ss_pred eEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 37 ELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
.+...+ .|...|++++|+|||++| ++|+.++.|+|||+.+.... +.. ..+...|++++|+|++++
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l-~s~~~dg~i~iw~~~~~~~~--~~~-----------~~h~~~v~~~~~~~~~~~ 79 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFE--KTI-----------SGHKLGISDVAWSSDSNL 79 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEE--EEE-----------CCCSSCEEEEEECTTSSE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEE-EEeeCCCeEEEEeCCCcccc--hhh-----------ccCCCceEEEEEcCCCCE
Confidence 344444 478899999999999977 67788999999999764321 111 123368999999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||+|++||+++++++..+.+|...+ ..+.|+|++++|++ .| +|+|||+.+++
T Consensus 80 l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 80 LVSASDDKTLKIWDVSSGKCLKTLKGHSNYV-----------------FCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------------EEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEcCCCCCE-----------------EEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 9999999999999999999999999888776 78999999999997 46 99999999887
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.5e-16 Score=147.09 Aligned_cols=119 Identities=9% Similarity=0.053 Sum_probs=94.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs 120 (358)
.|.+.|++++|+|||++| +||+.|++|+|||+.....+..+.+ ..|++.|++|+|+|. +.+||||+
T Consensus 7 ~h~~~V~~~~~s~~g~~l-as~s~D~~v~iw~~~~~~~~~~~~l-----------~gH~~~V~~v~~s~~~~g~~l~s~s 74 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRM-ATCSSDKTIKIFEVEGETHKLIDTL-----------TGHEGPVWRVDWAHPKFGTILASCS 74 (297)
T ss_dssp SCSSCEEEEEECTTSSEE-EEEETTSCEEEEEBCSSCBCCCEEE-----------CCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CCcCceEEEEECCCCCEE-EEEeCCCEEEEEecCCCCcEEEEEE-----------ccccCCeEEEEecCCCcCCEEEEEc
Confidence 478899999999999986 6788999999999975322111111 233478999999864 78999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||++++. ++.++.+|...+ .+++|+|+ +.+|++ .| +|+|||+.++.
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v-----------------~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHAVHSASV-----------------NSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCCEEEEEEcCCCceEEEEEeecCCCce-----------------eEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 99999999999874 567777777766 88999997 788886 46 99999998763
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-15 Score=140.88 Aligned_cols=149 Identities=11% Similarity=0.152 Sum_probs=115.1
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++ ++.+..|+ ...+ ....+..+....+...+.+++|+|||++| ++|+.++.|++||+.+.....
T Consensus 64 ~~l~~~~-dg~i~iw~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~ 133 (337)
T 1gxr_A 64 RHVYTGG-KGCVKVWDISHPG--------NKSPVSQLDCLNRDNYIRSCKLLPDGCTL-IVGGEASTLSIWDLAAPTPRI 133 (337)
T ss_dssp SEEEEEC-BSEEEEEETTSTT--------CCSCSEEEECSCTTSBEEEEEECTTSSEE-EEEESSSEEEEEECCCC--EE
T ss_pred cEEEEcC-CCeEEEEECCCCC--------ceeeeecccccCCCCcEEEEEEcCCCCEE-EEEcCCCcEEEEECCCCCcce
Confidence 3566666 88999998 3221 11233344444578899999999999987 566789999999998754221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
.... ..+...|++++|+|++++|++|+.||.|.+||+++++.+..+..|...+
T Consensus 134 ~~~~-----------~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i---------------- 186 (337)
T 1gxr_A 134 KAEL-----------TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA---------------- 186 (337)
T ss_dssp EEEE-----------ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE----------------
T ss_pred eeec-----------ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce----------------
Confidence 1111 1122679999999999999999999999999999999999998887766
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|+++.|++ .| .|++||+.+++
T Consensus 187 -~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 187 -SCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp -EEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred -EEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 78999999999986 46 99999999887
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.69 E-value=7.5e-16 Score=148.95 Aligned_cols=153 Identities=16% Similarity=0.150 Sum_probs=110.5
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEE-E--eeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQ-D--FEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliq-d--fe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+.+++|.|+++..|+-...+ .+..+. . ..|...|.++.|+| ++.+| ++|+.|++|+|||+.....
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~----------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQ----------RISIFGSEFPSGHTADVLSLSINSLNANMF-ISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CEEEECTTSCEEEECTTTCC----------EEEEECCCSSSSCCSCEEEEEECSSSCCEE-EEEETTSCEEEEETTTTCC
T ss_pred EEEEECCCCcEEEEEcCCCc----------EEEEeecccCCCCccCeEEEEeecCCCCEE-EEEECCCeEEEEECCCCCc
Confidence 57899999999999932221 111110 0 13567899999987 67654 7888999999999974211
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCcccccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKEGKA 159 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~GtR 159 (358)
. .+.. ..+.+.|++|+|+|++++|++|+.||+|++||++++.++.++..+...... ...+
T Consensus 241 ~-~~~~-----------~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v------- 301 (380)
T 3iz6_a 241 A-VRTY-----------HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIV------- 301 (380)
T ss_dssp C-CEEE-----------CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSC-------
T ss_pred c-eEEE-----------CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCce-------
Confidence 0 0000 123368999999999999999999999999999999999888754321100 0011
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+++|+|+|++|++ .| .|+|||..+++.
T Consensus 302 ----~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 302 ----TSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp ----SEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred ----EEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 78999999999997 46 999999988873
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.69 E-value=2.1e-15 Score=144.01 Aligned_cols=158 Identities=8% Similarity=0.019 Sum_probs=109.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++.+..|+-...+ ....++...|...|.+++|+| ++++| ++|+.++.|+|||+.+..+..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~d~~i~iwd~~~~~~~~ 155 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQN----------KTSFIQGMGPGDAITGMKFNQFNTNQL-FVSSIRGATTLRDFSGSVIQV 155 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTT----------CEEEECCCSTTCBEEEEEEETTEEEEE-EEEETTTEEEEEETTSCEEEE
T ss_pred CEEEEEcCCCeEEEEeCCCcc----------cceeeecCCcCCceeEEEeCCCCCCEE-EEEeCCCEEEEEECCCCceEE
Confidence 478899999999999932211 112222235888999999999 56655 678899999999998643322
Q ss_pred eeecc--CceEEEEEeecC----------------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCC
Q psy2085 83 ERCFD--SEVVTFEILSDD----------------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPR 131 (358)
Q Consensus 83 ~r~~d--~e~v~f~~LS~D----------------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~R 131 (358)
..... ...+....++++ +...|++++|+|++. +|++|+.||+|++||++
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 21111 011222222222 226788888888877 88888888888888888
Q ss_pred C----CceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 132 M----KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 132 s----~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ +.++..+ .|...+ .+|+|+| ++.+|++ .| .|+|||+.+++
T Consensus 236 ~~~~~~~~~~~~-~~~~~v-----------------~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 236 NIKDKNSYIAEM-PHEKPV-----------------NAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp GCCSTTCEEEEE-ECSSCE-----------------EEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CCCcccceEEEe-cCCCce-----------------EEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 7 5556655 344444 8899999 9999986 46 99999999887
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8e-16 Score=150.58 Aligned_cols=144 Identities=11% Similarity=0.012 Sum_probs=98.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee----CCCCEeEEEEcCCCCEE-----------EEEEecCC
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE----MPGVSTSVRISPDGQYV-----------LSTGIYKP 68 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe----~~~~v~~v~~SpDG~~L-----------latG~~d~ 68 (358)
++.-|+|.|+++..|+-..+ ++++.|. +...+.+++|||||+++ +++|+.|.
T Consensus 194 ~~LaSgS~D~TIkIWDl~TG-------------k~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~ 260 (356)
T 2w18_A 194 EALLGTTIMNNIVIWNLKTG-------------QLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVF 260 (356)
T ss_dssp TEEEEEETTSEEEEEETTTC-------------CEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCE
T ss_pred ceEEEecCCCcEEEEECCCC-------------cEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCc
Confidence 46678999999999994333 2333343 22467888999999987 36788999
Q ss_pred eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 69 RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 69 ~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
+|++||+.+.... . +. ...+.+++...+.+.+++ +.++|+|+.||+|++||+++++++.+|.+|...+.
T Consensus 261 tIklWd~~tgk~l--~-----v~-~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vv- 329 (356)
T 2w18_A 261 QLIVINPKTTLSV--G-----VM-LYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHW- 329 (356)
T ss_dssp EEEEEETTTTEEE--E-----EE-EECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCC-
T ss_pred EEEEEECCCCEEE--E-----EE-EeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeE-
Confidence 9999999864221 0 00 000112222333334443 78999999999999999999999999998765431
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
..++|||+|++|+| .| +|||||.
T Consensus 330 ---------------s~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 330 ---------------SFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp ---------------CEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ---------------EEEEECCCCCEEEEEECCCcEEEecC
Confidence 35899999999997 47 9999995
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.5e-15 Score=146.80 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=115.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.|+.+..|+ .... .... .. +.+..+ .|...|++++|+|+|+.++++|+.++.|+|||+.+....
T Consensus 95 ~~l~s~s~dg~v~vw~~~~~~-~~~~---~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 95 NVIASGSEDCTVMVWEIPDGG-LVLP---LR---EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV 167 (402)
T ss_dssp TEEEEEETTSEEEEEECCTTC-CSSC---BC---SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEeCCCeEEEEEccCCC-Cccc---cC---CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc
Confidence 5788999999999999 3321 1110 00 223334 478899999999999655678889999999999865321
Q ss_pred eeeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE-eCCCCc-cccccCCCccccc
Q psy2085 82 FERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL-DCAFNC-ISNERDTEEKEGK 158 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L-~~~~~~-v~~~~~i~gl~Gt 158 (358)
. .+. ..+...|++++|+|++.+|++|+.||+|++||+++++.+..+ .+|... +
T Consensus 168 ~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~------------ 223 (402)
T 2aq5_A 168 L------------TLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRP------------ 223 (402)
T ss_dssp E------------EECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSC------------
T ss_pred E------------EEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcc------------
Confidence 1 111 223368999999999999999999999999999999999888 566543 3
Q ss_pred cCCCceeeEEcCCCCEEEEe-----c-ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEESS-----D-DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llSa-----D-~IKIWD~~tG~ 190 (358)
..+.|+|++.+|+++ | .|+|||..+++
T Consensus 224 -----~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 224 -----VHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp -----CEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred -----eEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 679999999988864 6 99999999876
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.68 E-value=7.6e-16 Score=149.72 Aligned_cols=159 Identities=11% Similarity=-0.003 Sum_probs=118.3
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC---CCc
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD---NLS 79 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~---~ls 79 (358)
.|..+++.|+++..|+ ....+. . ..+....+.|...|.+++|+|+|++| ++|+.|++|+|||+. ...
T Consensus 77 ~~l~s~s~dg~v~vwd~~~~~~~----~----~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~dg~i~vwd~~~~~~~~ 147 (437)
T 3gre_A 77 PYLITGSDQGVIKIWNLKEIIVG----E----VYSSSLTYDCSSTVTQITMIPNFDAF-AVSSKDGQIIVLKVNHYQQES 147 (437)
T ss_dssp CEEEEEETTSEEEEEEHHHHHTT----C----CCSCSEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEEEEEEEETT
T ss_pred CEEEEecCCceEEEeECcccccC----c----ccceeeeccCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEEeccccCCc
Confidence 5889999999999999 321100 0 11223445688999999999999977 577889999999995 221
Q ss_pred eeeeeeccCceEEEEEeecC-CCCCeeEEE--EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--CCCccccccCCCc
Q psy2085 80 MKFERCFDSEVVTFEILSDD-YSSELNSIA--INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--AFNCISNERDTEE 154 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D-~s~~In~i~--~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--~~~~v~~~~~i~g 154 (358)
. .+......+....++++ ....+.++. ++|++.+|++|+.||+|++||+++++++.++.+ |...+
T Consensus 148 ~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v-------- 217 (437)
T 3gre_A 148 E--VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAV-------- 217 (437)
T ss_dssp E--EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCE--------
T ss_pred e--eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce--------
Confidence 1 11111112333333442 336788888 668899999999999999999999999999987 55555
Q ss_pred cccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++.+|++ .| +|+|||+.+++
T Consensus 218 ---------~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 218 ---------SSICIDEECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp ---------EEEEECTTSCEEEEEETTSCEEEEETTTTE
T ss_pred ---------EEEEECCCCCEEEEEcCCCeEEEEEcCCcc
Confidence 88999999999997 46 99999999887
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.68 E-value=3e-16 Score=149.12 Aligned_cols=155 Identities=14% Similarity=0.061 Sum_probs=100.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-e-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-M- 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-l- 80 (358)
.|..+++.++.+..|+.... ..++++.+ .|...|++++|+|||++| ++|+.|++|+|||+.+.. .
T Consensus 24 ~~l~~~~~d~~i~iw~~~~~-----------~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 24 TEFVTTTATNQVELYEQDGN-----------GWKHARTFSDHDKIVTCVDWAPKSNRI-VTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp SEEECCCSSSCBCEEEEETT-----------EEEECCCBCCCSSCEEEEEECTTTCCE-EEEETTSSEEEC------CCC
T ss_pred CEEEEecCCCEEEEEEccCC-----------ceEEEEEEecCCceEEEEEEeCCCCEE-EEEeCCCeEEEEEcCCCCcee
Confidence 46778889999999993221 01233333 377889999999999977 577889999999998643 1
Q ss_pred ---eeeeeccCceEEEEEeecC---------------------------------CCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 81 ---KFERCFDSEVVTFEILSDD---------------------------------YSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 81 ---k~~r~~d~e~v~f~~LS~D---------------------------------~s~~In~i~~np~~~llasGs~DGt 124 (358)
.+..|. .. +....++++ +...|++++|+|++++|++|+.||+
T Consensus 92 ~~~~~~~~~-~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 92 QTLVLLRLN-RA-ATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp CEEECCCCS-SC-EEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred eeeEecccC-Cc-eEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 111111 11 111111211 2256788888888888888888888
Q ss_pred EEEEeCCC------------------CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEE
Q psy2085 125 VEAWDPRM------------------KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQA 183 (358)
Q Consensus 125 V~iWD~Rs------------------~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKI 183 (358)
|++||+++ ++++..+ .|...+ .+++|+|++++|++ .| +|+|
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v-----------------~~~~~sp~~~~l~~~~~d~~i~i 231 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV-----------------HAVGFSPSGNALAYAGHDSSVTI 231 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE-----------------EEEEECTTSSCEEEEETTTEEC-
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE-----------------EEEEECCCCCEEEEEeCCCcEEE
Confidence 88888753 3333444 444444 88999999999986 46 9999
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||+.+++
T Consensus 232 wd~~~~~ 238 (377)
T 3dwl_C 232 AYPSAPE 238 (377)
T ss_dssp CEECSTT
T ss_pred EECCCCC
Confidence 9999886
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.4e-16 Score=147.69 Aligned_cols=118 Identities=12% Similarity=0.018 Sum_probs=92.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs 120 (358)
.|.+.|++++|+|||++| +||+.|++|+|||+.+....... .+ ..|.+.|++|+|+| ++++|++|+
T Consensus 11 ~H~~~V~~v~~s~~g~~l-asgs~D~~v~lwd~~~~~~~~~~----------~l-~gH~~~V~~v~~~~~~~~~~l~s~s 78 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRL-ATCSSDRSVKIFDVRNGGQILIA----------DL-RGHEGPVWQVAWAHPMYGNILASCS 78 (316)
T ss_dssp ---CCEEEEEECGGGCEE-EEEETTTEEEEEEEETTEEEEEE----------EE-ECCSSCEEEEEECCGGGSSCEEEEE
T ss_pred cccCeEEEeeEcCCCCEE-EEEeCCCeEEEEEecCCCcEEEE----------EE-cCCCccEEEEEeCCCCCCCEEEEEE
Confidence 478899999999999976 67889999999999754321111 11 23447899999986 478999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCC
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG 189 (358)
.||+|++||++++. ++.++.+|...+ ++|+|+|+ +.+|+| .| +|+|||..++
T Consensus 79 ~D~~v~iWd~~~~~~~~~~~~~~h~~~V-----------------~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 79 YDRKVIIWREENGTWEKSHEHAGHDSSV-----------------NSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp TTSCEEEECCSSSCCCEEEEECCCSSCC-----------------CEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred CCCEEEEEECCCCcceEEEEccCCCCce-----------------EEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 99999999999874 567777787776 88999998 778887 46 9999999876
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.68 E-value=2.5e-15 Score=140.39 Aligned_cols=145 Identities=11% Similarity=0.107 Sum_probs=112.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee---CCCCEeEEEEcCC----CCEEEEEEecCCeEEEEEcCC
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE---MPGVSTSVRISPD----GQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe---~~~~v~~v~~SpD----G~~LlatG~~d~~IrvwDl~~ 77 (358)
+.+.++++..+..|+-... +.+..++.+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+
T Consensus 36 ~~~~~~~~~~v~vw~~~~~----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l-~~~~~dg~i~v~d~~~ 104 (366)
T 3k26_A 36 LVFATVGSNRVTLYECHSQ----------GEIRLLQSYVDADADENFYTCAWTYDSNTSHPLL-AVAGSRGIIRIINPIT 104 (366)
T ss_dssp EEEEEEETTEEEEEEECGG----------GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEE-EEEETTCEEEEECTTT
T ss_pred eEEEECCCCEEEEEEcCCC----------cEEEeeeeccccCCCCcEEEEEeccCCCCCCCEE-EEecCCCEEEEEEchh
Confidence 4566666778888983222 1234455554 5688999999999 5555 6788999999999986
Q ss_pred CceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEE---eCCCCccccccCCC
Q psy2085 78 LSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTL---DCAFNCISNERDTE 153 (358)
Q Consensus 78 lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L---~~~~~~v~~~~~i~ 153 (358)
...... + ..+...|++++|+| ++.+|++|+.||+|++||+++++.+..+ ..|...+
T Consensus 105 ~~~~~~------------~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v------- 164 (366)
T 3k26_A 105 MQCIKH------------Y-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEV------- 164 (366)
T ss_dssp CCEEEE------------E-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCE-------
T ss_pred ceEeee------------e-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCce-------
Confidence 533211 1 12236899999999 8999999999999999999999998888 5566665
Q ss_pred ccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.+|++ .| .|+|||+.+++
T Consensus 165 ----------~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 165 ----------LSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp ----------EEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred ----------eEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 88999999999997 46 99999999876
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-15 Score=140.24 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=96.8
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs 120 (358)
.|.+.|++++|+|||++| ++|+.++.|+|||+.+....+.. ...+ ..+...|++++|+| ++.+|++|+
T Consensus 9 gH~~~v~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~--------~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~ 78 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHV-ATCSSDQHIKVFKLDKDTSNWEL--------SDSW-RAHDSSIVAIDWASPEYGRIIASAS 78 (351)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEETTSEEEEEEECSSSCCEEE--------EEEE-ECCSSCEEEEEECCGGGCSEEEEEE
T ss_pred ccccceeEEEEcCCCCEE-EEeeCCCeEEEEECCCCCCccee--------ccee-ccCCCcEEEEEEcCCCCCCEEEEEc
Confidence 478899999999999976 67788999999999864321110 0011 12337899999999 589999999
Q ss_pred CCCeEEEEeCCCC---------ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEEC
Q psy2085 121 IEGKVEAWDPRMK---------VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTK 186 (358)
Q Consensus 121 ~DGtV~iWD~Rs~---------~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~ 186 (358)
.||+|++||++++ +++..+..|...+ .++.|+|+ +.+|++ .| .|+|||+
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSL-----------------YSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCce-----------------eEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 9999999999987 5577777777766 88999999 998886 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 142 ~~~~ 145 (351)
T 3f3f_A 142 LEPS 145 (351)
T ss_dssp SSTT
T ss_pred CChH
Confidence 8876
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.68 E-value=2.3e-15 Score=143.44 Aligned_cols=153 Identities=17% Similarity=0.100 Sum_probs=109.5
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee----C---CCCEeEEEEcCCCCEEEEEEecC---CeEEEEE
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE----M---PGVSTSVRISPDGQYVLSTGIYK---PRVRCYE 74 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe----~---~~~v~~v~~SpDG~~LlatG~~d---~~IrvwD 74 (358)
+.++++.++.+..|+-... ++++.+. | ...+.+++|+|+|++|+ +|+.+ +.|+|||
T Consensus 199 ~l~~~~~dg~i~i~d~~~~-------------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~-~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL-------------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLA-IAHDSNSFGCITLYE 264 (397)
T ss_dssp EEEEECTTSEEEEEETTTT-------------EEEEEEECCC---CCCCCEEEEEECSSTTEEE-EEEEETTEEEEEEEE
T ss_pred eEEEEeCCCcEEEEECCCC-------------ceeEEEeccccccccCCccceEEECCCCCEEE-EEecCCCCceEEEEE
Confidence 6677888888888883211 2344444 4 78899999999999874 56678 8999999
Q ss_pred cCCCceeeeeeccCceE--EEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe------CC----
Q psy2085 75 TDNLSMKFERCFDSEVV--TFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD------CA---- 142 (358)
Q Consensus 75 l~~lslk~~r~~d~e~v--~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~------~~---- 142 (358)
+.+...... ...... ....-.-.+...|++++|+|++.+|++|+.||+|++||+++++++..+. .|
T Consensus 265 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 342 (397)
T 1sq9_A 265 TEFGERIGS--LSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDI 342 (397)
T ss_dssp TTTCCEEEE--ECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGC
T ss_pred CCCCcccce--eccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhh
Confidence 986532211 110000 0000000023689999999999999999999999999999999999998 55
Q ss_pred -----------CCccccccCCCccccccCCCceeeEEcCCC----------CEEEE--ec-ceEEEECCCCc
Q psy2085 143 -----------FNCISNERDTEEKEGKASSDESSEEEEEEE----------EEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 143 -----------~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~----------~~llS--aD-~IKIWD~~tG~ 190 (358)
...+ .+++|+|++ .+|++ .| .|+|||+.+|+
T Consensus 343 ~~g~~~~~~~~~~~v-----------------~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 343 LAVDEHGDSLAEPGV-----------------FDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCBCTTSCBCSSCCE-----------------EEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred hccccccccccCCce-----------------eEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 3333 889999998 68886 46 99999998874
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-15 Score=139.69 Aligned_cols=158 Identities=10% Similarity=0.015 Sum_probs=110.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.+.++.++.+..|+.... ..++++.+. |...|++++|+|||++| ++|+.++.|++||+.+.....
T Consensus 21 ~~l~~~~~d~~v~i~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 21 TQIAICPNNHEVHIYEKSGN-----------KWVQVHELKEHNGQVTGVDWAPDSNRI-VTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp SEEEEECSSSEEEEEEEETT-----------EEEEEEEEECCSSCEEEEEEETTTTEE-EEEETTSCEEEEEEETTEEEE
T ss_pred CEEEEEeCCCEEEEEeCCCC-----------cEEeeeeecCCCCcccEEEEeCCCCEE-EEEcCCCeEEEEECCCCeeee
Confidence 46778888999999983221 134566664 78899999999999987 567789999999997654221
Q ss_pred eeec--cCceEEEEEeecC---------------------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 83 ERCF--DSEVVTFEILSDD---------------------------------YSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 83 ~r~~--d~e~v~f~~LS~D---------------------------------~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
.... ....+....++++ +...|++++|+|++.+|++|+.||+|++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 1110 0111111111111 1256788888888888888888888888
Q ss_pred EeCC------------------CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 128 WDPR------------------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 128 WD~R------------------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
||++ ++.++..+..|...+ .++.|+|++.+|++ .| .|+|||.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV-----------------HGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE-----------------EEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred EEcccccccccccccccccccchhhheEecCCCCCeE-----------------EEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 8854 456666666665554 88999999999986 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 232 ~~~~ 235 (372)
T 1k8k_C 232 DKKM 235 (372)
T ss_dssp GGTT
T ss_pred CCCc
Confidence 9888
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.68 E-value=8.1e-16 Score=154.33 Aligned_cols=115 Identities=18% Similarity=0.248 Sum_probs=95.3
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|.+.|++|+|||||++| |||+.|++|+|||.....++ . + ..|++.|.+++|+|++++||+|+.|
T Consensus 14 GH~~~V~~~a~spdg~~l-as~~~d~~v~iWd~~~~~~~---~----------l-~gh~~~V~~l~fspdg~~las~~~d 78 (577)
T 2ymu_A 14 AHSSSVRGVAFSPDGQTI-ASASDDKTVKLWNRNGQLLQ---T----------L-TGHSSSVWGVAFSPDGQTIASASDD 78 (577)
T ss_dssp CCSSCEEEEEECTTSSCE-EEEETTSEEEEECTTSCEEE---E----------E-ECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEEECCCCCEE-EEEeCCCEEEEEECCCCEEE---E----------E-eCCCCCEEEEEECCCCCEEEEEeCC
Confidence 388999999999999987 67789999999996432111 1 1 1234789999999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|++||. +++++.++.+|...+ .+++|+|++++|++ .| ++++|+.....
T Consensus 79 ~~i~vWd~-~~~~~~~~~~~~~~v-----------------~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~ 131 (577)
T 2ymu_A 79 KTVKLWNR-NGQLLQTLTGHSSSV-----------------RGVAFSPDGQTIASASDDKTVKLWNRNGQL 131 (577)
T ss_dssp SCEEEEET-TSCEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTCCE
T ss_pred CEEEEEEC-CCCEEEEEECCCCCE-----------------EEEEECCCCCEEEEEcCCCceeecccccce
Confidence 99999995 778899999988777 88999999999997 36 99999986543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.68 E-value=3.8e-15 Score=144.41 Aligned_cols=158 Identities=15% Similarity=0.137 Sum_probs=115.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.+.+.++.++.+..|....+ ++..+....+...|.+++|+|||++| ++|+.++.|+|||+.+......
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~-----------~~~~~~~~~~~~~v~~v~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSG-----------SVSALAETDESTYVASVKWSHDGSFL-SVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TSEEEEEETTEEEEEETTTC-----------CEEEEEECCTTCCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEEE
T ss_pred CCEEEEECCCeEEEeeCCCC-----------cEeEeeecCCCCCEEEEEECCCCCEE-EEECCCCeEEEEECcCCeEEEE
Confidence 35678888999999983222 12223334467889999999999987 5678899999999986543211
Q ss_pred e-eccCceEEEE-------Eeec--------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 84 R-CFDSEVVTFE-------ILSD--------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 84 r-~~d~e~v~f~-------~LS~--------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
. .....+..+. ..+. .+.+.|.+++|+|++.+|++|+.||+|++||++++.+
T Consensus 172 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 172 MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 1 1111221111 0111 1227899999999999999999999999999999999
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E----ec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S----SD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S----aD-~IKIWD~~tG~ 190 (358)
+..+..|...+ .+++|+|++..++ + .| .|++||+.+|+
T Consensus 252 ~~~~~~~~~~v-----------------~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 252 KFTKTNHNAAV-----------------KAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp EEEECCCSSCC-----------------CEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred cEEecCCcceE-----------------EEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 99998887766 7899999876555 4 27 99999999988
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.7e-16 Score=162.71 Aligned_cols=142 Identities=11% Similarity=-0.105 Sum_probs=111.1
Q ss_pred EEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEE--EEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 5 YCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSV--RISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v--~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+..++|.|+++..|+ .... .+++.+ .|...|++| .|+|+|..+++||+.|++|+|||+.+...
T Consensus 279 ~lasgs~DgtV~lWD~~~~~-------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 279 TVVCGFKNGFVAEFDLTDPE-------------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEEEETTSEEEEEETTBCS-------------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred eEEEEeCCCEEEEEECCCCC-------------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 678899999999999 3221 012223 377889999 67899844568899999999999976321
Q ss_pred --eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc
Q psy2085 81 --KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 81 --k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.+..|.. . ..|++|+|+|+++.|++|+.|++|++||++++.++.++.+|...|
T Consensus 346 ~~~~~~~~~-----------~--~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V------------ 400 (524)
T 2j04_B 346 TKTTVSRFR-----------G--SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI------------ 400 (524)
T ss_dssp HCEEEEECS-----------C--CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCE------------
T ss_pred ccccccccc-----------c--CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCce------------
Confidence 1111110 0 247899999999999999999999999999999989998888877
Q ss_pred cCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|||+|+.|+| .| +|+|||...+
T Consensus 401 -----~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 401 -----TAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp -----EEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred -----EEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 88999999999997 47 9999998653
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.4e-15 Score=141.21 Aligned_cols=160 Identities=11% Similarity=0.014 Sum_probs=115.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.++.+..|+-... ++++.+ .|...|++++|+|||++| ++|+.+++|+|||+.+.....
T Consensus 110 ~~l~~~~~dg~i~iwd~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 110 RRFILGTTEGDIKVLDSNFN-------------LQREIDQAHVSEITKLKFFPSGEAL-ISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp CEEEEEETTSCEEEECTTSC-------------EEEEETTSSSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCCCE
T ss_pred CEEEEEECCCCEEEEeCCCc-------------ceeeecccccCccEEEEECCCCCEE-EEEeCCCeEEEEeCCCCcCce
Confidence 46778889999999982221 234444 578899999999999976 577889999999998643211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC---------------------
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--------------------- 141 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--------------------- 141 (358)
. + ..+...|++++|+|++.+|++|+.||+|++||+++++++..+..
T Consensus 176 ~---------~----~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 176 T---------L----IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp E---------E----ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred E---------E----cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 0 0 12336899999999999999999999999999999998877752
Q ss_pred ---CCCccc-cccCCCccc-------cc------c-----------CCCc-eeeEEcCCCC-EEEE--ec-ceEEEECCC
Q psy2085 142 ---AFNCIS-NERDTEEKE-------GK------A-----------SSDE-SSEEEEEEEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 142 ---~~~~v~-~~~~i~gl~-------Gt------R-----------s~~P-~sI~fs~d~~-~llS--aD-~IKIWD~~t 188 (358)
+...+. ..++.++-. |+ + ...+ .+++|+|++. +|++ .| .|+|||+.+
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 112221 123333311 22 1 1112 8999999998 8886 46 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 323 ~~ 324 (420)
T 3vl1_A 323 PE 324 (420)
T ss_dssp TT
T ss_pred Cc
Confidence 75
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.7e-16 Score=148.09 Aligned_cols=143 Identities=8% Similarity=0.035 Sum_probs=111.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.|.++++.++.+..|+-...+..+ .+.....+....|+|||++| ++|+.++.|+|||+.+....
T Consensus 69 ~~l~~~~~d~~v~i~d~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~-- 132 (420)
T 3vl1_A 69 SHLYKARLDGHDFLFNTIIRDGSK-------------MLKRADYTAVDTAKLQMRRF-ILGTTEGDIKVLDSNFNLQR-- 132 (420)
T ss_dssp TTEEEEEETTEEEEEECCSEETTT-------------TSCSCCEEEEEEECSSSCEE-EEEETTSCEEEECTTSCEEE--
T ss_pred CeEEEEEcCCcEEEEEecccceee-------------EEecCCceEEEEEecCCCEE-EEEECCCCEEEEeCCCccee--
Confidence 357888999999999922111110 11122345666899999976 67788999999999864321
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
... ..+...|++++|+|++.+|++|+.||+|++||+++++.+..+.+|...+
T Consensus 133 ~~~-----------~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v----------------- 184 (420)
T 3vl1_A 133 EID-----------QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATV----------------- 184 (420)
T ss_dssp EET-----------TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCE-----------------
T ss_pred eec-----------ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcE-----------------
Confidence 111 1233789999999999999999999999999999999999999888877
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++++|++ .| +|+|||+.+++
T Consensus 185 ~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 88999999999997 46 99999999988
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-15 Score=143.84 Aligned_cols=146 Identities=10% Similarity=0.027 Sum_probs=113.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeC-------CCCEeEEEEcCCCCEEEEEEecCC---eEEEE
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEM-------PGVSTSVRISPDGQYVLSTGIYKP---RVRCY 73 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~-------~~~v~~v~~SpDG~~LlatG~~d~---~Irvw 73 (358)
.+.++++.++.+..|+-... ++++.+.. ...+++++|+|+|..++++|+.++ .|++|
T Consensus 179 ~~l~~~~~dg~v~iwd~~~~-------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 179 HVFASAGSSNFASIWDLKAK-------------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp TEEEEESSSSCEEEEETTTT-------------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred cEEEEEcCCCCEEEEECCCC-------------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 46778888999999983221 23334433 578999999999976667888888 99999
Q ss_pred EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCC
Q psy2085 74 ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDT 152 (358)
Q Consensus 74 Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i 152 (358)
|+.+.... .+.. ...+...|++++|+| ++.+|++|+.||+|++||+++++++.++..|...+
T Consensus 246 d~~~~~~~-~~~~----------~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v------ 308 (416)
T 2pm9_A 246 DLRNANTP-LQTL----------NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWC------ 308 (416)
T ss_dssp ETTSTTSC-SBCC----------CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCC------
T ss_pred eCCCCCCC-cEEe----------ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCce------
Confidence 99864211 0011 002236799999999 89999999999999999999999999999887776
Q ss_pred CccccccCCCceeeEEcCCC-CEEEE--ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEEEEE-EEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~-~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|++ .+|++ .| .|+|||+.++.
T Consensus 309 -----------~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 309 -----------FKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp -----------CCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred -----------EEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 789999999 78887 46 99999998765
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.6e-15 Score=139.97 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=113.5
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-.|.++++.|+.+..|+-... +...++.+. +...|.+++|+|+ |++| ++|+.++.|+|||+.+..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l-~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENG-----------RWSQIAVHAVHSASVNSVQWAPHEYGPLL-LVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETT-----------EEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSEEEEEECCTTS
T ss_pred CCEEEEeccCCEEEEEEcCCC-----------ceeEeeeecCCCcceEEEEeCCCCCCCEE-EEecCCCcEEEEecCCCC
Confidence 368899999999999993221 133444443 7789999999999 8876 567789999999998653
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcC-------------CCCEEEEEeCCCeEEEEeCCCCce----eEEEeCC
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINP-------------VHQLICVGTIEGKVEAWDPRMKVK----AGTLDCA 142 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-------------~~~llasGs~DGtV~iWD~Rs~~~----i~~L~~~ 142 (358)
..... .+ ..+...|++++|+| ++.+|++|+.||+|++||++++.. +..+.+|
T Consensus 137 ~~~~~---------~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 137 TTSPI---------II--DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp CCCEE---------EE--ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred ceeeE---------Ee--cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 21110 01 12236899999999 689999999999999999988753 4566677
Q ss_pred CCccccccCCCccccccCCCceeeEEcCC---CCEEEE--ec-ceEEEECCCCc
Q psy2085 143 FNCISNERDTEEKEGKASSDESSEEEEEE---EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 143 ~~~v~~~~~i~gl~GtRs~~P~sI~fs~d---~~~llS--aD-~IKIWD~~tG~ 190 (358)
...+ .+++|+|+ +.+|++ .| .|+|||+.++.
T Consensus 206 ~~~v-----------------~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 206 SDWV-----------------RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSCE-----------------EEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cCcE-----------------eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 7666 88999999 788886 46 99999999874
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.7e-15 Score=156.26 Aligned_cols=155 Identities=16% Similarity=0.172 Sum_probs=114.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.|..++|.|+++..|+-... .+++.| .|...|.+|+|+|||++| +||+.|++|+|||+......
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~-------------~~~~~~~~h~~~v~~~~~s~~~~~l-~s~s~D~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAG-------------VSTRRFVGHTKDVLSVAFSLDNRQI-VSASRDRTIKLWNTLGECKYT 508 (694)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECCSSCEEEEEECTTSSCE-EEEETTSCEEEECTTSCEEEE
T ss_pred CEEEEEeCCCcEEEEECCCC-------------cceeEEeCCCCCEEEEEEeCCCCEE-EEEeCCCEEEEEECCCCccee
Confidence 47889999999999993222 122333 488899999999999987 57788999999998643211
Q ss_pred eeee--ccCceEEEEEeec------------C-------------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 82 FERC--FDSEVVTFEILSD------------D-------------------YSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 82 ~~r~--~d~e~v~f~~LS~------------D-------------------~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
.... .+...+....+++ | |.+.|++|+|+|++.+|++|+.||+|++|
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 1000 0011122222222 1 22679999999999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
|+++++++..+..+. .+ .++.|+|++..|++ .| .|+|||+.+++
T Consensus 589 d~~~~~~~~~~~~~~-~v-----------------~~~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 589 DLAEGKKLYSLEANS-VI-----------------HALCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp ETTTTEEEECCBCSS-CE-----------------EEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred ECCCCceEEEecCCC-cE-----------------EEEEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 999999888776543 33 78999999998886 56 99999999887
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.1e-15 Score=145.06 Aligned_cols=149 Identities=8% Similarity=-0.007 Sum_probs=106.8
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
-.|..+++.|+++..|+-...+ ...+....+...+++++|+|||++| ++|+.++.|+|||+.+.....
T Consensus 139 ~~~l~s~s~dg~i~~wd~~~~~-----------~~~~~~~~~~~~i~~~~~~pdg~~l-asg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 139 TEYFIWADNRGTIGFQSYEDDS-----------QYIVHSAKSDVEYSSGVLHKDSLLL-ALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp CCEEEEEETTCCEEEEESSSSC-----------EEEEECCCSSCCCCEEEECTTSCEE-EEECTTSCEEEEESSCTTSCC
T ss_pred CCEEEEEeCCCcEEEEECCCCc-----------EEEEEecCCCCceEEEEECCCCCEE-EEEcCCCEEEEEECCCCCCCc
Confidence 3588999999999999932221 1111122345579999999999976 678899999999998754220
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC---CCCccccccCCCcccccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC---AFNCISNERDTEEKEGKA 159 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~---~~~~v~~~~~i~gl~GtR 159 (358)
. .+...+.+.|++|+|+|++.+|++|+ |++|++||+|+++++.++.. +...+..
T Consensus 207 -~----------~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~----------- 263 (343)
T 3lrv_A 207 -S----------RFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT----------- 263 (343)
T ss_dssp -E----------ECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CC-----------
T ss_pred -c----------EEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccc-----------
Confidence 0 01112337899999999999999999 55999999999887655543 2112100
Q ss_pred CCCceeeEEcCCCCEEEE--e-c-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--S-D-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--a-D-~IKIWD~~tG~ 190 (358)
.+++|+|+|++|++ + | .|+||+..++.
T Consensus 264 ----~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 264 ----VTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp ----EEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred ----eEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 35999999999997 7 8 99999997654
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.6e-15 Score=145.35 Aligned_cols=130 Identities=10% Similarity=0.125 Sum_probs=93.4
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~ 121 (358)
.|...|++++|+|||++|+ +| .|+.|+|||+........ ..+.... --..+...|++++|+|++ .+|++|+.
T Consensus 175 ~h~~~v~~~~~~~~~~~l~-s~-~d~~i~iwd~~~~~~~~~-~~~~~~~----~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYL-SA-DDLRINLWHLEITDRSFN-IVDIKPA----NMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp CCSSCCCEEEECTTSSEEE-EE-CSSEEEEEETTEEEEEEE-EEECCCS----SGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred CCCcceEEEEEcCCCCEEE-Ee-CCCeEEEEECCCCCceee-eeecccc----cccccCcceEEEEECCCCCcEEEEEeC
Confidence 4788999999999999875 56 699999999984211110 0000000 011233689999999998 99999999
Q ss_pred CCeEEEEeCCCCce----eEEEeCCCCccccc------cCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCC-
Q psy2085 122 EGKVEAWDPRMKVK----AGTLDCAFNCISNE------RDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEI- 188 (358)
Q Consensus 122 DGtV~iWD~Rs~~~----i~~L~~~~~~v~~~------~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~t- 188 (358)
||+|++||++++.. +..+..+..+.... ..+ .+|+|+|+|.+|+++ + +|+|||+.+
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----------~~~~~s~~g~~l~~~~~~~v~iwd~~~~ 316 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSI-----------SDVKFSHSGRYMMTRDYLSVKVWDLNME 316 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCE-----------EEEEECTTSSEEEEEESSEEEEEETTCC
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceE-----------EEEEECCCCCEEEEeeCCeEEEEeCCCC
Confidence 99999999999987 78888776410000 011 889999999999985 5 999999987
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 317 ~~ 318 (447)
T 3dw8_B 317 NR 318 (447)
T ss_dssp SS
T ss_pred cc
Confidence 55
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.9e-15 Score=139.92 Aligned_cols=173 Identities=10% Similarity=0.035 Sum_probs=111.0
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.+.++.++.+..|+-.... +++.+ .+...|.+++|+|+|++++++|+.++.|++||+........
T Consensus 158 ~~~~~~~~~~v~~~d~~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~ 224 (408)
T 4a11_B 158 LVAVGTRGPKVQLCDLKSGS-------------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLI 224 (408)
T ss_dssp EEEEEESSSSEEEEESSSSC-------------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSE
T ss_pred EEEEEcCCCeEEEEeCCCcc-------------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccc
Confidence 77888889999999832211 12333 37788999999999998788999999999999976431111
Q ss_pred ee--ccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc-----ccc--cCCC
Q psy2085 84 RC--FDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI-----SNE--RDTE 153 (358)
Q Consensus 84 r~--~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v-----~~~--~~i~ 153 (358)
.. .... ..........+...|++++|+|++.+|++|+.||+|++||+++++....+..+.... ... ....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (408)
T 4a11_B 225 TLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCS 304 (408)
T ss_dssp ECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSS
T ss_pred cccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCC
Confidence 00 0000 000000001233789999999999999999999999999999987654443221110 000 0000
Q ss_pred c-c-c----c----------c-----c-CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 154 E-K-E----G----------K-----A-SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 g-l-~----G----------t-----R-s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
. + . | . . +..+ .+++|+|++.+|+| .| .|+|||+.+++
T Consensus 305 ~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 305 SEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYE 367 (408)
T ss_dssp SCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--
T ss_pred ceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCC
Confidence 0 0 0 1 1 1 1122 88999999999997 36 99999999876
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-15 Score=143.52 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=106.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC--CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP--DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..++|.|+++..|+-... ...+++.| .|.+.|++|+|+| +|++| +||+.|++|+|||+.+...
T Consensus 26 ~~lasgs~D~~v~lwd~~~~-----------~~~~~~~l~gH~~~V~~v~~~~~~~~~~l-~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 26 TRLATCSSDRSVKIFDVRNG-----------GQILIADLRGHEGPVWQVAWAHPMYGNIL-ASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEETTTEEEEEEEETT-----------EEEEEEEEECCSSCEEEEEECCGGGSSCE-EEEETTSCEEEECCSSSCC
T ss_pred CEEEEEeCCCeEEEEEecCC-----------CcEEEEEEcCCCccEEEEEeCCCCCCCEE-EEEECCCEEEEEECCCCcc
Confidence 47889999999999993221 11345555 4889999999987 47765 6788999999999986422
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCcc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl 155 (358)
+.... + ..+...|++|+|+|+ +.+|++|+.||+|++||++++.. ...+.+|...+
T Consensus 94 ~~~~~----------~-~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v--------- 153 (316)
T 3bg1_A 94 EKSHE----------H-AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGC--------- 153 (316)
T ss_dssp CEEEE----------E-CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCB---------
T ss_pred eEEEE----------c-cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCc---------
Confidence 11110 1 223468999999998 77999999999999999987643 23344555444
Q ss_pred ccccCCCceeeEEcCC-----------------CCEEEE--ec-ceEEEECCCC
Q psy2085 156 EGKASSDESSEEEEEE-----------------EEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d-----------------~~~llS--aD-~IKIWD~~tG 189 (358)
.++.|+|+ +.+|+| .| +|+|||..++
T Consensus 154 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 154 --------NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp --------CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred --------ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 67888887 357886 47 9999999765
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.1e-14 Score=135.74 Aligned_cols=113 Identities=14% Similarity=0.168 Sum_probs=88.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..+++.++.+..|+ +...+ .+...+ .|...|++++|+|||++| ++|+.++.|+|||+.+....
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQ------------TIPKAQQMHTGPVLDVCWSDDGSKV-FTASCDKTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSC------------EEEEEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTTEEE
T ss_pred eEEEEECCCCcEEEEEcCCCCc------------eeEEEeccccCCEEEEEECcCCCEE-EEEcCCCcEEEEEcCCCCce
Confidence 6889999999999999 43221 121223 478899999999999987 56788999999999875432
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEE--cCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAI--NPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~--np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
... .+...|++++| +|++.+|++|+.||+|++||+++++++..+..+.
T Consensus 122 ~~~--------------~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 122 QIA--------------QHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEE--------------ECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred eec--------------cccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 111 12267999999 8999999999999999999999999887777543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=9e-15 Score=133.89 Aligned_cols=139 Identities=12% Similarity=0.068 Sum_probs=110.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|+.. +.++.+. +...+.+++|+|+|+ + ++|+.++.|++||+.+....
T Consensus 156 ~~l~~~~~d~~i~i~d~~---------------~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 156 NKFLTASADKTIKLWQND---------------KVIKTFSGIHNDVVRHLAVVDDGH-F-ISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TEEEEEETTSCEEEEETT---------------EEEEEECSSCSSCEEEEEEEETTE-E-EEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEECCCCEEEEecC---------------ceEEEEeccCcccEEEEEEcCCCe-E-EEccCCCeEEEEECCchhhh
Confidence 467888889999999710 2233333 678899999999998 4 57788999999999865322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
.. + ..+...|++++|+|++ .|++|+.||+|++||+++++++..+..+...+
T Consensus 219 ~~---------~----~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i--------------- 269 (313)
T 3odt_A 219 RT---------Y----EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISI--------------- 269 (313)
T ss_dssp EE---------E----ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCE---------------
T ss_pred hh---------h----hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceE---------------
Confidence 11 0 1123679999999999 58899999999999999999999999887776
Q ss_pred CceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
.++.|+|++.++++ .| .|+|||+.+++
T Consensus 270 --~~~~~~~~~~~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 270 --WSVDCMSNGDIIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp --EEEEECTTSCEEEEETTSCEEEEESCGGG
T ss_pred --EEEEEccCCCEEEEeCCCcEEEEeCCCCc
Confidence 78999999986654 56 99999998875
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.65 E-value=9.2e-15 Score=141.66 Aligned_cols=134 Identities=13% Similarity=0.230 Sum_probs=77.9
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEe-
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGT- 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs- 120 (358)
.|.+.|.+++|+|||++| ++|+.++.|+|||+.+....... ..+...|.+++|+|++ .++++|+
T Consensus 215 ~~~~~v~~~~~~~~~~~l-~s~~~d~~v~iwd~~~~~~~~~~-------------~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQL-ASGGNDNVVQIWDARSSIPKFTK-------------TNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTCSSEEEEE-------------CCCSSCCCEEEECTTSTTEEEEECC
T ss_pred CCCCCeeEEEEcCCCCEE-EEEeCCCeEEEccCCCCCccEEe-------------cCCcceEEEEEECCCCCCEEEEecC
Confidence 478899999999999976 56788999999999864332111 0111445566666543 3555543
Q ss_pred -CCCeEEEEeCCCCceeEEEeC--CCCcc----------ccccCCCc-cc------cc--------cCCCc-eeeEEcCC
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDC--AFNCI----------SNERDTEE-KE------GK--------ASSDE-SSEEEEEE 171 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~--~~~~v----------~~~~~i~g-l~------Gt--------Rs~~P-~sI~fs~d 171 (358)
.||+|++||+++++++..+.. ....+ ......+| +. |. .+..+ .+++|+|+
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 456666666655555443320 00000 00000011 00 00 00111 88999999
Q ss_pred CCEEEE--ec-ceEEEECCCCc
Q psy2085 172 EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 172 ~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.+|++ .| .|+|||+.+|+
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC--
T ss_pred CCEEEEEeCCCcEEEEECCCCc
Confidence 999997 46 99999999887
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.9e-15 Score=139.42 Aligned_cols=177 Identities=13% Similarity=0.137 Sum_probs=110.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe------eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEc
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF------EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYET 75 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf------e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl 75 (358)
.|..+++.++.+..|+ ..... ...- ........ .|...|.+++|+| ++++| ++|+.++.|++||+
T Consensus 57 ~~l~~~~~dg~i~iw~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 57 RYMLSGGSDGVIVLYDLENSSR-QSYY-----TCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF-TSSSFDKTLKVWDT 129 (408)
T ss_dssp CEEEEEETTSCEEEEECCCCSS-SSCE-----EECEEEEECTTCTTCCSSCEEEEEECTTCTTCE-EEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCcc-cceE-----eccccccccccccccCCCcEEEEEEccCCCcEE-EEEeCCCeEEEeeC
Confidence 5788999999999999 32221 1100 00111111 2778899999999 55554 67788999999999
Q ss_pred CCCceeeeeeccCceEEE------------EEeecC-------------------CCCCeeEEEEcCCCC-EEEEEeCCC
Q psy2085 76 DNLSMKFERCFDSEVVTF------------EILSDD-------------------YSSELNSIAINPVHQ-LICVGTIEG 123 (358)
Q Consensus 76 ~~lslk~~r~~d~e~v~f------------~~LS~D-------------------~s~~In~i~~np~~~-llasGs~DG 123 (358)
.+............+... ...+.| +...|++++|+|++. +|++|+.||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 130 NTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred CCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 875432221111111111 111111 226799999999987 799999999
Q ss_pred eEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|++||++++. ++..+..+.......... . ...+..+ .+++|+|++.+|++ .| .|+|||+.+++
T Consensus 210 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 210 RVKLWDVRRASGCLITLDQHNGKKSQAVES--A-NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp CEEEEETTCSSCCSEECCTTTTCSCCCTTT--S-SCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEECCCCCcccccccccccccceeecc--c-cccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 99999999876 556664332211000000 0 0000011 88999999999986 46 99999999887
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.1e-15 Score=145.32 Aligned_cols=147 Identities=14% Similarity=0.034 Sum_probs=113.2
Q ss_pred EEEeecCCceeeeeec--cCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLVII--GGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~--~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+++++.++.+..|+-. .+ ..+..+....++..|++++|+|||++| ++|+.++.|++|++.+......
T Consensus 118 ~~~~~~dg~v~iwd~~~~~~----------~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~~g~v~~~~~~~~~~~~~ 186 (450)
T 2vdu_B 118 IACADSDKSLLVFDVDKTSK----------NVLKLRKRFCFSKRPNAISIAEDDTTV-IIADKFGDVYSIDINSIPEEKF 186 (450)
T ss_dssp EEEEGGGTEEEEEEECSSSS----------SCEEEEEEEECSSCEEEEEECTTSSEE-EEEETTSEEEEEETTSCCCSSC
T ss_pred EEEECCCCeEEEEECcCCCC----------ceeeeeecccCCCCceEEEEcCCCCEE-EEEeCCCcEEEEecCCcccccc
Confidence 3677888889999832 22 234455555788999999999999987 5677899999999976432100
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCC---CCEEEEEeCCCeEEEEeCCCCceeEE-EeCCCCccccccCCCcccccc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPV---HQLICVGTIEGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKA 159 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~---~~llasGs~DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtR 159 (358)
.. ... ..+...|++|+|+|+ +.+|++|+.||+|++||+++++++.. +.+|...+
T Consensus 187 -~~--~~~------~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v------------- 244 (450)
T 2vdu_B 187 -TQ--EPI------LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFV------------- 244 (450)
T ss_dssp -CC--CCS------EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCE-------------
T ss_pred -cc--eee------ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCce-------------
Confidence 00 000 012267999999999 88999999999999999999998877 55777666
Q ss_pred CCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+ ++.+|+| .| +|+|||+.+|+
T Consensus 245 ----~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 245 ----SSICCG-KDYLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp ----EEEEEC-STTEEEEEESSSEEEEEETTTCC
T ss_pred ----EEEEEC-CCCEEEEEeCCCeEEEEECCCCc
Confidence 889999 9999997 46 99999999998
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=1.4e-15 Score=157.35 Aligned_cols=117 Identities=12% Similarity=0.142 Sum_probs=88.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+...|.+|+|||||++| |+++.++.|+|||...+-..+. |... + -+..|.+++|||++++||+|+.||
T Consensus 84 ~~~~V~~vawSPdG~~L-As~s~dg~V~iwd~~~~l~~l~-~~~~-~---------~~~sv~svafSPDG~~LAsgs~DG 151 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWM-AVLSNNGNVSVFKDNKMLTNLD-SKGN-L---------SSRTYHCFEWNPIESSIVVGNEDG 151 (588)
T ss_dssp CSCCEEEEEECSSSSCE-EEEETTSCEEEEETTEEEEECC-CSSC-S---------TTTCEEEEEECSSSSCEEEEETTS
T ss_pred CCCcEEEEEECCCCCEE-EEEeCCCcEEEEeCCceeeecc-CCCc-c---------ccccEEEEEEcCCCCEEEEEcCCC
Confidence 35679999999999987 6778999999999654111111 1100 0 003599999999999999999999
Q ss_pred eEEEEeCCCCc-------eeEEEeC----CCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKV-------KAGTLDC----AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~-------~i~~L~~----~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
+|++||+.++. .+.++.. |.+.| .+|+|+|+| .+++ .| +|++||+.++.
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V-----------------~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV-----------------THIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE-----------------EEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccE-----------------EEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 99999999886 3677743 33444 889999999 5554 67 99999998766
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=163.43 Aligned_cols=169 Identities=12% Similarity=0.109 Sum_probs=113.8
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
|..+++.|+++..|+-..+ ++++.+.+++.|++++|+|||++| ++|+.++.|++||+.+..+...+
T Consensus 71 ~L~S~s~D~~v~lWd~~~~-------------~~~~~~~~~~~V~~v~~sp~g~~l-~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQ-------------KVLTTVFVPGKITSIDTDASLDWM-LIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp EEEEEETTCEEEEEETTTC-------------SEEEEEECSSCEEEEECCTTCSEE-EEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEECcCeEEEEECCCC-------------cEEEEEcCCCCEEEEEECCCCCEE-EEEcCCCcEEEEECCCCccccce
Confidence 6788888888888882222 245666788899999999999987 57788999999999875431000
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
..... ........+.+.|++|+|+|+ ..+|++|+.||+| +||+++++++.++..+..+...........-..+..+
T Consensus 137 -i~~~~-~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~ 213 (902)
T 2oaj_A 137 -LDNLQ-KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPK 213 (902)
T ss_dssp -ECCHH-HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCC
T ss_pred -ecccc-ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCC
Confidence 00000 000000223478999999996 4799999999999 9999999999888765211000000000000000011
Q ss_pred -eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 -SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 -~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|+|+|+|.+|+| .| +|+|||..+|+
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCC
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 88999999999997 46 99999999987
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.6e-14 Score=135.48 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=111.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..+++.++.+..|+-.. ...++++.+. |...|++++|+|+ |++| ++|+.|+.|+|||+.+...
T Consensus 24 ~~l~~~~~dg~i~iw~~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 24 KRLATCSSDKTIKIFEVEG-----------ETHKLIDTLTGHEGPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp SEEEEEETTSCEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECCGGGCSEE-EEEETTSCEEEEEEETTEE
T ss_pred CEEEEEECCCcEEEEecCC-----------CcceeeeEecCCCCcEEEEEeCCCCCCCEE-EEeccCCEEEEEEcCCCce
Confidence 4778889999999998221 1124555554 7789999999988 8876 6778899999999986532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCCce--eEEEeCCCCccccccCCCccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKE 156 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~ 156 (358)
..... -..+...|++++|+|+ +.+|++|+.||+|++||++++.. ...+..|...+
T Consensus 92 ~~~~~-----------~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v---------- 150 (379)
T 3jrp_A 92 SQIAV-----------HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGV---------- 150 (379)
T ss_dssp EEEEE-----------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCE----------
T ss_pred eEeee-----------ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCce----------
Confidence 11111 1123368999999999 89999999999999999998854 34556666665
Q ss_pred cccCCCceeeEEcC-------------CCCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEE-------------EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~-------------d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+| ++..|++ .| .|+|||+.++.
T Consensus 151 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 193 (379)
T 3jrp_A 151 -------NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 193 (379)
T ss_dssp -------EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT
T ss_pred -------EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC
Confidence 7899999 6888886 46 99999998765
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.63 E-value=9.7e-15 Score=139.03 Aligned_cols=153 Identities=19% Similarity=0.218 Sum_probs=113.9
Q ss_pred eE-EEEeecCCceeeeeecc------CcccCCCcccccceeEEEE-----eeCCCCEeEEEEcCCCCEEEEEEecCCeEE
Q psy2085 4 EY-CYQTNWHKQAVTLVIIG------GRYLLPTNDIRRRIELIQD-----FEMPGVSTSVRISPDGQYVLSTGIYKPRVR 71 (358)
Q Consensus 4 ~~-~~~~~~~~~~~~~~~~~------~r~lk~d~~~~~rIeliqd-----fe~~~~v~~v~~SpDG~~LlatG~~d~~Ir 71 (358)
.+ .++++.++.+..|+-.. .+.++-.+ .. .++. -.+...+.+++|+|+| + +++|+.++.|+
T Consensus 138 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~i~ 210 (397)
T 1sq9_A 138 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP----TL-ELQGTVESPMTPSQFATSVDISERG-L-IATGFNNGTVQ 210 (397)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC----EE-EEEEEECCSSSSCCCCCEEEECTTS-E-EEEECTTSEEE
T ss_pred ceEEEEEeCCCcEEEEeCCccccccccceeeccC----cc-eeeeeeccccCCCCCceEEEECCCc-e-EEEEeCCCcEE
Confidence 46 78899999999999322 22222111 00 1111 2357789999999999 5 47788999999
Q ss_pred EEEcCCCceeeeeeccCceEEEEEeecCC---CCCeeEEEEcCCCCEEEEEeCC---CeEEEEeCCCCceeEEEeC----
Q psy2085 72 CYETDNLSMKFERCFDSEVVTFEILSDDY---SSELNSIAINPVHQLICVGTIE---GKVEAWDPRMKVKAGTLDC---- 141 (358)
Q Consensus 72 vwDl~~lslk~~r~~d~e~v~f~~LS~D~---s~~In~i~~np~~~llasGs~D---GtV~iWD~Rs~~~i~~L~~---- 141 (358)
+||+.+..... .. . ...++ ...|++++|+|++.+|++|+.| |.|++||+++++++..+..
T Consensus 211 i~d~~~~~~~~--~~-------~-~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~ 280 (397)
T 1sq9_A 211 ISELSTLRPLY--NF-------E-SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 280 (397)
T ss_dssp EEETTTTEEEE--EE-------E-CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEECCCCceeE--EE-------e-ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc
Confidence 99998643211 11 0 00112 3689999999999999999999 9999999999999999987
Q ss_pred ---------CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 142 ---------AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 142 ---------~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|...+ .++.|+|++++|++ .| .|+|||+.+++
T Consensus 281 ~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 281 SQASLGEFAHSSWV-----------------MSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp -----CCBSBSSCE-----------------EEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred ccccccccccCCcE-----------------EEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 55555 88999999999997 46 99999999987
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=9.8e-15 Score=136.17 Aligned_cols=147 Identities=7% Similarity=-0.023 Sum_probs=108.4
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC---CCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP---DGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp---DG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++++.++.+..|+-... +++....++..+.+++|+| +|.+| ++|+.++.|++||+.+...
T Consensus 181 ~~l~~~~~d~~i~i~d~~~~-------------~~~~~~~~~~~v~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 181 RVVCAGYDNGDIKLFDLRNM-------------ALRWETNIKNGVCSLEFDRKDISMNKL-VATSLEGKFHVFDMRTQHP 246 (357)
T ss_dssp CEEEEEETTSEEEEEETTTT-------------EEEEEEECSSCEEEEEESCSSSSCCEE-EEEESTTEEEEEEEEEEET
T ss_pred CEEEEEccCCeEEEEECccC-------------ceeeecCCCCceEEEEcCCCCCCCCEE-EEECCCCeEEEEeCcCCCc
Confidence 46778888889999983221 1344466788999999999 99987 5677899999999875321
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-------------------eeEEEe
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKV-------------------KAGTLD 140 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~-------------------~i~~L~ 140 (358)
. ....+..+ ..+...|++++|+|++. +|++|+.||.|++||++++. ++..+.
T Consensus 247 ~-------~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 318 (357)
T 3i2n_A 247 T-------KGFASVSE-KAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT 318 (357)
T ss_dssp T-------TEEEEEEE-ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE
T ss_pred c-------cceeeecc-CCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccc
Confidence 1 01111111 12337899999999998 89999999999999998653 445556
Q ss_pred CCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCC
Q psy2085 141 CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIK 189 (358)
Q Consensus 141 ~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG 189 (358)
+|...+ .+++|+|+++.|+ | .| .|+|||+.++
T Consensus 319 ~~~~~v-----------------~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 319 LSTQPI-----------------SSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp CCSSCE-----------------EEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred cCCCCe-----------------eEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 665555 8899999999887 5 36 9999999865
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=4e-15 Score=138.81 Aligned_cols=126 Identities=10% Similarity=0.143 Sum_probs=97.6
Q ss_pred ceeEEEEe-eCCCCEeEEEEcCC---CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 35 RIELIQDF-EMPGVSTSVRISPD---GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 35 rIeliqdf-e~~~~v~~v~~SpD---G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..+.++.+ .|.+.|++++|+|+ |++| ++|+.++.|+|||+.+........ + ..+...|++++|+
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l-~~~~~dg~i~iw~~~~~~~~~~~~---------~--~~h~~~v~~~~~~ 95 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFL-IAGSWANDVRCWEVQDSGQTIPKA---------Q--QMHTGPVLDVCWS 95 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEE-EEEETTSEEEEEEECTTSCEEEEE---------E--EECSSCEEEEEEC
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEE-EEECCCCcEEEEEcCCCCceeEEE---------e--ccccCCEEEEEEC
Confidence 34455555 37789999999999 5765 678889999999998632211111 0 1123689999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEE--cCCCCEEEE--ec-ceEEEE
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE--EEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f--s~d~~~llS--aD-~IKIWD 185 (358)
|++++|++|+.||+|++||+++++.+.. ..|...+ .++.| +|++.+|++ .| .|+|||
T Consensus 96 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 96 DDGSKVFTASCDKTAKMWDLSSNQAIQI-AQHDAPV-----------------KTIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCE-----------------EEEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred cCCCEEEEEcCCCcEEEEEcCCCCceee-ccccCce-----------------EEEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 9999999999999999999999987764 4455555 78999 889988886 46 999999
Q ss_pred CCCCc
Q psy2085 186 KEIKK 190 (358)
Q Consensus 186 ~~tG~ 190 (358)
+.+++
T Consensus 158 ~~~~~ 162 (368)
T 3mmy_A 158 TRSSN 162 (368)
T ss_dssp SSCSS
T ss_pred CCCCc
Confidence 99887
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=142.69 Aligned_cols=150 Identities=19% Similarity=0.208 Sum_probs=112.9
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~ 82 (358)
+..+++.++.+..|.-..... ....+.....+ .|...|.+++|+|++..++++|+.++.|+|||+.+.. .+.
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPK------EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCB------GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSC
T ss_pred eEEEEeCCCeEEEEeCCCCCC------CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcc
Confidence 788899999999999222110 11223334455 4778899999999666677888899999999998642 110
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
...+ ..+...|++|+|+|++. +|++|+.||+|++||+|+ +.++.++..|...+
T Consensus 270 -------~~~~----~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v-------------- 324 (430)
T 2xyi_A 270 -------SHTV----DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI-------------- 324 (430)
T ss_dssp -------SEEE----ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE--------------
T ss_pred -------eeEe----ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE--------------
Confidence 0011 12236899999999886 899999999999999998 56788998887776
Q ss_pred CCceeeEEcCCCC-EEEE--ec-ceEEEECCC
Q psy2085 161 SDESSEEEEEEEE-EEES--SD-DDQAWTKEI 188 (358)
Q Consensus 161 ~~P~sI~fs~d~~-~llS--aD-~IKIWD~~t 188 (358)
.+|+|+|++. .|+| .| .|+|||+.+
T Consensus 325 ---~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 325 ---FQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ---EEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ---EEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 8899999996 4665 47 999999986
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.2e-15 Score=141.76 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=109.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEE-----EEeeCCCCEeEEEEcCCC-CEEEEEEecCCeEEEEEcC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELI-----QDFEMPGVSTSVRISPDG-QYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeli-----qdfe~~~~v~~v~~SpDG-~~LlatG~~d~~IrvwDl~ 76 (358)
.+..++ .|+.+..|+ ....+.+ .++ .--.|...|++++|+|+| ++ +++|+.++.|+|||+.
T Consensus 190 ~~l~s~-~d~~i~iwd~~~~~~~~----------~~~~~~~~~~~~~~~~v~~~~~~p~~~~~-l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 190 ETYLSA-DDLRINLWHLEITDRSF----------NIVDIKPANMEELTEVITAAEFHPNSCNT-FVYSSSKGTIRLCDMR 257 (447)
T ss_dssp SEEEEE-CSSEEEEEETTEEEEEE----------EEEECCCSSGGGCCCCEEEEEECSSCTTE-EEEEETTSCEEEEETT
T ss_pred CEEEEe-CCCeEEEEECCCCCcee----------eeeecccccccccCcceEEEEECCCCCcE-EEEEeCCCeEEEEECc
Confidence 355666 789999998 3222111 111 111467889999999999 65 5788899999999998
Q ss_pred CCce-----e-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC-CceeEEEeCCCCcccc-
Q psy2085 77 NLSM-----K-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISN- 148 (358)
Q Consensus 77 ~lsl-----k-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~- 148 (358)
+... + +..+.+.... . .-..+...|++++|+|++.+|++|+. |+|++||+++ ++++.++.+|......
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNR--S-FFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp TCSSSCTTCEEECCC-----C--C-HHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred CCccccceeeEeccCCCcccc--c-cccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 7542 1 1111100000 0 00001137999999999999999999 9999999998 8888889887543210
Q ss_pred --------ccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 149 --------ERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 149 --------~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+.+ .+++|+|++.+|++ .| .|+|||+.+|+.
T Consensus 334 ~~~~~~~~i~~~-----------~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 334 CSLYENDCIFDK-----------FECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHHTSGGGCC-----------CCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred cccccccccccc-----------eEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 0111 45999999999997 46 999999999883
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-14 Score=136.39 Aligned_cols=153 Identities=8% Similarity=-0.037 Sum_probs=113.0
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe--eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF--EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf--e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++++.++.+..|+ .... ...++..+ .|...+.+++|+|+|++| ++|+.++.|++||+....+
T Consensus 109 ~~l~~~~~d~~v~i~d~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~ 176 (372)
T 1k8k_C 109 KKFAVGSGSRVISICYFEQEN-----------DWWVCKHIKKPIRSTVLSLDWHPNSVLL-AAGSCDFKCRIFSAYIKEV 176 (372)
T ss_dssp SEEEEEETTSSEEEEEEETTT-----------TEEEEEEECTTCCSCEEEEEECTTSSEE-EEEETTSCEEEEECCCTTT
T ss_pred CEEEEEeCCCEEEEEEecCCC-----------cceeeeeeecccCCCeeEEEEcCCCCEE-EEEcCCCCEEEEEcccccc
Confidence 4677888899999998 3221 11222233 367889999999999976 5677899999999753211
Q ss_pred eee-------e-eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCC
Q psy2085 81 KFE-------R-CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDT 152 (358)
Q Consensus 81 k~~-------r-~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i 152 (358)
... . ......+ ..+ ..+...|++++|+|++.+|++|+.||+|++||+++++++..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v------ 247 (372)
T 1k8k_C 177 EERPAPTPWGSKMPFGELM--FES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL------ 247 (372)
T ss_dssp SCCCCCBTTBSCCCTTCEE--EEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCE------
T ss_pred cccccccccccccchhhhe--Eec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCe------
Confidence 000 0 0000111 111 1333689999999999999999999999999999999999999887766
Q ss_pred CccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 153 EEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
.+++|+|++.+|++ .| .|+|||..+
T Consensus 248 -----------~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 248 -----------LAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp -----------EEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred -----------EEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 78999999998887 56 999999988
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-14 Score=138.47 Aligned_cols=135 Identities=10% Similarity=0.006 Sum_probs=98.9
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCC-CEEEEEEecCCeEEEEEcCCCceeeeee---ccCceEEEEEeec-----------
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDG-QYVLSTGIYKPRVRCYETDNLSMKFERC---FDSEVVTFEILSD----------- 98 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG-~~LlatG~~d~~IrvwDl~~lslk~~r~---~d~e~v~f~~LS~----------- 98 (358)
..++++.+. |...|++++|+|+| ++| ++|+.++.|+|||+.+........ ....+ ....+++
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~l~s~~~ 139 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTV-AVGSKGGDIILWDYDVQNKTSFIQGMGPGDAI-TGMKFNQFNTNQLFVSSI 139 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEE-EEEEBTSCEEEEETTSTTCEEEECCCSTTCBE-EEEEEETTEEEEEEEEET
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEE-EEEcCCCeEEEEeCCCcccceeeecCCcCCce-eEEEeCCCCCCEEEEEeC
Confidence 456666664 78899999999999 655 778889999999998654332211 11222 1112222
Q ss_pred CCC---------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCcccc
Q psy2085 99 DYS---------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 99 D~s---------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
|.+ ..|.+++|+|++.+|++|+.||+|++||+ +++++..+..|...+
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v----------- 207 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV----------- 207 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE-----------
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE-----------
Confidence 111 44888889988888888888999999998 466778888777766
Q ss_pred ccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCC
Q psy2085 158 KASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|+++ .|++ .| +|+|||+.++
T Consensus 208 ------~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 208 ------THAEFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp ------EEEEECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred ------EEEEECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 8899999998 7776 46 9999999983
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.7e-15 Score=144.93 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=104.8
Q ss_pred ecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeeeeec
Q psy2085 10 NWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFERCF 86 (358)
Q Consensus 10 ~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~r~~ 86 (358)
+.++.+..|+ ..... .++++.+.++..|++++|+|||++| ++|+.++.|+|||+.... .+....
T Consensus 42 ~~d~~v~iw~~~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~vw~~~~~~~~~~~~~~- 108 (416)
T 2pm9_A 42 STDSSLELWSLLAADS-----------EKPIASLQVDSKFNDLDWSHNNKII-AGALDNGSLELYSTNEANNAINSMAR- 108 (416)
T ss_dssp CCCCCCEEEESSSGGG-----------CSCSCCCCCSSCEEEEEECSSSSCE-EEEESSSCEEEECCSSTTSCCCEEEE-
T ss_pred CCCCeEEEEEccCCCC-----------CcEEEEEecCCceEEEEECCCCCeE-EEEccCCeEEEeecccccccccchhh-
Confidence 7888999999 32221 1344455678899999999999987 567789999999998621 111111
Q ss_pred cCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeEEEEeCCCCc------eeEEE---eCCCCccccccCCCccc
Q psy2085 87 DSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKVEAWDPRMKV------KAGTL---DCAFNCISNERDTEEKE 156 (358)
Q Consensus 87 d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV~iWD~Rs~~------~i~~L---~~~~~~v~~~~~i~gl~ 156 (358)
+ ..+...|++++|+|+ +.+|++|+.||+|++||++++. ....+ ..|...+
T Consensus 109 ---------~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v---------- 168 (416)
T 2pm9_A 109 ---------F-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV---------- 168 (416)
T ss_dssp ---------C-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC----------
T ss_pred ---------c-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe----------
Confidence 1 123368999999998 8999999999999999999886 32222 3344444
Q ss_pred cccCCCceeeEEcCC-CCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GKASSDESSEEEEEE-EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 GtRs~~P~sI~fs~d-~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+++|+|+ +..|++ .| .|+|||+.+++
T Consensus 169 -------~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 199 (416)
T 2pm9_A 169 -------ISLAWNQSLAHVFASAGSSNFASIWDLKAKK 199 (416)
T ss_dssp -------CEEEECSSCTTEEEEESSSSCEEEEETTTTE
T ss_pred -------eEEEeCCCCCcEEEEEcCCCCEEEEECCCCC
Confidence 78999999 677777 46 99999999887
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3.6e-14 Score=130.94 Aligned_cols=137 Identities=9% Similarity=0.102 Sum_probs=108.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.+.++++.++.+..|+.... ++++.+.++..+.+++|+|||++| ++|+.++.|++||+.+......
T Consensus 196 ~~l~~~~~dg~i~~~d~~~~-------------~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 196 TKLWTGGLDNTVRSWDLREG-------------RQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp SEEEEEETTSEEEEEETTTT-------------EEEEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEETTSSCEEEE
T ss_pred CEEEEEecCCcEEEEECCCC-------------ceEeeecCCCceEEEEECCCCCEE-EEEcCCCcEEEEECCCCCeEEE
Confidence 36778888888999983222 345566788899999999999987 5667899999999986532110
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
..+...|.+++|+|++++|++|+.||+|++||+++++.+..+. +...+
T Consensus 262 --------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v----------------- 309 (337)
T 1gxr_A 262 --------------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSV----------------- 309 (337)
T ss_dssp --------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCE-----------------
T ss_pred --------------cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEec-CCCcE-----------------
Confidence 1223679999999999999999999999999999998885554 33444
Q ss_pred eeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 164 SSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 164 ~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
.++.|+|++++|++ .| .|+|||+
T Consensus 310 ~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 310 LSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEE
Confidence 78999999999986 46 9999996
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-14 Score=132.11 Aligned_cols=170 Identities=12% Similarity=0.019 Sum_probs=104.1
Q ss_pred EEEEeecC-----Cceeeee-eccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcC
Q psy2085 5 YCYQTNWH-----KQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETD 76 (358)
Q Consensus 5 ~~~~~~~~-----~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~ 76 (358)
|.+.++.+ +.+..|+ ........-.......+..+. .+++ .+.+++|+|+|++| ++|+.++.|++||+.
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l-~~~~~dg~i~i~d~~ 205 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII--THEGLDAATVAGWSTKGKYI-IAGHKDGKISKYDVS 205 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE--CCTTCCCEEEEEECGGGCEE-EEEETTSEEEEEETT
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc--CCcCccceeEEEEcCCCCEE-EEEcCCCEEEEEECC
Confidence 55566666 7888888 322211111111111222222 2333 89999999999987 567789999999998
Q ss_pred CC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC--CC--------Cc
Q psy2085 77 NL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC--AF--------NC 145 (358)
Q Consensus 77 ~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~--~~--------~~ 145 (358)
+. .... . + ..+...|.+++|+|++.+|++|+.||.|++||+++++.+..+.. .. ..
T Consensus 206 ~~~~~~~--~----------~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 206 NNYEYVD--S----------I-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKE 272 (369)
T ss_dssp TTTEEEE--E----------E-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSS
T ss_pred CCcEeEE--E----------E-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCc
Confidence 62 2111 0 0 11226789999999999999999999999999998887655531 10 00
Q ss_pred -cccccCCCc--------------cc------cc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 146 -ISNERDTEE--------------KE------GK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 146 -v~~~~~i~g--------------l~------Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.......+ +. |. .+..+ .+++|+|++++|+| .| .|+|||+.++.
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcccc
Confidence 000000000 00 11 01112 88999999999997 46 99999998654
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.62 E-value=3e-14 Score=132.98 Aligned_cols=107 Identities=9% Similarity=0.039 Sum_probs=80.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|.++++.++.+..|+.... ++++.+. |...|++++|+| +|++| ++|+.+++|+|||+.+....
T Consensus 86 ~~l~~~~~dg~i~v~d~~~~-------------~~~~~~~~~~~~i~~~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~ 151 (366)
T 3k26_A 86 PLLAVAGSRGIIRIINPITM-------------QCIKHYVGHGNAINELKFHPRDPNLL-LSVSKDHALRLWNIQTDTLV 151 (366)
T ss_dssp EEEEEEETTCEEEEECTTTC-------------CEEEEEESCCSCEEEEEECSSCTTEE-EEEETTSCEEEEETTTTEEE
T ss_pred CEEEEecCCCEEEEEEchhc-------------eEeeeecCCCCcEEEEEECCCCCCEE-EEEeCCCeEEEEEeecCeEE
Confidence 47888999999999983221 2344554 888999999999 88866 67788999999999865322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
..... ...+...|.+++|+|++.+|++|+.||+|++||+++++
T Consensus 152 ~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 152 AIFGG----------VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEECS----------TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred EEecc----------cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 11100 01233679999999999999999999999999998654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.62 E-value=4.4e-14 Score=138.35 Aligned_cols=159 Identities=16% Similarity=0.217 Sum_probs=103.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.|+++..|+-... ++++.+. |.+.|.+++|+|++ ++++|+.|++|+|||+.+.....
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~-------------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~~~~ 197 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINK-------------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGCCTH 197 (464)
T ss_dssp TEEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCcEEEEECCCC-------------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCcEEE
Confidence 47889999999999993222 2445554 88999999999999 45788899999999998653221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEc--CCCCEEEEEeCCCeEEEEeCCCCce-----------------------eE
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAIN--PVHQLICVGTIEGKVEAWDPRMKVK-----------------------AG 137 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~n--p~~~llasGs~DGtV~iWD~Rs~~~-----------------------i~ 137 (358)
. . ..+.+.|++++|+ |++.+|++|+.||+|++||++++.. +.
T Consensus 198 ~--~-----------~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 198 V--F-----------EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp E--E-----------CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred E--E-----------CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 1 0 1122556666666 3556677777777777777665542 33
Q ss_pred EEeCCCCccccc---------cCCCcc-c------cc-----c-CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 138 TLDCAFNCISNE---------RDTEEK-E------GK-----A-SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~~~~v~~~---------~~i~gl-~------Gt-----R-s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+.+|...+... ...++. . |. . +..+ .++.|+|+++.|++ .| +|+|||+.+|+
T Consensus 265 ~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 265 VLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp EECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred EccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 444554443211 000100 0 11 0 1111 88999999999997 46 99999999988
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.62 E-value=6.8e-15 Score=147.65 Aligned_cols=143 Identities=13% Similarity=0.172 Sum_probs=108.6
Q ss_pred eEEEEeec-CCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNW-HKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~-~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+...++. ++.+..|+-...+ +.. +.+ .|...|++++|||||++| ++|+.++.|+|||+.+....
T Consensus 457 ~~l~~~~~~d~~i~~~~~~~~~-----------~~~-~~~~~~~~~v~~~~~s~~g~~l-~~~~~dg~i~iw~~~~~~~~ 523 (615)
T 1pgu_A 457 NYVAVGLEEGNTIQVFKLSDLE-----------VSF-DLKTPLRAKPSYISISPSETYI-AAGDVMGKILLYDLQSREVK 523 (615)
T ss_dssp SEEEEEETTTSCEEEEETTEEE-----------EEE-ECSSCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEE
T ss_pred CEEEEeecCCCeEEEEECCCcc-----------ccc-cccCCccCceEEEEECCCCCEE-EEcCCCCeEEEeeCCCCcce
Confidence 45666777 8888888822110 111 222 367889999999999987 56778999999999875332
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC----------CCCEEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCcccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP----------VHQLICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNER 150 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np----------~~~llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~ 150 (358)
. .. ...+...|++++|+| ++.+||+|+.||+|++||+.++ +++..+.+|...+
T Consensus 524 ~--~~----------~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v---- 587 (615)
T 1pgu_A 524 T--SR----------WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV---- 587 (615)
T ss_dssp E--CC----------SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE----
T ss_pred e--Ee----------ecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccce----
Confidence 1 11 001236899999999 9999999999999999999998 7888888888777
Q ss_pred CCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 151 DTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 151 ~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.+|+|+|++. |+| .| +|+|||+.++
T Consensus 588 -------------~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 588 -------------NNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp -------------EEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred -------------EEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 8899999999 886 46 9999998753
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.62 E-value=4.8e-15 Score=144.32 Aligned_cols=165 Identities=7% Similarity=-0.030 Sum_probs=101.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcC--------CCCEEEEEEecCCeEEEEE
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISP--------DGQYVLSTGIYKPRVRCYE 74 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~Sp--------DG~~LlatG~~d~~IrvwD 74 (358)
.++-++|.|+++..|+-..+. .....++..+. |.+.|++|+|+| ||++| |||+.|++|+|||
T Consensus 102 ~~las~~~d~~v~lw~~~~~~--------~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~l-as~s~D~tv~~Wd 172 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNET--------IITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVI-ASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTE--------EEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEE-EEEETTSEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCc--------cceeeeecccCCCCCceEEEEEccccccccCCCCCEE-EEEECCCeEEEEE
Confidence 367889999999999932220 00112233333 778999999998 88765 7888999999999
Q ss_pred cCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc-cccCC
Q psy2085 75 TDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS-NERDT 152 (358)
Q Consensus 75 l~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~-~~~~i 152 (358)
+.+..... .+ + .+...|.+|+|+|++. +|++|+.||+|++||+++++....+..+..... ..+..
T Consensus 173 ~~~~~~~~---------~~--~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 173 LTDEGPIL---------AG--Y--PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EETTEEEE---------EE--E--ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred CCCCceee---------ee--c--CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 97542110 00 1 1126789999999874 899999999999999999987655543221110 00000
Q ss_pred Cc--cc--cc--cCCCc-eeeEEc-CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 153 EE--KE--GK--ASSDE-SSEEEE-EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~g--l~--Gt--Rs~~P-~sI~fs-~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.. .. .. .+... .++.|+ +++..|++ .| +++|||+.+++
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 00 00 00 01111 678886 79999997 46 99999998776
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.7e-15 Score=139.20 Aligned_cols=136 Identities=10% Similarity=0.115 Sum_probs=101.2
Q ss_pred ccceeEEEEeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEc----CCCceeeeeeccCceEEEEE-ee-----cCCC
Q psy2085 33 RRRIELIQDFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYET----DNLSMKFERCFDSEVVTFEI-LS-----DDYS 101 (358)
Q Consensus 33 ~~rIeliqdfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl----~~lslk~~r~~d~e~v~f~~-LS-----~D~s 101 (358)
+..+..++...+.+.|++++|+|||+ +| ++|+.++.|+|||+ .+....+.-. ....+.. +. ..+.
T Consensus 33 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 108 (425)
T 1r5m_A 33 DGFVKILKEIVKLDNIVSSTWNPLDESIL-AYGEKNSVARLARIVETDQEGKKYWKLT---IIAELRHPFALSASSGKTT 108 (425)
T ss_dssp -CCCEECEEEEECSCCSEEEECSSCTTEE-EEEETBTEEEEEEEEEC------CEEEE---EEEEEECCCCCC------C
T ss_pred hhhhhheeeeeccCceEEEEECCCCCcEE-EEecCCceEEEEEEecccCCcccccccc---ccccccccccccccccCCC
Confidence 44566777778889999999999999 66 67888999999999 6543100000 0000000 00 0122
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD 179 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD 179 (358)
+.|++++|+|++.+|++|+.||+|.+|| .++..+..+..|...+ .++.|+|++++|++ .|
T Consensus 109 ~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d 170 (425)
T 1r5m_A 109 NQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPI-----------------VSVKWNKDGTHIISMDVE 170 (425)
T ss_dssp BCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCE-----------------EEEEECTTSSEEEEEETT
T ss_pred CceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccE-----------------EEEEECCCCCEEEEEecC
Confidence 5899999999999999999999999999 6788888998887776 88999999999987 46
Q ss_pred -ceEEEECCCCc
Q psy2085 180 -DDQAWTKEIKK 190 (358)
Q Consensus 180 -~IKIWD~~tG~ 190 (358)
.|++||+.+++
T Consensus 171 ~~i~iwd~~~~~ 182 (425)
T 1r5m_A 171 NVTILWNVISGT 182 (425)
T ss_dssp CCEEEEETTTTE
T ss_pred CeEEEEECCCCc
Confidence 99999999887
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.61 E-value=5.4e-15 Score=140.37 Aligned_cols=154 Identities=7% Similarity=-0.051 Sum_probs=108.8
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEee--CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE--MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe--~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.+.++++.++.+..|+ .... ...+++.+. |...|++++|+|||++| ++|+.++.|++||+....+
T Consensus 113 ~~l~~~~~d~~i~iwd~~~~~-----------~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~~~~~d~~i~iwd~~~~~~ 180 (377)
T 3dwl_C 113 DKFAVGSGARVISVCYFEQEN-----------DWWVSKHLKRPLRSTILSLDWHPNNVLL-AAGCADRKAYVLSAYVRDV 180 (377)
T ss_dssp SCCEEEESSSCEEECCC----------------CCCCEEECSSCCSCEEEEEECTTSSEE-EEEESSSCEEEEEECCSSC
T ss_pred CEEEEEecCCeEEEEEECCcc-----------cceeeeEeecccCCCeEEEEEcCCCCEE-EEEeCCCEEEEEEEEeccc
Confidence 3567888889999998 3221 112333443 67889999999999976 6778899999999964321
Q ss_pred eeeeec--c-C--ceEE-EEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce----eEEEeCCCCcccccc
Q psy2085 81 KFERCF--D-S--EVVT-FEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK----AGTLDCAFNCISNER 150 (358)
Q Consensus 81 k~~r~~--d-~--e~v~-f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~----i~~L~~~~~~v~~~~ 150 (358)
...... . . ..-. ...+ .+...|++++|+|++++|++|+.||+|++||++++.+ +.++.+|...+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v---- 254 (377)
T 3dwl_C 181 DAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL---- 254 (377)
T ss_dssp C-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE----
T ss_pred CCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce----
Confidence 110000 0 0 0000 1111 4447899999999999999999999999999999987 78888887776
Q ss_pred CCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCC
Q psy2085 151 DTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEI 188 (358)
Q Consensus 151 ~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~t 188 (358)
.++.|+|++.+|+++ | .+.+|+...
T Consensus 255 -------------~~~~~s~~~~~l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 255 -------------RSLLWANESAIVAAGYNYSPILLQGNE 281 (377)
T ss_dssp -------------EEEEEEETTEEEEEESSSSEEEECCCC
T ss_pred -------------EEEEEcCCCCEEEEEcCCcEEEEEeCC
Confidence 889999999999874 5 666887764
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-15 Score=150.76 Aligned_cols=154 Identities=10% Similarity=-0.048 Sum_probs=108.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..++|.|+++..|+-.......... . .-.+.+..+ .+...|++++|+|++ . +++|+.|++|++||+.+....
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~~~~~~~-~-~~~~p~~~l~~h~~~v~sv~~s~~~-~-lasgs~DgtV~lWD~~~~~~~- 300 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNATDVHVF-K-MCEKPSLTLSLADSLITTFDFLSPT-T-VVCGFKNGFVAEFDLTDPEVP- 300 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSSEE-E-CCCSCSEEECCTTTCEEEEEESSSS-E-EEEEETTSEEEEEETTBCSSC-
T ss_pred ceEEEEecCCeEEEEEcCCCccccccc-e-eecCceEEEEcCCCCEEEEEecCCC-e-EEEEeCCCEEEEEECCCCCCc-
Confidence 478899999999999922111100000 0 000112233 366889999999976 4 578999999999999853210
Q ss_pred eeeccCceEEEEEeecCCCCCeeEE--EEcCCC-CEEEEEeCCCeEEEEeCCCCceeEEEeCCCC--ccccccCCCcccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSI--AINPVH-QLICVGTIEGKVEAWDPRMKVKAGTLDCAFN--CISNERDTEEKEG 157 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i--~~np~~-~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~--~v~~~~~i~gl~G 157 (358)
...+ ..++..|++| +|+|++ ++|||||.||+|++||+|+++++.++.+|.. .+
T Consensus 301 -------~~~~----~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v----------- 358 (524)
T 2j04_B 301 -------SFYD----QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL----------- 358 (524)
T ss_dssp -------SEEE----ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC-----------
T ss_pred -------eEEe----ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc-----------
Confidence 0000 1223679999 568887 8999999999999999999988877776543 12
Q ss_pred ccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
.+|+|+|++..++++ | +|+|||++++.
T Consensus 359 ------~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 359 ------VPVVYCPQIYSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp ------CCEEEETTTTEEEEECSSSEEEEEETTCTT
T ss_pred ------cceEeCCCcCeEEEeCCCCcEEEEECcccc
Confidence 679999999988873 5 99999999876
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.61 E-value=3.2e-15 Score=148.95 Aligned_cols=130 Identities=11% Similarity=0.093 Sum_probs=96.2
Q ss_pred EeeCCCCEeEEEEcCCCCEEEE---EEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEE
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLS---TGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLI 116 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~Lla---tG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~ll 116 (358)
.+.+++.|++++|+|||++|++ +|+.+++|+|||+.+......+ ....+........|...|++|+|+|+ +.+|
T Consensus 88 ~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~--~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ--QKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS--SCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred cccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC--CcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 3556788999999999999876 7888999999998643000000 00000001111223368999999998 7899
Q ss_pred EEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 117 CVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|+.||+|++||++++..+....+|...+ .+++|+|+|++|++ .| +|+|||.+ |+
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v-----------------~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAV-----------------TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCE-----------------EEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCce-----------------eEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 999999999999999997766666665555 88999999999986 46 99999998 54
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.61 E-value=2.9e-14 Score=135.55 Aligned_cols=154 Identities=12% Similarity=0.082 Sum_probs=113.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.++.+..|+. .. ++++.+. |...|.+++|+|+|++|+ +|+.++.|++||+.+.....
T Consensus 121 ~~l~~~~~dg~i~i~~~-~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNK-TG-------------ALLNVLNFHRAPIVSVKWNKDGTHII-SMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp SEEEEEETTSCEEEEET-TS-------------CEEEEECCCCSCEEEEEECTTSSEEE-EEETTCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEeC-CC-------------CeeeeccCCCccEEEEEECCCCCEEE-EEecCCeEEEEECCCCcEEE
Confidence 46778888888888871 11 2333443 778899999999999875 66789999999998653321
Q ss_pred eeeccCc----------------eE--E------EEEee-------------------cCCCCCeeEEEEcCCCCEEEEE
Q psy2085 83 ERCFDSE----------------VV--T------FEILS-------------------DDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 83 ~r~~d~e----------------~v--~------f~~LS-------------------~D~s~~In~i~~np~~~llasG 119 (358)
....... +. . +...+ ..+...|++++|+|++.+|++|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 1110000 00 0 00000 1123689999999999999999
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+.||+|++||+++++.+..+..|...+ .++.|+|++ .|++ .| .|+|||+.+++
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i-----------------~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSI-----------------VSASWVGDD-KVISCSMDGSVRLWSLKQNT 321 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCE-----------------EEEEEETTT-EEEEEETTSEEEEEETTTTE
T ss_pred cCCCEEEEEECCCCccceEecCCCccE-----------------EEEEECCCC-EEEEEeCCCcEEEEECCCCc
Confidence 999999999999999999998777766 789999999 7775 46 99999999887
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.61 E-value=9.3e-15 Score=136.30 Aligned_cols=119 Identities=13% Similarity=0.212 Sum_probs=96.3
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEec---CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC---CCEE
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIY---KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV---HQLI 116 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~---d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~---~~ll 116 (358)
.|...|.+++|+|+|..++++|+. ++.|+|||+.+........ + .+...|++++|+|+ +.+|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~----------~--~~~~~v~~~~~~~~~~~~~~l 83 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE----------I--EKAKPIKCGTFGATSLQQRYL 83 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE----------E--EESSCEEEEECTTCCTTTCCE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee----------e--cccCcEEEEEEcCCCCCCceE
Confidence 388999999999999989889887 8999999998654321111 0 11268999999998 6999
Q ss_pred EEEeCCCeEEEEeCCCCc-eeEEEeCCCCccccccCCCccccccCCCceee------EEcCCCCEEEE--ec-ceEEEEC
Q psy2085 117 CVGTIEGKVEAWDPRMKV-KAGTLDCAFNCISNERDTEEKEGKASSDESSE------EEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs~~-~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI------~fs~d~~~llS--aD-~IKIWD~ 186 (358)
++|+.||+|++||++++. ++..+.+|...+ .++ +|+|+++.|++ .| .|+|||+
T Consensus 84 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~ 146 (357)
T 3i2n_A 84 ATGDFGGNLHIWNLEAPEMPVYSVKGHKEII-----------------NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDP 146 (357)
T ss_dssp EEEETTSCEEEECTTSCSSCSEEECCCSSCE-----------------EEEEEESGGGCC-CCCEEEEEETTSCEEEECT
T ss_pred EEecCCCeEEEEeCCCCCccEEEEEecccce-----------------EEEeeccccccCCCccEEEEEeCCCeEEEEeC
Confidence 999999999999999988 888998888776 556 45789999997 46 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.+++
T Consensus 147 ~~~~ 150 (357)
T 3i2n_A 147 RQKD 150 (357)
T ss_dssp TSCS
T ss_pred CCCC
Confidence 9876
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=152.01 Aligned_cols=138 Identities=14% Similarity=0.197 Sum_probs=85.1
Q ss_pred ceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC------------
Q psy2085 35 RIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS------------ 101 (358)
Q Consensus 35 rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s------------ 101 (358)
|+++.+.|. |++.|.+++|||||++| ++|+.++.|+|||+.+......-..+...+....++++..
T Consensus 2 ~l~~~~~~~~h~~~v~~i~~sp~~~~l-a~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 2 KLDIKKTFSNRSDRVKGIDFHPTEPWV-LTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCCCEEEEEEECSCEEEEEECSSSSEE-EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred CcccceeeecCCCceEEEEECCCCCEE-EEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 345566665 88999999999999987 5677899999999987533211111111111111111111
Q ss_pred -----------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC-ceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 102 -----------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMK-VKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 102 -----------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~-~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.|.+++|+|++++|++|+.||+|++||++++ .....+.+|...+
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v----------------- 143 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV----------------- 143 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE-----------------
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE-----------------
Confidence 34555555555555555555555555555544 3344444444443
Q ss_pred eeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 164 SSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+| ++..|++ .| +|++||+.+++
T Consensus 144 ~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 144 MCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 8899999 7878886 46 99999998776
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.1e-14 Score=143.16 Aligned_cols=122 Identities=10% Similarity=-0.009 Sum_probs=89.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI 121 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~ 121 (358)
.|...|+||+|+|++..++|+|+.|++|+|||+......... -...|++.|++|+|+| ++.+|+|||.
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~-----------~~~gH~~~V~~l~f~p~~~~~l~s~s~ 185 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFI-----------KGIGAGGSITGLKFNPLNTNQFYASSM 185 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEE-----------CCCSSSCCCCEEEECSSCTTEEEEECS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEE-----------EccCCCCCEEEEEEeCCCCCEEEEEeC
Confidence 366789999999965556689999999999999754321110 0123447899999998 5789999999
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
||+|++||++++........+...+. + .++.|+|++.+|+++ | +|+|||+....
T Consensus 186 D~~v~iwd~~~~~~~~~~~~~~~~~~----~-----------~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 186 EGTTRLQDFKGNILRVFASSDTINIW----F-----------CSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp SSCEEEEETTSCEEEEEECCSSCSCC----C-----------CCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred CCEEEEeeccCCceeEEeccCCCCcc----E-----------EEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 99999999987654333332222111 1 679999999999974 5 99999987543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=2.7e-14 Score=156.82 Aligned_cols=143 Identities=17% Similarity=0.207 Sum_probs=115.9
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++++..|+-... +.++.+ .|.+.|.+++|||||++| ++|+.+++|+|||+.+.....
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~-------------~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETG-------------EKLLDIKAHEDEVLCCAFSSDDSYI-ATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTC-------------CEEEEECCCSSCEEEEEECTTSSEE-EEEETTSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------CEEEEeccCCCCEEEEEEecCCCEE-EEEeCCCeEEEEECCCCceEE
Confidence 46788899999999993222 133444 378899999999999987 567789999999998754321
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
. . ..+...|++++|+| ++.++++|+.||+|++||++++.++.++.+|...+
T Consensus 694 ~--~-----------~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v-------------- 746 (1249)
T 3sfz_A 694 T--Y-----------DEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSV-------------- 746 (1249)
T ss_dssp E--E-----------ECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCE--------------
T ss_pred E--E-----------cCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCE--------------
Confidence 1 1 12336899999999 55699999999999999999999999999988877
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|+++.|+| .| +|++||+.+++
T Consensus 747 ---~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 747 ---NHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp ---EEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred ---EEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 88999999999997 46 99999999886
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=134.95 Aligned_cols=157 Identities=12% Similarity=0.082 Sum_probs=112.2
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-Ccee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk 81 (358)
.+.++++.++.+..|+ ..... ......-++++.+.++..+.+++|+|++ +++|+.++.|++||+.+ ....
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~ 184 (342)
T 1yfq_A 113 DKLIAASWDGLIEVIDPRNYGD-----GVIAVKNLNSNNTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDN 184 (342)
T ss_dssp TEEEEEETTSEEEEECHHHHTT-----BCEEEEESCSSSSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCC
T ss_pred CEEEEEcCCCeEEEEccccccc-----ccccccCCeeeEEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCcccccc
Confidence 4678899999999999 32100 0000001223345578899999999998 46678899999999987 4321
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC------ceeEEEeCCCCcccc---ccC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMK------VKAGTLDCAFNCISN---ERD 151 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~------~~i~~L~~~~~~v~~---~~~ 151 (358)
.... ...+...|++++|+| ++.+|++|+.||.|++||.+.+ +.+..+.+|...... ...
T Consensus 185 ~~~~-----------~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 185 GTIE-----------ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp CEEE-----------ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred ceee-----------ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence 1111 112225799999999 9999999999999999999987 778888877541000 001
Q ss_pred CCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 152 TEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ .+++|+|++++|++ .| .|+|||+.+++
T Consensus 254 i-----------~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 254 V-----------NSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284 (342)
T ss_dssp E-----------EEEEECTTTCCEEEEETTSCEEEEETTTTE
T ss_pred E-----------EEEEEcCCCCEEEEecCCceEEEEcCccHh
Confidence 1 88999999999987 46 99999999987
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.4e-14 Score=139.14 Aligned_cols=153 Identities=15% Similarity=0.117 Sum_probs=112.6
Q ss_pred eEEEEeecCCceeeee-e--ccCcccCCCcccccceeEEEEee-----CCCCEeEEE--EcCCCCEEEEEEecCCeEEEE
Q psy2085 4 EYCYQTNWHKQAVTLV-I--IGGRYLLPTNDIRRRIELIQDFE-----MPGVSTSVR--ISPDGQYVLSTGIYKPRVRCY 73 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~--~~~r~lk~d~~~~~rIeliqdfe-----~~~~v~~v~--~SpDG~~LlatG~~d~~Irvw 73 (358)
.+.++++.|+.+..|+ + ...+.++ ..+...++.+. ....+.++. ++|||.+| ++|+.++.|++|
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~i~iw 197 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVK-----FLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL-VALTNLSRVIIF 197 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEE-----EEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE-EEEETTSEEEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceee-----ccccceeEEEEccCcccccCceEEEEEEcCCCCEE-EEEeCCCeEEEE
Confidence 5788999999999998 3 2322211 11223555554 456788888 77899876 677889999999
Q ss_pred EcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-CCCCccccccCC
Q psy2085 74 ETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDT 152 (358)
Q Consensus 74 Dl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i 152 (358)
|+.+...... +-.+.+.+.|++++|+|++.+|++|+.||+|++||+++++++.++. .+..++
T Consensus 198 d~~~~~~~~~-----------~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v------ 260 (437)
T 3gre_A 198 DIRTLERLQI-----------IENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPI------ 260 (437)
T ss_dssp ETTTCCEEEE-----------EECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEE------
T ss_pred eCCCCeeeEE-----------EccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCce------
Confidence 9987543211 1111123689999999999999999999999999999999999886 454455
Q ss_pred CccccccCCCceeeEEc----CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEE----EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs----~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|.|+ +++.+|++ .| +|+|||+.+|+
T Consensus 261 -----------~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 261 -----------THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp -----------EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred -----------EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 678665 45778887 36 99999999988
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.60 E-value=5.3e-14 Score=130.53 Aligned_cols=132 Identities=12% Similarity=0.139 Sum_probs=101.7
Q ss_pred cceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC
Q psy2085 34 RRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV 112 (358)
Q Consensus 34 ~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~ 112 (358)
+++.|...+. |.+.|++|+|+|++..+++||+.|++|+|||+.+..... ......+ ..+...|++++|+|+
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~-------~~~~~~l-~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY-------GIPQRAL-RGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS-------EEEEEEE-CCCSSCEEEEEECTT
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc-------ceeeEEE-eCCCCCEEEEEECCC
Confidence 4556777774 899999999999853345788899999999998643211 0111111 234478999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 113 HQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 113 ~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
+.+|++|+.||.|++|+............+...+ ..+.+++++..|+| .| .+++||....
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDV-----------------LSVAFSSDNRQIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE-----------------EEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCce-----------------eEEEEeecCccceeecCCCeEEEEEeCCC
Confidence 9999999999999999999998877777665554 66889999999987 46 9999999765
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 161 ~ 161 (340)
T 4aow_A 161 C 161 (340)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.60 E-value=5.5e-14 Score=146.82 Aligned_cols=154 Identities=19% Similarity=0.217 Sum_probs=110.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC-cee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL-SMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l-slk 81 (358)
.+..+++.++.+..|+-..+ +.++.+. |++.|.+++|+|||++| ++|+.++.|+|||+.+. ...
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~-------------~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~vw~~~~~~~~~ 133 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTG-------------EKVVDFEAHPDYIRSIAVHPTKPYV-LSGSDDLTVKLWNWENNWALE 133 (814)
T ss_dssp TEEEEEETTSEEEEEETTTC-------------CEEEEEECCSSCEEEEEECSSSSEE-EEEETTSEEEEEEGGGTSEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEecCCCCEEEEEEeCCCCEE-EEEcCCCEEEEEECCCCceEE
Confidence 46778888999999983222 2344444 78899999999999987 57788999999999764 211
Q ss_pred --eeeeccCceEEEEEeec-----------CCC--------------------CCeeEEEEcC--CCCEEEEEeCCCeEE
Q psy2085 82 --FERCFDSEVVTFEILSD-----------DYS--------------------SELNSIAINP--VHQLICVGTIEGKVE 126 (358)
Q Consensus 82 --~~r~~d~e~v~f~~LS~-----------D~s--------------------~~In~i~~np--~~~llasGs~DGtV~ 126 (358)
+..|. .. +....++| |.+ ..|++++|+| ++.+|++|+.||+|+
T Consensus 134 ~~~~~~~-~~-v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 134 QTFEGHE-HF-VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp EEEECCS-SC-EEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred EEEcCCC-Cc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 11111 11 11111122 110 5678888887 777888888888888
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+||+++++++.++.+|...+ ..+.|+|+++.|++ .| .|+|||..+++
T Consensus 212 ~~d~~~~~~~~~~~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 212 IWDYQTKSCVATLEGHMSNV-----------------SFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp EEETTTTEEEEEEECCSSCE-----------------EEEEECSSSSEEEEEETTSCEEEEETTTCS
T ss_pred EEECCCCcEEEEEcCCCCCE-----------------EEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 88888888777777776665 78999999999987 46 99999999877
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-14 Score=131.62 Aligned_cols=129 Identities=15% Similarity=0.164 Sum_probs=93.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
+++|+||+++ ++|+|. |++|+|||+.+...... . -...+...|++|+|+|++++||+|+.||+|++
T Consensus 28 ~~~l~WS~~~--~lAvg~-D~tV~iWd~~tg~~~~~--~---------~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 28 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQL--L---------QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEEE--E---------ECCSTTCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ceEEEECCCC--EEEEEe-CCEEEEEECCCCCEEEE--E---------EecCCCCeEEEEEECCCCCEEEEEECCCcEEE
Confidence 5889999997 557775 88999999987543211 0 01223367999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccc-cCCCccc-----cc-----------------cCCCc-eeeEEcCCCCEEEE--ec-c
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNE-RDTEEKE-----GK-----------------ASSDE-SSEEEEEEEEEEES--SD-D 180 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~-~~i~gl~-----Gt-----------------Rs~~P-~sI~fs~d~~~llS--aD-~ 180 (358)
||+++++++..+.+|...+... .....+. |+ .+..+ ..+.|++++.+|+| .| +
T Consensus 94 w~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 173 (318)
T 4ggc_A 94 WDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL 173 (318)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcc
Confidence 9999999999999887654221 0000000 11 01111 78899999999997 46 9
Q ss_pred eEEEECCCCc
Q psy2085 181 DQAWTKEIKK 190 (358)
Q Consensus 181 IKIWD~~tG~ 190 (358)
|+|||+.+|+
T Consensus 174 i~iwd~~~~~ 183 (318)
T 4ggc_A 174 VNVWPSAPGE 183 (318)
T ss_dssp EEEEESSCBT
T ss_pred eeEEECCCCc
Confidence 9999999876
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.9e-14 Score=147.60 Aligned_cols=143 Identities=6% Similarity=-0.049 Sum_probs=103.8
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC-----CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG-----VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~-----~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.-++|.++++..|+... ++..+++.. .+.+++|||||++| |+|+.|++|+|||+....+
T Consensus 100 LAs~s~dg~V~iwd~~~---------------~l~~l~~~~~~~~~sv~svafSPDG~~L-Asgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 100 MAVLSNNGNVSVFKDNK---------------MLTNLDSKGNLSSRTYHCFEWNPIESSI-VVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp EEEEETTSCEEEEETTE---------------EEEECCCSSCSTTTCEEEEEECSSSSCE-EEEETTSEEEEEECCCCTT
T ss_pred EEEEeCCCcEEEEeCCc---------------eeeeccCCCccccccEEEEEEcCCCCEE-EEEcCCCEEEEEECCCCcc
Confidence 44678888899997211 555555322 59999999999987 6778999999999986432
Q ss_pred eeeeeccCceEEEEEe---ecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce---eEEEe-CCCCccccccCCC
Q psy2085 81 KFERCFDSEVVTFEIL---SDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK---AGTLD-CAFNCISNERDTE 153 (358)
Q Consensus 81 k~~r~~d~e~v~f~~L---S~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~---i~~L~-~~~~~v~~~~~i~ 153 (358)
. .........+ ..+|.+.|.+|+|+|++ +++|+.|++|++||+..+.. ..+|. +|...|
T Consensus 164 ~-----~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V------- 229 (588)
T 2j04_A 164 N-----TPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI------- 229 (588)
T ss_dssp T-----CCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC-------
T ss_pred c-----cccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE-------
Confidence 0 0000011111 23344789999999999 77889999999999988774 35674 565555
Q ss_pred ccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
.+|+|+ |+.|+| +| +|++||..+++
T Consensus 230 ----------~svaFs--g~~LASa~~~tIkLWd~~~~~ 256 (588)
T 2j04_A 230 ----------TDLKIV--DYKVVLTCPGYVHKIDLKNYS 256 (588)
T ss_dssp ----------CCEEEE--TTEEEEECSSEEEEEETTTTE
T ss_pred ----------EEEEEE--CCEEEEEeCCeEEEEECCCCe
Confidence 789999 578886 57 99999999877
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-13 Score=135.72 Aligned_cols=153 Identities=14% Similarity=0.084 Sum_probs=113.2
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEc--CCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRIS--PDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~S--pDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
+..+++.|+++..|+-... ++++.|. |...|.+++|+ |++++| ++|+.++.|++||+.+....
T Consensus 175 ~l~s~s~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~l~~~~~~~~~~l-~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 175 ILVSGSTDRTVRVWDIKKG-------------CCTHVFEGHNSTVRCLDIVEYKNIKYI-VTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp EEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEEEESSSCEEE-EEEETTSCEEEEECCCCCCC
T ss_pred EEEEEeCCCCEEEEECCCC-------------cEEEEECCCCCccEEEEEecCCCCCEE-EEEcCCCcEEEeeCCCCccc
Confidence 7789999999999983222 2444554 78899999999 577765 67889999999999864311
Q ss_pred ------------------------eeeeccCceEE-------EEEeecC-------------------CCCCeeEEEEcC
Q psy2085 82 ------------------------FERCFDSEVVT-------FEILSDD-------------------YSSELNSIAINP 111 (358)
Q Consensus 82 ------------------------~~r~~d~e~v~-------f~~LS~D-------------------~s~~In~i~~np 111 (358)
........+.. +...+.| +...|.+++|+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 320 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 320 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET
T ss_pred ccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC
Confidence 00011111111 1111112 227899999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
++.+|++|+.||+|++||+++++++.++.+|...+ ..+.|+ +.+|+| .| +|+|||+.+
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v-----------------~~~~~~--~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALV-----------------GLLRLS--DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------------EEEEEC--SSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcE-----------------EEEEEc--CCEEEEEeCCCcEEEEECCC
Confidence 99999999999999999999999999999888776 778897 467776 46 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
+.
T Consensus 382 ~~ 383 (464)
T 3v7d_B 382 YS 383 (464)
T ss_dssp CC
T ss_pred Cc
Confidence 77
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.58 E-value=7.6e-14 Score=137.04 Aligned_cols=160 Identities=9% Similarity=0.010 Sum_probs=113.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|. ........ .......+..+ .|...+.+++|+|+|..++++|+.+++|+|||+......
T Consensus 142 ~~lat~~~dg~V~vwd~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 217 (430)
T 2xyi_A 142 CVIATKTPSSDVLVFDYTKHPSKPE----PSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE 217 (430)
T ss_dssp EEEEEECSSSCEEEEEGGGSCSSCC----TTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG
T ss_pred cEEEEECCCCcEEEEECCCcccccC----ccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC
Confidence 4778889999999999 33211111 11122333344 477889999999999945578889999999999863210
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCC---ceeEEEeCCCCccccccCCCcccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMK---VKAGTLDCAFNCISNERDTEEKEG 157 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~---~~i~~L~~~~~~v~~~~~i~gl~G 157 (358)
...+.....-..+...|++|+|+| .+.+|++|+.||+|++||++++ .++..+..|...+
T Consensus 218 ------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v----------- 280 (430)
T 2xyi_A 218 ------HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV----------- 280 (430)
T ss_dssp ------GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE-----------
T ss_pred ------CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe-----------
Confidence 000000000112336899999999 6789999999999999999987 5677887777766
Q ss_pred ccCCCceeeEEcCCCC-EEEE--ec-ceEEEECCCCc
Q psy2085 158 KASSDESSEEEEEEEE-EEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~-~llS--aD-~IKIWD~~tG~ 190 (358)
++|+|+|++. .|++ .| +|+|||++++.
T Consensus 281 ------~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~ 311 (430)
T 2xyi_A 281 ------NCLSFNPYSEFILATGSADKTVALWDLRNLK 311 (430)
T ss_dssp ------EEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ------EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC
Confidence 8899999997 4555 46 99999998744
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.3e-13 Score=129.75 Aligned_cols=153 Identities=10% Similarity=0.032 Sum_probs=95.7
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
..+.+.++.+..|+.... ++++.+.....+.+++|+|||++|+++|+.+++|++||+.+........
T Consensus 5 ~vs~~~d~~v~v~d~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~ 71 (391)
T 1l0q_A 5 YIANSESDNISVIDVTSN-------------KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP 71 (391)
T ss_dssp EEEETTTTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEEcCCCCEEEEEECCCC-------------eEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE
Confidence 345677889999983222 3555666677799999999999998888889999999998754322111
Q ss_pred ccCceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCce
Q psy2085 86 FDSEVVTFEILSDDYS-----------------------------SELNSIAINPVHQLI-CVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~ll-asGs~DGtV~iWD~Rs~~~ 135 (358)
.... +....+++|.. ..+.+++|+|+++.| ++++.||+|.+||+++++.
T Consensus 72 ~~~~-v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 72 AGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp CSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCC-ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 1111 11111111111 334555555555433 4444455555555555555
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
+..+..+.. |..+.|+|+++.|+ + .| .|++||+.+++
T Consensus 151 ~~~~~~~~~------------------~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 151 INTVSVGRS------------------PKGIAVTPDGTKVYVANFDSMSISVIDTVTNS 191 (391)
T ss_dssp EEEEECCSS------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEecCCC------------------cceEEECCCCCEEEEEeCCCCEEEEEECCCCe
Confidence 444443322 27899999999884 5 35 99999999887
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.3e-14 Score=136.94 Aligned_cols=118 Identities=13% Similarity=0.053 Sum_probs=75.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..|+|.|+++..|+ .... .++.-+.+...+.+|+|+|++..++++|+.|++|+|||+.+.....
T Consensus 157 ~~las~s~D~tv~~Wd~~~~~-------------~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 157 QVIASVGDDCTLIIWRLTDEG-------------PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEEEEEETTSEEEEEEEETTE-------------EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred CEEEEEECCCeEEEEECCCCc-------------eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 3678999999999999 3322 4556677889999999999998777899999999999998643221
Q ss_pred e--eeccC---ceEEE-------EEeecCCCCCeeEEEEc-CCCCEEEEEeCCCeEEEEeCCCCc
Q psy2085 83 E--RCFDS---EVVTF-------EILSDDYSSELNSIAIN-PVHQLICVGTIEGKVEAWDPRMKV 134 (358)
Q Consensus 83 ~--r~~d~---e~v~f-------~~LS~D~s~~In~i~~n-p~~~llasGs~DGtV~iWD~Rs~~ 134 (358)
. .+... ..... ......+...|.++.|+ |++..|++++.|++|++||++++.
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 1 11100 00000 00112233567777775 677777888888888888776654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-13 Score=137.91 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=102.5
Q ss_pred EEEee-CCCC-EeEEEEcC--CCCEEEEEEecCCeEEEEEcCCC------ceeeeeec--cCceEEEEEeecC-------
Q psy2085 39 IQDFE-MPGV-STSVRISP--DGQYVLSTGIYKPRVRCYETDNL------SMKFERCF--DSEVVTFEILSDD------- 99 (358)
Q Consensus 39 iqdfe-~~~~-v~~v~~Sp--DG~~LlatG~~d~~IrvwDl~~l------slk~~r~~--d~e~v~f~~LS~D------- 99 (358)
++.|. |... |++++|+| ||++| ++|+.++.|+|||+.+. ..+..+.. ....+....++++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l-~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYL-CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEE-EEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEE-EEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 34443 7788 99999999 99987 57788999999999632 11111111 1112222222332
Q ss_pred ------------------------CCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCC---ccccccC
Q psy2085 100 ------------------------YSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFN---CISNERD 151 (358)
Q Consensus 100 ------------------------~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~---~v~~~~~ 151 (358)
+...|++++|+|++. +|++|+.||+|++||+++++.+..+..|.. .+
T Consensus 135 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v----- 209 (615)
T 1pgu_A 135 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFV----- 209 (615)
T ss_dssp ECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCE-----
T ss_pred ccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceE-----
Confidence 226799999999997 899999999999999999999999998876 65
Q ss_pred CCccccccCCCceeeEEcCC-CCEEEE--ec-ceEEEECCCCcE
Q psy2085 152 TEEKEGKASSDESSEEEEEE-EEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d-~~~llS--aD-~IKIWD~~tG~~ 191 (358)
.+++|+|+ +++|++ .| .|+|||+.+|+.
T Consensus 210 ------------~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 210 ------------RDVEFSPDSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp ------------EEEEECSTTCCEEEEEETTCCEEEEETTTCCE
T ss_pred ------------EEEEECCCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 78999999 999986 46 999999999883
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.58 E-value=3.2e-14 Score=154.27 Aligned_cols=121 Identities=8% Similarity=0.050 Sum_probs=99.1
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
+..+..+.|+..|++++|+|||++| |+|+.|++|+|||..+....+. + .+...|++|+|+| +++
T Consensus 8 ~~~~~~~gh~~~V~~lafspdg~~l-Asgs~Dg~I~lw~~~~~~~~~~------------~--~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 8 LAETNKYGMSSKPIAAAFDFTQNLL-AIATVTGEVHIYGQQQVEVVIK------------L--EDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEEEEEECSSCEEEEEEETTTTEE-EEEETTSEEEEECSTTCEEEEE------------C--SSCCCEEEEEEET-TTE
T ss_pred eccccccCCCCCcEEEEECCCCCEE-EEEeCCCEEEEEeCCCcEEEEE------------c--CCCCCEEEEEEcC-CCE
Confidence 3445557899999999999999976 7889999999999875432111 1 1226799999999 889
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++|+.||+|++||+++++++.++.. ...+ .+++|+|++++|++ .| +|+|||+.+++
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~~-~~~V-----------------~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVFV-PGKI-----------------TSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEEC-SSCE-----------------EEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEECcCeEEEEECCCCcEEEEEcC-CCCE-----------------EEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 99999999999999999999988863 3444 78999999999997 46 99999998875
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.57 E-value=6.6e-14 Score=148.20 Aligned_cols=107 Identities=18% Similarity=0.186 Sum_probs=72.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPD--GQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|..+++.++.+..|+-.. ...++++.+. |.+.|++++|+|+ |++| ++|+.|++|+|||+.+...
T Consensus 22 ~~latg~~dg~I~vwd~~~-----------~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l-~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 22 KRLATCSSDKTIKIFEVEG-----------ETHKLIDTLTGHEGPVWRVDWAHPKFGTIL-ASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CCEEEEETTTEEEEEEEET-----------TEEEEEEEECCCSSCEEEEEECCTTSCSEE-EEEETTSCEEEEEEETTEE
T ss_pred CeEEEEECCCcEEEEecCC-----------CCCccceeccCCcCceEEEEecCCCCCCEE-EEEeCCCeEEEEECCCCcc
Confidence 4778899999999998221 1234555564 7889999999998 8876 6778899999999987532
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEEeCCCC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs~DGtV~iWD~Rs~ 133 (358)
...... ..+...|++++|+|+ +.+|++|+.||+|++||++++
T Consensus 90 ~~~~~~-----------~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQIAVH-----------AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEEEE-----------CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred cccccc-----------cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 111111 112245666666666 666666666666666666655
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.56 E-value=1.2e-13 Score=126.32 Aligned_cols=138 Identities=12% Similarity=0.126 Sum_probs=108.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.++++.++.+..|+ .. +.++.+ .+...+.++.|+| ++.+| ++|+.++.|++||..+....
T Consensus 115 ~~l~~~~~d~~i~~~d--~~-------------~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~ 178 (313)
T 3odt_A 115 GVVISGSWDKTAKVWK--EG-------------SLVYNLQAHNASVWDAKVVSFSENKF-LTASADKTIKLWQNDKVIKT 178 (313)
T ss_dssp TEEEEEETTSEEEEEE--TT-------------EEEEEEECCSSCEEEEEEEETTTTEE-EEEETTSCEEEEETTEEEEE
T ss_pred CEEEEEeCCCCEEEEc--CC-------------cEEEecccCCCceeEEEEccCCCCEE-EEEECCCCEEEEecCceEEE
Confidence 4677888899999997 10 223333 3678899999999 88876 56788999999995432111
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+...+...|++++|+|++. +++|+.||+|++||+++++++..+.+|...+
T Consensus 179 --------------~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i--------------- 228 (313)
T 3odt_A 179 --------------FSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV--------------- 228 (313)
T ss_dssp --------------ECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE---------------
T ss_pred --------------EeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE---------------
Confidence 1111226799999999988 8999999999999999999999999888776
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|+|++. |++ .| .|+|||+.+++
T Consensus 229 --~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 229 --YCIKLLPNGD-IVSCGEDRTVRIWSKENGS 257 (313)
T ss_dssp --EEEEECTTSC-EEEEETTSEEEEECTTTCC
T ss_pred --EEEEEecCCC-EEEEecCCEEEEEECCCCc
Confidence 8899999995 554 46 99999999988
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.56 E-value=9e-14 Score=133.47 Aligned_cols=164 Identities=7% Similarity=-0.070 Sum_probs=100.6
Q ss_pred eecCCceeeeeeccCcccCCCccc--ccceeE-EEEe-eCCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCceeee
Q psy2085 9 TNWHKQAVTLVIIGGRYLLPTNDI--RRRIEL-IQDF-EMPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMKFE 83 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~r~lk~d~~~--~~rIel-iqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk~~ 83 (358)
++.++.+..|+-...+.......- ...+.. ++.+ .|.+.|++++|||||++| +||+.|++ |+|||+.+.....
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~- 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVR- 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEE-
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEE-
Confidence 677888999983222211111100 011122 4444 478899999999999976 67889998 9999998653211
Q ss_pred eeccCceEEEEEeecC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce--eEEEeCC-----CCcccc--ccCCC
Q psy2085 84 RCFDSEVVTFEILSDD-YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK--AGTLDCA-----FNCISN--ERDTE 153 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D-~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~--i~~L~~~-----~~~v~~--~~~i~ 153 (358)
.+... +...|++++|+|++.+|++|+.||+|++||++.+.. ...+... ...... .+.+.
T Consensus 233 -----------~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 233 -----------EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp -----------EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred -----------EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 11111 336899999999999999999999999999987642 1222110 000000 00000
Q ss_pred ccccccCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCC
Q psy2085 154 EKEGKASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIK 189 (358)
Q Consensus 154 gl~GtRs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG 189 (358)
.....+ ..++|+++++.|++ .| .+++|++..+
T Consensus 302 ----~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 302 ----VDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFD 337 (355)
T ss_dssp ----CCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEE
T ss_pred ----cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcC
Confidence 000001 56899999998886 47 9999998754
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.55 E-value=9.8e-14 Score=136.65 Aligned_cols=119 Identities=9% Similarity=0.030 Sum_probs=94.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
+...|++++|+|||++|+++|+.++.|+|||+. +.... +. +.. ..+...|++++|+|++.+|++|+.
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~--~~-------~~~--~~~~~~v~~~~~sp~~~~l~~~~~ 169 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVL--KL-------RKR--FCFSKRPNAISIAEDDTTVIIADK 169 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCE--EE-------EEE--EECSSCEEEEEECTTSSEEEEEET
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCcee--ee-------eec--ccCCCCceEEEEcCCCCEEEEEeC
Confidence 344799999999999988889999999999998 43211 10 000 011257999999999999999999
Q ss_pred CCeEEEEeCCCCceeE----EEeCCCCccccccCCCccccccCCCceeeEEcCC---CCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAG----TLDCAFNCISNERDTEEKEGKASSDESSEEEEEE---EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~----~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d---~~~llS--aD-~IKIWD~~tG~ 190 (358)
||.|.+||+.++.... .+.+|...+ .+|.|+|+ +.+|+| .| +|+|||+.+++
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v-----------------~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~ 231 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSML-----------------TDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF 231 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCE-----------------EEEEEEECTTSCEEEEEEETTSCEEEEEESCTT
T ss_pred CCcEEEEecCCcccccccceeeecccCce-----------------EEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc
Confidence 9999999999887554 666666665 88999999 888887 46 99999999887
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6.4e-14 Score=130.38 Aligned_cols=144 Identities=11% Similarity=0.148 Sum_probs=107.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCC-EEEEEEecCCeEEEEEc-CCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQ-YVLSTGIYKPRVRCYET-DNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~-~LlatG~~d~~IrvwDl-~~lsl 80 (358)
.|.++++.++.+..|. .... ....+...+.+...|.+++|+|+|+ +| ++|+.++.|++||+ .+...
T Consensus 24 ~~l~~~~~d~~v~iw~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~~wd~~~~~~~ 92 (342)
T 1yfq_A 24 SLLLITSWDGSLTVYKFDIQA----------KNVDLLQSLRYKHPLLCCNFIDNTDLQI-YVGTVQGEILKVDLIGSPSF 92 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTT----------TEEEEEEEEECSSCEEEEEEEESSSEEE-EEEETTSCEEEECSSSSSSE
T ss_pred CEEEEEcCCCeEEEEEeCCCC----------ccccceeeeecCCceEEEEECCCCCcEE-EEEcCCCeEEEEEeccCCce
Confidence 4778899999999999 3321 1122344457889999999999999 66 56778999999999 76432
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeEEEeCCCCccccccC
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM---------KVKAGTLDCAFNCISNERD 151 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs---------~~~i~~L~~~~~~v~~~~~ 151 (358)
.... ...+...|++++|+| +.+|++|+.||+|++||+++ ++++.++. +...+
T Consensus 93 ~~~~------------~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v----- 153 (342)
T 1yfq_A 93 QALT------------NNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKI----- 153 (342)
T ss_dssp EECB------------SCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCE-----
T ss_pred Eecc------------ccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCce-----
Confidence 1110 000336899999999 99999999999999999998 66666555 33333
Q ss_pred CCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC-Cc
Q psy2085 152 TEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI-KK 190 (358)
Q Consensus 152 i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t-G~ 190 (358)
.++.|+|++ .+++ .| .|+|||+.+ +.
T Consensus 154 ------------~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~ 182 (342)
T 1yfq_A 154 ------------FTMDTNSSR-LIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp ------------EEEEECSSE-EEEEESTTEEEEEESSCCTT
T ss_pred ------------EEEEecCCc-EEEEeCCCeEEEEECCcccc
Confidence 789999988 3333 56 999999998 55
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1e-13 Score=152.24 Aligned_cols=153 Identities=10% Similarity=0.043 Sum_probs=111.7
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-- 81 (358)
.|..+++.|+.+..|+-..+. ++....++..+.++.|+|++. + ++|+.+++|++||+.+....
T Consensus 1016 ~~l~s~~~dg~i~vwd~~~~~-------------~~~~~~~~~~v~~~~~~~~~~-l-~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNWQTGD-------------YVFLQAHQETVKDFRLLQDSR-L-LSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp SCEEEECSSSBEEEEETTTTE-------------EECCBCCSSCEEEEEECSSSE-E-EEEESSSEEEEEETTTTCCCEE
T ss_pred CEEEEEcCCCEEEEEECCCCc-------------eEEEecCCCcEEEEEEcCCCc-E-EEEECCCcEEEEECCCCceeEE
Confidence 367788899999999832221 122335778899999999886 3 46678999999999865432
Q ss_pred eeeeccCceEEEEEeecCC-----------------------------CCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 82 FERCFDSEVVTFEILSDDY-----------------------------SSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~-----------------------------s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
+..|. .. +....+++|. .+.|++++|+|++.+||+|+.||+|++||+.+
T Consensus 1081 ~~~~~-~~-v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~ 1158 (1249)
T 3sfz_A 1081 FTCHQ-GT-VLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSD 1158 (1249)
T ss_dssp EECCS-SC-CCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSS
T ss_pred EcccC-Cc-EEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 22221 11 1122223321 16799999999999999999999999999999
Q ss_pred CceeEEE---------eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 133 KVKAGTL---------DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 133 ~~~i~~L---------~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
++++..+ ..|...+ .+++|+|+|.+|++++ .|++||+.+|+
T Consensus 1159 ~~~~~~~~~~~~~~~~~~~~~~v-----------------~~l~fs~dg~~l~s~~g~v~vwd~~~g~ 1209 (1249)
T 3sfz_A 1159 GQLLHSCAPISVEEGTATHGGWV-----------------TDVCFSPDSKTLVSAGGYLKWWNVATGD 1209 (1249)
T ss_dssp SCCCCCCCCCC-------CCSCC-----------------CEEEECTTSSCEEEESSSEEEBCSSSCB
T ss_pred CceEEEeccccccccccccCceE-----------------EEEEECCCCCEEEECCCeEEEEECCCCc
Confidence 8877665 2333333 7899999999999999 99999999987
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-12 Score=123.06 Aligned_cols=150 Identities=10% Similarity=0.019 Sum_probs=90.4
Q ss_pred eecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC
Q psy2085 9 TNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS 88 (358)
Q Consensus 9 ~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~ 88 (358)
.+.++.+..|+.... ++++.+.....+.+++|+|||++|+++++.++.|++||+.+......-....
T Consensus 92 ~~~~~~v~v~d~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 92 NMASSTLSVIDTTSN-------------TVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ETTTTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCEEEEEECCCC-------------eEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 334566777763222 3445556677899999999999998888889999999998654321111111
Q ss_pred ceEEEEEeecCCC-----------------------------CCeeEEEEcCCCCEEEEEe---CCCeEEEEeCCCCcee
Q psy2085 89 EVVTFEILSDDYS-----------------------------SELNSIAINPVHQLICVGT---IEGKVEAWDPRMKVKA 136 (358)
Q Consensus 89 e~v~f~~LS~D~s-----------------------------~~In~i~~np~~~llasGs---~DGtV~iWD~Rs~~~i 136 (358)
.+ ....+++|.. ..+.+++|+|++..|++++ .++.|.+||+++++.+
T Consensus 159 ~~-~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SP-KGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SE-EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred Cc-ceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 11 1111111110 2344555555555444444 3455555555555554
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
..+..+.. |..+.|+|+++.|+ + .| .|++||..+|+
T Consensus 238 ~~~~~~~~------------------~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 238 ARIPVGPD------------------PAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEECCSS------------------EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEecCCC------------------ccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 44444332 27899999999884 5 36 99999999988
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.51 E-value=9.8e-14 Score=146.85 Aligned_cols=119 Identities=9% Similarity=0.050 Sum_probs=97.0
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC--CCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--HQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--~~llasGs 120 (358)
.|.+.|++++|+|||++| ++|+.+++|+|||+.....+..... ..+.+.|++++|+|+ +++|++|+
T Consensus 7 gH~~~V~~l~~s~dg~~l-atg~~dg~I~vwd~~~~~~~~~~~l-----------~~h~~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRL-ATCSSDKTIKIFEVEGETHKLIDTL-----------TGHEGPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp -CCCCEEEECCCSSSCCE-EEEETTTEEEEEEEETTEEEEEEEE-----------CCCSSCEEEEEECCTTSCSEEEEEE
T ss_pred cCcceeEEEEECCCCCeE-EEEECCCcEEEEecCCCCCccceec-----------cCCcCceEEEEecCCCCCCEEEEEe
Confidence 378899999999999976 6778899999999875432222111 233478999999988 89999999
Q ss_pred CCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCC--CCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEE--EEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d--~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||++++. .+..+.+|...+ .++.|+|+ +..|++ .| +|+|||+.++.
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V-----------------~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASV-----------------NSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCE-----------------EEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCeEEEEECCCCcccccccccCCCCCe-----------------EEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 99999999999987 677777777776 88999999 888886 46 99999998873
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.49 E-value=4.3e-13 Score=129.57 Aligned_cols=71 Identities=4% Similarity=-0.020 Sum_probs=59.4
Q ss_pred CCeeEEEEcCCCCEEEE--EeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e
Q psy2085 102 SELNSIAINPVHQLICV--GTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S 178 (358)
Q Consensus 102 ~~In~i~~np~~~llas--Gs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a 178 (358)
..+++|+|||+++++|+ |+.||+|++||+++++++..+.. ...| .+|+|+|+|++|++ +
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~-~~~V-----------------~~v~fspdg~~l~s~s 195 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET-RGEV-----------------KDLHFSTDGKVVAYIT 195 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC-SSCC-----------------CEEEECTTSSEEEEEC
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC-CCce-----------------EEEEEccCCceEEecc
Confidence 34889999999998764 45799999999999999998874 3444 88999999999997 5
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
| .+.+|+..+|+
T Consensus 196 ~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 196 GSSLEVISTVTGS 208 (365)
T ss_dssp SSCEEEEETTTCC
T ss_pred ceeEEEEEeccCc
Confidence 6 88888888776
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.49 E-value=2.1e-12 Score=126.33 Aligned_cols=150 Identities=14% Similarity=0.092 Sum_probs=95.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.++.+..|+.... ++++.+ .|.+.|.+++| ||++| ++|+.+++|+|||+.+.....
T Consensus 144 ~~l~~g~~dg~i~iwd~~~~-------------~~~~~~~~h~~~v~~l~~--~~~~l-~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 144 QKIVSGLRDNTIKIWDKNTL-------------ECKRILTGHTGSVLCLQY--DERVI-ITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SEEEEEESSSCEEEEESSSC-------------CEEEEECCCSSCEEEEEC--CSSEE-EEEETTSCEEEEESSSCCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCC-------------eEEEEEcCCCCcEEEEEE--CCCEE-EEEcCCCeEEEEECCCCcEEE
Confidence 46788899999999983222 233444 37788999998 77765 678899999999998654321
Q ss_pred ee-eccCceEEE-------EEeec----------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 83 ER-CFDSEVVTF-------EILSD----------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 83 ~r-~~d~e~v~f-------~~LS~----------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
.. .....+..+ ...+. .+...|++++| ++++|++|+.||+|++||+++
T Consensus 208 ~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTT
T ss_pred EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCc
Confidence 11 011111100 00011 11145566666 455666666666666666666
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++++.++.+|...+ .++.|+ +..|++ .| +|+|||..+|+
T Consensus 286 ~~~~~~~~~~~~~v-----------------~~~~~~--~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 286 CEFVRTLNGHKRGI-----------------ACLQYR--DRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp CCEEEEEECCSSCE-----------------EEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEcCCCCcE-----------------EEEEeC--CCEEEEEeCCCeEEEEECCCCC
Confidence 66666666655544 677884 567776 46 99999999988
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.1e-12 Score=126.31 Aligned_cols=127 Identities=9% Similarity=0.019 Sum_probs=87.0
Q ss_pred CEeEEEEcCC----CCEEEEEEecCCeEEEEEcCCCceeeee-eccCceEEEEEeecCCC---------CCeeEEEEcC-
Q psy2085 47 VSTSVRISPD----GQYVLSTGIYKPRVRCYETDNLSMKFER-CFDSEVVTFEILSDDYS---------SELNSIAINP- 111 (358)
Q Consensus 47 ~v~~v~~SpD----G~~LlatG~~d~~IrvwDl~~lslk~~r-~~d~e~v~f~~LS~D~s---------~~In~i~~np- 111 (358)
.|+.++|||| |++++++| . .++||++.+..+.... ......|....+++|.. ..++.++|+|
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g-~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSG-N--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp EEEEECC------CCEEEEEEE-E--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred ceEEEEECCCccccccEEEeCC-C--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 5789999999 99887654 2 3777887654332221 00122344444555432 5788999999
Q ss_pred --CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE------------E
Q psy2085 112 --VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE------------S 177 (358)
Q Consensus 112 --~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll------------S 177 (358)
++.+||+||.|++|++||+++++++.+|.+|...+. .+ ..++|+|+|.+++ |
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~---~v-----------~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQA---SV-----------CHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---C---CC-----------EEEEEEETTEEEEEEC----------
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCccee---ee-----------EEEEECCCCCEEEEeccCCCcceeec
Confidence 678999999999999999999999999986543221 11 5678999988763 3
Q ss_pred --ec-ceEEEECCCCc
Q psy2085 178 --SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 --aD-~IKIWD~~tG~ 190 (358)
.| +||+||..+|+
T Consensus 256 Gs~D~tIklWd~~tgk 271 (356)
T 2w18_A 256 RSPVFQLIVINPKTTL 271 (356)
T ss_dssp --CCEEEEEEETTTTE
T ss_pred cCCCcEEEEEECCCCE
Confidence 47 99999999998
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.44 E-value=6.1e-12 Score=123.01 Aligned_cols=154 Identities=10% Similarity=0.106 Sum_probs=98.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|.++++.|+++..|+.... ++++.+ .|.+.|.++.|+ +.+ +++|+.+++|++||+.+.....
T Consensus 130 ~~l~sg~~dg~i~vwd~~~~-------------~~~~~~~~h~~~v~~~~~~--~~~-l~s~~~dg~i~vwd~~~~~~~~ 193 (445)
T 2ovr_B 130 NRIVSGSDDNTLKVWSAVTG-------------KCLRTLVGHTGGVWSSQMR--DNI-IISGSTDRTLKVWNAETGECIH 193 (445)
T ss_dssp TEEEEEETTSCEEEEETTTC-------------CEEEECCCCSSCEEEEEEE--TTE-EEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEECCCcEEEEECCCC-------------cEEEEEcCCCCCEEEEEec--CCE-EEEEeCCCeEEEEECCcCcEEE
Confidence 47788999999999993222 133344 377889999998 444 4778899999999998753221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccc-cCCCccc-----
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNE-RDTEEKE----- 156 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~-~~i~gl~----- 156 (358)
. . ..+...|++++++ ++.|++|+.||+|++||+++++++..+.+|...+.+. +.-.-+.
T Consensus 194 ~--~-----------~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 258 (445)
T 2ovr_B 194 T--L-----------YGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 258 (445)
T ss_dssp E--E-----------CCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred E--E-----------CCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence 1 1 1122567777775 3567777777777777777777777777666655321 1100000
Q ss_pred cc------c----------CCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 157 GK------A----------SSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 157 Gt------R----------s~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+ + +..+ .++.| ++..|++ .| +|+|||+.+++
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~ 310 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN 310 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC
Confidence 11 0 1111 67777 6677775 46 89999988887
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=130.08 Aligned_cols=154 Identities=10% Similarity=0.046 Sum_probs=103.4
Q ss_pred EeecCCceeeee-eccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 8 QTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
+++.|+++..|+ ..... ......+.+..++.+. |...|++|+|+|++..++++|+.|++|+|||+.+......
T Consensus 113 sgs~d~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~-- 187 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSN---EAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA-- 187 (434)
T ss_dssp ETTTEEEEEEEEHHHHHC---TTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE--
T ss_pred ccCCCceEEEEEcccccc---CCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee--
Confidence 788899999999 32210 0000111222333333 6788999999998434557888999999999986421110
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc-cccCCCccccccCCCce
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS-NERDTEEKEGKASSDES 164 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~-~~~~i~gl~GtRs~~P~ 164 (358)
.. .+...|++++|+|++.+|++|+.||+|++||++ +....++..+..... ....+ .
T Consensus 188 ---------~~--~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v-----------~ 244 (434)
T 2oit_A 188 ---------TL--PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV-----------L 244 (434)
T ss_dssp ---------EE--CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE-----------E
T ss_pred ---------cc--CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE-----------E
Confidence 01 122579999999999999999999999999998 666667765432100 00011 7
Q ss_pred eeEEcCCCCEEEEe---c-------ceEEEECCCC
Q psy2085 165 SEEEEEEEEEEESS---D-------DDQAWTKEIK 189 (358)
Q Consensus 165 sI~fs~d~~~llSa---D-------~IKIWD~~tG 189 (358)
+|.|++++.++++. | .+++||+.+.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 89999998887642 2 2999999864
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.43 E-value=7e-12 Score=121.06 Aligned_cols=119 Identities=13% Similarity=0.176 Sum_probs=93.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
+++.+.++..+.+++|+|||++|+++++.+++|++||+.+.... .. +.. ...+++++|+|++.+|+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~--~~----------~~~--~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 295 LIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ--KS----------IPV--FDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE--EE----------EEC--SSSEEEEEECTTSSEEE
T ss_pred EEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE--EE----------ecC--CCCCCeEEEcCCCCEEE
Confidence 34445566678999999999999999889999999999864321 11 111 15789999999999888
Q ss_pred EEeC---------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c
Q psy2085 118 VGTI---------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D 179 (358)
Q Consensus 118 sGs~---------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D 179 (358)
+++. ||.|.+||+.+++.+..+..+..+ ..++|+|+|+.|++ . |
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~------------------~~~~~s~dg~~l~~~~~~d 422 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQP------------------TGLDVSPDNRYLVISDFLD 422 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSE------------------EEEEECTTSCEEEEEETTT
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCC------------------ceEEEcCCCCEEEEEECCC
Confidence 7776 589999999999999888864432 78999999999874 3 6
Q ss_pred -ceEEEECCC
Q psy2085 180 -DDQAWTKEI 188 (358)
Q Consensus 180 -~IKIWD~~t 188 (358)
+|+|||++.
T Consensus 423 ~~i~v~~~~~ 432 (433)
T 3bws_A 423 HQIRVYRRDG 432 (433)
T ss_dssp TEEEEEEETT
T ss_pred CeEEEEEecC
Confidence 999999863
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.2e-11 Score=114.21 Aligned_cols=148 Identities=8% Similarity=0.008 Sum_probs=110.9
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC---CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG---VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~---~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
.|.++.+.+.++..|+.... ++++.+..+. .+.+++|||||+++++++..+++|.+||+.+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKM-------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE
T ss_pred cEEEEcCCCCeEEEEECCCC-------------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe
Confidence 47888999999999983222 2345555565 5889999999999888888889999999986543
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT------------IEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
...-....... +...+.+++|+|+++.|++++ .++.|.+||+.+++.+..+.....+
T Consensus 69 ~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~--- 137 (337)
T 1pby_B 69 LGRIDLSTPEE--------RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI--- 137 (337)
T ss_dssp EEEEECCBTTE--------EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC---
T ss_pred EeeEEcCCccc--------ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc---
Confidence 21100000000 002567899999999888876 5799999999999888887754332
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..+.|+|+|++|+.++ .|.+||..+|+
T Consensus 138 ---------------~~~~~s~dg~~l~~~~~~i~~~d~~~~~ 165 (337)
T 1pby_B 138 ---------------TMLAWARDGSKLYGLGRDLHVMDPEAGT 165 (337)
T ss_dssp ---------------CCEEECTTSSCEEEESSSEEEEETTTTE
T ss_pred ---------------ceeEECCCCCEEEEeCCeEEEEECCCCc
Confidence 6799999999888889 99999999987
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.40 E-value=7.4e-12 Score=122.43 Aligned_cols=111 Identities=11% Similarity=0.195 Sum_probs=88.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|...|++++| +|++| ++|+.++.|+|||+.+...... . ..+...|.+++++ +.+|++|+.|
T Consensus 254 ~~~~~v~~~~~--~~~~l-~s~~~dg~i~vwd~~~~~~~~~--~-----------~~~~~~v~~~~~~--~~~l~~g~~d 315 (435)
T 1p22_A 254 GHRAAVNVVDF--DDKYI-VSASGDRTIKVWNTSTCEFVRT--L-----------NGHKRGIACLQYR--DRLVVSGSSD 315 (435)
T ss_dssp CCSSCEEEEEE--ETTEE-EEEETTSEEEEEETTTCCEEEE--E-----------ECCSSCEEEEEEE--TTEEEEEETT
T ss_pred CCCCcEEEEEe--CCCEE-EEEeCCCeEEEEECCcCcEEEE--E-----------cCCCCcEEEEEeC--CCEEEEEeCC
Confidence 46778999999 78876 5678899999999987543211 1 1223678899885 5799999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|++||+++++++.++.+|...+ .++.| ++..|++ .| .|+|||+.++.
T Consensus 316 g~i~iwd~~~~~~~~~~~~h~~~v-----------------~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 316 NTIRLWDIECGACLRVLEGHEELV-----------------RCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCE-----------------EEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CeEEEEECCCCCEEEEEeCCcCcE-----------------EEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 999999999999999999888776 77888 6778886 46 99999997654
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.39 E-value=4.5e-12 Score=123.57 Aligned_cols=110 Identities=14% Similarity=0.131 Sum_probs=85.5
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
++.|+||+++ ++|+|. |++|+|||+.+..... ...+ ..+...|++|+|+|++.+||+|+.||+|++
T Consensus 108 ~~~l~wS~~n--~lAvgl-d~tV~lWd~~tg~~~~----------~~~~-~~~~~~V~sv~fspdg~~lasgs~Dg~v~i 173 (420)
T 4gga_A 108 LNLVDWSSGN--VLAVAL-DNSVYLWSASSGDILQ----------LLQM-EQPGEYISSVAWIKEGNYLAVGTSSAEVQL 173 (420)
T ss_dssp CBCEEECTTS--EEEEEE-TTEEEEEETTTCCEEE----------EEEC-CSTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ceeEEECCCC--EEEEEe-CCEEEEEECCCCCEEE----------EEEe-cCCCCcEEEEEECCCCCEEEEEECCCeEEE
Confidence 6889999875 557775 8899999998754321 1111 122357999999999999999999999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||+++++++.++.+|...+ .++.|+ +..|++ .| .+++||.....
T Consensus 174 Wd~~~~~~~~~~~~h~~~v-----------------~~~s~~--~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 174 WDVQQQKRLRNMTSHSARV-----------------GSLSWN--SYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp EETTTTEEEEEECCCSSCE-----------------EEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred EEcCCCcEEEEEeCCCCce-----------------EEEeeC--CCEEEEEeCCCceeEeeecccc
Confidence 9999999999999887765 556654 567776 46 99999987644
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-11 Score=117.85 Aligned_cols=141 Identities=8% Similarity=-0.052 Sum_probs=104.4
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.++.+.++.+..|+.... +++..+ .+...+.+++|+|||++++++++.++.|++||+.+....
T Consensus 183 ~~~s~~~d~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~-- 247 (433)
T 3bws_A 183 LWVSQMQANAVHVFDLKTL-------------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI-- 247 (433)
T ss_dssp EEEEEGGGTEEEEEETTTC-------------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE--
T ss_pred EEEEECCCCEEEEEECCCc-------------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE--
Confidence 4556677777888873211 123333 356689999999999999888878999999999865321
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe--------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCcc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT--------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs--------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl 155 (358)
.... . ...+.+++|+|+++.|++++ .||.|.+||+++++.+..+.... .+
T Consensus 248 ~~~~----------~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~--------- 305 (433)
T 3bws_A 248 RKTD----------K--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG-NK--------- 305 (433)
T ss_dssp EECC----------C--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE-CE---------
T ss_pred EEec----------C--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC-Cc---------
Confidence 1111 1 14589999999999888888 58999999999998877764322 22
Q ss_pred ccccCCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 156 EGKASSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
..+.|+|+++.|+ + .| .|++||..+++
T Consensus 306 --------~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 306 --------RHIVSGNTENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp --------EEEEECSSTTEEEEEETTTTEEEEEETTTTE
T ss_pred --------ceEEECCCCCEEEEEecCCCEEEEEECCCCc
Confidence 7799999998665 4 35 99999999887
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.36 E-value=5.5e-11 Score=116.20 Aligned_cols=129 Identities=12% Similarity=0.128 Sum_probs=87.6
Q ss_pred EEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee-eccCceEEE-------EEeecC---------
Q psy2085 38 LIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER-CFDSEVVTF-------EILSDD--------- 99 (358)
Q Consensus 38 liqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r-~~d~e~v~f-------~~LS~D--------- 99 (358)
+++.+. +...+.++.| ||.+| ++|+.++.|++||+.+....... .....+..+ ...+.|
T Consensus 271 ~~~~~~~~~~~v~~~~~--~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 271 CLHTLQGHTNRVYSLQF--DGIHV-VSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEEECCCSSCEEEEEE--CSSEE-EEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EeEEecCCCCceEEEEE--CCCEE-EEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECC
Confidence 445554 6778999998 78876 56778999999999865432111 011111111 111111
Q ss_pred -------------CCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEe-----CCCCccccccCCCccccccCC
Q psy2085 100 -------------YSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLD-----CAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 100 -------------~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~-----~~~~~v~~~~~i~gl~GtRs~ 161 (358)
+...|++++|+ +++|++|+.||+|++||+++++.+..+. .+...+
T Consensus 348 ~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v--------------- 410 (445)
T 2ovr_B 348 TGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVV--------------- 410 (445)
T ss_dssp TCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEE---------------
T ss_pred CCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceE---------------
Confidence 22568888886 4789999999999999999998888873 233333
Q ss_pred CceeeEEcCCCCEEEE--ec-c----eEEEECCC
Q psy2085 162 DESSEEEEEEEEEEES--SD-D----DQAWTKEI 188 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~----IKIWD~~t 188 (358)
.+++|+|++..|++ .| + |.|||...
T Consensus 411 --~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 411 --WRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp --EEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred --EEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 78999999998886 34 6 99999864
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.36 E-value=2.4e-11 Score=112.41 Aligned_cols=146 Identities=17% Similarity=0.154 Sum_probs=102.8
Q ss_pred eEEEEe-ecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCc
Q psy2085 4 EYCYQT-NWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLS 79 (358)
Q Consensus 4 ~~~~~~-~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~ls 79 (358)
.|.|.. +.++.+..|+ ...+ ..+.++.+.+...+.+++|||||++|++++..++.|.+|++. +..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEG-----------ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTS-----------CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred EEEEEeCCCCCeEEEEEECCCC-----------cEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc
Confidence 466666 6688999998 3211 234566677888899999999999987766555899999997 333
Q ss_pred eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEEeCC---CCceeEEEeCCCCccccccCCCcc
Q psy2085 80 MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEAWDPR---MKVKAGTLDCAFNCISNERDTEEK 155 (358)
Q Consensus 80 lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~iWD~R---s~~~i~~L~~~~~~v~~~~~i~gl 155 (358)
++.... +... ..+.+++|+|+++.|++++ .+|.|.+||+. +...+..+..+..+
T Consensus 74 ~~~~~~----------~~~~--~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~---------- 131 (343)
T 1ri6_A 74 LTFAAE----------SALP--GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGC---------- 131 (343)
T ss_dssp EEEEEE----------EECS--SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTB----------
T ss_pred eeeccc----------cccC--CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCc----------
Confidence 221111 1111 3688999999999665554 58999999994 44445555443322
Q ss_pred ccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCC-Cc
Q psy2085 156 EGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEI-KK 190 (358)
Q Consensus 156 ~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~t-G~ 190 (358)
..+.|+|+|+.|++ .| .|.+||+.+ |+
T Consensus 132 --------~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 132 --------HSANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp --------CCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred --------eEEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 67999999998775 35 999999987 64
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.6e-10 Score=105.35 Aligned_cols=162 Identities=12% Similarity=0.185 Sum_probs=87.5
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
.++++.+.....+.+++|+|||++|++++..+++|.+||+.. ..+..... . .+.......+++++|+|+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~pdg~ 190 (343)
T 1ri6_A 119 VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP-------A-EVTTVEGAGPRHMVFHPNEQ 190 (343)
T ss_dssp EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-------E-EEECSTTCCEEEEEECTTSS
T ss_pred ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc-------c-ccccCCCCCcceEEECCCCC
Confidence 345566666667999999999999987775789999999976 33321100 0 00000002455566666655
Q ss_pred EE-EEEeCCCeEEEEeCCC--Cce--eEE----------------EeC-CCC-ccc-cc--------cCCCccccc----
Q psy2085 115 LI-CVGTIEGKVEAWDPRM--KVK--AGT----------------LDC-AFN-CIS-NE--------RDTEEKEGK---- 158 (358)
Q Consensus 115 ll-asGs~DGtV~iWD~Rs--~~~--i~~----------------L~~-~~~-~v~-~~--------~~i~gl~Gt---- 158 (358)
.+ +++..++.|.+||+.. +.. +.. +.. +.. .+. .. +.++...|+
T Consensus 191 ~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 191 YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 33 3333556666666532 111 000 100 000 000 00 000000011
Q ss_pred ----cCCCceeeEEcCCCCEEEE-e--c-ceEEE--ECCCCc-----EEecCCCCCcccccc
Q psy2085 159 ----ASSDESSEEEEEEEEEEES-S--D-DDQAW--TKEIKK-----TYNLGPAPKWCGFLD 205 (358)
Q Consensus 159 ----Rs~~P~sI~fs~d~~~llS-a--D-~IKIW--D~~tG~-----~y~lgpap~Wcsfld 205 (358)
....|..++|+|+|++|+. . | .|.|| |..+|+ .+..|..|.++.|..
T Consensus 271 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 271 GFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp EEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEEEEE
T ss_pred eeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccCCCCeeEEEEc
Confidence 0111378999999998775 2 4 99999 555775 236788888877753
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.3e-10 Score=105.28 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=93.6
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCe-EEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-E
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPR-VRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-L 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~-IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-l 115 (358)
+++.+.......+++|+|||++|++++..++. |.+|++......... ....+... ....+++|+|+++ +
T Consensus 120 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~-------~~~~~~~~--~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 120 FISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT-------GQEFISGG--TRPFNITFTPDGNFA 190 (331)
T ss_dssp EEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE-------EEEEECSS--SSEEEEEECTTSSEE
T ss_pred eEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec-------CCccccCC--CCccceEECCCCCEE
Confidence 34556666778999999999998888877788 999999753211110 01112221 4689999999998 5
Q ss_pred EEEEeCCCeEEEEeCCCCce---eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCC
Q psy2085 116 ICVGTIEGKVEAWDPRMKVK---AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEI 188 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~---i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~t 188 (358)
++++..+++|.+||+.+++. +..+..+..+ ..+.|+|+|++|+. .+ .|.+||..+
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~------------------~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTNNLP------------------GTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECSSCC------------------CCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCCCCC------------------ceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 56666799999999999988 7777754333 67999999997764 24 999999999
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
|+
T Consensus 253 ~~ 254 (331)
T 3u4y_A 253 GT 254 (331)
T ss_dssp TE
T ss_pred Cc
Confidence 88
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.26 E-value=2.7e-10 Score=112.00 Aligned_cols=114 Identities=11% Similarity=0.003 Sum_probs=84.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC---CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-EE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK---PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-VG 119 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d---~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-sG 119 (358)
+...+.+++|||||++|+.+ +++ ++|++||+.+..... +. .+...+.+++|+|+++.|+ ++
T Consensus 177 ~~~~v~~~~~Spdg~~la~~-s~~~~~~~i~~~d~~tg~~~~------------l~--~~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYV-TFESGRSALVIQTLANGAVRQ------------VA--SFPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEE-ECTTSSCEEEEEETTTCCEEE------------EE--CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcceeeEEcCCCCEEEEE-EecCCCcEEEEEECCCCcEEE------------ee--cCCCcccCEEEcCCCCEEEEEE
Confidence 56789999999999988654 455 499999998653211 00 1125689999999999777 66
Q ss_pred eCCCe--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c---ceEEEECCCCc
Q psy2085 120 TIEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D---DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D---~IKIWD~~tG~ 190 (358)
+.||. |.+||+++++. ..+..+...+ ..+.|+|+|+.|++ + | .|.+||..+|+
T Consensus 242 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~-----------------~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 242 SKTGSLNLYVMDLASGQI-RQVTDGRSNN-----------------TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp CTTSSCEEEEEETTTCCE-EECCCCSSCE-----------------EEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred ecCCCceEEEEECCCCCE-EeCcCCCCcc-----------------cceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 66665 99999998875 4555554444 77999999998874 3 3 57777998876
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.24 E-value=2.3e-10 Score=106.27 Aligned_cols=146 Identities=12% Similarity=0.114 Sum_probs=102.6
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+..+.+.+.++..|+.... ++++.+..+. .+..++|+|||+++++++..+++|.+||+.+.....
T Consensus 13 ~~v~~~~~~~v~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASD-------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp EEEEEETTTEEEEEETTTT-------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCeEEEEECCCC-------------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 4556677888888884332 2344455555 678999999999888888788999999998653321
Q ss_pred eeeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC------------CeEEEEeCCCCce---eEEEeCCCCcc
Q psy2085 83 ERCFDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIE------------GKVEAWDPRMKVK---AGTLDCAFNCI 146 (358)
Q Consensus 83 ~r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~D------------GtV~iWD~Rs~~~---i~~L~~~~~~v 146 (358)
.-..... ... ...+++++|+|+++.|++++.+ +.|.+||+.+++. +..+..+.. +
T Consensus 80 ~~~~~~~~~~~--------~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~ 150 (349)
T 1jmx_B 80 HANLSSVPGEV--------GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQ-V 150 (349)
T ss_dssp EEESCCSTTEE--------EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSS-C
T ss_pred EEEcccccccc--------cccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCc-c
Confidence 1110000 000 0237899999999999888865 9999999988543 344444332 2
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..++|+|+|+ |+.++ .|.+||..+|+
T Consensus 151 -----------------~~~~~s~dg~-l~~~~~~i~~~d~~~~~ 177 (349)
T 1jmx_B 151 -----------------YLMRAADDGS-LYVAGPDIYKMDVKTGK 177 (349)
T ss_dssp -----------------CCEEECTTSC-EEEESSSEEEECTTTCC
T ss_pred -----------------cceeECCCCc-EEEccCcEEEEeCCCCc
Confidence 6789999999 66677 99999999988
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.21 E-value=8.1e-10 Score=108.58 Aligned_cols=117 Identities=10% Similarity=-0.015 Sum_probs=85.6
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+++.+.+++|||||++|+.+++.++ .|.+||+.+.... +-. .+...+.+++|+|+++.|++++
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--~l~------------~~~~~~~~~~~spdg~~l~~~s 285 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--QVT------------DGRSNNTEPTWFPDSQNLAFTS 285 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE--ECC------------CCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE--eCc------------CCCCcccceEECCCCCEEEEEE
Confidence 46778999999999999886765544 5999999864321 110 1115689999999999888888
Q ss_pred C-CC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e---c-ceEEEECCCCcE
Q psy2085 121 I-EG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S---D-DDQAWTKEIKKT 191 (358)
Q Consensus 121 ~-DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a---D-~IKIWD~~tG~~ 191 (358)
. +| .|.+||+.+++. ..+..+...+ .++.|+|+|++|++ . + .|.+||+.+|+.
T Consensus 286 ~~~g~~~i~~~d~~~~~~-~~l~~~~~~~-----------------~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 286 DQAGRPQVYKVNINGGAP-QRITWEGSQN-----------------QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CTTSSCEEEEEETTSSCC-EECCCSSSEE-----------------EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCCCCcEEEEEECCCCCE-EEEecCCCcc-----------------cCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 6 45 677779988763 3343333333 67999999999885 2 3 899999998873
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1e-09 Score=112.34 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=107.2
Q ss_pred eEEEEeecCCceeeeee--ccCcccCCCcccccceeEEEEeeCCCCEeEEEEcC----CCCEEEEEEecCCeEEEEEcCC
Q psy2085 4 EYCYQTNWHKQAVTLVI--IGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISP----DGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~--~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~Sp----DG~~LlatG~~d~~IrvwDl~~ 77 (358)
.|.|.++.+.++..|+. .. .++++.+........++||| ||++|++++..+++|.|||..+
T Consensus 191 ~~l~v~~~d~~V~v~D~~~~t-------------~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 191 RYLLVIGRDARIDMIDLWAKE-------------PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp CEEEEEETTSEEEEEETTSSS-------------CEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred CEEEEECCCCeEEEEECcCCC-------------CcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 58899999988999984 22 13455666666789999999 9999987766789999999987
Q ss_pred CceeeeeeccCce--EEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeE--EEeCCCCccccccCC
Q psy2085 78 LSMKFERCFDSEV--VTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAG--TLDCAFNCISNERDT 152 (358)
Q Consensus 78 lslk~~r~~d~e~--v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~--~L~~~~~~v~~~~~i 152 (358)
+... ....... ++.....++ ..+.+|.++|++. +++++..+|+|.+||..+.+.+. ++.....+
T Consensus 258 ~~~~--~~i~~~g~~~~~~~~~~~--~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~------- 326 (543)
T 1nir_A 258 LEPK--QIVSTRGMTVDTQTYHPE--PRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFL------- 326 (543)
T ss_dssp CCEE--EEEECCEECSSSCCEESC--CCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSC-------
T ss_pred cccc--eeecccCcccCccccccC--CceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCc-------
Confidence 5432 1110000 000000111 3688999999765 67788889999999998876544 44432222
Q ss_pred CccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 153 EEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 153 ~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
..+.|+|+|+++++ .| +|.+||..+|+
T Consensus 327 -----------~~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 327 -----------HDGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp -----------CCEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred -----------cCceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 67999999998764 25 99999999998
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.15 E-value=4.2e-09 Score=96.97 Aligned_cols=130 Identities=14% Similarity=0.080 Sum_probs=91.2
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC-----------c----------eE-----
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS-----------E----------VV----- 91 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~-----------e----------~v----- 91 (358)
+++.+..+..+.+++|+|||++|+++ ++.|.+||+.+......-.... . .+
T Consensus 127 ~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 203 (337)
T 1pby_B 127 RRKAFEAPRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFY 203 (337)
T ss_dssp EEEEEECCSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEE
T ss_pred EEEEEeCCCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeee
Confidence 34455556678899999999988765 5789999998654321100000 0 00
Q ss_pred ----------------EEEEeec-----------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 92 ----------------TFEILSD-----------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 92 ----------------~f~~LS~-----------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.++.. .+...+++++|+|++..++++ ++.|.+||+.+++.+..+..+..
T Consensus 204 ~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~ 281 (337)
T 1pby_B 204 TARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHS 281 (337)
T ss_dssp EEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSC
T ss_pred ccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCc
Confidence 0111111 111356789999999988887 79999999999998888876543
Q ss_pred ccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 145 CISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 145 ~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+ .++.|+|+|++|++ .| .|.+||..+++
T Consensus 282 ~------------------~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 282 Y------------------YSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp C------------------CEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred e------------------eeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 3 67999999998875 45 99999999988
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-09 Score=99.93 Aligned_cols=130 Identities=8% Similarity=-0.013 Sum_probs=92.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC--CCCeeEEEEcCCCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY--SSELNSIAINPVHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~--s~~In~i~~np~~~l 115 (358)
+++.+........++|+|||+++++++..++.|.+||+.+......-...... .+.+ ...+.+++|+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~s~dg~~ 154 (353)
T 3vgz_A 81 VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRK------RTEEVRPLQPRELVADDATNT 154 (353)
T ss_dssp EEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCC------CCSSCCCCEEEEEEEETTTTE
T ss_pred EEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCc------cccccCCCCCceEEECCCCCE
Confidence 44455555667889999999998888887899999999875432111100000 0000 012688999999986
Q ss_pred EEEEe--CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 116 ICVGT--IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs--~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+++++ .++.|.+||+.+++.+..+..+.... ..+.|+|+|+.|+.+ | .|.+||..+++
T Consensus 155 l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-----------------~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 155 VYISGIGKESVIWVVDGGNIKLKTAIQNTGKMS-----------------TGLALDSEGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEESSSCEEEEEETTTTEEEEEECCCCTTC-----------------CCCEEETTTTEEEEECTTSEEEEEETTTTE
T ss_pred EEEEecCCCceEEEEcCCCCceEEEecCCCCcc-----------------ceEEECCCCCEEEEEcCCCeEEEEECCCCe
Confidence 65554 58999999999999988887333222 679999999988864 4 89999999988
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.14 E-value=8e-10 Score=99.05 Aligned_cols=118 Identities=16% Similarity=0.046 Sum_probs=85.9
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IE 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~D 122 (358)
....+.+++|+|||++|+.++..++.++||++.....+... +. .....+.+++|+|++..|++++ .+
T Consensus 127 ~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~-----------~~-~~~~~~~~~~~s~dg~~l~~~~~~~ 194 (297)
T 2ojh_A 127 KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR-----------LT-HGEGRNDGPDYSPDGRWIYFNSSRT 194 (297)
T ss_dssp SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE-----------CC-CSSSCEEEEEECTTSSEEEEEECTT
T ss_pred cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE-----------cc-cCCCccccceECCCCCEEEEEecCC
Confidence 34458899999999999877878899999997532211111 00 1115689999999999777666 59
Q ss_pred CeEEEEeCC-CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec------------ceEEEECC
Q psy2085 123 GKVEAWDPR-MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD------------DDQAWTKE 187 (358)
Q Consensus 123 GtV~iWD~R-s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD------------~IKIWD~~ 187 (358)
+.+++|++. .+..+..+..+...+ ..+.|+|+|++|+. .| .|.+||+.
T Consensus 195 ~~~~i~~~~~~~~~~~~~~~~~~~~-----------------~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~ 257 (297)
T 2ojh_A 195 GQMQIWRVRVDGSSVERITDSAYGD-----------------WFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMD 257 (297)
T ss_dssp SSCEEEEEETTSSCEEECCCCSEEE-----------------EEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred CCccEEEECCCCCCcEEEecCCccc-----------------CCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence 999999986 455566666554433 67999999998874 22 39999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+++
T Consensus 258 ~~~ 260 (297)
T 2ojh_A 258 GGN 260 (297)
T ss_dssp SCS
T ss_pred CCC
Confidence 887
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-09 Score=96.99 Aligned_cols=127 Identities=13% Similarity=0.057 Sum_probs=76.7
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-Cceeeee-eccCceEEEEEeecCC------------C------
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFER-CFDSEVVTFEILSDDY------------S------ 101 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r-~~d~e~v~f~~LS~D~------------s------ 101 (358)
+.++..+.+++|||||++|+++ + ++.|.+||+.+ ....... ......+....+++|. .
T Consensus 38 ~~~~~~v~~~~~spdg~~l~~~-~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~ 115 (297)
T 2ojh_A 38 WQTPELFEAPNWSPDGKYLLLN-S-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLL 115 (297)
T ss_dssp EEESSCCEEEEECTTSSEEEEE-E-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEE
T ss_pred ccCCcceEeeEECCCCCEEEEE-c-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEE
Confidence 4467889999999999988654 3 78999999987 4332110 0000000000011110 0
Q ss_pred -------------CCeeEEEEcCCCCEEE-EEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceee
Q psy2085 102 -------------SELNSIAINPVHQLIC-VGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSE 166 (358)
Q Consensus 102 -------------~~In~i~~np~~~lla-sGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI 166 (358)
..+++++|+|+++.|+ +++.||.+++|++.. ......+..+...+ ..+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----------------~~~ 178 (297)
T 2ojh_A 116 PSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRN-----------------DGP 178 (297)
T ss_dssp ETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCE-----------------EEE
T ss_pred ECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCcc-----------------ccc
Confidence 3467777777777555 666777777777432 12223333333222 789
Q ss_pred EEcCCCCEEEE-e--c-ceEEEECC
Q psy2085 167 EEEEEEEEEES-S--D-DDQAWTKE 187 (358)
Q Consensus 167 ~fs~d~~~llS-a--D-~IKIWD~~ 187 (358)
.|+|+|+.|+. + | .++||+..
T Consensus 179 ~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 179 DYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eECCCCCEEEEEecCCCCccEEEEC
Confidence 99999998773 3 6 99999875
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.8e-09 Score=98.95 Aligned_cols=109 Identities=12% Similarity=0.083 Sum_probs=81.7
Q ss_pred EEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC---eEE
Q psy2085 50 SVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG---KVE 126 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG---tV~ 126 (358)
+++|+|||++|++++..+++|.+||+.+..+. .+. +... ...+.+++|+|+++.|+++..++ .|.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-~~~----------~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-VVA----------IQEG-QSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-EEE----------EEEC-SSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-EEe----------cccC-CCCccceEECCCCCEEEEecCCCCcccEE
Confidence 99999999999888877889999999865431 100 0111 13344499999999888655553 999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-c-eEEEECCC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-D-DQAWTKEI 188 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~-IKIWD~~t 188 (358)
+||+.+++.+..+..+..+ ..+.|+|+|++|+.+ + . |.+|++..
T Consensus 112 v~d~~~~~~~~~~~~~~~~------------------~~~~~spdg~~l~~~~~~~~~~i~~~~~~~ 160 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIPYDA------------------VGIAISPNGNGLILIDRSSANTVRRFKIDA 160 (331)
T ss_dssp EEETTTTEEEEEEECCTTE------------------EEEEECTTSSCEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCeEEEEECCCCc------------------cceEECCCCCEEEEEecCCCceEEEEEECC
Confidence 9999999988888765443 789999999877643 3 6 99999875
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.12 E-value=3.9e-09 Score=99.18 Aligned_cols=134 Identities=11% Similarity=0.126 Sum_probs=89.1
Q ss_pred ceeEEEEeeCC--CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC--CCeeEEEEc
Q psy2085 35 RIELIQDFEMP--GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--SELNSIAIN 110 (358)
Q Consensus 35 rIeliqdfe~~--~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--~~In~i~~n 110 (358)
++..+..+..+ .....++|||||++|++++..++.|.+|++.....++... ..+..+..++. ..+..++|+
T Consensus 174 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 174 QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQL-----GIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEE-----EEEESSCTTCCSCCEEEEEEEC
T ss_pred cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEe-----eeeeecCCCCCCCCcceeEEEC
Confidence 34445555443 3578899999999998888888999999987422121100 00111111111 348899999
Q ss_pred CCCCEE-EEEeCCCeEEEEeCCCC---ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c--ceE
Q psy2085 111 PVHQLI-CVGTIEGKVEAWDPRMK---VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D--DDQ 182 (358)
Q Consensus 111 p~~~ll-asGs~DGtV~iWD~Rs~---~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D--~IK 182 (358)
|+++.| +++..+++|.+||+... ..+..+..+.... ..++|+|+|++|+++ + .|.
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~-----------------~~~~~spdg~~l~v~~~~~~~v~ 311 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFP-----------------RDFDLDPTEAFVVVVNQNTDNAT 311 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCC-----------------CEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCc-----------------CeEEECCCCCEEEEEEcCCCcEE
Confidence 999865 66677999999998732 3455555433222 779999999988753 3 899
Q ss_pred EE--ECCCCc
Q psy2085 183 AW--TKEIKK 190 (358)
Q Consensus 183 IW--D~~tG~ 190 (358)
|| |..+|+
T Consensus 312 v~~~d~~tg~ 321 (347)
T 3hfq_A 312 LYARDLTSGK 321 (347)
T ss_dssp EEEECTTTCC
T ss_pred EEEEeCCCCe
Confidence 99 666777
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.11 E-value=4.9e-10 Score=115.84 Aligned_cols=33 Identities=21% Similarity=0.161 Sum_probs=25.7
Q ss_pred CEeEEEEcCCCCEEEEEEe--------cCCeEEEEEcCCCc
Q psy2085 47 VSTSVRISPDGQYVLSTGI--------YKPRVRCYETDNLS 79 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--------~d~~IrvwDl~~ls 79 (358)
.+.+++|||||++|+.++. +++.|.+||+.+..
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 102 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD 102 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc
Confidence 3899999999999866542 13789999998654
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=8.7e-09 Score=95.86 Aligned_cols=117 Identities=6% Similarity=-0.012 Sum_probs=87.7
Q ss_pred EeEEEEcCCCCEEEEEE-ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 48 STSVRISPDGQYVLSTG-IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG-~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..++.|+|||++|++++ ..+++|.+||+.+.... +.. . .....+++++|+|+++.|++++.+|.|.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~--~~~----------~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~ 209 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLK--TAI----------Q-NTGKMSTGLALDSEGKRLYTTNADGELI 209 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE--EEE----------C-CCCTTCCCCEEETTTTEEEEECTTSEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceE--EEe----------c-CCCCccceEEECCCCCEEEEEcCCCeEE
Confidence 68899999999987776 34788999999865322 111 1 0013478899999999999999999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
+||+.+++.+..+....... ...|..+.|+|+|+.|+.+ + .|.+||..+|+
T Consensus 210 ~~d~~~~~~~~~~~~~~~~~-------------~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 210 TIDTADNKILSRKKLLDDGK-------------EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp EEETTTTEEEEEEECCCSSS-------------CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred EEECCCCeEEEEEEcCCCCC-------------CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 99999999888876522110 0001679999999987742 3 99999999988
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.07 E-value=1e-09 Score=113.99 Aligned_cols=128 Identities=11% Similarity=0.014 Sum_probs=86.0
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCC-----eEEEEEcCCCceeeeeeccCceEEEEEeecCC-----------CCCeeEEE
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKP-----RVRCYETDNLSMKFERCFDSEVVTFEILSDDY-----------SSELNSIA 108 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~-----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-----------s~~In~i~ 108 (358)
+..+++++|||||++|+.++..++ +|.+||+.+.............-+...++.+- ...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999865443266 89999998754321111100000000000000 01378999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEE
Q psy2085 109 INPVHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAW 184 (358)
Q Consensus 109 ~np~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIW 184 (358)
|||+++.|++++. ++|.+||+.++. .+..+..+...+ ..++|||||++|++ .+ .|.+|
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~-----------------~~~~~SPDG~~la~~~~~~i~~~ 177 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFA-----------------TDAKLSPKGGFVSFIRGRNLWVI 177 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCE-----------------EEEEECTTSSEEEEEETTEEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCccc-----------------ccccCCCCCCEEEEEeCCcEEEE
Confidence 9999999999886 999999998873 334444443333 77999999999886 67 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
|+.+|+
T Consensus 178 d~~~g~ 183 (741)
T 2ecf_A 178 DLASGR 183 (741)
T ss_dssp ETTTTE
T ss_pred ecCCCC
Confidence 999887
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.06 E-value=7.2e-09 Score=96.06 Aligned_cols=130 Identities=10% Similarity=0.079 Sum_probs=89.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC---------------------c---eEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS---------------------E---VVT 92 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~---------------------e---~v~ 92 (358)
+.+..+.++..+.+++|+|||+ |++++ +.|.+||+.+......-.... . ...
T Consensus 139 ~~~~~~~~~~~~~~~~~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (349)
T 1jmx_B 139 KPVRTFPMPRQVYLMRAADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY 214 (349)
T ss_dssp CCSEEEECCSSCCCEEECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred ceeeeccCCCcccceeECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeee
Confidence 3445566777889999999999 66643 349999998654321111000 0 000
Q ss_pred EEEeecC-------------------------------CCCCeeEEEEcC-CCCEEEEEeCCCeEEEEeCCCCceeEEEe
Q psy2085 93 FEILSDD-------------------------------YSSELNSIAINP-VHQLICVGTIEGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 93 f~~LS~D-------------------------------~s~~In~i~~np-~~~llasGs~DGtV~iWD~Rs~~~i~~L~ 140 (358)
...+++| ....+.+++|+| ++++++++ ++.|.+||+.+++.+..+.
T Consensus 215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~ 292 (349)
T 1jmx_B 215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN 292 (349)
T ss_dssp EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE
T ss_pred eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc
Confidence 0111111 012567889999 99988887 8999999999999888887
Q ss_pred CCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 141 CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 141 ~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+..+ ..++|+|+|++|++ .| .|++||..+++
T Consensus 293 ~~~~~------------------~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 293 LDHTY------------------YCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp CSSCC------------------CEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred CCCCc------------------cceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 54433 67999999988875 35 99999999887
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.06 E-value=2.4e-09 Score=100.69 Aligned_cols=133 Identities=9% Similarity=0.028 Sum_probs=83.3
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
+.+...........++|||||+ |++++.. ++.|.+||+....++..... ... ...+..++|+|+++
T Consensus 31 ~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~---------~~~--~~~p~~~a~spdg~ 98 (347)
T 3hfq_A 31 TNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV---------VAP--GTPPAYVAVDEARQ 98 (347)
T ss_dssp EEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE---------EEE--SCCCSEEEEETTTT
T ss_pred EEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee---------ecC--CCCCEEEEECCCCC
Confidence 3344444445667899999999 7766643 67999999965443221110 001 14678999999999
Q ss_pred EEEEEe-CCCeEEEEeCCCCc---eeEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 115 LICVGT-IEGKVEAWDPRMKV---KAGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 115 llasGs-~DGtV~iWD~Rs~~---~i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
+|++++ .+|+|.+||+.... .+..+.... .+. ... ....|..+.|+|+|+.+++ .+ .|.+||+
T Consensus 99 ~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~-~~~--------~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 99 LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPR-PEQ--------DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSS-TTC--------SSCCEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCC-ccc--------cCCCceEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 777777 78999999996332 233332211 110 000 0011267999999994444 24 8999999
Q ss_pred C-CCc
Q psy2085 187 E-IKK 190 (358)
Q Consensus 187 ~-tG~ 190 (358)
. +|+
T Consensus 170 ~~~g~ 174 (347)
T 3hfq_A 170 SDAGQ 174 (347)
T ss_dssp CTTSC
T ss_pred CCCCc
Confidence 8 565
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.2e-08 Score=104.46 Aligned_cols=148 Identities=9% Similarity=-0.027 Sum_probs=99.6
Q ss_pred EeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEc--CCCceeeeee
Q psy2085 8 QTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYET--DNLSMKFERC 85 (358)
Q Consensus 8 ~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl--~~lslk~~r~ 85 (358)
+.+.+.++..|+.... ++++.+.....+.+++|||||++|+++ +.+++|++||+ .++. ....
T Consensus 154 s~~~d~~V~v~D~~t~-------------~~~~~i~~g~~~~~v~~spdg~~l~v~-~~d~~V~v~D~~~~t~~--~~~~ 217 (543)
T 1nir_A 154 TLRDAGQIALVDGDSK-------------KIVKVIDTGYAVHISRMSASGRYLLVI-GRDARIDMIDLWAKEPT--KVAE 217 (543)
T ss_dssp EEGGGTEEEEEETTTC-------------CEEEEEECSTTEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCE--EEEE
T ss_pred EEcCCCeEEEEECCCc-------------eEEEEEecCcccceEEECCCCCEEEEE-CCCCeEEEEECcCCCCc--EEEE
Confidence 4455666777763222 345555534448899999999998765 46799999999 5432 2211
Q ss_pred ccCceEEEEEeecCCCCCeeEEEEcC----CCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCcccccc
Q psy2085 86 FDSEVVTFEILSDDYSSELNSIAINP----VHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKEGKA 159 (358)
Q Consensus 86 ~d~e~v~f~~LS~D~s~~In~i~~np----~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~GtR 159 (358)
+ .. ...+..++|+| ++++|++++. +++|.+||..+++++.++..+...+.. .+..
T Consensus 218 i----------~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~------- 278 (543)
T 1nir_A 218 I----------KI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHP------- 278 (543)
T ss_dssp E----------EC--CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEES-------
T ss_pred E----------ec--CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCcccccc-------
Confidence 1 11 14578999999 9999988884 899999999999999988753211100 0000
Q ss_pred CCCceeeEEcCCCCEEE-E--ec-ceEEEECCCCc
Q psy2085 160 SSDESSEEEEEEEEEEE-S--SD-DDQAWTKEIKK 190 (358)
Q Consensus 160 s~~P~sI~fs~d~~~ll-S--aD-~IKIWD~~tG~ 190 (358)
.+.+..|.|+|++..++ + .| .|.+||..+++
T Consensus 279 ~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 279 EPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp CCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred CCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 00116799999887665 4 24 99999998765
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.03 E-value=6.6e-09 Score=98.32 Aligned_cols=120 Identities=8% Similarity=-0.012 Sum_probs=82.3
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--C
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI--E 122 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~--D 122 (358)
......++|||||++|++++..+++|.+||+.+..+..... .. ..+........++|+|++++|++++. +
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~-------~~-~~~~~~~~~~~i~~spdg~~l~v~~~~~~ 281 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT-------VA-ADTVNAQGSGDIHLSPDGKYLYASNRLKA 281 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE-------EE-SCSSCCCCEEEEEECTTSSEEEEEECSSS
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE-------Ee-cCCCCCCCcccEEECCCCCEEEEECCCCC
Confidence 44678999999999998877678999999997543321111 11 11111145789999999997755554 5
Q ss_pred CeEEEEeCC--CCc--eeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEE--ECCCCc
Q psy2085 123 GKVEAWDPR--MKV--KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAW--TKEIKK 190 (358)
Q Consensus 123 GtV~iWD~R--s~~--~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIW--D~~tG~ 190 (358)
++|.+||+. +++ .+..+.....+ ..++|+|+|++|+++ + .|.|| |..+|+
T Consensus 282 ~~i~v~~~~~~~g~~~~~~~~~~g~~~------------------~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 282 DGVAIFKVDETNGTLTKVGYQLTGIHP------------------RNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp CEEEEEEECTTTCCEEEEEEEECSSCC------------------CEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred CEEEEEEEcCCCCcEEEeeEecCCCCC------------------ceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 999999985 444 34445442112 779999999988753 3 89995 556776
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.99 E-value=2e-09 Score=111.74 Aligned_cols=115 Identities=11% Similarity=-0.027 Sum_probs=71.7
Q ss_pred CEeEEEEcCCCCEEEEEEe--------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGI--------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~--------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
.+.+++|||||++|+.++. .+++|++||+.+......+.+ ...+.+++|||+++.||+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--------------~~~~~~~~~SPDG~~la~ 126 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--------------PRPIQYLCWSPVGSKLAY 126 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC--------------CSSBCCEEECSSTTCEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec--------------CcccccceECCCCCEEEE
Confidence 3889999999999865543 258999999987542100111 045889999999999999
Q ss_pred EeCCCeEEEEeCCCCceeEEEe-CCCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE
Q psy2085 119 GTIEGKVEAWDPRMKVKAGTLD-CAFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS 177 (358)
++ |+.|.+||+.++.+..... ++...+... ..+.+. ..-......+.|||||+.|++
T Consensus 127 ~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g-~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 127 VY-QNNIYLKQRPGDPPFQITFNGRENKIFNG-IPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp EE-TTEEEEESSTTSCCEECCCCCBTTTEEES-SCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred EE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc-cccceeeeecccCcccEEECCCCCEEEE
Confidence 86 7899999999887654321 211111000 000000 000000046999999999985
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.98 E-value=6.8e-09 Score=105.28 Aligned_cols=107 Identities=10% Similarity=0.042 Sum_probs=80.2
Q ss_pred eEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC-
Q psy2085 49 TSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG- 123 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG- 123 (358)
.+++|||||++|++++ .+ ++|.+||+.+...+.. . ++.+.++.++|+|+++.|+++..+|
T Consensus 153 ~~~~~spDG~~la~~~-~~~~~~~~i~~~d~~~g~~~~l--~------------~~~~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLG-FFGGGRVSLFTSNLSSGGLRVF--D------------SGEGSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp CEEEEEEETTEEEEEE-EEETTEEEEEEEETTTCCCEEE--C------------CSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred ceEEECCCCCEEEEEE-EcCCCCeEEEEEcCCCCCceEe--e------------cCCCccccceECCCCCEEEEccCCCe
Confidence 8999999999986554 34 6799999886543211 1 1114679999999999999888899
Q ss_pred -eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE--------EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 -KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE--------EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 -tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~--------fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|.+||+.+++.. .+..+...+ ..+. |+|||..+++ .| +++||++ |+
T Consensus 218 ~~i~~~d~~~~~~~-~~~~~~~~~-----------------~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~ 276 (582)
T 3o4h_A 218 ARLVTVDPRDGSVE-DLELPSKDF-----------------SSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE 276 (582)
T ss_dssp EEEEEECTTTCCEE-ECCCSCSHH-----------------HHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE
T ss_pred eEEEEEcCCCCcEE-EccCCCcCh-----------------hhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC
Confidence 9999999998877 665554433 2344 9999976666 35 9999998 65
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.95 E-value=8.1e-09 Score=107.18 Aligned_cols=113 Identities=10% Similarity=-0.043 Sum_probs=72.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC---ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNL---SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l---slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
.+.+++|||||++|+.++ . ++|.+||+.+. ..... . .+...+.+++|||+++.||+++ ++
T Consensus 110 ~v~~~~~SpDg~~l~~~~-~-~~i~~~d~~~~~~~~~~~l--~------------~~~~~~~~~~~SPDG~~la~~~-~~ 172 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL-G-GELYLYDLKQEGKAAVRQL--T------------HGEGFATDAKLSPKGGFVSFIR-GR 172 (741)
T ss_dssp ESCCCEECTTSSEEEEEE-T-TEEEEEESSSCSTTSCCBC--C------------CSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred CcceeEECCCCCEEEEEe-C-CcEEEEECCCCCcceEEEc--c------------cCCcccccccCCCCCCEEEEEe-CC
Confidence 378899999999986654 3 89999999865 32110 0 0115689999999999999987 56
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.|.+||+.+++.......+...+..... +.+.......+..+.|||||++|++
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~SpDg~~l~~ 225 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIA-EFVADEEMDRHTGYWWAPDDSAIAY 225 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCC-CHHHHHHSCCCCSEEECTTSSCEEE
T ss_pred cEEEEecCCCCEEEeccCCccceecccc-ceeeeeccccccceEECCCCCEEEE
Confidence 9999999988765444333221100000 0000000000156999999998885
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.5e-09 Score=111.01 Aligned_cols=115 Identities=7% Similarity=-0.032 Sum_probs=82.3
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC--
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-- 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-- 121 (358)
+.....+++|||||+++ +++ .+++|++||+.+...... ++... .. ...|.+++|||+++.||+++.
T Consensus 14 ~~~~~~~~~~s~dg~~~-~~~-~d~~i~~~~~~~g~~~~~--~~~~~-----~~---~~~~~~~~~SpDg~~la~~~~~~ 81 (719)
T 1z68_A 14 FSYKTFFPNWISGQEYL-HQS-ADNNIVLYNIETGQSYTI--LSNRT-----MK---SVNASNYGLSPDRQFVYLESDYS 81 (719)
T ss_dssp TCCCCCCCEESSSSEEE-EEC-TTSCEEEEESSSCCEEEE--ECHHH-----HH---TTTCSEEEECTTSSEEEEEEEEE
T ss_pred ccCCCCccEECCCCeEE-EEc-CCCCEEEEEcCCCcEEEE--Ecccc-----cc---ccceeeEEECCCCCeEEEEecCc
Confidence 33445688999999755 444 588999999987543211 10000 00 014889999999999999887
Q ss_pred -------CCeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 122 -------EGKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 -------DGtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
+++|.+||+.+++.+ ..+. ..+ ..++|||||+.|++ .| .|++||..+|+
T Consensus 82 ~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~-----------------~~~~~SPDG~~la~~~~~~i~~~~~~~g~ 141 (719)
T 1z68_A 82 KLWRYSYTATYYIYDLSNGEFVRGNELP---RPI-----------------QYLCWSPVGSKLAYVYQNNIYLKQRPGDP 141 (719)
T ss_dssp ECSSSCEEEEEEEEETTTTEECCSSCCC---SSB-----------------CCEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eeEEeecceEEEEEECCCCccccceecC---ccc-----------------ccceECCCCCEEEEEECCeEEEEeCCCCC
Confidence 799999999998763 1221 112 67999999999886 67 99999998876
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.87 E-value=3.9e-08 Score=92.95 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=82.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce----e-eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-C
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSM----K-FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-I 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl----k-~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~ 121 (358)
+.+++|||||++|++++..++.|.+|++..... + +.... .. ....+... ..+++++|+|+++++++++ .
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~--~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG--TP-EAFKVAPG--SGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE--EE-EEEECCTT--CCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc--cc-cceecCCC--CCCeEEEEcCCCCEEEEEcCC
Confidence 478999999999988877788999999875331 1 11000 00 01111111 4678999999999776666 6
Q ss_pred CCeEEEEeCCCCce--eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---e-c-ceEEEECC--CCc
Q psy2085 122 EGKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---S-D-DDQAWTKE--IKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---a-D-~IKIWD~~--tG~ 190 (358)
+++|.+||+.++.. +..+....... ..|..|.|+|+|++|+. . + .|.||++. +|+
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~--------------~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNA--------------QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCC--------------CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCC--------------CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 99999999987754 33333211100 01167999999998864 3 5 89999995 555
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.86 E-value=1.5e-09 Score=112.21 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=83.7
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC---CCeeEEEEcCCCCEEEEEe
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS---SELNSIAINPVHQLICVGT 120 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s---~~In~i~~np~~~llasGs 120 (358)
+...+.+++|||||+++ ++ +.+++|++||+.+...+.. +. .+. ..|.+++|||+++.|++++
T Consensus 15 ~~~~~~~~~~spdg~~~-~~-~~dg~i~~~d~~~g~~~~~------------~~-~~~~~~~~v~~~~~SpDg~~l~~~~ 79 (723)
T 1xfd_A 15 FKIHDPEAKWISDTEFI-YR-EQKGTVRLWNVETNTSTVL------------IE-GKKIESLRAIRYEISPDREYALFSY 79 (723)
T ss_dssp TCCCCCCCCBSSSSCBC-CC-CSSSCEEEBCGGGCCCEEE------------EC-TTTTTTTTCSEEEECTTSSEEEEEE
T ss_pred CcccccccEEcCCCcEE-EE-eCCCCEEEEECCCCcEEEE------------ec-cccccccccceEEECCCCCEEEEEe
Confidence 33457889999999976 44 4688999999986532211 11 111 1489999999999999998
Q ss_pred CC---------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCC
Q psy2085 121 IE---------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 121 ~D---------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG 189 (358)
.+ +.|.+||+.+++. ..+....... ..+ ..++|||||+.|++ ++ .|.+||..+|
T Consensus 80 ~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~---~~~-----------~~~~~SPdG~~la~~~~~~i~~~~~~~g 144 (723)
T 1xfd_A 80 NVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSN---AKL-----------QYAGWGPKGQQLIFIFENNIYYCAHVGK 144 (723)
T ss_dssp SCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCS---CCC-----------SBCCBCSSTTCEEEEETTEEEEESSSSS
T ss_pred cCccceeecceeeEEEEECCCCce-EeccCCcccc---ccc-----------cccEECCCCCEEEEEECCeEEEEECCCC
Confidence 75 7888999998875 3343221110 001 66899999999886 67 9999999988
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
+
T Consensus 145 ~ 145 (723)
T 1xfd_A 145 Q 145 (723)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.85 E-value=2.4e-08 Score=103.14 Aligned_cols=130 Identities=9% Similarity=-0.064 Sum_probs=84.5
Q ss_pred EeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-----Cceee-eeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 41 DFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-----LSMKF-ERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 41 dfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-----lslk~-~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
...++..+.+++|||||++|+.+ .++.|.+||+.+ ..... .......+......-......+.+++|||+++
T Consensus 116 l~~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 116 LFDTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp EECCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred ccCCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 34456778899999999998653 478999999976 43221 00000000000000000002258999999999
Q ss_pred EEEEEe---------------------------------CCCeEEEEeCCCCceeEEEeC--CCCccccccCCCcccccc
Q psy2085 115 LICVGT---------------------------------IEGKVEAWDPRMKVKAGTLDC--AFNCISNERDTEEKEGKA 159 (358)
Q Consensus 115 llasGs---------------------------------~DGtV~iWD~Rs~~~i~~L~~--~~~~v~~~~~i~gl~GtR 159 (358)
.|++++ .++.|.+||+.+++....... +...+
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~------------- 260 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL------------- 260 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE-------------
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE-------------
Confidence 999987 457899999998875433321 22222
Q ss_pred CCCceeeEEcCCCCEEEE--ec------ceEEEECCCC
Q psy2085 160 SSDESSEEEEEEEEEEES--SD------DDQAWTKEIK 189 (358)
Q Consensus 160 s~~P~sI~fs~d~~~llS--aD------~IKIWD~~tG 189 (358)
..+.|+|||+.|++ .| .|.+||..+|
T Consensus 261 ----~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 261 ----TNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp ----EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred ----eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 67999999998875 22 8999999998
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-07 Score=90.47 Aligned_cols=79 Identities=11% Similarity=0.057 Sum_probs=59.1
Q ss_pred EEEcCCCCEEEEEeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE
Q psy2085 107 IAINPVHQLICVGTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE 175 (358)
Q Consensus 107 i~~np~~~llasGs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l 175 (358)
++|+|+++.+..+.. .++|.+||+.+++.+.++..+. + ..|+|+|+|++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p------------------~~ia~spdg~~l 319 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-A------------------LSMTIDQQRNLM 319 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-C------------------CEEEEETTTTEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-e------------------eEEEECCCCCEE
Confidence 577777664443322 3478888888888888887765 3 789999999999
Q ss_pred EEec--ceEEEECCCC--c---EE-ecCCCCCccccc
Q psy2085 176 ESSD--DDQAWTKEIK--K---TY-NLGPAPKWCGFL 204 (358)
Q Consensus 176 lSaD--~IKIWD~~tG--~---~y-~lgpap~Wcsfl 204 (358)
+++. +|.|||..+| + +. ..|..|.|..|.
T Consensus 320 ~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 320 LTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp EEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred EEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 8754 9999999999 6 33 578888776543
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.80 E-value=4.8e-07 Score=86.41 Aligned_cols=133 Identities=6% Similarity=-0.021 Sum_probs=81.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI- 121 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~- 121 (358)
....+.+++|||||++|+++...+.+|++||+. +..+..... +-.+.+...+..++|+|+++.|++++.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~---------~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS---------VDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE---------EECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeee---------EecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 345689999999999987765456799999997 443321110 000111146899999999998877765
Q ss_pred CCeEEEEeCC--CCcee---EEEeC-CCCccccccCCCccccccCCCceeeE-EcCCCCEEEEe----c-----ceEEEE
Q psy2085 122 EGKVEAWDPR--MKVKA---GTLDC-AFNCISNERDTEEKEGKASSDESSEE-EEEEEEEEESS----D-----DDQAWT 185 (358)
Q Consensus 122 DGtV~iWD~R--s~~~i---~~L~~-~~~~v~~~~~i~gl~GtRs~~P~sI~-fs~d~~~llSa----D-----~IKIWD 185 (358)
+++|.+|+.. +++.. ..+.. +.......... +....|..+. |+|||++|+++ | +|.+|+
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~ 288 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPET-----GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTT-----SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccc-----ccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEE
Confidence 7899999754 55542 22321 10000000000 0000116799 99999988753 2 499999
Q ss_pred CC-CCc
Q psy2085 186 KE-IKK 190 (358)
Q Consensus 186 ~~-tG~ 190 (358)
+. +|+
T Consensus 289 ~~~~g~ 294 (365)
T 1jof_A 289 LRDCGS 294 (365)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 96 676
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.78 E-value=1.2e-07 Score=103.43 Aligned_cols=116 Identities=8% Similarity=0.033 Sum_probs=87.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+...+.+++|||||++|+ +++.++.|++||+.+...+.. ...+.+.|.+++|+|+++.|++++.+
T Consensus 376 ~~~~~~~~~~~SpDG~~la-~~~~~~~v~~~d~~tg~~~~~-------------~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAV-VANDRFEIMTVDLETGKPTVI-------------ERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEE-------------EECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred CCccceeeeEECCCCCEEE-EECCCCeEEEEECCCCceEEe-------------ccCCCCCccceEECCCCCeEEEEecC
Confidence 4556789999999999885 566788999999986543211 11122568899999999999888775
Q ss_pred C----------eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECCCC
Q psy2085 123 G----------KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKEIK 189 (358)
Q Consensus 123 G----------tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG 189 (358)
+ +|.+||+.+++ +..+..+...+ ..+.|+|+|+.|++ + + ..++|+....
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~-----------------~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD-----------------YAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE-----------------EEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred ccccccCCCCCeEEEEECCCCc-EEEeeCCCccc-----------------CCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 4 99999999887 55665554433 67899999998885 3 4 8888987654
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 504 ~ 504 (1045)
T 1k32_A 504 N 504 (1045)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=5.5e-08 Score=106.14 Aligned_cols=115 Identities=6% Similarity=-0.089 Sum_probs=89.2
Q ss_pred eCCC-CEeEEEEcCCCCEEEEEEecCCeEE-EEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 43 EMPG-VSTSVRISPDGQYVLSTGIYKPRVR-CYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 43 e~~~-~v~~v~~SpDG~~LlatG~~d~~Ir-vwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+++ .+.+++|| ||+.|+.+ +.+..|. +||+....... +. .+...+.+++|+|+++.|++++
T Consensus 334 ~~~~~~~~~~~~s-dg~~l~~~-s~~~~l~~~~d~~~~~~~~-------------l~-~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 334 EPLRIRYVRRGGD-TKVAFIHG-TREGDFLGIYDYRTGKAEK-------------FE-ENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp CCSCEEEEEECSS-SEEEEEEE-ETTEEEEEEEETTTCCEEE-------------CC-CCCCSEEEEEECTTSSEEEEEE
T ss_pred CCCcceEEeeeEc-CCCeEEEE-ECCCceEEEEECCCCCceE-------------ec-CCccceeeeEECCCCCEEEEEC
Confidence 3455 78899999 99988654 4466777 88887543210 11 1225789999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe------------c-ceEEEECC
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS------------D-DDQAWTKE 187 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa------------D-~IKIWD~~ 187 (358)
.++.|.+||+.+++....+..+...+ ..++|||||++|+++ + .|++||+.
T Consensus 398 ~~~~v~~~d~~tg~~~~~~~~~~~~v-----------------~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 398 DRFEIMTVDLETGKPTVIERSREAMI-----------------TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSCC-----------------CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCeEEEEECCCCceEEeccCCCCCc-----------------cceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99999999999998877776666554 679999999988742 3 79999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+|+
T Consensus 461 ~g~ 463 (1045)
T 1k32_A 461 GRK 463 (1045)
T ss_dssp TTE
T ss_pred CCc
Confidence 877
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.74 E-value=6e-08 Score=98.30 Aligned_cols=109 Identities=10% Similarity=-0.088 Sum_probs=79.4
Q ss_pred CEeEEEEcCCCCEE-EEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 47 VSTSVRISPDGQYV-LSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~L-latG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
.....+|||||+.+ ++++.. ..+.|||+.+...+. -. .. .. ++++|+|+++.||+++.|
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~--l~----------~~---~~-~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRE--LA----------RL---PG-FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEE--EE----------EE---SS-CEEEEEEETTEEEEEEEEETT
T ss_pred CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEE--ee----------cC---CC-ceEEECCCCCEEEEEEEcCCC
Confidence 35577999999764 344544 455699987643221 10 00 12 789999999999988887
Q ss_pred -CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECCCCc
Q psy2085 123 -GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKEIKK 190 (358)
Q Consensus 123 -GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~tG~ 190 (358)
++|.+||+.+++.. .|..+...+ .+++|||||+.|++++ .|.+||..+|+
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~-----------------~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSF-----------------SSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEE-----------------EEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred CeEEEEEcCCCCCce-EeecCCCcc-----------------ccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 88999999888754 565554444 7799999999999643 79999999877
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=5.6e-08 Score=100.40 Aligned_cols=111 Identities=6% Similarity=-0.104 Sum_probs=71.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.+++|||| ++++++. ++.|++||+.+...... .. ....+.+++|||+++.||++ .|+.|
T Consensus 82 ~~v~~~~~spd-~~~~~~~--~~~i~~~d~~~~~~~~l------------~~--~~~~~~~~~~SpdG~~la~~-~~~~i 143 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT--QGGLVGFDMLARKVTYL------------FD--TNEETASLDFSPVGDRVAYV-RNHNL 143 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE--TTEEEEEETTTTEEEEE------------EC--CTTCCTTCEECTTSSEEEEE-ETTEE
T ss_pred cCceeEEECCC-CeEEEEE--CCEEEEEECCCCceEEc------------cC--CcccccCCcCCCCCCEEEEE-ECCeE
Confidence 46899999999 6666653 58999999986432110 11 11468889999999999995 68999
Q ss_pred EEEeCCC-----CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 126 EAWDPRM-----KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 126 ~iWD~Rs-----~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.+||+.+ ++.......+...+.....+ .......+..+.|||||++|++
T Consensus 144 ~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~---~~ee~~~~~~~~~SpDg~~la~ 197 (706)
T 2z3z_A 144 YIARGGKLGEGMSRAIAVTIDGTETLVYGQAV---HQREFGIEKGTFWSPKGSCLAF 197 (706)
T ss_dssp EEEECBCTTSCCCCCEESCSCCBTTEEESSCC---GGGCTTCCCSEEECTTSSEEEE
T ss_pred EEEecCcccccCCCcEEeccCCCCCeEcccch---hhhhcCCCceEEECCCCCEEEE
Confidence 9999998 76554333322211000000 0000000167999999999885
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=3.8e-07 Score=87.14 Aligned_cols=130 Identities=10% Similarity=0.074 Sum_probs=82.7
Q ss_pred eEEEEeeC---CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC--CceeeeeeccCceEEEEEeecCCC--C-------
Q psy2085 37 ELIQDFEM---PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN--LSMKFERCFDSEVVTFEILSDDYS--S------- 102 (358)
Q Consensus 37 eliqdfe~---~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~--lslk~~r~~d~e~v~f~~LS~D~s--~------- 102 (358)
..+..+.+ ......++|||||++|++++..+++|.+|++.. ..+..... ....+..++. .
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~------~~~~~~~~~~g~~~~~~~~~ 254 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH------SFPLIPPGIPDRDPETGKGL 254 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE------EEESSCTTCCCBCTTTSSBS
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc------eEEcCCCCcCCccccccccc
Confidence 34444543 346889999999999987776678999998763 22211000 0111111111 1
Q ss_pred CeeEEE-EcCCCCEEEEEeCC-C-----eEEEEeCC-CCceeEE---EeCCCCccccccCCCccccccCCCceeeEEcC-
Q psy2085 103 ELNSIA-INPVHQLICVGTIE-G-----KVEAWDPR-MKVKAGT---LDCAFNCISNERDTEEKEGKASSDESSEEEEE- 170 (358)
Q Consensus 103 ~In~i~-~np~~~llasGs~D-G-----tV~iWD~R-s~~~i~~---L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~- 170 (358)
.+..++ |+|+++.|++++.+ + +|.+||+. +++.... +..+.... ..++|+|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~-----------------~~~a~sp~ 317 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGG-----------------HSNAVSPC 317 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCT-----------------TCCCEEEC
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCc-----------------ccceecCC
Confidence 478999 99999977665532 2 89999986 5554321 22222111 6789999
Q ss_pred --CCCEEEEe--c--ceEEEECCCC
Q psy2085 171 --EEEEEESS--D--DDQAWTKEIK 189 (358)
Q Consensus 171 --d~~~llSa--D--~IKIWD~~tG 189 (358)
+|++|+++ + .|+||+.+..
T Consensus 318 ~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 318 PWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CcCCCEEEEEEcCCCeEEEEEEchh
Confidence 89998863 3 9999998754
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.69 E-value=9.4e-08 Score=100.46 Aligned_cols=118 Identities=11% Similarity=0.049 Sum_probs=82.9
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE- 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D- 122 (358)
|.....+++|+|||++|+ ++ +++|++||+.+...... +..... ..+....+.++|||+++.|++++.+
T Consensus 15 ~~~~~~~~~w~~dg~~~~-~~--~~~i~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~Spdg~~l~~~~~~~ 83 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLY-KQ--ENNILVFNAEYGNSSVF--LENSTF------DEFGHSINDYSISPDGQFILLEYNYV 83 (740)
T ss_dssp SCCCCCCEEECSSSEEEE-EE--TTEEEEEETTTCCEEEE--ECTTTT------TTCCSCCCEEEECTTSSEEEEEEEEE
T ss_pred ccccccccEECCCCcEEE-Ec--CCcEEEEECCCCceEEE--Eechhh------hhhcccccceEECCCCCEEEEEECCe
Confidence 444567899999998774 44 88999999987542211 100000 0111234568999999999999887
Q ss_pred --------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 123 --------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 123 --------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
|.+.+||+.+++... |..+...+ ...+|||||+.|+. .| .|.+||..+|+
T Consensus 84 ~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~~~-----------------~~~~~SPdG~~la~~~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 84 KQWRHSYTASYDIYDLNKRQLIT-EERIPNNT-----------------QWVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (740)
T ss_dssp ECSSSCEEEEEEEEETTTTEECC-SSCCCTTE-----------------EEEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eeEEEccceEEEEEECCCCcEEE-cccCCCcc-----------------eeeEECCCCCEEEEEECCeEEEEECCCCc
Confidence 556799999987543 43333333 67999999999885 68 99999998877
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.54 E-value=4.1e-07 Score=93.15 Aligned_cols=115 Identities=9% Similarity=-0.057 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEEecC---------CeEEEEEcCC------CceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK---------PRVRCYETDN------LSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d---------~~IrvwDl~~------lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
..+.+++|||||++|+.++... .+|.+||+.+ ...+ +-.. .+ ...+..++||
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~l~~----------~~-~~~~~~~~~S 196 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR--ELSD----------DA-HRFVTGPRLS 196 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE--ESSC----------SC-SSEECCCEEC
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee--EEEe----------cC-CCcccCceEC
Confidence 4578999999999987655321 5899999976 3221 1110 11 1356788999
Q ss_pred CCCCEEEEEeCC--------CeEEEEeCC-CC---ceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 111 PVHQLICVGTIE--------GKVEAWDPR-MK---VKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 111 p~~~llasGs~D--------GtV~iWD~R-s~---~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
|+++.|++++.+ ..|.+||+. ++ ........+...+ ..+.|+|||+.++++
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~-----------------~~~~~spdg~l~~~~ 259 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAI-----------------AQAEWAPDGSLIVAT 259 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCE-----------------EEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceE-----------------cceEECCCCeEEEEE
Confidence 999999988755 379999998 56 3333333323333 679999999976665
Q ss_pred c-----ceEEEECCCCc
Q psy2085 179 D-----DDQAWTKEIKK 190 (358)
Q Consensus 179 D-----~IKIWD~~tG~ 190 (358)
+ .|.+||..+|+
T Consensus 260 ~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 260 DRTGWWNLHRVDPATGA 276 (662)
T ss_dssp CTTSSCEEEEECTTTCC
T ss_pred CCCCCeEEEEEECCCCc
Confidence 3 45556665665
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-06 Score=92.21 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=54.3
Q ss_pred CEeEEEEcCCCCEEEEEEec--------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
..+.+.|||||++|+.+... .+.+.+||+.+...+. +. .+.+.+..++|||+++.||.
T Consensus 63 ~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---l~-----------~~~~~~~~~~~SPdG~~la~ 128 (740)
T 4a5s_A 63 SINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---EE-----------RIPNNTQWVTWSPVGHKLAY 128 (740)
T ss_dssp CCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC---SS-----------CCCTTEEEEEECSSTTCEEE
T ss_pred cccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE---cc-----------cCCCcceeeEECCCCCEEEE
Confidence 34568999999998655431 1567799998754321 10 01146889999999999999
Q ss_pred EeCCCeEEEEeCCCCcee
Q psy2085 119 GTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i 136 (358)
++ |+.|.+||+.++...
T Consensus 129 ~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 129 VW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EE-TTEEEEESSTTSCCE
T ss_pred EE-CCeEEEEECCCCceE
Confidence 85 689999999888754
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.50 E-value=8.4e-07 Score=87.76 Aligned_cols=110 Identities=15% Similarity=0.089 Sum_probs=77.9
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
...++|. |+.++| ||.+|++ | .++.|++||+.++...-... . +...|+++.+.+. -+|++
T Consensus 83 ~~~~lp~-V~~l~f--d~~~L~v-~-~~~~l~v~dv~sl~~~~~~~---------~----~~~~v~~i~~~~p--~~av~ 142 (388)
T 1xip_A 83 WEKEIPD-VIFVCF--HGDQVLV-S-TRNALYSLDLEELSEFRTVT---------S----FEKPVFQLKNVNN--TLVIL 142 (388)
T ss_dssp EEEECTT-EEEEEE--ETTEEEE-E-ESSEEEEEESSSTTCEEEEE---------E----CSSCEEEEEECSS--EEEEE
T ss_pred EEeeCCC-eeEEEE--CCCEEEE-E-cCCcEEEEEchhhhccCccc---------e----eecceeeEEecCC--CEEEE
Confidence 3446788 999999 9998865 4 67999999998764211100 0 1134666655443 38889
Q ss_pred eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 120 TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 120 s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
+.||+|.+||+..++... +. ..+ ++++|||+|..+...| ++++|+..++.
T Consensus 143 ~~dG~L~v~dl~~~~~~~-~~---~~V-----------------s~v~WSpkG~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 143 NSVNDLSALDLRTKSTKQ-LA---QNV-----------------TSFDVTNSQLAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp ETTSEEEEEETTTCCEEE-EE---ESE-----------------EEEEECSSEEEEEETTSCEEEEEEETTE
T ss_pred ECCCCEEEEEccCCcccc-cc---CCc-----------------eEEEEcCCceEEEEcCCcEEEEcCCCcc
Confidence 999999999999887653 21 223 7899999994344578 99999887765
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=4.7e-06 Score=75.90 Aligned_cols=114 Identities=6% Similarity=0.041 Sum_probs=80.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC-e
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG-K 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG-t 124 (358)
...+.|+++|+|+ |+++...++.|++||.....+ ... ..+.....+..|+++|++.+++++..++ .
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~---------~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQYL---RQI---------GGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETTCCEE---EEE---------SCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCCCCEE---EEE---------ccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 3578999999998 556666788999999754211 111 0111114678999999999999988886 9
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
|.+||+ +++.+..+..+.... .|..|+|+|+|+.+++ .| +|+||+...
T Consensus 231 i~~~~~-~g~~~~~~~~~~~~~---------------~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 231 LTIFTQ-DGQLISALESKVKHA---------------QCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEECT-TSCEEEEEEESSCCS---------------CEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEECC-CCCEEEEEcccCCCC---------------cceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 999996 566677665432210 1167999999987776 46 999999864
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.45 E-value=1.8e-06 Score=81.66 Aligned_cols=112 Identities=5% Similarity=-0.058 Sum_probs=77.4
Q ss_pred EEEcCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 51 VRISPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 51 v~~SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
.+|||||++|+.++..++ +|.+||+.+.... +.+ ......+..++|+|+++.|++++.++.|.+|
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt-----------~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLT-----------EGRGDNTFGGFLSPDDDALFYVKDGRNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECC-----------CSSCBCSSSCEECTTSSEEEEEETTTEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--Eee-----------eCCCCCccceEEcCCCCEEEEEeCCCeEEEE
Confidence 789999999877665456 5888888764321 111 1111233467899999999999999999999
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE------------------------ec-ceEE
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES------------------------SD-DDQA 183 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS------------------------aD-~IKI 183 (358)
|+.+++....+..+...+.. ....++|++..++. .+ .|.+
T Consensus 108 d~~~g~~~~~~~~~~~~~~~---------------~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 108 DLATLEENVVYQVPAEWVGY---------------GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp ETTTCCEEEEEECCTTEEEE---------------EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred ECCCCcceeeeechhhcccc---------------cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 99999876666554332200 11234888888862 23 7899
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||+.+|+
T Consensus 173 ~d~~~g~ 179 (388)
T 3pe7_A 173 VDLKTGE 179 (388)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9999987
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.44 E-value=3.7e-06 Score=86.07 Aligned_cols=127 Identities=11% Similarity=-0.010 Sum_probs=80.3
Q ss_pred CCCEeEEEEcCCCCEEEEEEecC-------CeEEEEEcC-CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYK-------PRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d-------~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+..+..++|||||++|+.++... .+|.+||+. +....- ...+...+...+..++|+|+++++
T Consensus 187 ~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~----------~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 187 HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD----------TRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE----------EEEEEEETTBCEEEEEECTTSCEE
T ss_pred CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc----------cEEeCCCCCceEcceEECCCCeEE
Confidence 45677899999999987655332 479999998 332110 001111112468899999999988
Q ss_pred EEEeCCC--eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEE--ECCCCc
Q psy2085 117 CVGTIEG--KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAW--TKEIKK 190 (358)
Q Consensus 117 asGs~DG--tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIW--D~~tG~ 190 (358)
++++.+| .|.+||+.+++....+..+.......++++. ..+.|+|++..++++. .++|| |..+|+
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM---------RWFAPLANGLIAVVHGKGAAVLGILDPESGE 327 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC---------CSEEECTTSCEEEEEBSSSCEEEEEETTTTE
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccccccC---------ceEeEeCCCEEEEEEEcCccEEEEEECCCCc
Confidence 8888888 6667777676644333322211111111100 5799999999888754 88888 766665
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=2e-06 Score=89.71 Aligned_cols=113 Identities=7% Similarity=-0.084 Sum_probs=78.5
Q ss_pred CEeEEEEcCCCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+..++|||||++|+.+.+..| +|++||+.+...... .+.. ..+..++|+|+++.|+.++.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----------~~~~---~~~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----------VLER---VKFSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----------EEEE---ECSCCEEECTTSSEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----------cccC---cccceEEEEeCCCEEEEEEEC
Confidence 5789999999999876654444 899999987542110 0000 125679999999999999888
Q ss_pred Ce----------------EEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e----
Q psy2085 123 GK----------------VEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S---- 178 (358)
Q Consensus 123 Gt----------------V~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a---- 178 (358)
+. |.+|++.++... -......+... . ..+.|+|||++|+. .
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~----~-----------~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKW----M-----------GGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTC----E-----------EEEEECTTSCEEEEEEECSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeE----E-----------EEEEEcCCCCEEEEEEEccCC
Confidence 76 999999887632 22222211100 0 56899999998873 2
Q ss_pred -c-ceEEEECCC
Q psy2085 179 -D-DDQAWTKEI 188 (358)
Q Consensus 179 -D-~IKIWD~~t 188 (358)
+ .|.+||+.+
T Consensus 257 ~~~~l~~~d~~~ 268 (710)
T 2xdw_A 257 PVNRLWYCDLQQ 268 (710)
T ss_dssp SCCEEEEEEGGG
T ss_pred CccEEEEEECcc
Confidence 5 899999986
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.7e-05 Score=73.87 Aligned_cols=151 Identities=9% Similarity=0.027 Sum_probs=90.6
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.+.+..+++..+..|+...+ +++..|..+. .++++.++|||+.|+ + +++.|.+||. +..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG-------------~~~w~~~~~~~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~ 68 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTK-------------EIVWEYPLEKGWECNSVAATKAGEILF-S--YSKGAKMITR-DGREL 68 (276)
T ss_dssp EEEEECTTCSEEEEEETTTT-------------EEEEEEECCTTCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEE
T ss_pred cEEEeeCCCCEEEEEECCCC-------------eEEEEeCCCccCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEE
Confidence 46778888888888884334 2445555443 588999999998665 3 4678888887 44333
Q ss_pred eeeecc--CceE-------------------EEEEeecCCC---------------CCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 82 FERCFD--SEVV-------------------TFEILSDDYS---------------SELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 82 ~~r~~d--~e~v-------------------~f~~LS~D~s---------------~~In~i~~np~~~llasGs~DGtV 125 (358)
.+.... .++. ....++++.. .....+++.++++++++.+.+|.|
T Consensus 69 W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v 148 (276)
T 3no2_A 69 WNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEV 148 (276)
T ss_dssp EEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEE
T ss_pred EEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEE
Confidence 222111 0100 0111111111 012233445566666666666666
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~~tG~ 190 (358)
.+||+. ++.+-++..+.. |.++.+.++|+.+++ .+ .|..+|..||+
T Consensus 149 ~~~d~~-G~~~w~~~~~~~------------------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 149 REIAPN-GQLLNSVKLSGT------------------PFSSAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp EEECTT-SCEEEEEECSSC------------------CCEEEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred EEECCC-CCEEEEEECCCC------------------ccceeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 666665 666665554322 266788899998886 44 89999999998
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.35 E-value=5e-06 Score=77.46 Aligned_cols=98 Identities=17% Similarity=0.165 Sum_probs=67.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecC--C--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK--P--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d--~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
..+.+++|||||++|+.++... + +|.+||+.+.... + +.... . +.+++|+|+++.|++++.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--~----------l~~~~--~-~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--K----------ILEAK--N-IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--E----------EEEES--E-EEEEEECTTSSEEEEEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--E----------EEcCC--C-ccceeECCCCCEEEEEEc
Confidence 3578899999999987665432 3 4777787653221 0 01111 2 789999999998888764
Q ss_pred C---------------------------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 122 E---------------------------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 122 D---------------------------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
+ ..|.+||+.+++.+..+... .+ ..+.|+|+| .
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~--~~-----------------~~~~~spdg-~ 183 (347)
T 2gop_A 124 KRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP--RF-----------------SSGIWHRDK-I 183 (347)
T ss_dssp CCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE--TT-----------------CEEEEETTE-E
T ss_pred cCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC--Cc-----------------ccccCCCCe-E
Confidence 2 57999999988764555442 22 678999999 7
Q ss_pred EEEe
Q psy2085 175 EESS 178 (358)
Q Consensus 175 llSa 178 (358)
++++
T Consensus 184 ~~~~ 187 (347)
T 2gop_A 184 VVNV 187 (347)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7664
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=1.9e-05 Score=81.45 Aligned_cols=140 Identities=11% Similarity=-0.022 Sum_probs=90.8
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc----CCC
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN----PVH 113 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n----p~~ 113 (358)
++..+........+.|||||++|++++ .++.|.+||+...+.+...... .. .....++|+ |++
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~~~v~~i~----------~G--~~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEPTTVAEIK----------IG--SEARSIETSKMEGWED 255 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSCCEEEEEE----------CC--SEEEEEEECCSTTCTT
T ss_pred EEEEEeCCCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCCcEeEEEe----------cC--CCCceeEEccccCCCC
Confidence 455555555678999999999998764 6889999999521222211111 00 235789999 699
Q ss_pred CEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCc-----------ccc-ccCCCc------cc--cc--------------
Q psy2085 114 QLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNC-----------ISN-ERDTEE------KE--GK-------------- 158 (358)
Q Consensus 114 ~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~-----------v~~-~~~i~g------l~--Gt-------------- 158 (358)
+++.+++. +++|.++|..+.+.+.++...... +.. ..+.++ +. |+
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v 335 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT 335 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee
Confidence 87666654 699999999999998887643210 000 001100 00 11
Q ss_pred ----cCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 159 ----ASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 159 ----Rs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
....|..+.|+|+|++++.+ + .|.++|..+++
T Consensus 336 ~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 336 TEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred eeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 01123678999999998753 3 99999999998
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.5e-05 Score=72.79 Aligned_cols=112 Identities=10% Similarity=0.052 Sum_probs=81.4
Q ss_pred CEeEEEEcCCCCEEEEEEe-cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 47 VSTSVRISPDGQYVLSTGI-YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~-~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
....+++ ++..|+++.. .+++|.+||+.+..+. .... . . ...+.++++|++.+++++..+
T Consensus 132 ~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~--~~i~--------~--g--~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 132 STEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVV--DELT--------I--G--IQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp BCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEE--EEEE--------C--S--SCBCCCEECTTSEEEEEBCCBCTT
T ss_pred CcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEE--EEEE--------c--C--CCccceEEcCCCCEEEEECCCccC
Confidence 4456677 4556766654 4789999999875432 1110 0 0 245788999999988776655
Q ss_pred -------CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 123 -------GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 123 -------GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
+.|.+||+.+++.+..+..+... .|..|+|+|+++.|+.++ .|.+||..+++
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~----------------~p~~la~~~d~~~lyv~~~~v~~~d~~t~~ 255 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGD----------------WPSEVQLNGTRDTLYWINNDIWRMPVEADR 255 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTC----------------CCEEEEECTTSCEEEEESSSEEEEETTCSS
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCC----------------CceeEEEecCCCEEEEEccEEEEEECCCCc
Confidence 89999999999888777653211 117899999999999999 99999999876
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.27 E-value=5.4e-06 Score=86.40 Aligned_cols=113 Identities=7% Similarity=-0.120 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEE----ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCe--eEEEEcCCCCEEEEE
Q psy2085 46 GVSTSVRISPDGQYVLSTG----IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSEL--NSIAINPVHQLICVG 119 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG----~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~I--n~i~~np~~~llasG 119 (358)
..+..++|||||++|+.+. +...+|++||+.+.......+. ..+ ..++|+|+++.|+.+
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~---------------~~~~~~~~~wspDg~~l~~~ 185 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI---------------EGGKYATPKWTPDSKGFYYE 185 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB---------------SCCTTCCCEECTTSSEEEEE
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc---------------CcccccceEEecCCCEEEEE
Confidence 3588999999999986543 3346899999987543100011 122 678999999999999
Q ss_pred eCCCe-------------EEEEeCCCCcee--EEEeCCCC--ccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-
Q psy2085 120 TIEGK-------------VEAWDPRMKVKA--GTLDCAFN--CISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D- 179 (358)
Q Consensus 120 s~DGt-------------V~iWD~Rs~~~i--~~L~~~~~--~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D- 179 (358)
+.|++ |.+|++.++..- -......+ .+ ..+.|||||++|+. + +
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~-----------------~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF-----------------LQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE-----------------EEEEECTTSCCEEEEEEET
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE-----------------EEEEECCCCCEEEEEEeCC
Confidence 98877 999999887632 22222211 12 56889999988773 2 1
Q ss_pred ----ceEEEECCCCc
Q psy2085 180 ----DDQAWTKEIKK 190 (358)
Q Consensus 180 ----~IKIWD~~tG~ 190 (358)
.|.+||..+|+
T Consensus 249 ~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 249 WSENDVYWKRPGEKD 263 (695)
T ss_dssp TTEEEEEEECTTCSS
T ss_pred CCceEEEEEcCCCCc
Confidence 56666665544
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-05 Score=75.80 Aligned_cols=115 Identities=10% Similarity=0.007 Sum_probs=77.3
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC------CCCEEEEEeC
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP------VHQLICVGTI 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np------~~~llasGs~ 121 (358)
...|+++|++..|+++....++|++||..+..+ .+.. ..+.....+.+++++| ++.++++.+.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~---------~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~ 266 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREI---------KHASFGRNVFAISYIPGFLFAVNGKPYFGDQE 266 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEE---------CCTTTTTCEEEEEEETTEEEEEECCCCTTCSC
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEE---------eccccCCCcceeeecCCEEEEeCCCEEeccCC
Confidence 689999999556777877889999999874332 1111 1112225678888998 3333333344
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
+++|.+||+.+++.+.++...... ...|..|+|+|+|..+++ .+ .|++|++.
T Consensus 267 ~~~v~~~~~~~g~~~~~~~~~~~~--------------~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 267 PVQGFVMNFSSGEIIDVFKPVRKH--------------FDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCCEEEEETTTCCEEEEECCSSSC--------------CSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CcEEEEEEcCCCeEEEEEcCCCCc--------------cCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 569999999999988887421111 011278999999965555 34 99999975
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=5.5e-05 Score=71.12 Aligned_cols=130 Identities=9% Similarity=0.019 Sum_probs=81.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEe-CC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGT-IE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs-~D 122 (358)
....|+++|+|+ |+++...+++|++||..... +.......... ..+..-...+.|+++| ++.++++.+ .+
T Consensus 92 ~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g-----~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 92 LPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPG-----SDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCC-----CSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCC-----CCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 578999999999 55677778899999986431 11000000000 0011114688999999 789999987 79
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCCCc
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
+.|.+|| .++..+..+.......... . .....|..|+|+|++..|+.+ + .|++||..+|+
T Consensus 166 ~~I~~~~-~~g~~~~~~~~~g~~~~~~--~-----~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 166 SRIVQFS-PSGKFVTQWGEESSGSSPR--P-----GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp CEEEEEC-TTSCEEEEECEECCSSSCC--T-----TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred CeEEEEc-CCCCEEEEeccCCCCCCCC--C-----cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 9999999 5677666664221110000 0 001123889999995445433 3 99999999887
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.20 E-value=6.3e-05 Score=68.94 Aligned_cols=112 Identities=7% Similarity=-0.012 Sum_probs=77.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcC-CCce-eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETD-NLSM-KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~-~lsl-k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
....+.++|+|||+.| ++.+.+++|.+||+. +..+ ...+ .+ ......+..|++.++++++++. +
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~----------~~-~~~~~~p~~i~~d~~G~l~v~~--~ 236 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGV----------HF-TVEPGKTDGLRVDAGGLIWASA--G 236 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEE----------EE-CCSSSCCCSEEEBTTSCEEEEE--T
T ss_pred CCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCe----------Ee-eCCCCCCCeEEECCCCCEEEEc--C
Confidence 3456899999999988 777778899999986 3222 1111 11 1111456789999999988776 8
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEE-cCCCCEEEE-ec-ceEEEECCCC
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE-EEEEEEEES-SD-DDQAWTKEIK 189 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f-s~d~~~llS-aD-~IKIWD~~tG 189 (358)
+.|.+||+. ++.+..+..+.. + .++.| +|+++.|+. +. .+--++..++
T Consensus 237 ~~v~~~~~~-g~~~~~~~~~~~-~-----------------~~~~f~~~d~~~L~v~t~~~l~~~~~~~~ 287 (296)
T 3e5z_A 237 DGVHVLTPD-GDELGRVLTPQT-T-----------------SNLCFGGPEGRTLYMTVSTEFWSIETNVR 287 (296)
T ss_dssp TEEEEECTT-SCEEEEEECSSC-C-----------------CEEEEESTTSCEEEEEETTEEEEEECSCC
T ss_pred CeEEEECCC-CCEEEEEECCCC-c-----------------eeEEEECCCCCEEEEEcCCeEEEEEcccc
Confidence 999999996 777788876654 3 77899 588887764 33 4434455443
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-05 Score=68.46 Aligned_cols=115 Identities=9% Similarity=0.045 Sum_probs=80.1
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
...++++++|+|+ |+++...++.|.+||...... +.. -.......++.|+++|++.++++.+.++.|
T Consensus 121 ~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~---~~~---------~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 121 QHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNVL---HKF---------GCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp SCEEEEEECTTSC-EEEEETTTTEEEEECTTSCEE---EEE---------ECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred CCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCEE---EEe---------CCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 3578999999998 445666678999999653211 110 001111468999999999999998889999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c--ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D--DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D--~IKIWD~~tG~ 190 (358)
.+||+ ++..+..+..+... ..|..|+++++|..+++. + .|.+||.. |+
T Consensus 188 ~~~~~-~g~~~~~~~~~g~~---------------~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~ 239 (286)
T 1q7f_A 188 KVFNY-EGQYLRQIGGEGIT---------------NYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQ 239 (286)
T ss_dssp EEEET-TCCEEEEESCTTTS---------------CSEEEEEECTTCCEEEEECSSSCEEEEECTT-SC
T ss_pred EEEcC-CCCEEEEEccCCcc---------------CCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CC
Confidence 99997 45566666432110 012789999999887763 3 79999964 55
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.18 E-value=5.9e-06 Score=78.04 Aligned_cols=121 Identities=8% Similarity=-0.041 Sum_probs=74.5
Q ss_pred eCCCCEeEEEEcC-CCCEEEEEEec-----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCE
Q psy2085 43 EMPGVSTSVRISP-DGQYVLSTGIY-----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQL 115 (358)
Q Consensus 43 e~~~~v~~v~~Sp-DG~~LlatG~~-----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~l 115 (358)
..+..+..++||| ||++|+.+... ...|.++|+.....+.. . .... ..+..++|+|+++.
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~-----------~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 185 QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV--K-----------THAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEES--C-----------CCCTTEEEEEEEECTTSSC
T ss_pred cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEe--e-----------eCCCCcccccceECCCCCE
Confidence 3456689999999 99988665432 23677778764322111 0 0000 13677899999997
Q ss_pred EEEEeC-C----CeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-----------
Q psy2085 116 ICVGTI-E----GKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES----------- 177 (358)
Q Consensus 116 lasGs~-D----GtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS----------- 177 (358)
|+..+. + +.|.+||+.+++.. ..+..+.... ... ..+.|+|||+.|+.
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~---~~~-----------~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM---SNY-----------DGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEE---ECT-----------TSSEEEEEECCC------------C
T ss_pred EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeee---ecC-----------CCCeEccCCCcceeEeeeccccccC
Confidence 665443 2 24999999998743 3333211100 001 33689999998772
Q ss_pred ec-ceEEEECCCCc
Q psy2085 178 SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 aD-~IKIWD~~tG~ 190 (358)
.+ .|.+||+.+|+
T Consensus 318 ~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 318 NDPFLYVFNMKNGT 331 (388)
T ss_dssp CCCEEEEEETTTTE
T ss_pred CCCEEEEEeccCCc
Confidence 24 89999999887
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.18 E-value=4.4e-05 Score=72.09 Aligned_cols=121 Identities=9% Similarity=-0.033 Sum_probs=83.8
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC--CCCCeeEEEEcCCCCEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD--YSSELNSIAINPVHQLIC 117 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D--~s~~In~i~~np~~~lla 117 (358)
..+........++++||| .|.++..+++.|.+||+.+..+. +.. .+... .......+++ ..+.+++
T Consensus 78 ~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~--~~i--------~~g~~~~~~~~p~~i~~-~~~~lyv 145 (328)
T 3dsm_A 78 GRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEIT--GYI--------ECPDMDMESGSTEQMVQ-YGKYVYV 145 (328)
T ss_dssp EEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEE--EEE--------ECTTCCTTTCBCCCEEE-ETTEEEE
T ss_pred EEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEE--EEE--------EcCCccccCCCcceEEE-ECCEEEE
Confidence 333434567899999999 57676668899999999875432 111 01000 0013456777 4555666
Q ss_pred EEe-CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-------------ceEE
Q psy2085 118 VGT-IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-------------DDQA 183 (358)
Q Consensus 118 sGs-~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-------------~IKI 183 (358)
+.. .+++|.+||+.+++.+.++.....+ ..|.++|+|+.++++. .|.+
T Consensus 146 ~~~~~~~~v~viD~~t~~~~~~i~~g~~p------------------~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDKVVDELTIGIQP------------------TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp EECTTCCEEEEEETTTTEEEEEEECSSCB------------------CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEE
T ss_pred EcCCCCCEEEEEECCCCeEEEEEEcCCCc------------------cceEEcCCCCEEEEECCCccCCccccCCceEEE
Confidence 654 4899999999999988888765443 6789999998777632 4899
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||..+++
T Consensus 208 id~~t~~ 214 (328)
T 3dsm_A 208 IDAETFT 214 (328)
T ss_dssp EETTTTE
T ss_pred EECCCCe
Confidence 9999887
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.16 E-value=0.00013 Score=67.66 Aligned_cols=105 Identities=9% Similarity=-0.031 Sum_probs=73.6
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC-
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE- 122 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D- 122 (358)
......+++|+|||+ |+++++.++.|.+||..+...... . ... ...+.+++++|++.+++++..+
T Consensus 43 ~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~~----------~-~~~--~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRP----------F-VSH--KANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEE----------E-ECS--SSSEEEEEECTTSCEEEEECTTS
T ss_pred cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEEE----------e-eCC--CCCcceEEECCCCcEEEEeCCCC
Confidence 344578999999998 556777889999999876432210 0 011 1568999999999999887777
Q ss_pred ---CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 123 ---GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 123 ---GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
+.|.+||+.++.....+...... ..|..|.|+|+|..+++
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~---------------~~~~~i~~d~~g~l~v~ 151 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTA---------------YCIDDMVFDSKGGFYFT 151 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSC---------------CCEEEEEECTTSCEEEE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccC---------------CcccceEECCCCCEEEE
Confidence 79999999887654344311110 01178999999988776
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.5e-05 Score=73.49 Aligned_cols=116 Identities=9% Similarity=-0.081 Sum_probs=76.1
Q ss_pred eCCCCEeEEEEcC-CCCEEEEEEecC-----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 43 EMPGVSTSVRISP-DGQYVLSTGIYK-----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 43 e~~~~v~~v~~Sp-DG~~LlatG~~d-----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
..+..+..+.||| ||+.|+.++... .+|.+||+.....+. ..... + ...+..++|+|+++.|
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~--l~~~~--------~--~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK--IKEHA--------E--GESCTHEFWIPDGSAM 252 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE--SSCCC--------T--TEEEEEEEECTTSSCE
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE--eeccC--------C--CccccceEECCCCCEE
Confidence 3456688999999 898776544211 368888876432211 00000 0 0247789999999977
Q ss_pred EEEeCC-----CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE-------------
Q psy2085 117 CVGTIE-----GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES------------- 177 (358)
Q Consensus 117 asGs~D-----GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS------------- 177 (358)
++++.+ +.|.+||+.+++.......+ .. . +.|+| +|+.|++
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~--~~-----------------~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVMP--PC-----------------S-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEECC--SE-----------------E-EEEECSSSSEEEEEECCC--------
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeCC--CC-----------------C-CCccCCCCceEEEecCCcceeecccc
Confidence 776554 55999999988754332221 11 3 78999 9998875
Q ss_pred -----ec-ceEEEECCCCc
Q psy2085 178 -----SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 -----aD-~IKIWD~~tG~ 190 (358)
.+ .|.+||..+|+
T Consensus 313 ~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp --CCCCCCEEEEEETTTTB
T ss_pred ccccCCCCcEEEEecccCc
Confidence 24 89999998886
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.4e-05 Score=72.74 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEE--------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 46 GVSTSVRISPDGQYVLSTG--------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG--------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
..+..+++ ||++|+.+. .+...|.+||+.+.... . + ..+.+++|+|+++.||
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~----------l-----~~~~~~~~SpDg~~la 74 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---F----------I-----ENATMPRISPDGKKIA 74 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---E----------E-----ESCEEEEECTTSSEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---E----------c-----ccCCCeEECCCCCEEE
Confidence 34677788 999987542 24667999998764321 1 1 2478899999999988
Q ss_pred EEeCC---Ce--EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-------------
Q psy2085 118 VGTIE---GK--VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S------------- 178 (358)
Q Consensus 118 sGs~D---Gt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a------------- 178 (358)
+++.+ +. |.+||+.+++.......+. + ..+.|+|+|+.|+. +
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--~-----------------~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKILEAKN--I-----------------RSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEESE--E-----------------EEEEECTTSSEEEEEEECCCC--------
T ss_pred EEEeccCCCcceEEEEECCCCceEEEEcCCC--c-----------------cceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 87754 34 7778988877655444332 3 67999999998874 2
Q ss_pred ---------------c-ceEEEECCCCcE
Q psy2085 179 ---------------D-DDQAWTKEIKKT 191 (358)
Q Consensus 179 ---------------D-~IKIWD~~tG~~ 191 (358)
. .|.+||+.+|+.
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeE
Confidence 4 789999998874
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.12 E-value=2.5e-05 Score=75.08 Aligned_cols=89 Identities=11% Similarity=0.012 Sum_probs=66.9
Q ss_pred EEEcCCCCEEEEEEe----------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 51 VRISPDGQYVLSTGI----------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 51 v~~SpDG~~LlatG~----------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
++|+|||++++++.. ...+|.+||+.+... .+.+ .-. . +.+|+|+|++++|++++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i----------~~~--~-p~~ia~spdg~~l~v~n 323 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARI----------PGR--D-ALSMTIDQQRNLMLTLD 323 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEE----------ECT--T-CCEEEEETTTTEEEEEC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEE----------ecC--C-eeEEEECCCCCEEEEeC
Confidence 789999998887654 134899999987532 1111 111 3 78999999999888888
Q ss_pred CCCeEEEEeCCCC--ceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 121 IEGKVEAWDPRMK--VKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 121 ~DGtV~iWD~Rs~--~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
. ++|.+||+.++ +.++++. ....+ ..+.|+|+|+
T Consensus 324 ~-~~v~v~D~~t~~l~~~~~i~~~G~~P------------------~~~~~~p~G~ 360 (361)
T 2oiz_A 324 G-GNVNVYDISQPEPKLLRTIEGAAEAS------------------LQVQFHPVGG 360 (361)
T ss_dssp S-SCEEEEECSSSSCEEEEEETTSCSSE------------------EEEEECCCSC
T ss_pred C-CeEEEEECCCCcceeeEEeccCCCCc------------------EEEEecCCCC
Confidence 7 99999999999 9999984 33333 6788999885
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.11 E-value=6.6e-05 Score=68.79 Aligned_cols=113 Identities=12% Similarity=-0.029 Sum_probs=78.3
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ 114 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ 114 (358)
+++.+.. ......++.|+|+|+.|+.+++.++.|.+||..+. ... . ..+ ...+++++++|++.
T Consensus 19 ~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~---~---------~~~--~~~~~~l~~~~dg~ 81 (296)
T 3e5z_A 19 EARRLAD--GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSP---E---------MHP--SHHQNGHCLNKQGH 81 (296)
T ss_dssp CCEEEEC--CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEE---E---------ESS--CSSEEEEEECTTCC
T ss_pred cEEEEec--CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEE---E---------ECC--CCCcceeeECCCCc
Confidence 4455542 23346799999999977778888999999998764 211 1 001 14689999999999
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++++.+.++.|.+||+.+++....+....... ...|+.|.++|+|+.++|
T Consensus 82 l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-------------~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 82 LIACSHGLRRLERQREPGGEWESIADSFEGKK-------------LNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp EEEEETTTTEEEEECSTTCCEEEEECEETTEE-------------CCCCCCEEECTTSCEEEE
T ss_pred EEEEecCCCeEEEEcCCCCcEEEEeeccCCCC-------------CCCCCCEEECCCCCEEEE
Confidence 99988888999999998887543332111100 011267999999998886
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.09 E-value=9.3e-05 Score=69.48 Aligned_cols=120 Identities=9% Similarity=-0.017 Sum_probs=70.6
Q ss_pred CEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEe-
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGT- 120 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs- 120 (358)
.+..+.|||||++|+.++..+ +.|.+||+.+...+.... + ..++ +.|+| ++.++++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~----------~-----~~~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV----------M-----PPCS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE----------C-----CSEE-EEEECSSSSEEEEEEC
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee----------C-----CCCC-CCccCCCCceEEEecC
Confidence 477899999999886654322 349999997643221110 0 2344 88999 999888765
Q ss_pred ---------------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c-ce
Q psy2085 121 ---------------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D-DD 181 (358)
Q Consensus 121 ---------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D-~I 181 (358)
.++.|.+||+.+++.. .|..+...+.. +.. .+...+..+.|+|+|+.|+. + + ..
T Consensus 303 ~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~-~~~-----~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 375 (396)
T 3c5m_A 303 DAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDV-LDG-----DRQITHPHPSFTPNDDGVLFTSDFEGVP 375 (396)
T ss_dssp CC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCC-BTT-----BSSTTCCCCEECTTSSEEEEEECTTSSC
T ss_pred CcceeeccccccccCCCCcEEEEecccCceE-EccCCCCcccc-ccc-----cccCCCCCceEccCCCeEEEEecCCCCc
Confidence 3478999999887643 34333221000 000 00000056799999998874 3 2 55
Q ss_pred EEE--ECCCC
Q psy2085 182 QAW--TKEIK 189 (358)
Q Consensus 182 KIW--D~~tG 189 (358)
.|| |+.++
T Consensus 376 ~l~~~~~~~~ 385 (396)
T 3c5m_A 376 AIYIADVPES 385 (396)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEEccc
Confidence 555 44443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00017 Score=65.77 Aligned_cols=117 Identities=6% Similarity=0.102 Sum_probs=82.6
Q ss_pred CEeEEEEc----CCCCEEEEEEecCCeEEEEEcC-CCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCEEEEEe
Q psy2085 47 VSTSVRIS----PDGQYVLSTGIYKPRVRCYETD-NLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQLICVGT 120 (358)
Q Consensus 47 ~v~~v~~S----pDG~~LlatG~~d~~IrvwDl~-~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~llasGs 120 (358)
..+.++++ |||++|+++...++.|.+||+. +..+.... .+..+ +... ..+..+++++++.++++..
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~-------~~~~~-~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK-------VWGHI-PGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEE-------EEEEC-CCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccce-------EEEEC-CCCCCCCCCceEECCCCCEEEEEc
Confidence 45889999 9998887777677899999976 22211000 01111 1111 3478899999999999888
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-E-e-c-ceEEEECCC
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S-S-D-DDQAWTKEI 188 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-a-D-~IKIWD~~t 188 (358)
.++.|.+||+.+++.+..+..+...+ .+++|+++++.|+ + . + .|..||...
T Consensus 245 ~~~~i~~~d~~~g~~~~~~~~~~~~~-----------------~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 245 GSSHIEVFGPDGGQPKMRIRCPFEKP-----------------SNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCE-----------------EEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCEEEEEcCCCCcEeEEEeCCCCCc-----------------eeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 89999999998888777776553332 7899999999554 4 2 3 888888864
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.05 E-value=0.00027 Score=65.39 Aligned_cols=115 Identities=7% Similarity=0.009 Sum_probs=75.0
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
.+..+.+++++|||+.+++ +..+ +.|.+||..+..... ... .......+++++++|++.++++.
T Consensus 85 ~~~~~~~i~~~~dg~l~v~-~~~~~~~~~~i~~~d~~~~~~~~--~~~---------~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 85 HKANPAAIKIHKDGRLFVC-YLGDFKSTGGIFAATENGDNLQD--IIE---------DLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp SSSSEEEEEECTTSCEEEE-ECTTSSSCCEEEEECTTSCSCEE--EEC---------SSSSCCCEEEEEECTTSCEEEEE
T ss_pred CCCCcceEEECCCCcEEEE-eCCCCCCCceEEEEeCCCCEEEE--EEc---------cCccCCcccceEECCCCCEEEEe
Confidence 4567999999999986544 3334 589999987643321 000 00011468999999999988876
Q ss_pred eC------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee--c-ceEEEECCC
Q psy2085 120 TI------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS--D-DDQAWTKEI 188 (358)
Q Consensus 120 s~------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa--D-~IKIWD~~t 188 (358)
.. .+.|..||+.+++..........+ ..+.|+|+|+.|+ +. + .|.+||..+
T Consensus 153 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------------~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 153 FRGYSTNPLGGVYYVSPDFRTVTPIIQNISVA------------------NGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCCBTTBCCEEEEEECTTSCCEEEEEEEESSE------------------EEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccccccCCCceEEEEeCCCCEEEEeecCCCcc------------------cceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 54 367777787665543322211111 6799999998665 42 4 899999964
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00017 Score=75.12 Aligned_cols=130 Identities=14% Similarity=0.072 Sum_probs=83.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEec----CCeEEEEEcCC------C--cee-eeeeccCceEE-------EEEeec-C---
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIY----KPRVRCYETDN------L--SMK-FERCFDSEVVT-------FEILSD-D--- 99 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~------l--slk-~~r~~d~e~v~-------f~~LS~-D--- 99 (358)
++..+..+.|||||++|+.++.. +..|.+||+.+ . ..+ +..+.+..... +.+++. +
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCC
Confidence 35557899999999999776531 56899999864 2 111 11111111000 111111 0
Q ss_pred ---------------CC--------CCeeEEEEcCCCCEEEEEeCCCe--EEEEeCCCCceeEEEeCCCCccccccCCCc
Q psy2085 100 ---------------YS--------SELNSIAINPVHQLICVGTIEGK--VEAWDPRMKVKAGTLDCAFNCISNERDTEE 154 (358)
Q Consensus 100 ---------------~s--------~~In~i~~np~~~llasGs~DGt--V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~g 154 (358)
+. ..|..++|++.+.+++++..||. |.+||+.+++.+..|..+...+
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v-------- 382 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSV-------- 382 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEE--------
T ss_pred CEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceE--------
Confidence 00 14777888888889999988885 5567877787777777654333
Q ss_pred cccccCCCceeeEEcCCCCEEE-E--e---c-ceEEEECCCCc
Q psy2085 155 KEGKASSDESSEEEEEEEEEEE-S--S---D-DDQAWTKEIKK 190 (358)
Q Consensus 155 l~GtRs~~P~sI~fs~d~~~ll-S--a---D-~IKIWD~~tG~ 190 (358)
..+.++|+++.|+ + + . +|.+||+.+|+
T Consensus 383 ---------~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 383 ---------VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ---------EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ---------EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5688899887665 2 2 2 89999998876
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.03 E-value=0.00012 Score=67.82 Aligned_cols=105 Identities=15% Similarity=0.084 Sum_probs=77.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETD--NLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
..+.++|+|||++|.++.+..++|.+||+. +..+...+. +..+.. ..+....+++.+++++.++...++.
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~-------~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~ 221 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS-------VYKLEK-EEQIPDGMCIDAEGKLWVACYNGGR 221 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE-------EEECCG-GGCEEEEEEEBTTSCEEEEEETTTE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE-------EEECCC-CCCCCCeeEECCCCCEEEEEcCCCE
Confidence 458999999999988888888899999984 332211110 111111 1135688999999999998888899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
|.+||+.+++.+..+..+...+ .+++|. |+++.|+
T Consensus 222 v~~~d~~tG~~~~~i~~p~~~~-----------------t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 222 VIRLDPVTGKRLQTVKLPVDKT-----------------TSCCFGGKNYSEMY 257 (297)
T ss_dssp EEEECTTTCCEEEEEECSSSBE-----------------EEEEEESGGGCEEE
T ss_pred EEEEcCCCceEEEEEECCCCCc-----------------eEEEEeCCCCCEEE
Confidence 9999999999999988764433 789998 7887665
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.97 E-value=5.2e-05 Score=79.60 Aligned_cols=113 Identities=7% Similarity=-0.144 Sum_probs=74.2
Q ss_pred CEeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.+..++|||||++|+.+.+.. .+|++||+.+....-. . + .. ..+..++|+|+ +.|+.++.|
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~---------~-~~---~~~~~~~wspD-~~l~~~~~~ 228 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-E---------L-KW---VKFSGLAWLGN-DALLYSRFA 228 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-E---------E-EE---EESCCCEESTT-SEEEEEECC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-c---------C-CC---ceeccEEEECC-CEEEEEEec
Confidence 578999999999987665433 3699999987543110 0 0 00 11357899999 988888876
Q ss_pred Ce--------------EEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e------c
Q psy2085 123 GK--------------VEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S------D 179 (358)
Q Consensus 123 Gt--------------V~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a------D 179 (358)
+. |.+|++.++... -......++.. . .++.|||||++|+. + .
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~----~-----------~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKR----G-----------HGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTC----E-----------EEEEECTTSCEEEEEEECTTCSC
T ss_pred CcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeE----E-----------EEEEECCCCCEEEEEEEccCCCc
Confidence 64 889998777632 22222221100 0 56899999998773 2 2
Q ss_pred -ceEEEECCCC
Q psy2085 180 -DDQAWTKEIK 189 (358)
Q Consensus 180 -~IKIWD~~tG 189 (358)
.|.+||+.+|
T Consensus 294 ~~l~~~d~~~~ 304 (741)
T 1yr2_A 294 NTVHVARVTNG 304 (741)
T ss_dssp CEEEEEEEETT
T ss_pred ceEEEEECCCC
Confidence 7889998665
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=0.00012 Score=75.54 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=78.6
Q ss_pred CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCC--CCc
Q psy2085 57 GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPR--MKV 134 (358)
Q Consensus 57 G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~R--s~~ 134 (358)
+..++++...+++|.++|+.+..+.. .+. -. ..+..+.|+|++.++.+++.||.|.+||+. +++
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~--~i~----------~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~ 231 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKT--VLD----------TG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 231 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEE--EEE----------CS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEE--EEe----------CC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCc
Confidence 34566777788999999998754321 110 01 246789999999999889999999999996 888
Q ss_pred eeEEEeCCCCccccccCCCccccccCCCceeeEEc----CCCCEEEEe---c-ceEEEECCCCc
Q psy2085 135 KAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE----EEEEEEESS---D-DDQAWTKEIKK 190 (358)
Q Consensus 135 ~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs----~d~~~llSa---D-~IKIWD~~tG~ 190 (358)
.+..+.....+ ..|.|+ |+|++++.+ + +|.|+|..+++
T Consensus 232 ~v~~i~~G~~P------------------~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 232 TVAEIKIGSEA------------------RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp EEEEEECCSEE------------------EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred EeEEEecCCCC------------------ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 88888765544 679999 699988853 3 99999998877
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=97.91 E-value=0.00023 Score=70.17 Aligned_cols=100 Identities=9% Similarity=-0.037 Sum_probs=70.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
...+.++++.+.. +++++.+|+|.+||+.+.... . +. ..|.|++|||.| ++.|..||+
T Consensus 126 ~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~--~-----------~~----~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 126 EKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTK--Q-----------LA----QNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEE--E-----------EE----ESEEEEEECSSE--EEEEETTSC
T ss_pred ecceeeEEecCCC---EEEEECCCCEEEEEccCCccc--c-----------cc----CCceEEEEcCCc--eEEEEcCCc
Confidence 3446777777653 355678999999999865432 1 11 469999999999 688999999
Q ss_pred EEEEeCCCCce--eEEEeCCCCcc---ccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 125 VEAWDPRMKVK--AGTLDCAFNCI---SNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 125 V~iWD~Rs~~~--i~~L~~~~~~v---~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
|++|++..+.. .++|.++...- ...+.+ .+|.|.+++.++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V-----------~sI~wl~~~~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSP-----------LSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEE-----------EEEEESSSSEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeE-----------EEEEEecCCeEEEE
Confidence 99999988875 67774321110 001112 78999999988886
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.82 E-value=2.3e-05 Score=81.31 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=90.7
Q ss_pred EEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeecc--CceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 39 IQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFD--SEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 39 iqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d--~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
+..+..+....+|.+||||+|+++++...++|.++|+.++...+...++ ..++. . +..+ .+-..++|+|++.+.
T Consensus 270 ~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~-v~vG--~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 270 TRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-E-PELG--LGPLHTAFDGRGNAY 345 (595)
T ss_dssp EEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-C-CBCC--SCEEEEEECTTSEEE
T ss_pred EEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-E-cCCC--CCcceEEECCCCeEE
Confidence 3444445566789999999999999988999999999854211111111 11111 0 1111 467899999999666
Q ss_pred EEEeCCCeEEEEeCCC----------CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-----cce
Q psy2085 117 CVGTIEGKVEAWDPRM----------KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-----DDD 181 (358)
Q Consensus 117 asGs~DGtV~iWD~Rs----------~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-----D~I 181 (358)
.+---|++|..||+.+ ...+.+++.+..+.-.+.+ ..+.++|||++|+++ |.+
T Consensus 346 ~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~------------~g~t~~~DGk~l~~~Nk~skdr~ 413 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTV------------MGETLDATNDWLVCLSKFSKDRF 413 (595)
T ss_dssp EEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEET------------TTTSTTCCSSEEEEEESCCTTSS
T ss_pred EEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceec------------cceEeCCCCCEEEEcCCCCcccc
Confidence 6777799999999977 5678888887664200000 234568999999874 344
Q ss_pred -----------EEEECCCCc
Q psy2085 182 -----------QAWTKEIKK 190 (358)
Q Consensus 182 -----------KIWD~~tG~ 190 (358)
.+.|+..++
T Consensus 414 ~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 414 LNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCCCSSCCEEEEEEECSSSS
T ss_pred ccCCCCCCCcceEEEcCCCc
Confidence 789996666
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00024 Score=63.49 Aligned_cols=111 Identities=11% Similarity=-0.037 Sum_probs=76.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..++++++|+|+ |.++....+.|.+||......... . ......++.|+++|++.++++...++.|.
T Consensus 151 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~--~-----------~~~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 151 DPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVVL--P-----------FTDITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp SCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEEC--C-----------CSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred CceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEee--c-----------ccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence 467899999998 455555578999999875432110 0 00014578999999999999888899999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCC
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEI 188 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~t 188 (358)
+||+...........+.. .|..|+++++|+.+++ .+ .|++++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~-----------------~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLN-----------------TPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp EECTTCSCCEECCCCSCS-----------------CEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred EEcCCCCcceeeccCCCC-----------------CceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 999876543221111111 1278999999986666 35 999998864
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00049 Score=63.60 Aligned_cols=119 Identities=13% Similarity=0.091 Sum_probs=73.6
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC-CCCeeEEEEcCCCCEEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY-SSELNSIAINPVHQLICV 118 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-s~~In~i~~np~~~llas 118 (358)
+.+.++..+.++.++|||++++++ ...|.+||..+..++..... .++. ...+|.+++.|++.++++
T Consensus 48 ~~~~~~~~~~~i~~~~dG~l~v~~---~~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~~di~~d~dG~l~~~ 114 (297)
T 3g4e_A 48 QRVTMDAPVSSVALRQSGGYVATI---GTKFCALNWKEQSAVVLATV----------DNDKKNNRFNDGKVDPAGRYFAG 114 (297)
T ss_dssp EEEECSSCEEEEEEBTTSSEEEEE---TTEEEEEETTTTEEEEEEEC----------CTTCSSEEEEEEEECTTSCEEEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEE---CCeEEEEECCCCcEEEEEec----------CCCCCCCCCCCEEECCCCCEEEe
Confidence 345677889999999999965443 46899999876443211111 0110 034799999999998776
Q ss_pred EeC-----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEE
Q psy2085 119 GTI-----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQA 183 (358)
Q Consensus 119 Gs~-----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKI 183 (358)
... .|.|..+|+. ++....+..-..+ +.|+|+|+++.|+.+ + .|.+
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p------------------ngi~~spdg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 115 TMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS------------------NGLDWSLDHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp EEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE------------------EEEEECTTSCEEEEEEGGGTEEEE
T ss_pred cCCcccccccccCCCcEEEEEECC-CCEEEEeeccccc------------------cceEEcCCCCEEEEecCCCCcEEE
Confidence 432 2345555553 3222222211111 789999999977643 3 7899
Q ss_pred EEC--CCCc
Q psy2085 184 WTK--EIKK 190 (358)
Q Consensus 184 WD~--~tG~ 190 (358)
||. .+|.
T Consensus 176 ~~~d~~~G~ 184 (297)
T 3g4e_A 176 FDYDLQTGQ 184 (297)
T ss_dssp EEECTTTCC
T ss_pred EeccCCCCc
Confidence 986 4564
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00058 Score=60.92 Aligned_cols=130 Identities=9% Similarity=0.010 Sum_probs=71.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
....+++++|+|+.+ ++.. ++.|.+||........ ... . ....++.|+++|++.++++.+.++.|
T Consensus 67 ~~p~~i~~~~~g~l~-v~~~-~~~i~~~d~~~~~~~~---~~~---------~-~~~~p~~i~~~~~g~l~v~~~~~~~i 131 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVY-VTDF-NNRVVTLAAGSNNQTV---LPF---------D-GLNYPEGLAVDTQGAVYVADRGNNRV 131 (270)
T ss_dssp CSCCCEEECTTCCEE-EEET-TTEEEEECTTCSCCEE---CCC---------C-SCSSEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCcceeEECCCCCEE-EEcC-CCEEEEEeCCCceEee---eec---------C-CcCCCcceEECCCCCEEEEECCCCEE
Confidence 356789999999844 4444 7899999987532211 000 0 00346677777777766666666777
Q ss_pred EEEeCCCCceeEE----EeCCCCcc-cc-------ccCCCccc-----cc--------cCCCceeeEEcCCCCEEEEe--
Q psy2085 126 EAWDPRMKVKAGT----LDCAFNCI-SN-------ERDTEEKE-----GK--------ASSDESSEEEEEEEEEEESS-- 178 (358)
Q Consensus 126 ~iWD~Rs~~~i~~----L~~~~~~v-~~-------~~~i~gl~-----Gt--------Rs~~P~sI~fs~d~~~llSa-- 178 (358)
.+||..+...... +..+.... .. ......+. |. ....|..|+++++|...++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~ 211 (270)
T 1rwi_B 132 VKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHN 211 (270)
T ss_dssp EEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETT
T ss_pred EEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECC
Confidence 7776554432110 11111100 00 00000000 10 01234889999999776663
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ .|.+||..+..
T Consensus 212 ~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 212 TNQVVKLLAGSTT 224 (270)
T ss_dssp TSCEEEECTTCSC
T ss_pred CCcEEEEcCCCCc
Confidence 5 89999987543
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.75 E-value=0.00023 Score=70.18 Aligned_cols=114 Identities=11% Similarity=-0.020 Sum_probs=79.3
Q ss_pred EEEcCCCCEEEEEEec----CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe------
Q psy2085 51 VRISPDGQYVLSTGIY----KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT------ 120 (358)
Q Consensus 51 v~~SpDG~~LlatG~~----d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs------ 120 (358)
+...|||+.+.++-.. +++|.++|+.++... .... . +. .+ . ++++|+++.+..++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~--~~I~--------v--G~-~P-~-va~spDG~~lyVan~~~~r~ 102 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMID--------G--GF-LP-N-PVVADDGSFIAHASTVFSRI 102 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEE--------E--CS-SC-E-EEECTTSSCEEEEEEEEEET
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEE--EEEE--------C--CC-CC-c-EEECCCCCEEEEEccccccc
Confidence 4557999999888654 679999999875432 1110 1 11 22 4 99999998665544
Q ss_pred ----CCCeEEEEeCCCCceeEEEeCCCCc-cccccCCCccccccCCCceeeEEcCCCCEEEE--e--c-ceEEEECCCCc
Q psy2085 121 ----IEGKVEAWDPRMKVKAGTLDCAFNC-ISNERDTEEKEGKASSDESSEEEEEEEEEEES--S--D-DDQAWTKEIKK 190 (358)
Q Consensus 121 ----~DGtV~iWD~Rs~~~i~~L~~~~~~-v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a--D-~IKIWD~~tG~ 190 (358)
.+++|.+||+.+++.++++..+... ... ...|..+.|+|||++|+. . + .|-|+|..+++
T Consensus 103 ~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~-----------g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 103 ARGERTDYVEVFDPVTLLPTADIELPDAPRFLV-----------GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB-----------SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCcccccc-----------CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCc
Confidence 4689999999999999988753210 000 012267999999998773 2 4 89999999988
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.74 E-value=6.5e-05 Score=78.19 Aligned_cols=115 Identities=11% Similarity=-0.075 Sum_probs=68.7
Q ss_pred cCCCCEEEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE-----EEeCCCeEE
Q psy2085 54 SPDGQYVLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC-----VGTIEGKVE 126 (358)
Q Consensus 54 SpDG~~LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla-----sGs~DGtV~ 126 (358)
+|||++++-+....+ +-.||-.....-..+.-++.. .++.+++..+.+++|||+|++|| .|+++.+|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~-----~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPN-----GWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGG-----GSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchH-----HhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEE
Confidence 389999876544332 344554331111101111100 02223333588999999999998 455567999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-c-------------eEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-D-------------DQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~-------------IKIWD~~tG~ 190 (358)
+||+.+++.+. ..+...+. . ..++|+|||+.|+. .| . |++|++.++.
T Consensus 151 v~dl~tg~~~~--~~~~~~~~----~-----------~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 151 VIDVDSGEWSK--VDVIEGGK----Y-----------ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp EEETTTCCBCS--SCCBSCCT----T-----------CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred EEECCCCCCcC--CcccCccc----c-----------cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 99999987641 11111100 0 35899999998884 34 5 9999998876
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00043 Score=65.55 Aligned_cols=139 Identities=12% Similarity=0.024 Sum_probs=86.9
Q ss_pred ccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 33 RRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 33 ~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
...+++++.|. .....|+++|||+.+++...+ ++.++||.+.+..+. .-.+... ........+..|++.|
T Consensus 6 ~g~~~~v~~~~--~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~--~~p~~~~-----~~~~~~~~p~gv~~d~ 76 (343)
T 2qe8_A 6 GDRLEVVAELS--LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI--PFPPQSG-----NAIITFDTVLGIKSDG 76 (343)
T ss_dssp --CCEEEEEES--SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE--ESCCCCS-----SCCCCCSCEEEEEECS
T ss_pred CceeEEEEEcC--CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee--cCCCccc-----CcccceeEeeEEEEcC
Confidence 45778888887 668999999999865443222 233566665432221 0000000 0011125789999999
Q ss_pred CCCEEEEEeC-----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEE-EE-----ec-
Q psy2085 112 VHQLICVGTI-----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEE-ES-----SD- 179 (358)
Q Consensus 112 ~~~llasGs~-----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~l-lS-----aD- 179 (358)
++.|+++.+. ++.|.+||+.+++.+.++..+...... ...|+.|.+++++..+ ++ .+
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~-----------~~~~~~v~vd~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLS-----------NSFVNDLAVDLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCT-----------TCCCCEEEEETTTTEEEEEECCSGGGC
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhccc-----------ccccceEEEecCCCEEEEEcCccCCCC
Confidence 9988887654 689999999999888877654221100 0112789999865554 44 34
Q ss_pred ceEEEECCCCcE
Q psy2085 180 DDQAWTKEIKKT 191 (358)
Q Consensus 180 ~IKIWD~~tG~~ 191 (358)
.|.+||..+|+.
T Consensus 146 ~i~v~d~~~g~~ 157 (343)
T 2qe8_A 146 ALIRVDLQTGLA 157 (343)
T ss_dssp EEEEEETTTCCE
T ss_pred eEEEEECCCCCE
Confidence 999999998873
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00092 Score=62.85 Aligned_cols=115 Identities=9% Similarity=-0.017 Sum_probs=72.3
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC-CCCeeEEEEcCCCCEEEEEe
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY-SSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~-s~~In~i~~np~~~llasGs 120 (358)
+.++..+.++.++|||++++++ ...|.+||+.+...+..... ..+. ...++.++++|++.++++..
T Consensus 86 ~~~~~~v~~i~~~~dg~l~v~~---~~gl~~~d~~~g~~~~~~~~----------~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 86 HALPFMGSALAKISDSKQLIAS---DDGLFLRDTATGVLTLHAEL----------ESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp EECSSCEEEEEEEETTEEEEEE---TTEEEEEETTTCCEEEEECS----------STTCTTEEEEEEEECTTSCEEEEEE
T ss_pred EECCCcceEEEEeCCCeEEEEE---CCCEEEEECCCCcEEEEeeC----------CCCCCCCCCCCEEECCCCCEEEEeC
Confidence 4567789999999999977654 34599999876543211110 0000 03589999999999877654
Q ss_pred C------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECC--C
Q psy2085 121 I------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKE--I 188 (358)
Q Consensus 121 ~------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~--t 188 (358)
. .+.|..+| +++.. .+....... +.+.|+|+++.|+.+ + .|.+||.. +
T Consensus 153 ~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~-----------------~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~ 212 (326)
T 2ghs_A 153 GRKAETGAGSIYHVA--KGKVT-KLFADISIP-----------------NSICFSPDGTTGYFVDTKVNRLMRVPLDART 212 (326)
T ss_dssp ETTCCTTCEEEEEEE--TTEEE-EEEEEESSE-----------------EEEEECTTSCEEEEEETTTCEEEEEEBCTTT
T ss_pred CCcCCCCceEEEEEe--CCcEE-EeeCCCccc-----------------CCeEEcCCCCEEEEEECCCCEEEEEEccccc
Confidence 2 24555556 44432 222111111 679999999877543 3 89999986 6
Q ss_pred C
Q psy2085 189 K 189 (358)
Q Consensus 189 G 189 (358)
|
T Consensus 213 G 213 (326)
T 2ghs_A 213 G 213 (326)
T ss_dssp C
T ss_pred C
Confidence 6
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0028 Score=59.53 Aligned_cols=104 Identities=12% Similarity=0.034 Sum_probs=73.0
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcC--CC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETD--NL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~--~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
..+.++|+|||++|..+.+..+.|.+||+. +. .+...+ .+..+.. .......+++.+++.++++...++
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~-------~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAE-------VFIDSTG-IKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCE-------EEEECTT-SSSEEEEEEECTTSCEEEEEETTT
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCce-------EEEECCC-CCCCCCeeEECCCCCEEEEEeCCC
Confidence 468899999999887777777899999986 32 221000 0111111 113467899999999888877788
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
.|.+||+ +++.+..+..+...+ .+++|+ ++++.|+
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~-----------------~~~af~g~d~~~L~ 287 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQT-----------------TCPAFIGPDASRLL 287 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBE-----------------EEEEEESTTSCEEE
T ss_pred EEEEECC-CCCEEEEEECCCCCc-----------------EEEEEecCCCCEEE
Confidence 9999999 677777777654333 789998 8887664
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.0044 Score=55.44 Aligned_cols=113 Identities=10% Similarity=0.021 Sum_probs=76.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++|+|+..++ ....+.|.+||.. .... ... + +.....+.+|++.|++.++++...+|.|
T Consensus 15 ~~~~~i~~d~~g~l~v~-~~~~~~v~~~d~~-~~~~--~~~---------~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 80 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWIT-QHKANMISCINLD-GKIT--EYP---------L-PTPDAKVMCLTISSDGEVWFTENAANKI 80 (299)
T ss_dssp CCEEEEEECTTSCEEEE-ETTTTEEEEECTT-CCEE--EEE---------C-SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCccceEECCCCCEEEE-ecCCCcEEEEcCC-CCeE--Eec---------C-CcccCceeeEEECCCCCEEEeCCCCCeE
Confidence 46899999999986544 3346789999987 3221 110 0 1111568899999999999888878999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+. +. +..+..+... ..|..|.++++|...++. + .|.+||. +|+
T Consensus 81 ~~~~~~-g~-~~~~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 81 GRITKK-GI-IKEYTLPNPD---------------SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp EEECTT-SC-EEEEECSSTT---------------CCEEEEEECTTSCEEEEETTTTEEEEECT-TCC
T ss_pred EEECCC-Cc-EEEEeCCCcC---------------CCceeeEECCCCCEEEEecCCceEEEECC-CCC
Confidence 999986 33 3333322110 011789999999877763 4 8999998 665
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0036 Score=58.54 Aligned_cols=124 Identities=13% Similarity=0.063 Sum_probs=83.7
Q ss_pred ceeEEEEeeCCCC--EeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 35 RIELIQDFEMPGV--STSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 35 rIeliqdfe~~~~--v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
..++++.+.|+.. ...+.|+|||...+++|.+ ..+|+++|+.+.... +.. .+.+. ...-.+++..
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~--~~i--------~l~~~--~fgeGi~~~g 75 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVE--NIH--------KMDDS--YFGEGLTLLN 75 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEE--EEE--------ECCTT--CCEEEEEEET
T ss_pred CceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEE--EEE--------ecCCC--cceEEEEEeC
Confidence 4688999999865 5899999998544445533 579999999875432 111 11111 1223445542
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCC
Q psy2085 112 VHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEI 188 (358)
Q Consensus 112 ~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~t 188 (358)
+.+.++.-.+++|-++|+.+.+.++++... .+ ....+++||+.|+.+| .|.++|..+
T Consensus 76 -~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~------------------~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 76 -EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK------------------DGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp -TEEEEEETTCSEEEEEETTTTEEEEEEECC-SS------------------SCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred -CEEEEEEecCCEEEEEECCCCcEEEEEECC-CC------------------CeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 346666667899999999999999998754 22 2244566777777544 999999998
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
.+
T Consensus 136 ~~ 137 (266)
T 2iwa_A 136 FK 137 (266)
T ss_dssp CC
T ss_pred Cc
Confidence 77
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0011 Score=61.34 Aligned_cols=98 Identities=8% Similarity=0.012 Sum_probs=71.8
Q ss_pred EEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEE
Q psy2085 60 VLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTL 139 (358)
Q Consensus 60 LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L 139 (358)
++++|+.++.|.+||..+....+...... ...++++++.|++++|+ +.++.|.+||+ +++.+-.+
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~------------~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEK------------GWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCT------------TCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCc------------cCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 45778899999999987765443322110 02578999999999999 44788999999 89988888
Q ss_pred eCCCC-ccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c-ceEEEECCCCc
Q psy2085 140 DCAFN-CISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D-DDQAWTKEIKK 190 (358)
Q Consensus 140 ~~~~~-~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D-~IKIWD~~tG~ 190 (358)
..+.. .+ .++.+.++|+.|++ . + .|..+|. +|+
T Consensus 72 ~~~~~~~~-----------------~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk 109 (276)
T 3no2_A 72 AAPAGCEM-----------------QTARILPDGNALVAWCGHPSTILEVNM-KGE 109 (276)
T ss_dssp ECCTTCEE-----------------EEEEECTTSCEEEEEESTTEEEEEECT-TSC
T ss_pred cCCCCccc-----------------cccEECCCCCEEEEecCCCCEEEEEeC-CCC
Confidence 76421 22 67889999999886 3 4 6667776 576
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0028 Score=58.49 Aligned_cols=113 Identities=12% Similarity=0.040 Sum_probs=75.1
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
.++|.+.+ -........|+|||++|+.++...+.|..|+... .... + ..+. ..++.++++|++
T Consensus 35 ~~~~~l~~--~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~~~~----------~--~~~~--~~~~gl~~d~dG 97 (305)
T 3dr2_A 35 ARLLTLYD--QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-TVDV----------L--LDAT--AFTNGNAVDAQQ 97 (305)
T ss_dssp CCCEEEEC--CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-CEEE----------E--EESC--SCEEEEEECTTS
T ss_pred CceEEEec--CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-CEEE----------E--eCCC--CccceeeECCCC
Confidence 35665543 2234578999999998888888889999998742 2211 1 0111 468999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.++++...++.|.+||+. ++ +..+....... +...|+.|.++++|+..+|
T Consensus 98 ~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~------------~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 98 RLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGK------------RLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp CEEEEETTTTEEEEECTT-SC-EEEEECEETTE------------ECSCCCCEEECTTSCEEEE
T ss_pred CEEEEECCCCEEEEECCC-CC-EEEEEeccCCC------------ccCCCCCEEECCCCCEEEe
Confidence 988887777899999985 54 33332211110 0111277999999998885
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0012 Score=68.91 Aligned_cols=112 Identities=7% Similarity=-0.053 Sum_probs=74.0
Q ss_pred CCEeEEEEcCCCCEEEEE----EecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCC--eeEEEEcCCCCEEEEE
Q psy2085 46 GVSTSVRISPDGQYVLST----GIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSE--LNSIAINPVHQLICVG 119 (358)
Q Consensus 46 ~~v~~v~~SpDG~~Llat----G~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~--In~i~~np~~~llasG 119 (358)
..+..++|||||++|+-+ |+...+|+|||+.+....-. + + .. ...++|+ +++.|+.+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~---------~------~~~k~~~~~Ws-Dg~~l~y~ 191 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-P---------L------KDVKFSGISWL-GNEGFFYS 191 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-E---------E------EEEESCCCEEE-TTTEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-c---------c------CCceeccEEEe-CCCEEEEE
Confidence 368889999999998654 33335799999987542110 0 0 11 2467899 99988888
Q ss_pred eCCCe-------------EEEEeCCCCce--eEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEE-E-e---
Q psy2085 120 TIEGK-------------VEAWDPRMKVK--AGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEE-S-S--- 178 (358)
Q Consensus 120 s~DGt-------------V~iWD~Rs~~~--i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-S-a--- 178 (358)
+.++. |.+|++.++.. ........ +... . .++.|+|||++|+ + .
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~----~-----------~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 192 SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHR----Y-----------VGATVTEDDRFLLISAANST 256 (693)
T ss_dssp ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCS----E-----------EEEEECTTSCEEEEEEESSS
T ss_pred EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeE----E-----------EEEEEcCCCCEEEEEEccCC
Confidence 88754 99999887653 22222221 1100 0 5688999999875 3 2
Q ss_pred -c-ceEEEECCCC
Q psy2085 179 -D-DDQAWTKEIK 189 (358)
Q Consensus 179 -D-~IKIWD~~tG 189 (358)
+ .|.+||+.++
T Consensus 257 ~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 257 SGNRLYVKDLSQE 269 (693)
T ss_dssp SCCEEEEEETTST
T ss_pred CCcEEEEEECCCC
Confidence 2 7889998776
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0045 Score=55.38 Aligned_cols=113 Identities=10% Similarity=0.038 Sum_probs=77.3
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++|+|+.. ++....+.|.+||. +.... . +. + +.....++++++.|++.++++...++.|
T Consensus 99 ~~~~~i~~~~~g~l~-v~~~~~~~i~~~d~-~g~~~--~--------~~-~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 99 SAPYGITEGPNGDIW-FTEMNGNRIGRITD-DGKIR--E--------YE-L-PNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CCEEEEEECTTSCEE-EEETTTTEEEEECT-TCCEE--E--------EE-C-SSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CCceeeEECCCCCEE-EEecCCceEEEECC-CCCEE--E--------ec-C-CCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 468899999999754 45555788999998 33221 1 00 1 1111468999999999999888888999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+ +++... +...... ..|..|.++++|...++. + .|.+||. +|+
T Consensus 165 ~~~~~-~g~~~~-~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 165 GRITE-SGDITE-FKIPTPA---------------SGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp EEECT-TCCEEE-EECSSTT---------------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred EEEcC-CCcEEE-eeCCCCC---------------CcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 99999 665433 2221110 011779999999877764 4 8999999 776
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0028 Score=61.38 Aligned_cols=112 Identities=6% Similarity=-0.127 Sum_probs=72.4
Q ss_pred EEEEcCCCCEEEEEEe---------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 50 SVRISPDGQYVLSTGI---------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~---------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+.+||||++|.++.. .++.|.+||+.++...-.-..... ..+ +.. ..-..++|+|+++.|.+++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~-~~~--~~g---~~p~~~~~spDG~~l~v~n 143 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA-PRF--DVG---PYSWMNANTPNNADLLFFQ 143 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc-ccc--ccC---CCccceEECCCCCEEEEEe
Confidence 8999999999988753 256799999986543211111000 000 000 1234789999999888776
Q ss_pred C--CCeEEEEeCCCCceeEE-EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE---Eec-ceEEEECCCCc
Q psy2085 121 I--EGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE---SSD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~--DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll---SaD-~IKIWD~~tG~ 190 (358)
. +++|.++| .+++.+.. +..+. .+.+.|++...+ +.| .+.+||. +|+
T Consensus 144 ~~~~~~v~viD-~t~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 144 FAAGPAVGLVV-QGGSSDDQLLSSPT---------------------CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred cCCCCeEEEEE-CCCCEEeEEcCCCc---------------------eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 4 58899999 99998887 65432 244455554332 256 8888888 776
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0031 Score=58.97 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=82.0
Q ss_pred cceeEEEEeeCCCCE--eEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGVS--TSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~v--~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
...++++.|.|.... ..+.|+ ||....++|.|. .+|+++|+.+....-... +.+.+ .--.|++.
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~----------l~~~~--FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE----------LGKRY--FGEGISDW 95 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE----------CCTTC--CEEEEEEE
T ss_pred cceEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe----------cCCcc--ceeEEEEe
Confidence 457899999998765 889999 776555666552 489999998764322111 11111 11223332
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
. +.+....-.++.+-++|+.+.+.++++...... ..+ ++++..|+.+| .|.++|..
T Consensus 96 g-~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG------------------~gl--t~dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 96 K-DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG------------------WGL--THNDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp T-TEEEEEESSSSEEEEEETTTCCEEEEEECSSCC------------------CCE--EECSSCEEECCSSSEEEEECTT
T ss_pred C-CEEEEEEeeCCEEEEEECccCcEEEEEECCCCc------------------eEE--ecCCCEEEEECCCCeEEEEcCC
Confidence 2 345555556899999999999999999865432 223 35677777655 79999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+++
T Consensus 155 T~~ 157 (262)
T 3nol_A 155 SLT 157 (262)
T ss_dssp TCS
T ss_pred CCe
Confidence 877
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0022 Score=59.23 Aligned_cols=115 Identities=8% Similarity=0.003 Sum_probs=73.8
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee-eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE----
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE-RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV---- 118 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~-r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas---- 118 (358)
....++.+.++|||+.+ ++....+.|.+||.. ...... ..... .. ...+|.+++.|++.+++|
T Consensus 84 ~~~~~~gl~~d~dG~l~-v~~~~~~~v~~~~~~-g~~~~~~~~~~~--~~--------~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLV-HCEHGRRAITRSDAD-GQAHLLVGRYAG--KR--------LNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp SCSCEEEEEECTTSCEE-EEETTTTEEEEECTT-SCEEEEECEETT--EE--------CSCCCCEEECTTSCEEEECCSG
T ss_pred CCCccceeeECCCCCEE-EEECCCCEEEEECCC-CCEEEEEeccCC--Cc--------cCCCCCEEECCCCCEEEeCcCC
Confidence 34568999999999954 443345689999975 332111 00000 00 035789999999999987
Q ss_pred EeC-------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec------
Q psy2085 119 GTI-------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD------ 179 (358)
Q Consensus 119 Gs~-------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD------ 179 (358)
|+. .+.|..||+.+++..... .... |+.++|+|+++.|+.+|
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-----------------p~gl~~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-----------------PNGLAFSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-----------------EEEEEECTTSSEEEEEECCC---
T ss_pred CccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-----------------CcceEEcCCCCEEEEEecCCcCC
Confidence 442 367888998777643322 1111 17799999999777543
Q ss_pred ---ceEEEECCCC
Q psy2085 180 ---DDQAWTKEIK 189 (358)
Q Consensus 180 ---~IKIWD~~tG 189 (358)
.|.+||...+
T Consensus 213 ~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 213 GSVEITAFAWRDG 225 (305)
T ss_dssp CCCEEEEEEEETT
T ss_pred CCCEEEEEEecCC
Confidence 4888887654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0024 Score=62.55 Aligned_cols=114 Identities=15% Similarity=0.056 Sum_probs=75.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC--e
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG--K 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG--t 124 (358)
....|+|+|+|+ |+++...++.|++||+.+..+... +.. . .... ++|+|+++.|.++..++ .
T Consensus 132 ~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~------------~~~-~-~~~~-ia~~~~g~~l~~~d~~~~~~ 195 (409)
T 3hrp_A 132 YMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTV------------HPG-F-KGGK-PAVTKDKQRVYSIGWEGTHT 195 (409)
T ss_dssp CEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEE------------EET-C-CBCB-CEECTTSSEEEEEBSSTTCE
T ss_pred CceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEe------------ecc-C-CCCc-eeEecCCCcEEEEecCCCce
Confidence 467899999998 566666778999999986433211 111 1 2233 99999999888877766 8
Q ss_pred EEEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~tG~ 190 (358)
|.+||...+.....+. ..... ...|..++++|++..|+.+| .|..||..++.
T Consensus 196 I~~~d~~~~~~~~~~g~~~~~~--------------~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 196 VYVYMKASGWAPTRIGQLGSTF--------------SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp EEEEEGGGTTCEEEEEECCTTS--------------CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred EEEEEcCCCceeEEeeeccchh--------------cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 9999987765544441 00000 01127799999555555455 79999998776
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0022 Score=64.49 Aligned_cols=120 Identities=15% Similarity=0.103 Sum_probs=81.8
Q ss_pred EEEc--CCCCEEEEEEecCCeEEEEEcCCC--ceeeeeecc-CceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC---
Q psy2085 51 VRIS--PDGQYVLSTGIYKPRVRCYETDNL--SMKFERCFD-SEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE--- 122 (358)
Q Consensus 51 v~~S--pDG~~LlatG~~d~~IrvwDl~~l--slk~~r~~d-~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D--- 122 (358)
..++ +++++|+++|..+.+|.|+|+.+. ..+..+..+ .++.. ..++ ..-..+...|++ +++++..+
T Consensus 87 ~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~----~~g~-s~Ph~~~~~pdG-i~Vs~~g~~~g 160 (462)
T 2ece_A 87 PNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKK----VSGY-SRLHTVHCGPDA-IYISALGNEEG 160 (462)
T ss_dssp TTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHH----HHCE-EEEEEEEECSSC-EEEEEEEETTS
T ss_pred cccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhccc----ccCC-CcccceeECCCe-EEEEcCCCcCC
Confidence 3558 999999999999999999999743 233322221 00000 0000 122456677888 77666555
Q ss_pred ---CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---------------------
Q psy2085 123 ---GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--------------------- 178 (358)
Q Consensus 123 ---GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--------------------- 178 (358)
|.|-+.|..+++.++++.....+... +..+.|+|+++.++|+
T Consensus 161 ~~~g~v~vlD~~T~~v~~~~~~~~~~~~~--------------~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~ 226 (462)
T 2ece_A 161 EGPGGILMLDHYSFEPLGKWEIDRGDQYL--------------AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRY 226 (462)
T ss_dssp CSCCEEEEECTTTCCEEEECCSBCTTCCC--------------CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHS
T ss_pred CCCCeEEEEECCCCeEEEEEccCCCCccc--------------cceEEECCCCCEEEEccCcCccccccccchhhhhhcc
Confidence 89999999999999998744322110 0568899999999875
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ +|.+||..+++
T Consensus 227 ~d~V~v~D~~~~k 239 (462)
T 2ece_A 227 GNRIHFWDLRKRK 239 (462)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCEEEEEECCCCc
Confidence 5 99999999877
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0015 Score=68.34 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=25.6
Q ss_pred CCEeEEEEcCCCCEEEEEEec----CCeEEEEEcCCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIY----KPRVRCYETDNL 78 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~----d~~IrvwDl~~l 78 (358)
..+..+.|||||++|+.++.. ...|.+||+.+.
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 357899999999999776642 348999998654
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0021 Score=58.47 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=70.9
Q ss_pred CEeEEEEcCCCCEEEEEEec--------------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc--
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--------------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN-- 110 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--------------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n-- 110 (358)
.+++++++|+|+..+++... .+.|.+||.. ... .... ..+ ...+.++++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--~~~~-------~~~-----~~~~~i~~~~~ 182 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM--IQVD-------TAF-----QFPNGIAVRHM 182 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE--EEEE-------EEE-----SSEEEEEEEEC
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE--EEec-------cCC-----CCcceEEEecc
Confidence 47899999999866554322 1456666654 221 1110 001 356889999
Q ss_pred --CCCC-EEEEEeCCCeEEEEeCC-CCce-----eEEEeCCC-CccccccCCCccccccCCCceeeEEcCCCCEEEE--e
Q psy2085 111 --PVHQ-LICVGTIEGKVEAWDPR-MKVK-----AGTLDCAF-NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S 178 (358)
Q Consensus 111 --p~~~-llasGs~DGtV~iWD~R-s~~~-----i~~L~~~~-~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a 178 (358)
|+++ ++++.+.++.|.+||+. ++.. ...+..+. .. |..|.++++|...++ .
T Consensus 183 ~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~-----------------p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 183 NDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGG-----------------ADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp TTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCE-----------------EEEEEEBTTCCEEEEEET
T ss_pred cCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCC-----------------CCceEECCCCCEEEEEcC
Confidence 9985 56666778999999986 4432 11121111 11 167999999988776 3
Q ss_pred c-ceEEEECCCCc
Q psy2085 179 D-DDQAWTKEIKK 190 (358)
Q Consensus 179 D-~IKIWD~~tG~ 190 (358)
+ .|.+||..+|+
T Consensus 246 ~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 246 SSHIEVFGPDGGQ 258 (314)
T ss_dssp TTEEEEECTTCBS
T ss_pred CCEEEEEcCCCCc
Confidence 5 89999998776
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.30 E-value=3.7e-05 Score=74.34 Aligned_cols=138 Identities=9% Similarity=0.011 Sum_probs=63.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
...|.++.++.+..|+...++ ++..++. +.+.+..+.++|..+ ++++.++.|.+||..+......
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~-------------~~W~~~~-~~~~s~p~~~~g~~~-v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGS-------------IKWTLKE-DPVLQVPTHVEEPAF-LPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCC-------------EEEEEEC-CCSCCCC-----CCE-EECTTTCCEEEC-----CCSEE
T ss_pred CEEEEEcCCCEEEEEECCCCC-------------EEEEecC-CCceecceEcCCCEE-EEeCCCCEEEEEECCCCceeee
Confidence 467888999999999843332 2222333 334445566777644 4567899999999976543222
Q ss_pred eeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 84 RCFDSE-VVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 84 r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
...+.. .+ ....+ + ..+..+++|+.||.|.+||+++|+.+-.+..+.
T Consensus 75 ~~~~~~~~~--------~~sp~----~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------------- 122 (369)
T 2hz6_A 75 LPFTIPELV--------QASPC----R-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------------- 122 (369)
T ss_dssp CSCCHHHHH--------TTCSC----C------CCCCEEEEEEEEECCC-------------------------------
T ss_pred eeccCcccc--------ccCce----E-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-------------------
Confidence 111100 00 00111 1 134567788899999999999999877665432
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+.++|++..|++ .| .|..||..+|+
T Consensus 123 --~~~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 123 --ADSLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp ------------EEEEEEEEEEECCCSSSSS
T ss_pred --cccccccCCEEEEEecCCEEEEEECCCCC
Confidence 1334566666664 56 99999999998
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0047 Score=60.83 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=58.4
Q ss_pred EEEcCCCCEEEEEEec---------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCC----CCCeeEEEEcCCCCEEE
Q psy2085 51 VRISPDGQYVLSTGIY---------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY----SSELNSIAINPVHQLIC 117 (358)
Q Consensus 51 v~~SpDG~~LlatG~~---------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~----s~~In~i~~np~~~lla 117 (358)
+.+||||++|.++.++ ++.|.+||+.++...- . ..+...- ...-..++|+|+++.+.
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~--~--------I~v~~g~r~~~g~~P~~~a~spDGk~ly 152 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTA--D--------IELPDAPRFLVGTYPWMTSLTPDGKTLL 152 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE--E--------EEETTCCCCCBSCCGGGEEECTTSSEEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEE--E--------EECCCccccccCCCCceEEEcCCCCEEE
Confidence 9999999998877542 4679999998764321 1 1111100 01345789999999776
Q ss_pred EEeC--CCeEEEEeCCCCceeEEEeCC
Q psy2085 118 VGTI--EGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 118 sGs~--DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
.+.. +++|.++|+.+++.++++..+
T Consensus 153 Van~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 153 FYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 6653 789999999999999999754
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0083 Score=55.43 Aligned_cols=123 Identities=11% Similarity=0.003 Sum_probs=81.9
Q ss_pred cceeEEEEeeCCCC--EeEEEEcCCCCEEEEEEec-CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEc
Q psy2085 34 RRIELIQDFEMPGV--STSVRISPDGQYVLSTGIY-KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAIN 110 (358)
Q Consensus 34 ~rIeliqdfe~~~~--v~~v~~SpDG~~LlatG~~-d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~n 110 (358)
-..++++.|.|+.. ...+.|++ |....++|.| ..+|+++|+.+....-....+ +.+ .--.+++.
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~----------~~~--fgeGi~~~ 73 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP----------PPY--FGAGIVAW 73 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----------TTC--CEEEEEEE
T ss_pred cceEEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----------CCc--ceeEEEEe
Confidence 45789999999865 55899987 5555566655 358999999876443221111 110 11223333
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEEECC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAWTKE 187 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIWD~~ 187 (358)
. +.+....-.++.+-++|+.+.+.++++...... ..+.+++..|+.+| .|.++|..
T Consensus 74 ~-~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G--------------------wglt~dg~~L~vSdgs~~l~~iDp~ 132 (243)
T 3mbr_X 74 R-DRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG--------------------WALTSDDSHLYMSDGTAVIRKLDPD 132 (243)
T ss_dssp T-TEEEEEESSSSEEEEEETTTTEEEEEEECSSCC--------------------CEEEECSSCEEEECSSSEEEEECTT
T ss_pred C-CEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc--------------------eEEeeCCCEEEEECCCCeEEEEeCC
Confidence 2 446666667999999999999999999865432 23345666676555 99999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+.+
T Consensus 133 t~~ 135 (243)
T 3mbr_X 133 TLQ 135 (243)
T ss_dssp TCC
T ss_pred CCe
Confidence 877
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0056 Score=57.41 Aligned_cols=125 Identities=10% Similarity=-0.002 Sum_probs=84.4
Q ss_pred cccccceeEEEEeeCCCCE--eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEE
Q psy2085 30 NDIRRRIELIQDFEMPGVS--TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSI 107 (358)
Q Consensus 30 ~~~~~rIeliqdfe~~~~v--~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i 107 (358)
+-.++..++++.|.|+... ..+.|+. ..|..+.+..++|+++|+.+....-.. +.+.+ ..-.|
T Consensus 37 ~~~~~~~~Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-----------l~~~~--FgeGi 101 (268)
T 3nok_A 37 EPVRRVAHIIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-----------RLGNI--FAEGL 101 (268)
T ss_dssp CCEEEEEEEEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-----------ECTTC--CEEEE
T ss_pred CccccceEEEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-----------CCCCc--ceeEE
Confidence 4456677999999988655 6888873 455555556678999999876432221 22211 11224
Q ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEE
Q psy2085 108 AINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAW 184 (358)
Q Consensus 108 ~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIW 184 (358)
++.. +.+....-.++.+-++|+.+.+.++++...... ..|+ +++..|+.+| .|.++
T Consensus 102 t~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG------------------wGLt--~Dg~~L~vSdGs~~l~~i 160 (268)
T 3nok_A 102 ASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG------------------WGLC--YWNGKLVRSDGGTMLTFH 160 (268)
T ss_dssp EECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC------------------CCEE--EETTEEEEECSSSEEEEE
T ss_pred EEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce------------------eEEe--cCCCEEEEECCCCEEEEE
Confidence 4432 356666667999999999999999999864332 2344 5677777655 99999
Q ss_pred ECCCCc
Q psy2085 185 TKEIKK 190 (358)
Q Consensus 185 D~~tG~ 190 (358)
|..+++
T Consensus 161 Dp~T~~ 166 (268)
T 3nok_A 161 EPDGFA 166 (268)
T ss_dssp CTTTCC
T ss_pred cCCCCe
Confidence 999887
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0086 Score=57.95 Aligned_cols=79 Identities=9% Similarity=0.047 Sum_probs=59.8
Q ss_pred CeeEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCC
Q psy2085 103 ELNSIAINPVHQLICVGTI----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEE 172 (358)
Q Consensus 103 ~In~i~~np~~~llasGs~----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~ 172 (358)
+...++++|+++.+..+.. .+.|.+.|+.+++.+.++.....+ ..|.|+|||
T Consensus 268 g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p------------------~~i~~s~Dg 329 (373)
T 2mad_H 268 GWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV------------------DAISVAQDG 329 (373)
T ss_pred ceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCc------------------CeEEECCCC
Confidence 3556889999775554432 368999999999999999765444 779999999
Q ss_pred C-EEEEe---c-ceEEEECCCCcEE----ecCCCCC
Q psy2085 173 E-EEESS---D-DDQAWTKEIKKTY----NLGPAPK 199 (358)
Q Consensus 173 ~-~llSa---D-~IKIWD~~tG~~y----~lgpap~ 199 (358)
+ .++++ + .|-|||..+++.- .+|..|.
T Consensus 330 ~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~ 365 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQ 365 (373)
T ss_pred CeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCc
Confidence 9 66652 5 9999999999822 5677774
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0072 Score=62.65 Aligned_cols=112 Identities=12% Similarity=0.083 Sum_probs=72.5
Q ss_pred CCEeEEEE-c-CCCCEEEEEE-----------------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeE
Q psy2085 46 GVSTSVRI-S-PDGQYVLSTG-----------------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNS 106 (358)
Q Consensus 46 ~~v~~v~~-S-pDG~~LlatG-----------------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~ 106 (358)
.....+++ + |||+||++++ .|++.|.+.|..++...++-..+ +.-.-
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vg--------------g~pd~ 199 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVS--------------GNLDN 199 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEES--------------SCCCC
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeC--------------CCccc
Confidence 45778888 6 9999999886 45668999999865432221111 01123
Q ss_pred EEEcCCCCEEEEEeCCC--------------------------------------eEEEEeCCC--Cce-eEEEeCCCCc
Q psy2085 107 IAINPVHQLICVGTIEG--------------------------------------KVEAWDPRM--KVK-AGTLDCAFNC 145 (358)
Q Consensus 107 i~~np~~~llasGs~DG--------------------------------------tV~iWD~Rs--~~~-i~~L~~~~~~ 145 (358)
++++|++.++.+.+.+. .|.+-|+++ ++. ++.+..+.++
T Consensus 200 ~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~P 279 (595)
T 1fwx_A 200 CDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNP 279 (595)
T ss_dssp EEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSC
T ss_pred eEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCc
Confidence 55666666655555332 366666665 333 4455443333
Q ss_pred cccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCC
Q psy2085 146 ISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIK 189 (358)
Q Consensus 146 v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG 189 (358)
..+.|+|||++++.++ +|.++|..+.
T Consensus 280 ------------------hGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 280 ------------------HGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp ------------------CCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred ------------------eEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 7799999999998654 9999999864
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.004 Score=62.02 Aligned_cols=110 Identities=9% Similarity=-0.073 Sum_probs=75.4
Q ss_pred CCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe----------
Q psy2085 55 PDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT---------- 120 (358)
Q Consensus 55 pDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs---------- 120 (358)
||++++.++.... ++|.++|+.++... ..+ -... .. .++++|+++.|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv--~~I--------~vG~---~P--gia~SpDgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL--GMT--------DGGF---LP--HPVAAEDGSFFAQASTVFERIARGK 146 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEE--------EECS---SC--EEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE--EEE--------ECCC---CC--ceEECCCCCEEEEEeccccccccCC
Confidence 5888877775433 69999999876432 111 1111 23 799999998665554
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCC-ccccccCCCccccccCCCceeeEEcCCCCEEEE---e-c-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFN-CISNERDTEEKEGKASSDESSEEEEEEEEEEES---S-D-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~-~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---a-D-~IKIWD~~tG~ 190 (358)
.+++|.++|+.+++.++++..... .... ...|..+.|+|||++|+. . + .|-+.|..+++
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~-----------g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLV-----------GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCB-----------SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred CCCEEEEEECCCCcEEEEEECCCcccccc-----------CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCe
Confidence 478999999999999998874310 0000 011267999999998874 2 3 89999999988
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.045 Score=48.69 Aligned_cols=120 Identities=8% Similarity=0.026 Sum_probs=80.3
Q ss_pred EEEeeCC---CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 39 IQDFEMP---GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 39 iqdfe~~---~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
++.+..| ....++.++++|+.. ++...++.|.+||.. .... .. .+ +.....+.+|++.+++.+
T Consensus 10 ~~~~~~~~~~~~p~~i~~d~~g~l~-v~~~~~~~v~~~~~~-~~~~--~~---------~~-~~~~~~~~~i~~~~~g~l 75 (300)
T 2qc5_A 10 LEEFNLSIPDSGPYGITSSEDGKVW-FTQHKANKISSLDQS-GRIK--EF---------EV-PTPDAKVMCLIVSSLGDI 75 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEE-EEETTTTEEEEECTT-SCEE--EE---------EC-SSTTCCEEEEEECTTSCE
T ss_pred EEEEecCCCCCCcceeeECCCCCEE-EEcCCCCeEEEECCC-CceE--EE---------EC-CCCCCcceeEEECCCCCE
Confidence 4555544 367899999999855 444457899999977 3221 10 01 111146889999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
+++...++.|..||+. ++. ..+..+... ..|..|.++++|...++. + .|..||.. |+
T Consensus 76 ~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~---------------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 76 WFTENGANKIGKLSKK-GGF-TEYPLPQPD---------------SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp EEEETTTTEEEEECTT-SCE-EEEECSSTT---------------CCEEEEEECSTTCEEEEETTTTEEEEECTT-SC
T ss_pred EEEecCCCeEEEECCC-CCe-EEecCCCCC---------------CCCccceECCCCCEEEEccCCCeEEEECCC-CC
Confidence 8887778999999987 543 333322110 011789999999877763 4 88889887 65
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.076 Score=47.20 Aligned_cols=113 Identities=9% Similarity=-0.067 Sum_probs=75.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.++++|...+ +....+.|.+||.. .... . + .+ +.....++++++.|++.++++...++.|
T Consensus 62 ~~~~~i~~~~~g~l~v-~~~~~~~v~~~d~~-g~~~--~--------~-~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i 127 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWF-TENGANKIGKLSKK-GGFT--E--------Y-PL-PQPDSGPYGITEGLNGDIWFTQLNGDRI 127 (300)
T ss_dssp CCEEEEEECTTSCEEE-EETTTTEEEEECTT-SCEE--E--------E-EC-SSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred CcceeEEECCCCCEEE-EecCCCeEEEECCC-CCeE--E--------e-cC-CCCCCCCccceECCCCCEEEEccCCCeE
Confidence 5688999999998554 44446789999976 3221 1 0 01 1111468899999999999888878999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..||+. ++.. .+..+... ..|..|.++++|+..++. + .|.+||. +|+
T Consensus 128 ~~~~~~-g~~~-~~~~~~~~---------------~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 128 GKLTAD-GTIY-EYDLPNKG---------------SYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp EEECTT-SCEE-EEECSSTT---------------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred EEECCC-CCEE-EccCCCCC---------------CCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 999987 5443 23221110 012789999999866653 4 8889998 565
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0075 Score=56.84 Aligned_cols=111 Identities=8% Similarity=0.029 Sum_probs=66.9
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC---CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDN---LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~---lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
..++.|+|||||++|..+.....+|..++... ..+. .+..... +..+.. .+..+.+++.+++.++++...+
T Consensus 195 ~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~---~~~~g~--~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 195 LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLT-DAELGSK---IERYSE--KPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCC-HHHHHTT---CEEEEE--CCSCSCEEECTTCCEEEEEGGG
T ss_pred cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCC-hhhhhcc---eEeccc--CCCCceEEECCCCCEEEEccCC
Confidence 35799999999998877655444555555321 1110 0000000 011111 0345779999999999999999
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
+.|.+||+.+++.......+ .. ..|..|+|.+++.+++++
T Consensus 269 ~~V~~~d~~~G~~~~~~~~~-~~---------------~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 269 SAIGVITSADRAYKLLVTDE-KL---------------SWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TEEEEEETTTTEEEEEEECG-GG---------------SCEEEEEECTTSCEEEEE
T ss_pred CeEEEEECCCCCEEEEEECC-ce---------------ecCCeeEECCCCcEEEEe
Confidence 99999999666532222221 00 112789999998877763
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0029 Score=61.68 Aligned_cols=116 Identities=5% Similarity=-0.232 Sum_probs=73.9
Q ss_pred EeEEEEcC-CCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe--
Q psy2085 48 STSVRISP-DGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-- 120 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-- 120 (358)
+.|..+.| +...+.++....+ +|.++|+.++... ..+ .. .+ .+ .+.++|++..+..+.
T Consensus 21 ~~~~~~~~~~~~~~yV~~~~~~~~~d~vsvID~~t~~v~--~~i--------~v--G~-~P--~i~~spDg~~lyVan~~ 85 (368)
T 1mda_H 21 SSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTL--GHS--------LG--AF-LS--LAVAGHSGSDFALASTS 85 (368)
T ss_dssp CCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEE--------EE--CT-TC--EEEECTTSSCEEEEEEE
T ss_pred cccccCCCCCCCeEEEECCccCCccceEEEEECCCCeEE--EEE--------eC--CC-CC--ceEECCCCCEEEEEccc
Confidence 34444443 4456666655444 7889998875432 111 11 11 23 799999998776665
Q ss_pred --------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c--ceEE--EE
Q psy2085 121 --------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D--DDQA--WT 185 (358)
Q Consensus 121 --------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D--~IKI--WD 185 (358)
.+++|.+||+.+++.++++..+...- +. ....|..+.|+|||++|+.+ + .|.+ ||
T Consensus 86 ~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~---~~-------~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD 155 (368)
T 1mda_H 86 FARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR---FS-------VGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155 (368)
T ss_dssp ETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS---CC-------BSCCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred ccccccCCCCCEEEEEECCCCCEEEEEECCCccc---cc-------cCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEc
Confidence 37899999999999999997541100 00 00112679999999988742 3 6777 99
Q ss_pred CCC
Q psy2085 186 KEI 188 (358)
Q Consensus 186 ~~t 188 (358)
..+
T Consensus 156 ~~t 158 (368)
T 1mda_H 156 ASD 158 (368)
T ss_dssp TEE
T ss_pred hhh
Confidence 865
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.018 Score=56.28 Aligned_cols=132 Identities=7% Similarity=-0.114 Sum_probs=76.8
Q ss_pred EEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-cCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEE
Q psy2085 50 SVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-DSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEA 127 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~i 127 (358)
.++|+|++.+|.++....++|++|+.......+..+. .....+-....... ...+.|+++|++.++++-+ .++.|+.
T Consensus 271 ~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~-~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALF-AQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBC-SSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred cEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEe-CCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 9999997667777777788999999764311111110 00000000000000 3478999999999999988 8999999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE-e-c-ceEEEEC
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES-S-D-DDQAWTK 186 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~ 186 (358)
||+.++. +.++.++...- .+ .+|.. ..+-..|..|+++++|..+++ . . .|+.+++
T Consensus 350 ~~~~~G~-v~~~~g~~~~~--g~-~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILDGY-VSTVAGQVDVA--SQ-IDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTTTE-EEEEEECTTCB--SC-CCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EECCCCE-EEEEeCCCCCC--Cc-CCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 9987775 44444331100 00 01100 002344689999999765555 2 2 6766554
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.00072 Score=65.18 Aligned_cols=103 Identities=5% Similarity=-0.078 Sum_probs=53.9
Q ss_pred CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Q psy2085 56 DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVK 135 (358)
Q Consensus 56 DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~ 135 (358)
+|..| .+|+.++.|.+||..+....+.... +.+.+..+.+++.++++++.||.|.+||+.+++.
T Consensus 8 ~~~~v-~~gs~dg~v~a~d~~tG~~~W~~~~---------------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLL-FVSTLDGSLHAVSKRTGSIKWTLKE---------------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEE-EEEETTSEEEEEETTTCCEEEEEEC---------------CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred eCCEE-EEEcCCCEEEEEECCCCCEEEEecC---------------CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 45555 4567899999999988766554332 1233334446677888889999999999999987
Q ss_pred eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE--Eec-ceEEEECCCCc
Q psy2085 136 AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE--SSD-DDQAWTKEIKK 190 (358)
Q Consensus 136 i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll--SaD-~IKIWD~~tG~ 190 (358)
+-.+..+...... .+..+..+ ..|+ +.| .|..||..+|+
T Consensus 72 ~w~~~~~~~~~~~---------------~sp~~~~~-~~v~~g~~dg~v~a~D~~tG~ 113 (369)
T 2hz6_A 72 LTKLPFTIPELVQ---------------ASPCRSSD-GILYMGKKQDIWYVIDLLTGE 113 (369)
T ss_dssp SEECSCCHHHHHT---------------TCSCC------CCCCEEEEEEEEECCC---
T ss_pred eeeeeccCccccc---------------cCceEecC-CEEEEEeCCCEEEEEECCCCc
Confidence 7666533211000 00111122 3344 357 89999999887
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0045 Score=60.37 Aligned_cols=82 Identities=4% Similarity=-0.072 Sum_probs=59.9
Q ss_pred EEEEcCCCCEEEEEEe-c-------CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe
Q psy2085 50 SVRISPDGQYVLSTGI-Y-------KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT 120 (358)
Q Consensus 50 ~v~~SpDG~~LlatG~-~-------d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs 120 (358)
.+.|+|||++++++.. . .+.+.|+|+.++... +.+. . . .....|+|+|++. ++++..
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv--~~i~-----v---g----~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS--GPIS-----N---G----HDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE--ECCE-----E---E----EEECEEEECCSSSCEEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE--EEEE-----C---C----CCcceEEECCCCCEEEEEcc
Confidence 3789999999887643 2 235679999875431 1110 0 0 2367899999987 677767
Q ss_pred -CCCeEEEEeCCCCceeEEEeCCCCc
Q psy2085 121 -IEGKVEAWDPRMKVKAGTLDCAFNC 145 (358)
Q Consensus 121 -~DGtV~iWD~Rs~~~i~~L~~~~~~ 145 (358)
.+++|.++|+.+++.+.++..+..+
T Consensus 334 ~~~~~VsVID~~t~kvv~~I~vg~~P 359 (368)
T 1mda_H 334 AGTEVLDIYDAASDQDQSSVELDKGP 359 (368)
T ss_dssp TTTTEEEEEESSSCEEEEECCCCSCC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCCC
Confidence 5999999999999999999876554
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.67 E-value=0.012 Score=61.65 Aligned_cols=122 Identities=13% Similarity=0.084 Sum_probs=76.4
Q ss_pred EEEcCCCC--EEEEEEecCCeEEEEEcCCCceeeeeeccCce-EE---------E----------EEeecCCCCC--eeE
Q psy2085 51 VRISPDGQ--YVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VT---------F----------EILSDDYSSE--LNS 106 (358)
Q Consensus 51 v~~SpDG~--~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~---------f----------~~LS~D~s~~--In~ 106 (358)
+....||+ .++..++.++.|.++|..+..+.......... .. + ....|...+. -..
T Consensus 318 ~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~ 397 (677)
T 1kb0_A 318 ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHP 397 (677)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSC
T ss_pred EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCC
Confidence 34445884 34567888999999999887665433221100 00 0 0111111111 136
Q ss_pred EEEcCCCCEEEEEeC-------------------------------------------CCeEEEEeCCCCceeEEEeCCC
Q psy2085 107 IAINPVHQLICVGTI-------------------------------------------EGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 107 i~~np~~~llasGs~-------------------------------------------DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
++++|+.+++.+++. .|+|..||+.+++.+-.+....
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 477 (677)
T 1kb0_A 398 MSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS 477 (677)
T ss_dssp CEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS
T ss_pred ceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC
Confidence 789999888877643 2889999999999887665432
Q ss_pred CccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 144 NCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 144 ~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.. ....+...+..|+. .| .+++||..+|+
T Consensus 478 ~~------------------~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 478 PW------------------NGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp SC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CC------------------cCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 21 23445566677764 56 99999999999
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.014 Score=61.59 Aligned_cols=112 Identities=11% Similarity=-0.042 Sum_probs=70.3
Q ss_pred CEeEEEEc-CCCCEEEEEEecC----CeEEEEEcCCC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 47 VSTSVRIS-PDGQYVLSTGIYK----PRVRCYETDNL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 47 ~v~~v~~S-pDG~~LlatG~~d----~~IrvwDl~~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
.+...+|| |||++|+-+.+.. .+|+++|+.+. ... . ..+. .....++|+|+++.|+...
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l----~--~~~~---------~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI----A--DKVS---------GTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC----C--CCEE---------EECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC----C--cccc---------CceeeEEEecCCCEEEEEE
Confidence 57789999 9999887554333 35999999865 311 0 0111 1134678999998777766
Q ss_pred CC-----CeEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE-Ee----c-ceEEEECC
Q psy2085 121 IE-----GKVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE-SS----D-DDQAWTKE 187 (358)
Q Consensus 121 ~D-----GtV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll-Sa----D-~IKIWD~~ 187 (358)
.| ..|.+|++.++... ..+........ .++.|+|||++|+ ++ . .|.++|+.
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~----------------~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFS----------------AFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCE----------------EEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceE----------------EEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 55 25778888776432 22222111100 4678999999877 22 2 77888887
Q ss_pred CC
Q psy2085 188 IK 189 (358)
Q Consensus 188 tG 189 (358)
++
T Consensus 304 ~~ 305 (751)
T 2xe4_A 304 KG 305 (751)
T ss_dssp SC
T ss_pred CC
Confidence 65
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.015 Score=57.97 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=58.7
Q ss_pred eeEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 104 LNSIAINPVHQLICVGTI----------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 104 In~i~~np~~~llasGs~----------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
...++++|+++.+..... +++|.+.|+.+++.+.++.....+ ..|.|+|||+
T Consensus 321 ~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P------------------~gia~spDg~ 382 (426)
T 3c75_H 321 WQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEI------------------DSINVSQDAE 382 (426)
T ss_dssp SSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEE------------------CEEEECCSSS
T ss_pred ceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCc------------------CeEEEccCCC
Confidence 345789999774443321 358999999999999999865444 7799999999
Q ss_pred -EEEEe---c-ceEEEECCCCc---EE-ecCCCCC
Q psy2085 174 -EEESS---D-DDQAWTKEIKK---TY-NLGPAPK 199 (358)
Q Consensus 174 -~llSa---D-~IKIWD~~tG~---~y-~lgpap~ 199 (358)
+++++ + .|-|+|..+++ +. .+|..|.
T Consensus 383 ~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 383 PLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp CEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCc
Confidence 77762 5 99999999998 33 4666664
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.039 Score=51.47 Aligned_cols=121 Identities=7% Similarity=-0.033 Sum_probs=76.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCC--CCCeeEEEEcCCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDY--SSELNSIAINPVHQ 114 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~--s~~In~i~~np~~~ 114 (358)
+++..|.++ .-....+++||+.|+++- ..++|.++|..++... +... ...+. -..+|.+.|. ++.
T Consensus 97 ~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~--~~I~--------Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 97 SNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLI--KKHN--------VKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEE--EEEE--------CEETTEECCCEEEEEEE-TTE
T ss_pred cEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEE--EEEE--------ECCCCcccccceeEEEE-CCE
Confidence 556666654 112355888999888775 5789999999875421 1111 00000 0347888888 677
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCC-cc--ccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFN-CI--SNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~v--~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
+.+....++.|.+-|+.+++.++.++...- +- .... . ....|+.|+|+|+++.++.
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~-~------~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGF-R------DIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTC-T------TCCCEEEEEEETTTTEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccc-c------ccCceEEEEEcCCCCEEEE
Confidence 777776789999999999999999986310 00 0000 0 0011278999999987764
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.055 Score=56.23 Aligned_cols=114 Identities=10% Similarity=0.018 Sum_probs=69.9
Q ss_pred CCCEeEEEEcCCCCEEEEEEe---cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe
Q psy2085 45 PGVSTSVRISPDGQYVLSTGI---YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT 120 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~---~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs 120 (358)
+.....+.|||||++|+.+.. ....|.++|+.+....+.+ +.+.. ..+... +++++. ++++..
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-----------l~~~~-~~~~~~-~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-----------VQGDL-DADVSL-VDNKGSTLYLLTN 299 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE-----------EECSS-SSCEEE-EEEETTEEEEEEC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE-----------EeCCC-CceEEE-EeccCCEEEEEEC
Confidence 445778999999999976643 3358999998754221111 11111 222333 555555 444444
Q ss_pred CC---CeEEEEeCCCCce--eEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec---ceEEEECCCC
Q psy2085 121 IE---GKVEAWDPRMKVK--AGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD---DDQAWTKEIK 189 (358)
Q Consensus 121 ~D---GtV~iWD~Rs~~~--i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD---~IKIWD~~tG 189 (358)
.+ +.|..||+.++.+ ...|..+...+ +.|+++++.|+. .| .|++||...+
T Consensus 300 ~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-------------------~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~ 360 (693)
T 3iuj_A 300 RDAPNRRLVTVDAANPGPAHWRDLIPERQQV-------------------LTVHSGSGYLFAEYMVDATARVEQFDYEGK 360 (693)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEEECCCSSC-------------------EEEEEETTEEEEEEEETTEEEEEEECTTSC
T ss_pred CCCCCCEEEEEeCCCCCccccEEEecCCCCE-------------------EEEEEECCEEEEEEEECCeeEEEEEECCCC
Confidence 43 6899999987654 34554443321 389999988773 23 7899998755
Q ss_pred c
Q psy2085 190 K 190 (358)
Q Consensus 190 ~ 190 (358)
.
T Consensus 361 ~ 361 (693)
T 3iuj_A 361 R 361 (693)
T ss_dssp E
T ss_pred e
Confidence 4
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=96.39 E-value=0.027 Score=52.56 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=73.7
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-CCeeEEEEcCCCCE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS-SELNSIAINPVHQL 115 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s-~~In~i~~np~~~l 115 (358)
+++..|..++ ....+++||+.|+.|- ...+|.++|..++... +... | -..+.. ..+|-+.+. ++.+
T Consensus 118 ~~~~ti~~~~--eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~--~~I~---V----~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 118 RQVRSFNYDG--EGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPV--RTIT---V----TAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp CEEEEEECSS--CCCCEEECSSCEEECC-SSSEEEEECTTTCSEE--EEEE---C----EETTEECCCEEEEEEE-TTEE
T ss_pred cEEEEEECCC--CceEEecCCCEEEEEC-CCCeEEEEcCCCCeEE--EEEE---e----ccCCccccccceeEEE-CCEE
Confidence 5566666554 3345557888776654 3678999988765432 1111 0 000000 457778886 6777
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.|..-.+..|.+-|+++++.+++++...-.-....... ....|+.|+|+|+++.|+-
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~-----~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPS-----PIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCS-----SCCCEEEEEEETTTTEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccC-----cCCceEEEEEcCCCCEEEE
Confidence 77766788999999999999999986421000000000 0011288999999887764
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.016 Score=60.66 Aligned_cols=79 Identities=13% Similarity=0.155 Sum_probs=55.7
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~ 147 (358)
+.|..||+.+....+..... ..++...+...++++.+|+.||.|++||.++++.+-.+..+.....
T Consensus 455 g~l~A~D~~tG~~~W~~~~~--------------~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~ 520 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYV--------------TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMA 520 (689)
T ss_dssp EEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred eeEEEEECCCCCeEeEccCC--------------CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCccc
Confidence 67899999877665543322 1223335566788999999999999999999999988876543321
Q ss_pred cccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
.-+.|..+|++.+
T Consensus 521 ----------------~p~ty~~~G~qyv 533 (689)
T 1yiq_A 521 ----------------APVTYSVDGEQYV 533 (689)
T ss_dssp ----------------CCEEEEETTEEEE
T ss_pred ----------------CceEEEECCEEEE
Confidence 3367777776544
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.43 Score=42.55 Aligned_cols=130 Identities=9% Similarity=0.018 Sum_probs=73.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGtV 125 (358)
....++++|++.+|..+....++|.++++....... ++..+. ...+.|+++|++ .++++....+.|
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------~~~~~~-~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT------------IIRQDL-GSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE------------EECTTC-CCEEEEEEETTTTEEEEEETTTTEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE------------EEECCC-CCccEEEEEecCCeEEEEECCCCEE
Confidence 357899999988888887777899999987532110 111111 345777777754 455555566777
Q ss_pred EEEeCCCCceeEEE----eCCC--------Ccc-ccccC--CCcc-----ccc--------cCCCceeeEEcCCCCEEEE
Q psy2085 126 EAWDPRMKVKAGTL----DCAF--------NCI-SNERD--TEEK-----EGK--------ASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L----~~~~--------~~v-~~~~~--i~gl-----~Gt--------Rs~~P~sI~fs~d~~~llS 177 (358)
.++|+........+ ..+. ..+ ..... ...+ .|+ ....|..|+|++++..|+-
T Consensus 104 ~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv 183 (267)
T 1npe_A 104 EVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCW 183 (267)
T ss_dssp EEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEE
Confidence 77776532211000 1111 100 00000 0000 122 1134589999999888875
Q ss_pred ec----ceEEEECCCC
Q psy2085 178 SD----DDQAWTKEIK 189 (358)
Q Consensus 178 aD----~IKIWD~~tG 189 (358)
+| .|.++|...+
T Consensus 184 ~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 184 VDAGTHRAECLNPAQP 199 (267)
T ss_dssp EETTTTEEEEEETTEE
T ss_pred EECCCCEEEEEecCCC
Confidence 44 8889998754
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.03 Score=58.52 Aligned_cols=79 Identities=10% Similarity=0.098 Sum_probs=56.2
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccc
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~ 147 (358)
+.|..||+.+....+..... ..++...+...+.++.+|+.||.|.+||.++++.+..+..+.....
T Consensus 457 g~l~A~D~~tG~~~W~~~~~--------------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 522 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV--------------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVA 522 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cEEEEEeCCCCcEEeecCCC--------------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCccc
Confidence 67999999877655543322 1234445667788999999999999999999999999986543321
Q ss_pred cccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 148 NERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 148 ~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
.-+.|..+|+..+
T Consensus 523 ----------------~p~~y~~~G~~~v 535 (677)
T 1kb0_A 523 ----------------APSTYMVDGRQYV 535 (677)
T ss_dssp ----------------CCEEEEETTEEEE
T ss_pred ----------------CCEEEEeCCEEEE
Confidence 3367777776554
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.099 Score=48.90 Aligned_cols=122 Identities=8% Similarity=-0.033 Sum_probs=74.5
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecC-CCCCeeEEEEcCCCC
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDD-YSSELNSIAINPVHQ 114 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D-~s~~In~i~~np~~~ 114 (358)
.+++..|..++.- ..+++||+.|+.|- ..++|.++|..++... +.... -... --..+|-+.|. ++.
T Consensus 126 l~~~~ti~~~~eG--wGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~--~~I~V-------~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 126 PQRERTTRYSGEG--WGLCYWNGKLVRSD-GGTMLTFHEPDGFALV--GAVQV-------KLRGQPVELINELECA-NGV 192 (268)
T ss_dssp TEEEEEEECSSCC--CCEEEETTEEEEEC-SSSEEEEECTTTCCEE--EEEEC-------EETTEECCCEEEEEEE-TTE
T ss_pred CcEEEEEeCCCce--eEEecCCCEEEEEC-CCCEEEEEcCCCCeEE--EEEEe-------CCCCcccccccccEEe-CCE
Confidence 3566666655432 34457888887764 4789999998875432 21110 0000 00356888887 677
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCCCC-c-ccc-ccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCAFN-C-ISN-ERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~~~-~-v~~-~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++|..-.+..|.+-|+++++.+++++...- + ... ... ...-|+.|+|+|+++.|+-
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~-------~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTN-------PEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCC-------TTCCEEEEEECTTTCCEEE
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccC-------cCCceEEEEEcCCCCEEEE
Confidence 887766788999999999999999986410 0 000 000 0011288999998776663
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.12 Score=53.93 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=37.0
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|+|..||+.+++.+-.+..+... ..-.+...+.+|+. .| .+++||.+||+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~------------------~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIF------------------NGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeEccCCCCc------------------cCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 488999999999988776644322 22245556677764 57 99999999999
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.85 Score=41.75 Aligned_cols=87 Identities=13% Similarity=0.160 Sum_probs=58.9
Q ss_pred cceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC
Q psy2085 34 RRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH 113 (358)
Q Consensus 34 ~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~ 113 (358)
...+++..|.-+.....++|+|+|+ |+++....++|..||.... . ... +... ...+.|++.|++
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g~-lyv~d~~~~~I~~~d~~g~-~--~~~----------~~~~--~~p~gia~~~dG 83 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDGT-IFVTNHEVGEIVSITPDGN-Q--QIH----------ATVE--GKVSGLAFTSNG 83 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTCC-E--EEE----------EECS--SEEEEEEECTTS
T ss_pred CCceEeEeCCCCCCcceEEECCCCC-EEEEeCCCCeEEEECCCCc-e--EEE----------EeCC--CCceeEEEcCCC
Confidence 4467888886556678999999998 5555556789999987642 1 110 1111 357899999999
Q ss_pred CEEEEEeC-CC-eEEEEeCCCCcee
Q psy2085 114 QLICVGTI-EG-KVEAWDPRMKVKA 136 (358)
Q Consensus 114 ~llasGs~-DG-tV~iWD~Rs~~~i 136 (358)
+++++... ++ .|-.+|+.+++..
T Consensus 84 ~l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 84 DLVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEEECTTSCEE
T ss_pred cEEEEeccCCcceEEEEcCCCCeEE
Confidence 98777644 33 4666787777643
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.67 E-value=0.099 Score=52.54 Aligned_cols=147 Identities=11% Similarity=0.164 Sum_probs=82.5
Q ss_pred eEEEEeeCC---CCEeEEEE--cCCCCEEEEEEe-----cCCeEEEEEcCCCceeeeeeccCceEEEE-Eee---cCC--
Q psy2085 37 ELIQDFEMP---GVSTSVRI--SPDGQYVLSTGI-----YKPRVRCYETDNLSMKFERCFDSEVVTFE-ILS---DDY-- 100 (358)
Q Consensus 37 eliqdfe~~---~~v~~v~~--SpDG~~LlatG~-----~d~~IrvwDl~~lslk~~r~~d~e~v~f~-~LS---~D~-- 100 (358)
++++.+... .....|+| +|||+++.+++. -+++|-+|.......+.....+-....+. .+. .++
T Consensus 239 k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~ 318 (462)
T 2ece_A 239 KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKA 318 (462)
T ss_dssp EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTE
T ss_pred cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccccc
Confidence 566677664 23456666 999999998887 78899888776533222111110000000 000 000
Q ss_pred -CCCeeEEEEcCCCCEEEEEeC-CCeEEEEeCCC---CceeEEEeCCCCccccccCCCcccccc-CCCceeeEEcCCCCE
Q psy2085 101 -SSELNSIAINPVHQLICVGTI-EGKVEAWDPRM---KVKAGTLDCAFNCISNERDTEEKEGKA-SSDESSEEEEEEEEE 174 (358)
Q Consensus 101 -s~~In~i~~np~~~llasGs~-DGtV~iWD~Rs---~~~i~~L~~~~~~v~~~~~i~gl~GtR-s~~P~sI~fs~d~~~ 174 (358)
......|.+||+++.|-++.. .+.|.++|+.. .+.++.+...... . .++-..|.+ ...|..++++|||++
T Consensus 319 ~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~-~---~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 319 VPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIF-H---RADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp ECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTT-T---CBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred CCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCee-c---cccccccccCCCCCCEEEEcCCCCE
Confidence 034678999999987665554 78999999752 3455666543110 0 000000000 012478999999999
Q ss_pred EEEec-ceEEEECC
Q psy2085 175 EESSD-DDQAWTKE 187 (358)
Q Consensus 175 llSaD-~IKIWD~~ 187 (358)
|+.+. -..-||.+
T Consensus 395 LyVaNsl~~~wd~Q 408 (462)
T 2ece_A 395 VYVTNSLYSTWDNQ 408 (462)
T ss_dssp EEEECCCCHHHHHH
T ss_pred EEEEcCCccccccc
Confidence 98655 44455554
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=95.65 E-value=0.49 Score=43.43 Aligned_cols=44 Identities=14% Similarity=0.093 Sum_probs=31.4
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
++++....+.......++++|..|....-.++.+.+||..++.+
T Consensus 54 kv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 54 RILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp CEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred CEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 45566666766666666667777777666678999999987654
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=95.44 E-value=0.32 Score=44.81 Aligned_cols=113 Identities=10% Similarity=0.021 Sum_probs=68.4
Q ss_pred CEeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC---
Q psy2085 47 VSTSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI--- 121 (358)
Q Consensus 47 ~v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~--- 121 (358)
....+++.| +|+.+ ++. ....|.++|..+...+..... .....+ ...|.|++.| ++.+.++-..
T Consensus 81 ~p~gi~~~~~~g~l~-v~d-~~~~i~~~d~~~g~~~~~~~~-~~~~~~--------~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 81 RTYDISYNLQNNQLY-IVD-CYYHLSVVGSEGGHATQLATS-VDGVPF--------KWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp CEEEEEEETTTTEEE-EEE-TTTEEEEECTTCEECEEEESE-ETTEEC--------SCEEEEEECTTTCCEEEEESCSSC
T ss_pred CCceEEEcCCCCcEE-EEE-CCCCEEEEeCCCCEEEEeccc-CCCCcc--------cccceEEEecCCCEEEEECCcccc
Confidence 468899998 77644 432 234588888664322111000 000000 3478999999 8988777533
Q ss_pred --------------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEE
Q psy2085 122 --------------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQA 183 (358)
Q Consensus 122 --------------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKI 183 (358)
+|.|..||+.+++.......-..+ +.|+|+|+|+.|+-+| .|.+
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p------------------~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP------------------GGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC------------------CEEEECTTSSEEEEEEGGGTEEEE
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEeccCCccC------------------cceEECCCCCEEEEEeCCCCeEEE
Confidence 478999998777643222211111 6799999998766433 7888
Q ss_pred EECCC
Q psy2085 184 WTKEI 188 (358)
Q Consensus 184 WD~~t 188 (358)
+|..+
T Consensus 212 ~~~~~ 216 (322)
T 2fp8_A 212 YWLEG 216 (322)
T ss_dssp EESSS
T ss_pred EECCC
Confidence 88875
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.09 E-value=0.38 Score=47.19 Aligned_cols=112 Identities=8% Similarity=-0.074 Sum_probs=68.6
Q ss_pred CEeEEEEcCCCCEEEEEEecCC----eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKP----RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTI 121 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~----~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~ 121 (358)
....|+|+++|++|+++....+ .+.+++... .....+ .+..+ ...+.++++| ++.++++-..
T Consensus 180 ~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~~-------~l~~~-----~~p~giavdp~~g~lyv~d~~ 246 (430)
T 3tc9_A 180 KVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVIT-------ELTKG-----QNCNGAETHPINGELYFNSWN 246 (430)
T ss_dssp CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSEE-------EEEEC-----SSCCCEEECTTTCCEEEEETT
T ss_pred CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeeee-------eeccC-----CCceEEEEeCCCCEEEEEECC
Confidence 4678999999998877754322 233333321 111000 01111 3467899999 7788888778
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~ 187 (358)
++.|..+|+..+........... ..|..|+|+|+|++|+-+| .|..+|.+
T Consensus 247 ~~~V~~~~~~~~~~~~~~~~~~~----------------~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 247 AGQVFRYDFTTQETTPLFTIQDS----------------GWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTEEEEEETTTTEEEEEEECSSS----------------SCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEEcCCC----------------CcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 89999999987654222221111 1127899999999666433 77777654
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=94.97 E-value=0.78 Score=40.80 Aligned_cols=111 Identities=14% Similarity=0.112 Sum_probs=70.9
Q ss_pred CEeEEEEcCCCCEEEEEEec--CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCC
Q psy2085 47 VSTSVRISPDGQYVLSTGIY--KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEG 123 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~--d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DG 123 (358)
..+.++++|++.+|..+... .++|.++++.....+. +...+. ...+.++++|+++ ++++-...+
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~------------~~~~~~-~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI------------LAQDNL-GLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEE------------EECTTC-SCEEEEEEETTTTEEEEEETTTT
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEE------------EEECCC-CCCcEEEEcCCCCEEEEEECCCC
Confidence 45899999987777666543 4688888876422110 011111 3568999999765 666667789
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
.|.++|+........+.....+ ..|+.. +..|+-+| .|.++|..+|+
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P------------------~gi~~d--~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYP------------------FAVTSY--GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSE------------------EEEEEE--TTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEecCCCceEEEecCCCCc------------------eEEEEe--CCEEEEEECCCCeEEEEeCCCCC
Confidence 9999999765444444322222 456654 45555433 89999999887
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=94.87 E-value=0.57 Score=43.08 Aligned_cols=113 Identities=9% Similarity=0.002 Sum_probs=70.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC------
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI------ 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~------ 121 (358)
.+.|+++|||++|.++-+..++|.+|++...... ....+.-+ + + .+.|++.+++.+.++...
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~-------~~~~~~~~-~---g-P~gi~~d~~G~l~va~~~~~~~~~ 254 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKG-------TAEVLVKI-P---N-PGNIKRNADGHFWVSSSEELDGNM 254 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTT-------CEEEEEEC-S---S-EEEEEECTTSCEEEEEEEETTSST
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCC-------ccceEEeC-C---C-CCCeEECCCCCEEEEecCcccccc
Confidence 3679999999988777666789999998752110 00001111 1 2 677899999998777654
Q ss_pred ----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 122 ----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 122 ----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
.+.|..+|+ .++.+..+..+.... + ..|..+.+. ++.+.++ .. .|.++++.
T Consensus 255 ~~~~~~~v~~~d~-~G~~~~~~~~~~g~~---~----------~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 255 HGRVDPKGIKFDE-FGNILEVIPLPPPFA---G----------EHFEQIQEH-DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TSCEEEEEEEECT-TSCEEEEEECCTTTT---T----------SCCCEEEEE-TTEEEEECSSCSEEEEEEC-
T ss_pred cCCCccEEEEECC-CCCEEEEEECCCCCc---c----------ccceEEEEe-CCEEEEeecCCCceEEEecc
Confidence 578999998 477777776542210 0 001556663 5555555 23 77788875
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=94.63 E-value=0.41 Score=48.86 Aligned_cols=121 Identities=14% Similarity=-0.015 Sum_probs=71.3
Q ss_pred EEcCCCC--EEEEEEecCCeEEEEEcCCCceeeeeeccCce-------------E-----------EEEEeecCCCCC--
Q psy2085 52 RISPDGQ--YVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-------------V-----------TFEILSDDYSSE-- 103 (358)
Q Consensus 52 ~~SpDG~--~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-------------v-----------~f~~LS~D~s~~-- 103 (358)
...+||+ .++..++.++.+.++|..+..+.........+ + .-....|...++
T Consensus 308 ~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~ 387 (571)
T 2ad6_A 308 DQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN 387 (571)
T ss_dssp EEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC
T ss_pred ecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccC
Confidence 3345786 45566788899999999887665443322100 0 001111211111
Q ss_pred eeEEEEcCCCCEEEEEe-------------------------------------CCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 104 LNSIAINPVHQLICVGT-------------------------------------IEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 104 In~i~~np~~~llasGs-------------------------------------~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
-..++++|+.++|..++ .+|.|.+||+.+++.+-++......
T Consensus 388 w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~- 466 (571)
T 2ad6_A 388 QGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAA- 466 (571)
T ss_dssp SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCC-
T ss_pred CCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCc-
Confidence 14578888877766553 3588999999999887666533221
Q ss_pred ccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 147 SNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 147 ~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
........+..|+. .| .|.+||.++|+
T Consensus 467 -----------------~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 467 -----------------WGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp -----------------CSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred -----------------cceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 11112223445553 56 99999999999
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=93.94 E-value=0.66 Score=47.49 Aligned_cols=64 Identities=14% Similarity=0.122 Sum_probs=43.2
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
.+.|..||+.+....++..... + +..-.+...++++.+|+.||.+++||.++++.+-.+..+..
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~---------~-----~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL---------P-----LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---------C-----CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred cceEEEEECCCCCEEEEecCCC---------C-----CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 4678888888766555432211 1 11111222467888899999999999999999988876543
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=93.81 E-value=0.13 Score=53.19 Aligned_cols=106 Identities=17% Similarity=0.197 Sum_probs=70.3
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-cCc-eEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-DSE-VVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-d~e-~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
++....-|..-..|.++|||+|++++|--+|+|.|+|+..+.--|...+ +.+ ++-..+ ..+ -+-...+|.+++..
T Consensus 315 ~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~G--lGPlHt~Fd~~G~a 391 (638)
T 3sbq_A 315 FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELG--LGPLHTTFDGRGNA 391 (638)
T ss_dssp SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCC--SCEEEEEECSSSEE
T ss_pred eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCC--CcccEEEECCCCce
Confidence 4444455666778999999999999999999999999985311111111 100 000000 001 34577899999977
Q ss_pred EEEEeCCCeEEEEeCCCC----------ceeEEEeCCCCcc
Q psy2085 116 ICVGTIEGKVEAWDPRMK----------VKAGTLDCAFNCI 146 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~----------~~i~~L~~~~~~v 146 (358)
..|---|..|--|++... ..+..++.|.++.
T Consensus 392 YTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG 432 (638)
T 3sbq_A 392 YTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG 432 (638)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE
T ss_pred EeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCc
Confidence 777778999999998653 3567888887653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=93.74 E-value=0.29 Score=49.94 Aligned_cols=63 Identities=11% Similarity=0.103 Sum_probs=42.4
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
.+.|.+||+.+.......... ..+.+..+...++++..|+.||.|.+||.++++.+..+....
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--------------~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--------------FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--------------SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCeEEEEECCCCCEEEEecCC--------------CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCC
Confidence 357888888776555443221 112222233346777789999999999999999998887653
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=93.42 E-value=0.43 Score=43.82 Aligned_cols=98 Identities=10% Similarity=0.036 Sum_probs=64.1
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
.+.| +|||++|.++-+..++|.+||+.. ..+.. .+. +..+ .....+++.++++++++....+.|.
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~-----~~~--~~~~-----~~P~gi~vd~dG~l~va~~~~~~V~ 236 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE-----PEI--FVEQ-----TNIDDFAFDVEGNLYGATHIYNSVV 236 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC-----CEE--EEES-----CCCSSEEEBTTCCEEEECBTTCCEE
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc-----cEE--Eecc-----CCCCCeEECCCCCEEEEeCCCCeEE
Confidence 4555 899999888877888999999874 22110 011 1111 2345689999999988877789999
Q ss_pred EEeCCCCceeE--EEeCCCCccccccCCCccccccCCCceeeEEc---CCCCEEEE
Q psy2085 127 AWDPRMKVKAG--TLDCAFNCISNERDTEEKEGKASSDESSEEEE---EEEEEEES 177 (358)
Q Consensus 127 iWD~Rs~~~i~--~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs---~d~~~llS 177 (358)
++|+. ++... .+..+. ..|.+++|. |+++.|+-
T Consensus 237 ~~~~~-G~~~~~~~~~~~~-----------------~~p~~~a~~g~~~d~~~LyV 274 (306)
T 2p4o_A 237 RIAPD-RSTTIIAQAEQGV-----------------IGSTAVAFGQTEGDCTAIYV 274 (306)
T ss_dssp EECTT-CCEEEEECGGGTC-----------------TTEEEEEECCSTTTTTEEEE
T ss_pred EECCC-CCEEEEeeccccc-----------------CCceEEEEecccCCCCEEEE
Confidence 99985 54422 222111 112789998 78777663
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=93.40 E-value=0.9 Score=46.47 Aligned_cols=51 Identities=14% Similarity=-0.008 Sum_probs=33.2
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+|.|..||+++++.+-.......... -.+. ..+.+|+. .| .++.||.+||+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~----------------g~~~--tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWA----------------GVLA--TAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCS----------------CCEE--ETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCCCCCcc----------------cceE--eCCCEEEEECCCCcEEEEECCCCC
Confidence 68999999999988755543221100 0111 12455553 57 99999999999
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=93.22 E-value=5 Score=37.15 Aligned_cols=105 Identities=15% Similarity=0.134 Sum_probs=61.5
Q ss_pred CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee
Q psy2085 57 GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 57 G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i 136 (358)
+..|++ ++.++.|.++|..+....+.......+. .+..+. +..+..++.+|.|..+|+++++.+
T Consensus 103 ~~~v~v-~~~~g~l~a~d~~tG~~~W~~~~~~~~~-------------~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 103 GGHVYI-GSEKAQVYALNTSDGTVAWQTKVAGEAL-------------SRPVVS--DGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp TTEEEE-EETTSEEEEEETTTCCEEEEEECSSCCC-------------SCCEEE--TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCEEEE-EcCCCEEEEEECCCCCEEEEEeCCCceE-------------cCCEEE--CCEEEEEcCCCeEEEEECCCCcEE
Confidence 334543 5678899999998877665544332210 011111 457778899999999999999988
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
-............. . ...... ++..++. .+ .|..+|..+|+
T Consensus 167 W~~~~~~~~~~~~~-~-----------~~~~~~-~~~v~~g~~~g~l~~~d~~tG~ 209 (376)
T 3q7m_A 167 WTVNLDMPSLSLRG-E-----------SAPTTA-FGAAVVGGDNGRVSAVLMEQGQ 209 (376)
T ss_dssp EEEECCC-----CC-C-----------CCCEEE-TTEEEECCTTTEEEEEETTTCC
T ss_pred EEEeCCCCceeecC-C-----------CCcEEE-CCEEEEEcCCCEEEEEECCCCc
Confidence 76664322110000 0 111222 3333333 45 88999999888
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.81 E-value=0.3 Score=50.80 Aligned_cols=63 Identities=10% Similarity=0.168 Sum_probs=45.6
Q ss_pred CCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 67 KPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 67 d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
++.|..||+.+....+..... ..+....+...++++.+|+.||.|++||.++++.+..+..+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~--------------~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYP--------------THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEES--------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEeCCCCcEEEEccCC--------------CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 367899998877665543321 122333444567899999999999999999999998887653
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=92.14 E-value=6.7 Score=36.12 Aligned_cols=111 Identities=13% Similarity=0.003 Sum_probs=70.4
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.++|+.....+. ++..+. ...+.|++.|.++ ++.+.... +.|
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~------------~~~~~~-~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE------------EEECTT-CCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEE------------EEECCC-CCcceEEeCCCCCEEEEEccCCCCeE
Confidence 46889988777777776667899999987432110 111111 4568999999655 45554433 788
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+. ++....+-... + ..|+.|+|++++..|+-+| .|...|.+.
T Consensus 146 ~~~~~d-G~~~~~~~~~~--~--------------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 146 KKGGLN-GVDIYSLVTEN--I--------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEETT-SCCEEEEECSS--C--------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEcCC-CCCeEEEEECC--C--------------CCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 888874 33333332110 0 1127899999988888765 788888863
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=91.96 E-value=0.48 Score=45.79 Aligned_cols=88 Identities=18% Similarity=0.391 Sum_probs=59.4
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC-CceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN-LSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQL 115 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~-lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~l 115 (358)
++.++.+ .|.|+|||||++|.++-+..++|..||+.. ..+...+. |. + + +....+++.+ +|++
T Consensus 216 ~~~~l~~---pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~-------~~-~-~---g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 216 VAEGFDF---ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRV-------LS-F-D---TLVDNISVDPVTGDL 280 (355)
T ss_dssp EEEEESS---EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE-------EE-C-S---SEEEEEEECTTTCCE
T ss_pred eecCCcc---cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEE-------Ee-C-C---CCCceEEEeCCCCcE
Confidence 3445544 499999999999988888889999999963 22322111 11 1 1 4567889999 5998
Q ss_pred EEEEeCC-CeEEEEeCCC--CceeEEEe
Q psy2085 116 ICVGTIE-GKVEAWDPRM--KVKAGTLD 140 (358)
Q Consensus 116 lasGs~D-GtV~iWD~Rs--~~~i~~L~ 140 (358)
.+++..+ +.|..||+.. ++.+..+.
T Consensus 281 wva~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEEecCCceEEEEECCCCCCCCEEEEEE
Confidence 8877644 5677778863 45555555
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=91.27 E-value=2.4 Score=43.41 Aligned_cols=120 Identities=13% Similarity=0.135 Sum_probs=69.4
Q ss_pred CCCCEeEEEEcC-CCCEEEEEEecCC-----------eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC
Q psy2085 44 MPGVSTSVRISP-DGQYVLSTGIYKP-----------RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP 111 (358)
Q Consensus 44 ~~~~v~~v~~Sp-DG~~LlatG~~d~-----------~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np 111 (358)
+|.....+++.| +|+. ++.|++++ .+.+||+.+..-. ... .+.........++++.+
T Consensus 184 ~P~~~~~~av~~~~g~l-~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~--~~~--------~~~~~~~~~~~~~~~~~ 252 (656)
T 1k3i_A 184 LPIVPAAAAIEPTSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS--DRT--------VTVTKHDMFCPGISMDG 252 (656)
T ss_dssp CSSCCSEEEEETTTTEE-EEEEECCCTTTCSCCCSEEEEEEECTTTCCBC--CCE--------EEECSCCCSSCEEEECT
T ss_pred CCCCceeEEEEecCCEE-EEEecccccccccCCCCeEEEEEEeCCCCcEE--eCc--------ccCCCCCCccccccCCC
Confidence 343345778888 7764 45554432 5889998764321 100 01011112334577889
Q ss_pred CCCEEEEEeC-CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e--c------ce
Q psy2085 112 VHQLICVGTI-EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S--D------DD 181 (358)
Q Consensus 112 ~~~llasGs~-DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a--D------~I 181 (358)
++.++++||. ++.|++||+.+++-...-..+..- .. .++...++++.++. . + .+
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R--------------~~--~s~~~~~dg~iyv~GG~~~~~~~~~~~ 316 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR--------------GY--QSSATMSDGRVFTIGGSWSGGVFEKNG 316 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC--------------SS--CEEEECTTSCEEEECCCCCSSSCCCCE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECCCCCccc--------------cc--cceEEecCCeEEEEeCcccCCcccccc
Confidence 9999999994 568999999887543221111100 00 34566667776653 1 1 68
Q ss_pred EEEECCCCc
Q psy2085 182 QAWTKEIKK 190 (358)
Q Consensus 182 KIWD~~tG~ 190 (358)
.+||..+++
T Consensus 317 e~yd~~t~~ 325 (656)
T 1k3i_A 317 EVYSPSSKT 325 (656)
T ss_dssp EEEETTTTE
T ss_pred eEeCCCCCc
Confidence 899998775
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=91.27 E-value=1.2 Score=46.20 Aligned_cols=52 Identities=13% Similarity=0.168 Sum_probs=35.9
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCcE
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKKT 191 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~~ 191 (358)
+|.|..||+++++.+-....+... ....+...+.+|+. .| .+++||.++|+.
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~------------------~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHW------------------NGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEeCCCCcEEEEccCCCCC------------------cCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 489999999999987666533221 12233445666664 46 999999999993
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=91.25 E-value=2 Score=41.34 Aligned_cols=110 Identities=9% Similarity=0.081 Sum_probs=64.8
Q ss_pred EeEEEEcC--CCC-EEEEEEec--CCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 48 STSVRISP--DGQ-YVLSTGIY--KPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 48 v~~v~~Sp--DG~-~LlatG~~--d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
-..+.+.+ ||+ +|+++-.. ..+|.||++...+ +......+. +- -...|.+.+.+++.+.++..
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g---------~~-~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH---------KL-LPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC---------TT-CSSEEEEEEEETTEEEEEES
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecccc---------CC-CCCCceEEEeCCCCEEecCC
Confidence 45566555 565 56666333 4678898876432 111111111 11 15689999999998888764
Q ss_pred -----------------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----
Q psy2085 121 -----------------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---- 179 (358)
Q Consensus 121 -----------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---- 179 (358)
..|.|-.+|+. + +..+..... .|+.|+|+||++.|+-+|
T Consensus 184 ~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~-----------------~pNGia~spDg~~lYvadt~~~ 243 (355)
T 3sre_A 184 HYFIDPYLKSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFD-----------------FANGINISPDGKYVYIAELLAH 243 (355)
T ss_dssp CSCSSHHHHHHHHHTTCCCEEEEEECTT--C-CEEEEEEES-----------------SEEEEEECTTSSEEEEEEGGGT
T ss_pred cEeCCcccccchhhccCCccEEEEEECC--e-EEEeecCCc-----------------ccCcceECCCCCEEEEEeCCCC
Confidence 13566667763 2 222211110 128899999999888655
Q ss_pred ceEEEECC
Q psy2085 180 DDQAWTKE 187 (358)
Q Consensus 180 ~IKIWD~~ 187 (358)
.|..||..
T Consensus 244 ~I~~~~~~ 251 (355)
T 3sre_A 244 KIHVYEKH 251 (355)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEEC
Confidence 78888875
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=90.93 E-value=3.1 Score=38.62 Aligned_cols=96 Identities=13% Similarity=0.006 Sum_probs=59.6
Q ss_pred CEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Q psy2085 58 QYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAG 137 (358)
Q Consensus 58 ~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~ 137 (358)
..|+ .+++++.|.++|..+....+.... .....+.. .+..+..++.+|.|.++|+.+++.+-
T Consensus 240 ~~v~-~~~~~g~l~~~d~~tG~~~w~~~~---------------~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w 301 (376)
T 3q7m_A 240 GVVF-ALAYNGNLTALDLRSGQIMWKREL---------------GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLW 301 (376)
T ss_dssp TEEE-EECTTSCEEEEETTTCCEEEEECC---------------CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEE
T ss_pred CEEE-EEecCcEEEEEECCCCcEEeeccC---------------CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 3443 345788999999987655443322 12233333 35677777889999999999998876
Q ss_pred EEeCC-CCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 138 TLDCA-FNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 138 ~L~~~-~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..... .... .+.... +..|+. .+ .+.++|..+|+
T Consensus 302 ~~~~~~~~~~-----------------~~~~~~--~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 302 TQSDLLHRLL-----------------TSPVLY--NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EECTTTTSCC-----------------CCCEEE--TTEEEEECTTSEEEEEETTTCC
T ss_pred eecccCCCcc-----------------cCCEEE--CCEEEEEeCCCeEEEEECCCCc
Confidence 65521 1111 112222 234443 35 89999999998
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=90.90 E-value=5.8 Score=38.70 Aligned_cols=31 Identities=13% Similarity=0.005 Sum_probs=20.9
Q ss_pred EeEEEEcCC--CCEEEEEEecCCeEEEEEcCCCc
Q psy2085 48 STSVRISPD--GQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 48 v~~v~~SpD--G~~LlatG~~d~~IrvwDl~~ls 79 (358)
-..|+|+|+ +..|..+-.. +.|+.+|+.+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~ 173 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY 173 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCE
Confidence 368899995 3446555333 789999986543
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.82 E-value=9 Score=34.99 Aligned_cols=124 Identities=7% Similarity=0.026 Sum_probs=72.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC----ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeC
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNL----SMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTI 121 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l----slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~ 121 (358)
..-.++++|+++.|+++...+| ..||.+... .++..... . +........+.+|+++|. +.+++....
T Consensus 122 g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~--~-----~~~~~~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 122 GFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDK--A-----LQRQFTLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp CCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECH--H-----HHHTCCSSCCCEEEEETTTTEEEEEETT
T ss_pred CcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecch--h-----hccccccCCceeEEEcCCCCeEEEEECC
Confidence 4579999999988887766555 455555421 11110000 0 000011135789999997 557788788
Q ss_pred CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec--ceEEEECC
Q psy2085 122 EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD--DDQAWTKE 187 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD--~IKIWD~~ 187 (358)
...+-..|.. ++.+..+......-...- +-++|-.|+|.++|+..+++. .+-++...
T Consensus 194 s~~L~~~d~~-g~~~~~~~L~~g~~~l~~--------~~~qpEGia~d~~G~lyIvsE~n~~y~f~~~ 252 (255)
T 3qqz_A 194 SRALQEVTLV-GEVIGEMSLTKGSRGLSH--------NIKQAEGVAMDASGNIYIVSEPNRFYRFTPQ 252 (255)
T ss_dssp TTEEEEECTT-CCEEEEEECSTTGGGCSS--------CCCSEEEEEECTTCCEEEEETTTEEEEEEC-
T ss_pred CCeEEEEcCC-CCEEEEEEcCCccCCccc--------ccCCCCeeEECCCCCEEEEcCCceEEEEEec
Confidence 8999999965 557776664321100000 112347899999999777766 44444443
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=90.72 E-value=2.6 Score=44.19 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=45.5
Q ss_pred EeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEee-cCCCCCeeEEEEcCCCCEEEEEeC-
Q psy2085 48 STSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILS-DDYSSELNSIAINPVHQLICVGTI- 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS-~D~s~~In~i~~np~~~llasGs~- 121 (358)
...+.|||||+.|+.+.... .+|.++++.+... +.+ .+.. ++. .....+.|+|++..|+..+.
T Consensus 223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~--------~~~--lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~ 291 (751)
T 2xe4_A 223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS--------EDV--CLYEEHNP-LFSAFMYKAADTNTLCIGSQS 291 (751)
T ss_dssp CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG--------GCE--EEEECCCT-TCEEEEEECTTSSEEEEEEEC
T ss_pred eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch--------hcE--EEEecCCC-ceEEEEEECCCCCEEEEEecC
Confidence 35689999999887764321 2677788765321 100 1111 111 23567899999997766553
Q ss_pred --CCeEEEEeCCCC
Q psy2085 122 --EGKVEAWDPRMK 133 (358)
Q Consensus 122 --DGtV~iWD~Rs~ 133 (358)
...|.++|+.++
T Consensus 292 ~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 292 PETAEVHLLDLRKG 305 (751)
T ss_dssp SSCEEEEEEESSSC
T ss_pred CCCceEEEEECCCC
Confidence 345777888765
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=90.67 E-value=13 Score=36.16 Aligned_cols=131 Identities=10% Similarity=-0.072 Sum_probs=73.2
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEE--eecCCC---------CCeeEEEE--------
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEI--LSDDYS---------SELNSIAI-------- 109 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~--LS~D~s---------~~In~i~~-------- 109 (358)
..++|+|+|++|..+-....+|..++.......+. ....+.- -...+. ..-..+++
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~-----~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~ 350 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLA-----VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAG 350 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBC-----CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccC-----cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccc
Confidence 46999999998877766778999988763211110 0000000 000010 23567888
Q ss_pred -cCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccc--cCCCceeeEEcCCCCEEEEec----ceE
Q psy2085 110 -NPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGK--ASSDESSEEEEEEEEEEESSD----DDQ 182 (358)
Q Consensus 110 -np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt--Rs~~P~sI~fs~d~~~llSaD----~IK 182 (358)
.+++.++++-+..+.|+.+|+ ++ .+.++.+........+ .+|..++ +-..|..|+++|....|+-+| .|+
T Consensus 351 dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G~g~~~~~G~-~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 351 EEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAGRGNSREWGY-VDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp SSCCEEEEEEETTTTEEEEECT-TS-EEEEEECCCTTCSSCC-BCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred cCCCCcEEEEECCCCEEEEECC-CC-CEEEEEeCCCCCcccc-CCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 677888888888899999996 55 4445543221000000 1110111 334568999994444454444 777
Q ss_pred EEECC
Q psy2085 183 AWTKE 187 (358)
Q Consensus 183 IWD~~ 187 (358)
..+++
T Consensus 428 ~i~~e 432 (433)
T 4hw6_A 428 KIAPE 432 (433)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 77654
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=90.63 E-value=1.2 Score=44.49 Aligned_cols=84 Identities=11% Similarity=0.053 Sum_probs=54.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eeeeeeccCc-eEEEEEeecC---CCCCeeEEEEcCC---CCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKFERCFDSE-VVTFEILSDD---YSSELNSIAINPV---HQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~~r~~d~e-~v~f~~LS~D---~s~~In~i~~np~---~~llas 118 (358)
.+..+..||+|.+|+..| +.+|.|-+++... .......+.. .+..--+.+- -...|..+-|||- +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEec--CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 467899999999998877 4589999998321 1110000000 0111112211 1267999999995 457888
Q ss_pred EeCCCeEEEEeCCC
Q psy2085 119 GTIEGKVEAWDPRM 132 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs 132 (358)
=++|++|++||+..
T Consensus 145 LtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 145 LKEDDTITMFDILN 158 (452)
T ss_dssp EETTSCEEEEETTC
T ss_pred EecCCEEEEEEccc
Confidence 89999999999976
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=90.44 E-value=2.3 Score=41.51 Aligned_cols=109 Identities=11% Similarity=0.024 Sum_probs=63.7
Q ss_pred EeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCC--
Q psy2085 48 STSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEG-- 123 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DG-- 123 (358)
-..++++| ++..|.++-.. +.|+.+|+....+... .. . ....+.|+|+++++ ++++...++
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~------------~~-~-~~~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTV------------YS-G-LSKVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEE------------EC-C-CSCEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEE------------ec-C-CCCcceEEEeCCCCEEEEEeCCCCcc
Confidence 36789998 45567666443 7899999876432211 00 1 14578999999998 666655333
Q ss_pred --eEEEEeCCCCcee--EEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEE--ec-ceEEEECCCCc
Q psy2085 124 --KVEAWDPRMKVKA--GTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 124 --tV~iWD~Rs~~~i--~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.|-..+ +.+... ..+....+ |..|+++| +|...++ .+ .|..+|..++.
T Consensus 204 ~~~v~~~~-~~g~~~~~~~l~~~~~------------------p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 204 RPNNYILT-RESGFKVITELTKGQN------------------CNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp SEEEEEEE-GGGTSCSEEEEEECSS------------------CCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred cceEEEEe-CCCceeeeeeeccCCC------------------ceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 233333 333221 22221111 26799999 5554444 23 88899988765
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=89.98 E-value=13 Score=34.90 Aligned_cols=111 Identities=10% Similarity=-0.053 Sum_probs=70.5
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.+.++.....+. ++..+. ..-+.|++.|.++ ++.+-... +.|
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~------------l~~~~l-~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV------------LLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE------------EECTTC-SCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE------------EEeCCC-CCcceEEEecCcCeEEEeccCCCCEE
Confidence 46789998777777776667799999987532111 111111 3568999999655 55555555 888
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+.... ...+-. .. -..|+.|+|+|++..|+-+| .|..+|.+.
T Consensus 185 ~r~~~dG~~-~~~~~~-~~---------------~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 185 EASSMDGSG-RRIIAD-TH---------------LFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEETTSCS-CEESCC-SS---------------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCC-cEEEEE-CC---------------CCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 888875432 222211 00 01237899999888888665 788888763
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=89.97 E-value=13 Score=35.23 Aligned_cols=111 Identities=11% Similarity=-0.032 Sum_probs=69.6
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCC-CeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIE-GKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~D-GtV 125 (358)
...+++.+.+..|..+-...++|.+.++.....+. ++..+. ..-+.|++.|.++ ++.+-... +.|
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~------------l~~~~l-~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV------------LLWQSL-EKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE------------EECSSC-SCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE------------eecCCC-CCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 36788888777777776667788888876432110 111111 3568999998765 55554445 788
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
...|+........+..... .|+.|+|+|++..|+-+| .|..+|.+.
T Consensus 228 ~r~~~dG~~~~~~~~~~~~-----------------~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 228 EASSMDGSGRRIIADTHLF-----------------WPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEETTSCSCEEEECSSCS-----------------CEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEeCCCCCcEEEEECCCC-----------------CeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 8888764433222221111 127899999888888665 788888753
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=89.81 E-value=5.8 Score=40.76 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=21.6
Q ss_pred CCCC--EEEEEEecCCeEEEEEcCCCceeee
Q psy2085 55 PDGQ--YVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 55 pDG~--~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
.||+ .+++.++.++.+.++|..+..+...
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 5784 4556678899999999988765543
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=89.29 E-value=12 Score=35.79 Aligned_cols=116 Identities=8% Similarity=-0.020 Sum_probs=70.2
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-CCCEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-VHQLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~~~llasGs~DGt 124 (358)
..+..++|.+.+..|..+-...++|..+++...... .... .++..+ ......|++.+ .+.+..+-+..+.
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~~~~--~~~~~~-~~~p~glavD~~~~~lY~~d~~~~~ 182 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYD--TVISRD-IQAPDGLAVDWIHSNIYWTDSVLGT 182 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCE--EEECSS-CSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------Ccce--EEEeCC-CCCcccEEEEecCCceEEEECCCCe
Confidence 456889999987788777666788998988642100 0000 011111 14578899998 4567777778899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
|.+.|+..+.....+..... .|..|+++|.+..|+-+| .|...+++
T Consensus 183 I~~~~~~g~~~~~l~~~~~~-----------------~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEECTTTCSEEEEEECSSC-----------------CEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred EEEEeCCCCceEEEEeCCCC-----------------CcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 99999876654444432211 126788888766666433 45555654
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=89.25 E-value=4.5 Score=40.83 Aligned_cols=116 Identities=16% Similarity=0.061 Sum_probs=67.7
Q ss_pred CEeEEEE-------cCCCCEEEEEEecC------CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC-C
Q psy2085 47 VSTSVRI-------SPDGQYVLSTGIYK------PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP-V 112 (358)
Q Consensus 47 ~v~~v~~-------SpDG~~LlatG~~d------~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np-~ 112 (358)
....|+| +++|++|+++.... ..|.+++-.. ...+....+...+ . .+ ...+.++++| +
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~-~G~~~~~~~~~~v--~----~~-~~p~giavdp~~ 258 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA-DGTFDDRSDIQLI--A----AY-KQCNGATIHPIN 258 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT-TSCCSTTSCEEEE--E----EE-SCCCCEEECTTT
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC-CCceeecccceee--c----cC-CCceEEEEcCCC
Confidence 4789999 99999887775433 1355665332 1112100000011 1 11 3457889999 5
Q ss_pred CCEEEEEeCCCeEEEEeCC-------CCce-----------eEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 113 HQLICVGTIEGKVEAWDPR-------MKVK-----------AGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 113 ~~llasGs~DGtV~iWD~R-------s~~~-----------i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
+.|+++-..+|.|..+|+. ++.. ...+ ..+.. ..|..|+|+|+|+
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~----------------~~p~~ia~~p~G~ 322 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADP----------------SWEFQIFIHPTGK 322 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSS----------------SCCEEEEECTTSS
T ss_pred CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCC----------------CCceEEEEcCCCC
Confidence 6788888889999999997 5543 1122 11111 1127899999999
Q ss_pred EEEEec----ceEEEEC
Q psy2085 174 EEESSD----DDQAWTK 186 (358)
Q Consensus 174 ~llSaD----~IKIWD~ 186 (358)
.|+-+| .|+.+|.
T Consensus 323 ~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 323 YAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred EEEEEeCCCCEEEEEec
Confidence 666544 6766443
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=89.23 E-value=1.7 Score=44.73 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=41.4
Q ss_pred CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCC
Q psy2085 68 PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFN 144 (358)
Q Consensus 68 ~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~ 144 (358)
+.|..||+.+........... .+..-.+.-.++++..|+.||.++.||.++++.+-.+..+..
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~--------------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERF--------------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESS--------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CeEEEEECCCCCEEeEecCCC--------------CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 567777777665554432211 111111223567888899999999999999999988876543
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=88.82 E-value=5.9 Score=39.50 Aligned_cols=112 Identities=7% Similarity=-0.035 Sum_probs=63.5
Q ss_pred EEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCce-EEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 52 RISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEV-VTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 52 ~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~-v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
-.+.+|.-|+.. .++.||+-++.... .+. .++.+. + .+ +.|..+..||+|.+||.-|. .+|.+-.+
T Consensus 27 ~~~~n~t~i~~a--~~n~iR~~~i~~~~-~Yk-~L~~~~~i-------~f-~~i~qlvlSpsG~lLAl~g~-~~V~Vv~L 93 (452)
T 3pbp_A 27 FSSQNGTRIVFI--QDNIIRWYNVLTDS-LYH-SLNFSRHL-------VL-DDTFHVISSTSGDLLCLFND-NEIFVMEV 93 (452)
T ss_dssp EEETTTTEEEEE--ETTEEEEEETTTCS-SCE-EEECTTTC-------CC-CTTCEEEECTTSSEEEEECS-SEEEEEEC
T ss_pred EEEcCCCEEEEE--ECCEEEEEECCCCC-cce-EEecCccc-------cc-CceeEEEECCCCCEEEEecC-CeEEEEEe
Confidence 445577766543 35789999887432 110 000000 0 11 35788999999999999775 57777665
Q ss_pred CCCce------------eEEEeCCCCccccccCCCccccccCCCc-eeeEEcCCC---CEEE--Eec-ceEEEECCC
Q psy2085 131 RMKVK------------AGTLDCAFNCISNERDTEEKEGKASSDE-SSEEEEEEE---EEEE--SSD-DDQAWTKEI 188 (358)
Q Consensus 131 Rs~~~------------i~~L~~~~~~v~~~~~i~gl~GtRs~~P-~sI~fs~d~---~~ll--SaD-~IKIWD~~t 188 (358)
-.+.. +.++...... + .++.| .++.|||-+ ..|+ +.| +|++||+..
T Consensus 94 P~~~~~~~~~~~~~~~q~~ty~l~~~~-----------~-~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 94 PWGYSNVEDVSIQDAFQIFHYSIDEEE-----------V-GPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CTTCSCCCCHHHHHTTEEEEEEGGGCC--------------CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cCccccCcccccccccceeEEEcCCcc-----------c-CCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 42211 1112111000 0 00111 899999954 3444 688 999999986
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=88.74 E-value=25 Score=37.29 Aligned_cols=111 Identities=10% Similarity=-0.042 Sum_probs=71.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeC-CCeE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTI-EGKV 125 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~-DGtV 125 (358)
...|++.+.|+.|..+-...++|.+.++.....+. ++..+. ...+.|++.|.++ |+.+-.. .+.|
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~------------l~~~~l-~~P~gIaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEE------------EEECTT-CCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEE------------EEeCCC-CCcceEEEecCCCCEEEecCCCCCeE
Confidence 46799999888888887778899999987532111 111111 3578999999855 4444423 3789
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
+..++........+.... ..|+.|++++.+..|+-+| .|...|+..
T Consensus 540 ~~~~~dG~~~~~lv~~~l-----------------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 540 KKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EEEETTSCCEEEEECSSC-----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEecCCCceEEEEeCCC-----------------CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 988886443332232211 1237899998888888766 677777753
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=88.52 E-value=6.5 Score=35.06 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=65.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
.+.++.+.++|..++ |+.++.|.+||.. .......... . ..+.++.+.+++.+++. + +.|.
T Consensus 138 ~~~~~~~~~~g~l~v--gt~~~~l~~~d~~-g~~~~~~~~~----------~---~~~~~~~~d~~g~l~v~-t--~~l~ 198 (330)
T 3hxj_A 138 IYATPIVSEDGTIYV--GSNDNYLYAINPD-GTEKWRFKTN----------D---AITSAASIGKDGTIYFG-S--DKVY 198 (330)
T ss_dssp CCSCCEECTTSCEEE--ECTTSEEEEECTT-SCEEEEEECS----------S---CCCSCCEECTTCCEEEE-S--SSEE
T ss_pred eeeeeEEcCCCEEEE--EcCCCEEEEECCC-CCEeEEEecC----------C---CceeeeEEcCCCEEEEE-e--CEEE
Confidence 456667777887443 4566788888877 3332221111 0 34666777777776654 4 8889
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~tG~ 190 (358)
++| .+++.+.........+ .++...++|...+++ + .|..+|. +|+
T Consensus 199 ~~d-~~g~~~~~~~~~~~~~-----------------~~~~~~~~g~l~v~t~~~gl~~~~~-~g~ 245 (330)
T 3hxj_A 199 AIN-PDGTEKWNFYAGYWTV-----------------TRPAISEDGTIYVTSLDGHLYAINP-DGT 245 (330)
T ss_dssp EEC-TTSCEEEEECCSSCCC-----------------SCCEECTTSCEEEEETTTEEEEECT-TSC
T ss_pred EEC-CCCcEEEEEccCCcce-----------------eceEECCCCeEEEEcCCCeEEEECC-CCC
Confidence 999 6777666555433322 567788888766654 5 6777775 455
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=88.23 E-value=14 Score=38.47 Aligned_cols=124 Identities=9% Similarity=0.066 Sum_probs=75.2
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEE-EeecCCCCCeeEEEEcCCCCEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFE-ILSDDYSSELNSIAINPVHQLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~-~LS~D~s~~In~i~~np~~~llasGs~DGt 124 (358)
..|.++...++|..-+ |++++-|.+||..+...+ ....... .-. .++. ..|.+++..+++.+|-.|+.++-
T Consensus 357 ~~V~~i~~d~~g~lWi--Gt~~~Gl~~~~~~~~~~~--~~~~~~~-~~~~~l~~---~~v~~i~~d~~g~~lWigt~~~G 428 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWI--GTNDGGLNLYNPITQRFT--SYTLQED-ESARGIGS---NNIKAVYVDEKKSLVYIGTHAGG 428 (795)
T ss_dssp SSEEEEEECTTSCEEE--EESSSCEEEECTTTCCEE--EECCC-------CCSC---SCEEEEEEETTTTEEEEEETTTE
T ss_pred CeeEEEEECCCCCEEE--EECCCCeEEEcCCCCcEE--EEecCCC-CcccCCCC---ccEEEEEEcCCCCEEEEEeCcCc
Confidence 3589999999998543 566667999998754322 1110000 000 0111 46889999888885666788778
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
|.+||+.+++.. .+....... ....+ .+|...++|...+++. .+.+||..+++
T Consensus 429 l~~~d~~~~~~~-~~~~~~~~l-~~~~v-----------~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 429 LSILHRNSGQVE-NFNQRNSQL-VNENV-----------YAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp EEEEETTTCCEE-EECTTTSCC-SCSCE-----------EEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred eeEEeCCCCcEE-EeecCCCCc-CCCee-----------EEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 999999887643 332111000 00011 6677777888777666 77788887665
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=88.12 E-value=6.4 Score=38.04 Aligned_cols=124 Identities=15% Similarity=0.238 Sum_probs=69.2
Q ss_pred eEEEEeeCCCCEeEEEEcCC----CC---EEEEEEec--CCeEEEEEcCC--CceeeeeeccCceEEEEEeecCCCCCee
Q psy2085 37 ELIQDFEMPGVSTSVRISPD----GQ---YVLSTGIY--KPRVRCYETDN--LSMKFERCFDSEVVTFEILSDDYSSELN 105 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpD----G~---~LlatG~~--d~~IrvwDl~~--lslk~~r~~d~e~v~f~~LS~D~s~~In 105 (358)
+++|.+.. +..+.|.+-|+ |+ .+++|... ..+|.+|++.. ..++.-...... + ..+ ...+.
T Consensus 60 ~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~p-v-----~t~-~~~py 131 (355)
T 3amr_A 60 KMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHP-I-----ATA-INEVY 131 (355)
T ss_dssp CEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSC-E-----ECC-CSSCC
T ss_pred cEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccC-c-----CCC-CCCee
Confidence 45555543 56788877773 32 34455545 68999998742 222211000001 0 000 02455
Q ss_pred EEEE--cCC-CC-EEEEEeCCCeEEEEeCC-------CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCE
Q psy2085 106 SIAI--NPV-HQ-LICVGTIEGKVEAWDPR-------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEE 174 (358)
Q Consensus 106 ~i~~--np~-~~-llasGs~DGtV~iWD~R-------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ 174 (358)
.+|+ +|. +. .+.....+|.+..|++. +.+.+.++.....+ -.+...+....
T Consensus 132 Glcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~------------------EgcvvDd~~g~ 193 (355)
T 3amr_A 132 GFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQT------------------EGMAADDEYGR 193 (355)
T ss_dssp CEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCE------------------EEEEEETTTTE
T ss_pred EEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCc------------------ceEEEcCCCCe
Confidence 5666 775 43 35555668999999982 33556777765433 45677777777
Q ss_pred EEEec-ceEEEEC
Q psy2085 175 EESSD-DDQAWTK 186 (358)
Q Consensus 175 llSaD-~IKIWD~ 186 (358)
|+-++ .+-||-.
T Consensus 194 Lyv~eEd~GIw~~ 206 (355)
T 3amr_A 194 LYIAEEDEAIWKF 206 (355)
T ss_dssp EEEEETTTEEEEE
T ss_pred EEEecccceEEEE
Confidence 77666 4456644
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=87.84 E-value=12 Score=33.38 Aligned_cols=107 Identities=16% Similarity=0.088 Sum_probs=60.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
..+.++.+.++|...+ |++++.|.++|... ......... . ..+.++.+.+++. |..|+.+|.|
T Consensus 215 ~~~~~~~~~~~g~l~v--~t~~~gl~~~~~~g-~~~~~~~~~-----------~--~~~~~~~~~~~g~-l~v~t~~ggl 277 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYV--TSLDGHLYAINPDG-TEKWRFKTG-----------K--RIESSPVIGNTDT-IYFGSYDGHL 277 (330)
T ss_dssp CCCSCCEECTTSCEEE--EETTTEEEEECTTS-CEEEEEECS-----------S--CCCSCCEECTTSC-EEEECTTCEE
T ss_pred cceeceEECCCCeEEE--EcCCCeEEEECCCC-CEeEEeeCC-----------C--CccccceEcCCCe-EEEecCCCCE
Confidence 3466777777776432 34566677776432 111111100 0 2234455555554 4557888899
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-c-ceEEEECC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-D-DDQAWTKE 187 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-D-~IKIWD~~ 187 (358)
.++|+ +++.+..+..+...+ .++...++|...+++ + .+.+....
T Consensus 278 ~~~d~-~g~~~~~~~~~~~~~-----------------~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 278 YAINP-DGTEKWNFETGSWII-----------------ATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp EEECT-TSCEEEEEECSSCCC-----------------SCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred EEECC-CCcEEEEEEcCCccc-----------------cceEEcCCCEEEEEcCCCeEEEEecc
Confidence 99996 677766665443322 557777788877764 4 77766543
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=87.49 E-value=6.6 Score=36.99 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=48.8
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +.+ -..++|.|||+.+ ++ ...++|.+++ . ......... ... .+.....+.|+|+|+
T Consensus 22 ~~~~va~~l~~---P~~ia~~pdG~l~-V~-e~~g~I~~i~-~-g~~~~~~~~-------~v~-~~g~~~p~gia~~pdf 86 (352)
T 2ism_A 22 RVEEVVGGLEV---PWALAFLPDGGML-IA-ERPGRIRLFR-E-GRLSTYAEL-------SVY-HRGESGLLGLALHPRF 86 (352)
T ss_dssp CEEEEECCCSC---EEEEEECTTSCEE-EE-ETTTEEEEEE-T-TEEEEEEEC-------CCC-CSTTCSEEEEEECTTT
T ss_pred EEEEEECCCCC---ceEEEEcCCCeEE-EE-eCCCeEEEEE-C-CCccEeecc-------eEe-ecCCCCceeEEECCCC
Confidence 5566554 333 4789999999954 44 3468999998 2 221110000 001 111257899999998
Q ss_pred ---CCEEEEEeCC-----CeEEEEeCCCC
Q psy2085 113 ---HQLICVGTIE-----GKVEAWDPRMK 133 (358)
Q Consensus 113 ---~~llasGs~D-----GtV~iWD~Rs~ 133 (358)
+.+.++-+.. +.|..|++..+
T Consensus 87 ~~~g~lYv~~~~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 87 PQEPYVYAYRTVAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEEECSS
T ss_pred CCCCEEEEEEecCCCCCccEEEEEEeCCC
Confidence 4455554433 67777887643
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=86.84 E-value=18 Score=32.91 Aligned_cols=119 Identities=8% Similarity=0.016 Sum_probs=70.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG 123 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG 123 (358)
+...+..+++.|++..|+++...+++|-..|+. . +..+.. .+. .....-.|++.+++.++++.-.++
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g--~v~~~i--------~l~--g~~D~EGIa~~~~g~~~vs~E~~~ 91 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G--DLIRTI--------PLD--FVKDLETIEYIGDNQFVISDERDY 91 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C--CEEEEE--------ECS--SCSSEEEEEECSTTEEEEEETTTT
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C--CEEEEE--------ecC--CCCChHHeEEeCCCEEEEEECCCC
Confidence 445699999999988888887778888888886 2 222221 111 013356777778777666644567
Q ss_pred eEEEEeCCCCcee---EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec--ceEEEEC
Q psy2085 124 KVEAWDPRMKVKA---GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD--DDQAWTK 186 (358)
Q Consensus 124 tV~iWD~Rs~~~i---~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD--~IKIWD~ 186 (358)
.+-++++.....+ .....+.......... -.|+|+|.++.|+. .. ...||..
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~-----------EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGF-----------EGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCC-----------EEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCc-----------ceEEEeCCCCEEEEEECcCCceEEEE
Confidence 8888876554432 2232111000001111 57999999877764 33 4444444
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=85.59 E-value=26 Score=33.49 Aligned_cols=112 Identities=10% Similarity=-0.030 Sum_probs=70.7
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEe-CCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGT-IEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs-~DGt 124 (358)
....+++.+.+..|..+-...++|.+.++.....+. ++..+. ...+.|++.|.++ ++.+-. ..+.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~------------l~~~~~-~~P~~iavdp~~g~ly~td~~~~~~ 226 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT------------LFRENG-SKPRAIVVDPVHGFMYWTDWGTPAK 226 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEE------------EEECSS-CCEEEEEEETTTTEEEEEECSSSCC
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEE------------EEeCCC-CCcceEEEecccCeEEEEeCCCCCE
Confidence 457889988766777776667889999887532111 111111 3578999999765 444432 2478
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEI 188 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~t 188 (358)
|...|+........+.... ..|+.|++++++..|+-+| .|...|.+.
T Consensus 227 I~~~~~dG~~~~~~~~~~l-----------------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 227 IKKGGLNGVDIYSLVTENI-----------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEEEETTSCSCEEEECSSC-----------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEeCCCCccEEEEECCC-----------------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 8888875433322222111 1227899999988888766 788888764
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=85.08 E-value=5.7 Score=40.07 Aligned_cols=112 Identities=9% Similarity=-0.033 Sum_probs=65.1
Q ss_pred EeEEEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEE-------cCCCC-EEEE
Q psy2085 48 STSVRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAI-------NPVHQ-LICV 118 (358)
Q Consensus 48 v~~v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~-------np~~~-llas 118 (358)
...++|+| ++..|+++-.....|++.|+.+..++..... +.......+.|+| ++++. ++++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~----------~~~~~~~p~~ia~~~~~~~~d~~G~~lyva 210 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI----------NTIPTNRIRSIAFNKKIEGYADEAEYMIVA 210 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC----------TTSSCSBEEEEEECCCBTTTBCTTCEEEEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc----------CccccCCCcEEEEeecccccCCCCCEEEEE
Confidence 56899999 5666777655556899999886543311110 0000135789999 99998 5555
Q ss_pred EeCCCe------EEEEeCCC-Ccee-----EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceE
Q psy2085 119 GTIEGK------VEAWDPRM-KVKA-----GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQ 182 (358)
Q Consensus 119 Gs~DGt------V~iWD~Rs-~~~i-----~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IK 182 (358)
...++. |.+.+... +... ..+..-. .|..++.+|++..|+-+| .|.
T Consensus 211 d~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~------------------~p~giavdp~~g~LYvtd~~~g~V~ 272 (496)
T 3kya_A 211 IDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK------------------QCNGATIHPINGELYFNSYEKGQVF 272 (496)
T ss_dssp ECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES------------------CCCCEEECTTTCCEEEEETTTTEEE
T ss_pred eCCCCCcccCceEEEEecCCCCceeecccceeeccCC------------------CceEEEEcCCCCeEEEEECCCCEEE
Confidence 444322 56666333 1211 1221111 126789999666666433 788
Q ss_pred EEECC
Q psy2085 183 AWTKE 187 (358)
Q Consensus 183 IWD~~ 187 (358)
.+|+.
T Consensus 273 r~d~~ 277 (496)
T 3kya_A 273 RLDLV 277 (496)
T ss_dssp EECHH
T ss_pred EEecc
Confidence 88987
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=85.00 E-value=25 Score=32.81 Aligned_cols=111 Identities=10% Similarity=0.037 Sum_probs=70.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV 125 (358)
....++|.+.++.|..+-...++|..+++....... ++..+. ...+.+++.+. +.+..+-...+.|
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~------------~~~~~~-~~p~glavd~~~g~ly~~d~~~~~I 140 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE------------VVSTGL-ESPGGLAVDWVHDKLYWTDSGTSRI 140 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE------------EECSSC-SCCCEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceE------------EEeCCC-CCccEEEEecCCCeEEEEcCCCCeE
Confidence 467899998888888776677889999987532110 111111 34578999875 4566777778899
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
.+.|+........+..... .|..|+++|.+..|+-+| .|...+++
T Consensus 141 ~~~~~dG~~~~~l~~~~l~-----------------~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 141 EVANLDGAHRKVLLWQSLE-----------------KPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EEEETTSCSCEEEECTTCS-----------------CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEcCCCCceEEEEeCCCC-----------------CcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 9999865443322322111 127788998777777554 34455554
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=84.68 E-value=7.1 Score=36.83 Aligned_cols=86 Identities=15% Similarity=0.181 Sum_probs=46.2
Q ss_pred ceeEEEE-eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-
Q psy2085 35 RIELIQD-FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV- 112 (358)
Q Consensus 35 rIeliqd-fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~- 112 (358)
+++++.+ +..| ..|+|.|||++|+++ ...++|++++... ... ....+...+ . .....+.+.|+++|+
T Consensus 9 ~~~~va~~l~~P---~~i~~~pdG~~l~V~-e~~G~i~~~~~~g-~~~-~~~~~~~~v----~-~~g~~g~~gia~~pdf 77 (353)
T 2g8s_A 9 NVEVLQDKLDHP---WALAFLPDNHGMLIT-LRGGELRHWQAGK-GLS-APLSGVPDV----W-AHGQGGLLDVVLAPDF 77 (353)
T ss_dssp EEEEEEEEESSE---EEEEECSTTCCEEEE-ETTTEEEEEETTT-EEC-CCCBSCCCC----C-CSTTCSEEEEEECTTH
T ss_pred EEEEEECCCCCc---EEEEEcCCCCEEEEE-eCCceEEEEeCCC-cee-eEecCCccc----c-cCCCCCceeEEECCCC
Confidence 4555544 4444 789999999944444 3578999998532 111 000000000 0 111156799999995
Q ss_pred ---CCEEEEEeC-------CCeEEEEeCC
Q psy2085 113 ---HQLICVGTI-------EGKVEAWDPR 131 (358)
Q Consensus 113 ---~~llasGs~-------DGtV~iWD~R 131 (358)
+.+.++-+. ...|..|++.
T Consensus 78 ~~~g~lYv~~~~~~~~g~~~~~v~r~~~~ 106 (353)
T 2g8s_A 78 AQSRRIWLSYSEVGDDGKAGTAVGYGRLS 106 (353)
T ss_dssp HHHCEEEEEEEEECSSSCEEEEEEEEEEC
T ss_pred CCCCEEEEEEeCCCCCCCceeEEEEEEEC
Confidence 445555433 2256566654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=84.24 E-value=16 Score=34.19 Aligned_cols=70 Identities=14% Similarity=0.053 Sum_probs=41.3
Q ss_pred CCEeEEEEcCC---CCEEEEEEecC-----CeEEEEEcCCCceeeeeeccCceEEEEEee--cCCCCCeeEEEEcCCCCE
Q psy2085 46 GVSTSVRISPD---GQYVLSTGIYK-----PRVRCYETDNLSMKFERCFDSEVVTFEILS--DDYSSELNSIAINPVHQL 115 (358)
Q Consensus 46 ~~v~~v~~SpD---G~~LlatG~~d-----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS--~D~s~~In~i~~np~~~l 115 (358)
.....|+|+|| +.+|.++-+.. ++|..|++....+.- .+.+ +.-+. ....+..+.|+|.|++.|
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~-----~~~l-~~~~p~~~~~~h~~~~l~~~pdG~L 148 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVL-----DRVV-LDGIPARPHGLHSGGRIAFGPDGML 148 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEE-----EEEE-EEEECCCTTCCCCCCCEEECTTSCE
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCc-----eEEE-EEeCCCCCCCCcCCceEEECCCCCE
Confidence 46789999999 66676665543 678888876432210 0111 11121 111134578999999988
Q ss_pred EEEEeC
Q psy2085 116 ICVGTI 121 (358)
Q Consensus 116 lasGs~ 121 (358)
.++-++
T Consensus 149 yv~~G~ 154 (352)
T 2ism_A 149 YVTTGE 154 (352)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 777543
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=83.20 E-value=28 Score=33.24 Aligned_cols=127 Identities=7% Similarity=-0.058 Sum_probs=73.5
Q ss_pred EeEEEE---cCCCCEEEEEEe------------cCCeEEEEEcC---CCceeeeeeccCceEEEEEeec-CCCCCeeEEE
Q psy2085 48 STSVRI---SPDGQYVLSTGI------------YKPRVRCYETD---NLSMKFERCFDSEVVTFEILSD-DYSSELNSIA 108 (358)
Q Consensus 48 v~~v~~---SpDG~~LlatG~------------~d~~IrvwDl~---~lslk~~r~~d~e~v~f~~LS~-D~s~~In~i~ 108 (358)
+..|.| -|+|+.++++-. -+..|..||+. +....+.-.+....-.+.-++. .+ ...|.++
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~-~~~nDva 143 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRP-FGVVQSA 143 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCC-EEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccc-cCCceeE
Confidence 589999 688876543210 15679999988 4332221111000000000000 01 3589999
Q ss_pred EcCCCCEEEEEeCC-CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec---ceEEE
Q psy2085 109 INPVHQLICVGTIE-GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD---DDQAW 184 (358)
Q Consensus 109 ~np~~~llasGs~D-GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD---~IKIW 184 (358)
+.++|+..++++.- +.|-..|+.-. .+..+........ ..-|+ +.|+++|+|..|+..+ .+..+
T Consensus 144 vD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~---~~~G~--------nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 144 QDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGG---QRPGY--------SGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp ECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSS---SCCSC--------SEEEEETTTTEEEEESSSSSEEEE
T ss_pred ECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcc---cccCc--------ceEEEeCCCCEEEEEcCCCeEEEE
Confidence 99999999999988 88888887644 3333321111100 00111 7799999999888754 67777
Q ss_pred ECC
Q psy2085 185 TKE 187 (358)
Q Consensus 185 D~~ 187 (358)
|+.
T Consensus 212 D~~ 214 (334)
T 2p9w_A 212 DVS 214 (334)
T ss_dssp ECS
T ss_pred cCC
Confidence 865
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=82.93 E-value=17 Score=37.68 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=69.7
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEA 127 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~i 127 (358)
|.++...++|+..+ |+...-|.+||..+...+ ..... . . ...|.+|...+++.+.+. +.++-|.+
T Consensus 175 i~~i~~d~~g~lwi--gt~~~Gl~~~~~~~~~~~--~~~~~-------~-~--~~~i~~i~~d~~g~lwig-t~~~Gl~~ 239 (795)
T 4a2l_A 175 IASTLYRQGDQIYI--GTSTDGLYTYSITQKTFE--KVIPI-------L-G--TKQIQAILQQSPTRIWVA-TEGAGLFL 239 (795)
T ss_dssp CEEEEEEETTEEEE--EESSSCEEEEETTTCCEE--ECC--------------CCCEEEEEEEETTEEEEE-EBSSCEEE
T ss_pred eEEEEECCCCCEEE--EECCCCEEEEeCCCCeEE--EecCC-------C-C--CCeeEEEEEcCCCCEEEE-ECCCCeEE
Confidence 78888888887554 344445889997654322 11000 0 0 146888888887776664 54444888
Q ss_pred EeCCCCceeEEEeCCCCccc-cccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGTLDCAFNCIS-NERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~-~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
||+.+++..........+.. ....+ .+|...++|...++++ -|.+||..+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~l~~~~i-----------~~i~~d~~g~lWigt~~Gl~~~~~~~~~ 293 (795)
T 4a2l_A 240 INPKTKEIKNYLHSPSNPKSISSNYI-----------RSLAMDSQNRLWIGTFNDLNIYHEGTDS 293 (795)
T ss_dssp EETTTTEEEEECCCTTCTTSCSCSBE-----------EEEEECTTSCEEEEESSCEEEEETTTTE
T ss_pred EeCCCCeEEEeecCCCCccccCCCeE-----------EEEEEcCCCCEEEEeCChhheEcCCCCe
Confidence 99887754322211100000 00011 6788888888888777 88889987665
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=82.26 E-value=31 Score=35.24 Aligned_cols=103 Identities=7% Similarity=0.032 Sum_probs=63.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC-CCEEEEEeCCCeE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV-HQLICVGTIEGKV 125 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~-~~llasGs~DGtV 125 (358)
....|+|++.+..|+.+-...++|..+++...... + .++..+ ....+.|++.+. +.+..+-+..+.|
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~-~----------~v~~~~-~~~P~GlAvD~~~~~ly~~d~~~~~I 108 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV-Q----------NVVVSG-LLSPDGLACDWLGEKLYWTDSETNRI 108 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----C-E----------EEECSS-CSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce-E----------EEEeCC-CCCcCeEEEEecCCEEEEEeCCCCEE
Confidence 35788999988888877656678988888653110 0 011111 145789999985 4577777788999
Q ss_pred EEEeCCCCceeEEEe-CCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec
Q psy2085 126 EAWDPRMKVKAGTLD-CAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD 179 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~-~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD 179 (358)
.+-|+....+ .+|. ... ..|..|+++|.+..|+-+|
T Consensus 109 ~v~~~dG~~~-~~l~~~~l-----------------~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 109 EVSNLDGSLR-KVLFWQEL-----------------DQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp EEEETTSCSC-EEEECSSC-----------------SCCCCEEEETTTTEEEEEE
T ss_pred EEEECCCCCE-EEEEeCCC-----------------CCCceEEEecCCCeEEEec
Confidence 9999865443 3332 111 1126788888766666444
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=82.26 E-value=24 Score=39.20 Aligned_cols=87 Identities=9% Similarity=0.106 Sum_probs=55.0
Q ss_pred EEEEeeCCC--CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC---
Q psy2085 38 LIQDFEMPG--VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV--- 112 (358)
Q Consensus 38 liqdfe~~~--~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~--- 112 (358)
+++.+..|. .|..++... .+|+.+ + .+.|.++++.+..+.... . .-+ .+.|.|+++.|.
T Consensus 504 ~~~~w~~p~~~~I~~As~n~--~~vvva-~-g~~l~~fel~~~~L~~~~-------~-~~l----~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 504 LVSEWKEPQAKNISVASCNS--SQVVVA-V-GRALYYLQIHPQELRQIS-------H-TEM----EHEVACLDITPLGDS 567 (1158)
T ss_dssp EEEEECCTTCCCCCEEEECS--SEEEEE-E-TTEEEEEEEETTEEEEEE-------E-EEC----SSCEEEEECCCCSSS
T ss_pred EEEEEECCCCCEEEEEEeCC--CEEEEE-E-CCEEEEEEeeCCceeeec-------c-cCC----CCceEEEEeecCCCC
Confidence 577777764 355655543 345443 3 467888888754332110 0 111 156899999764
Q ss_pred ---CCEEEEEeC-CCeEEEEeCCCCceeEEEe
Q psy2085 113 ---HQLICVGTI-EGKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 113 ---~~llasGs~-DGtV~iWD~Rs~~~i~~L~ 140 (358)
...+|.|.+ |++|+|.++.+-+.+..-.
T Consensus 568 ~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 568 NGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp TTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred cccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 369999997 9999999998766655443
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=82.10 E-value=30 Score=31.58 Aligned_cols=113 Identities=10% Similarity=0.030 Sum_probs=68.6
Q ss_pred CEeEEEEcCCCCEEEEEEecC-CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-EEEEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYK-PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-LICVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d-~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-llasGs~DGt 124 (358)
.-+.+++.|++.+|+.+.... ++|..+++.....+. +.+.+. ..-|.|+++|+++ +..+-+..+.
T Consensus 121 ~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~------------~~~~~~-~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 121 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS------------LVTENI-QWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE------------EECSSC-SCEEEEEEETTTTEEEEEETTTTE
T ss_pred CcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE------------EEECCC-CCceEEEEeccCCEEEEEECCCCe
Confidence 457899999888777765443 788888876422110 111111 4578999998765 5566667789
Q ss_pred EEEEeCCCCceeEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 125 VEAWDPRMKVKAGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
|...|+.... ..++ ..... ...|..|++. +..|+-+| .|..+|..+|+
T Consensus 188 I~~~d~dg~~-~~~~~~~~~~---------------~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 188 ISSIDVNGGN-RKTILEDEKR---------------LAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EEEEETTSCS-CEEEEECTTT---------------TSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEecCCCc-eEEEeecCCc---------------cCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCc
Confidence 9999986433 2333 21110 0112567774 34555433 78888887776
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.96 E-value=40 Score=35.72 Aligned_cols=116 Identities=9% Similarity=0.013 Sum_probs=69.4
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-CEEEEEeCCCe
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH-QLICVGTIEGK 124 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~-~llasGs~DGt 124 (358)
..+..|+|.+.+..|+.+-...++|..+++...... .... .++... ......|++.+.+ .|+.+-+..+.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~------~~~~--~vi~~~-l~~P~GLAvD~~~~~LY~tD~~~~~ 494 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYD--TVISRD-IQAPDGLAVDWIHSNIYWTDSVLGT 494 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CE--EEECSS-CSCCCEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCC------ccee--EEEecC-CCCcceeeeeecCCcEEEEecCCCe
Confidence 346788999977778777666778988888742110 0000 111111 1456789999876 57777778899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec-----ceEEEECC
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD-----DDQAWTKE 187 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-----~IKIWD~~ 187 (358)
|.+.|+..+.....+..... .|..|+++|.+..|+-+| .|.+.+++
T Consensus 495 I~v~~ldG~~~~~l~~~~l~-----------------~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 495 VSVADTKGVKRKTLFRENGS-----------------KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EEEEETTSSSEEEEEECTTC-----------------CEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEEeCCCCeEEEEEeCCCC-----------------CcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 99999875543333322111 126788888766666544 35555554
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=81.24 E-value=9.7 Score=41.28 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=35.9
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 102 SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 102 ~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
..|.+++..++..++.+-+.|+++|+|++.+++++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 45788888888889999999999999999999999988753
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=80.71 E-value=4 Score=41.80 Aligned_cols=77 Identities=16% Similarity=0.205 Sum_probs=48.8
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CC---
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IE--- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~D--- 122 (358)
.+.++.+.+||+.+++.|.....+.+||..+. ++....+.. .+ ..-.++++.+++.+++.|| .+
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~--~W~~~~~~~-------~~---R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSD--SWIPGPDMQ-------VA---RGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGT--EEEECCCCS-------SC---CSSCEEEECTTSCEEEECCCCCSSS
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCC--ceeECCCCC-------cc---ccccceEEecCCeEEEEeCcccCCc
Confidence 34567889999865544435568999998753 222211100 00 1113455667899999999 44
Q ss_pred --CeEEEEeCCCCce
Q psy2085 123 --GKVEAWDPRMKVK 135 (358)
Q Consensus 123 --GtV~iWD~Rs~~~ 135 (358)
..+++||+.+++-
T Consensus 312 ~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 312 FEKNGEVYSPSSKTW 326 (656)
T ss_dssp CCCCEEEEETTTTEE
T ss_pred ccccceEeCCCCCcc
Confidence 5799999988763
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=80.37 E-value=40 Score=32.38 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=69.2
Q ss_pred CCEeEEEE--cCC-CC-EEEEEEecCCeEEEEEcCC---Cce--eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 46 GVSTSVRI--SPD-GQ-YVLSTGIYKPRVRCYETDN---LSM--KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 46 ~~v~~v~~--SpD-G~-~LlatG~~d~~IrvwDl~~---lsl--k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
..+..+++ +|+ |+ |+++++ .++.+..|++.. ... +.-|. |.+ . +.+-.|.+.+..+.|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~-k~G~~~q~~l~~~~~g~~~~~lVR~-------f~l-g----sq~EgcvvDd~~g~L 194 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTG-KEGEFEQYELKADKNGYISGKKVRA-------FKM-N----SQTEGMAADDEYGRL 194 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEEC-SSSEEEEEEEEECTTSCEEEEEEEE-------EEC-S----SCEEEEEEETTTTEE
T ss_pred CCeeEEEEEecCCCCcEEEEEEC-CCCeEEEEEEEeCCCCcccceEEEE-------ecC-C----CCcceEEEcCCCCeE
Confidence 34566777 884 54 677765 458999999842 211 11122 221 1 468889999998888
Q ss_pred EEEeCCCeEEEEeCC--C---CceeEEEeCCCCccccccCCCccccccCCCceeeEE--cCCCC-EEE-Ee--c-ceEEE
Q psy2085 117 CVGTIEGKVEAWDPR--M---KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEE--EEEEE-EEE-SS--D-DDQAW 184 (358)
Q Consensus 117 asGs~DGtV~iWD~R--s---~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~f--s~d~~-~ll-Sa--D-~IKIW 184 (358)
..|-+|.-|-.+|.+ + ++.+..+... .. . ..+ ..|+. .++++ +|+ |+ + +.-||
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g-~l-~--aDv-----------EGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGR-HL-T--RDI-----------EGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSS-SB-C--SCE-----------EEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCC-cc-c--cCc-----------ceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 888998666666744 2 4445444321 00 0 011 33444 56666 555 53 4 99999
Q ss_pred ECC-CCc
Q psy2085 185 TKE-IKK 190 (358)
Q Consensus 185 D~~-tG~ 190 (358)
|.. +.+
T Consensus 260 dr~~~~~ 266 (355)
T 3amr_A 260 DRQGKNK 266 (355)
T ss_dssp ESSTTCC
T ss_pred ECCCCCc
Confidence 997 443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 358 | ||||
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-04 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 0.001 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.003 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 0.003 |
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.1 bits (97), Expect = 6e-05
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
Query: 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIA 108
SV + DGQ V+S + + V+ + N + K T E+ + + S+A
Sbjct: 258 YSVVFTRDGQSVVSGSLDR-SVKLWNLQNANNKS-DSKTPNSGTCEVTYIGHKDFVLSVA 315
Query: 109 INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147
+ I G+ + V WD + L N +
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVI 354
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.6 bits (93), Expect = 2e-04
Identities = 17/108 (15%), Positives = 36/108 (33%), Gaps = 3/108 (2%)
Query: 28 PTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFD 87
P +EL + + V V+ S DG+Y+ + +V +L +
Sbjct: 45 PALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSA 104
Query: 88 SEVVTFEIL---SDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132
+ + S + S+ +P + + G + + WD
Sbjct: 105 ANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIEN 152
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.6 bits (88), Expect = 7e-04
Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 27 LPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF 86
L I R I V +V IS ++V + G K V+ ++ + K
Sbjct: 33 LIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSPVS- 89
Query: 87 DSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146
++ + + + S + P + VG + WD + +
Sbjct: 90 -------QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAP 142
Query: 147 SN 148
+
Sbjct: 143 AC 144
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 37.9 bits (86), Expect = 0.001
Identities = 7/84 (8%), Positives = 18/84 (21%), Gaps = 12/84 (14%)
Query: 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIA 108
+ + D + V YE +++ ++ +
Sbjct: 11 SCHAWNKDRTQIAICP-NNHEVHIYEKSGNKWVQVHEL-----------KEHNGQVTGVD 58
Query: 109 INPVHQLICVGTIEGKVEAWDPRM 132
P I + W +
Sbjct: 59 WAPDSNRIVTCGTDRNAYVWTLKG 82
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 36.7 bits (83), Expect = 0.003
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVV 91
+ L Q ++PG + +SPD +Y+ + RV Y +S +
Sbjct: 27 LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP 82
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 36.6 bits (83), Expect = 0.003
Identities = 14/99 (14%), Positives = 30/99 (30%), Gaps = 12/99 (12%)
Query: 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIA 108
++ P+G + R ++ D+ + S++
Sbjct: 230 NAICFFPNGNAFATGSDDA-TCRLFDLRADQELMTYSH-----------DNIICGITSVS 277
Query: 109 INPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCIS 147
+ +L+ G + WD +AG L N +S
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS 316
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 358 | |||
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.8 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.8 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.76 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.75 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.73 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.73 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.72 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.72 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.72 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.71 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.71 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.7 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.69 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.69 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.68 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.65 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.63 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.63 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.61 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.59 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.57 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.54 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.5 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.5 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.48 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.47 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.46 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.4 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.4 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.4 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.39 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.37 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.32 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.27 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.25 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.24 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.12 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.09 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.07 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.06 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.97 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.89 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.78 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.68 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.55 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.52 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.44 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.4 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.34 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.25 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.86 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.79 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.75 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.64 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.56 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.34 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.25 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.25 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 96.54 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.53 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.23 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.18 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 96.07 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.98 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 95.56 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 95.28 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 95.11 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 94.92 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 94.61 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 94.59 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 94.5 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 93.55 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 91.63 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 86.14 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 85.03 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 83.77 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 81.54 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 81.29 |
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.80 E-value=6.8e-19 Score=167.83 Aligned_cols=161 Identities=17% Similarity=0.140 Sum_probs=114.5
Q ss_pred eEEEEeecCCceeeee-eccC-cccCCCcccccceeEEEEee----CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGG-RYLLPTNDIRRRIELIQDFE----MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~-r~lk~d~~~~~rIeliqdfe----~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ 77 (358)
.|..+++.++.+..|. .... .............++..... ....+++++||||| + ++||+.|++|+|||+.+
T Consensus 137 ~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~-lasgs~Dg~i~iwd~~~ 214 (393)
T d1sq9a_ 137 HRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L-IATGFNNGTVQISELST 214 (393)
T ss_dssp EEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E-EEEECTTSEEEEEETTT
T ss_pred cEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-E-EEEEeCCCcEEEEeecc
Confidence 5778899999999998 2111 11111112222233333332 34568999999999 4 57899999999999987
Q ss_pred CceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC---eEEEEeCCCCceeEEEeC-------------
Q psy2085 78 LSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG---KVEAWDPRMKVKAGTLDC------------- 141 (358)
Q Consensus 78 lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG---tV~iWD~Rs~~~i~~L~~------------- 141 (358)
........... .-.+|+..|++|+|+|++++|++|+.|+ .|++||+++++++.+|..
T Consensus 215 ~~~~~~~~~~~-------~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~g 287 (393)
T d1sq9a_ 215 LRPLYNFESQH-------SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFA 287 (393)
T ss_dssp TEEEEEEECCC----------CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBS
T ss_pred ccccccccccc-------ccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeec
Confidence 54322111000 0123447899999999999999999987 499999999999988863
Q ss_pred CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 142 AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 142 ~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|...| ++|+|+|++++|+| .| +|||||+.+|+
T Consensus 288 H~~~V-----------------~~l~fspd~~~l~S~s~D~~v~vWd~~~g~ 322 (393)
T d1sq9a_ 288 HSSWV-----------------MSLSFNDSGETLCSAGWDGKLRFWDVKTKE 322 (393)
T ss_dssp BSSCE-----------------EEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred ccCce-----------------eeeccCCCCCeeEEECCCCEEEEEECCCCC
Confidence 33333 88999999999997 47 99999999998
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.80 E-value=1.9e-18 Score=156.32 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=112.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.++.+..|+-... ++++.|. |...|++|+|+|+|++| ++|+.++.|++||+.......
T Consensus 197 ~~~~~~~~d~~v~i~d~~~~-------------~~~~~~~~h~~~i~~v~~~p~~~~l-~s~s~d~~i~~~~~~~~~~~~ 262 (340)
T d1tbga_ 197 RLFVSGACDASAKLWDVREG-------------MCRQTFTGHESDINAICFFPNGNAF-ATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp SEEEEEETTTEEEEEETTTT-------------EEEEEECCCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEE
T ss_pred ceeEEeecCceEEEEECCCC-------------cEEEEEeCCCCCeEEEEECCCCCEE-EEEeCCCeEEEEeeccccccc
Confidence 46678888899999982221 3445554 67889999999999976 567889999999998653211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSD 162 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~ 162 (358)
... .......|++++|+|++.+|++|+.||+|++||+++++++.++.+|..+|
T Consensus 263 ~~~-----------~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V---------------- 315 (340)
T d1tbga_ 263 TYS-----------HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRV---------------- 315 (340)
T ss_dssp EEC-----------CTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCE----------------
T ss_pred ccc-----------cccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCE----------------
Confidence 110 11222679999999999999999999999999999999999999998887
Q ss_pred ceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 163 ESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 163 P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+|++.+|+| .| +|+|||
T Consensus 316 -~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 316 -SCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -EEEEEeCCCCEEEEEccCCEEEEeC
Confidence 88999999999996 47 999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.7e-17 Score=154.19 Aligned_cols=157 Identities=18% Similarity=0.151 Sum_probs=121.6
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
+|-+.++++.++..+. +.. . ..++...++.+.++.++|...|.||+|||||++| +||+ ++.|+|||+.+.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~--~-~~~~~~p~~~~~~~~~~H~~~V~~v~fs~~g~~l-atg~-dg~V~iWd~~~~~~~~ 86 (337)
T d1gxra_ 12 AYSFHVTADGQMQPVPFPPD--A-LIGPGIPRHARQINTLNHGEVVCAVTISNPTRHV-YTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp CCEEEECSSSCEEECCCCTT--S-SSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEE-EEEC-BSEEEEEETTSTTCCS
T ss_pred cccccCCCCCCEEeeccCCc--c-eecCCCCCCceEEEECCCCCcEEEEEECCCCCEE-EEEE-CCEEEEEEccCCcccc
Confidence 5788899998887776 322 2 2456677899999999999999999999999997 5676 7899999998643211
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEeCCCCccccccCCCccccccC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKV--KAGTLDCAFNCISNERDTEEKEGKAS 160 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~--~i~~L~~~~~~v~~~~~i~gl~GtRs 160 (358)
... ......+.+.|++|+|+|++++|++|+.||+|++||+.... ....+..+...+
T Consensus 87 ------~~~--~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v-------------- 144 (337)
T d1gxra_ 87 ------PVS--QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC-------------- 144 (337)
T ss_dssp ------CSE--EEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCE--------------
T ss_pred ------eeE--EeeecCCCCcEEEEEEcCCCCEEEEeecccccccccccccccccccccccccccc--------------
Confidence 000 11112334689999999999999999999999999987554 456677666655
Q ss_pred CCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 161 SDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 161 ~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+.|+|++..+++ .| .|++||..+++
T Consensus 145 ---~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~ 174 (337)
T d1gxra_ 145 ---YALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp ---EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ---cccccccccccccccccccccccccccccc
Confidence 77899999999986 46 99999999887
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.75 E-value=5.1e-17 Score=143.91 Aligned_cols=151 Identities=15% Similarity=0.138 Sum_probs=111.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+..+++.++.+..|+.... +.++.+. ++..+.+++|+|+|++| ++|+.++.|++|++.+.....
T Consensus 114 ~~~~~~~~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~d~~v~~~~~~~~~~~~ 179 (317)
T d1vyhc1 114 DHIVSASRDKTIKMWEVQTG-------------YCVKTFTGHREWVRMVRPNQDGTLI-ASCSNDQTVRVWVVATKECKA 179 (317)
T ss_dssp SEEEEEETTSEEEEEETTTC-------------CEEEEEECCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEE
T ss_pred ceEEeeccCcceeEeecccc-------------eeeeEEccCCCcceeeecccCCCEE-EEEeCCCeEEEEeeccceeeE
Confidence 46678888888888873221 1233333 66789999999999976 677889999999998654321
Q ss_pred eeeccCceEEEEEe------------------------------ec-------------------CCCCCeeEEEEcCCC
Q psy2085 83 ERCFDSEVVTFEIL------------------------------SD-------------------DYSSELNSIAINPVH 113 (358)
Q Consensus 83 ~r~~d~e~v~f~~L------------------------------S~-------------------D~s~~In~i~~np~~ 113 (358)
.-......+..... +. .+...|++++|+|++
T Consensus 180 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 259 (317)
T d1vyhc1 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG 259 (317)
T ss_dssp EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS
T ss_pred EEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCC
Confidence 11000000110000 11 122679999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|++|+.||+|++||+++++++.++.+|...| ++|+|+|++++|+| .| +|+|||
T Consensus 260 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V-----------------~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 260 KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV-----------------TSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SCEEEEETTTEEEEECCTTSCCCEEEECCSSCE-----------------EEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CEEEEEECCCeEEEEECCCCcEEEEEcCCCCCE-----------------EEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 999999999999999999999999999998887 88999999999997 47 999997
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.73 E-value=6.7e-17 Score=150.36 Aligned_cols=137 Identities=19% Similarity=0.238 Sum_probs=105.8
Q ss_pred ceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCc-e---EE-EEEeecCCCCCeeEEEE
Q psy2085 35 RIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSE-V---VT-FEILSDDYSSELNSIAI 109 (358)
Q Consensus 35 rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e-~---v~-f~~LS~D~s~~In~i~~ 109 (358)
.+++...++|.+.|+||+|||||++| |||+ |+.|+|||+.+..+......+.. . .. .....+.+...|++|+|
T Consensus 52 ~~~l~~~~~H~~~V~~l~fs~dg~~l-asg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 129 (388)
T d1erja_ 52 DVELHKSLDHTSVVCCVKFSNDGEYL-ATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF 129 (388)
T ss_dssp EEEEEEEEECSSCCCEEEECTTSSEE-EEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE
T ss_pred eeeeEeeCCCCCcEEEEEECCCCCEE-EEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEE
Confidence 35788889999999999999999986 6676 78999999987654322111100 0 00 01112233367999999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 110 NPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 110 np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
+|++++|++|+.||+|++||..+++.+..+.+|...+ ..+.|++++..+++ .| .|++||.
T Consensus 130 s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v-----------------~~~~~~~~~~~~~~~~~~~~i~~~d~ 192 (388)
T d1erja_ 130 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI-----------------YSLDYFPSGDKLVSGSGDRTVRIWDL 192 (388)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCCcceecccccccccccccccccccccccccccc-----------------cccccccccccccccccceeeeeeec
Confidence 9999999999999999999999999999999888777 78999999998886 35 9999999
Q ss_pred CCCc
Q psy2085 187 EIKK 190 (358)
Q Consensus 187 ~tG~ 190 (358)
.++.
T Consensus 193 ~~~~ 196 (388)
T d1erja_ 193 RTGQ 196 (388)
T ss_dssp TTTE
T ss_pred cccc
Confidence 9876
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.73 E-value=1.1e-16 Score=148.75 Aligned_cols=156 Identities=13% Similarity=0.131 Sum_probs=104.9
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEe-cCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGI-YKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~-~d~~IrvwDl~~lsl 80 (358)
.|..+++.|+++..|+ ...... +...+ .|...|.+++|+|||++|+++|. .+..++||++.+...
T Consensus 71 ~~latg~~dg~i~iwd~~~~~~~------------~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~ 138 (311)
T d1nr0a1 71 YYCASGDVHGNVRIWDTTQTTHI------------LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138 (311)
T ss_dssp SEEEEEETTSEEEEEESSSTTCC------------EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred CeEeccccCceEeeeeeeccccc------------cccccccccCccccccccccccccccccccccccccccccccccc
Confidence 6889999999999998 433211 11223 36788999999999999876653 245699999986433
Q ss_pred e--eeeeccCceEEEEEee-----------cCCC-------------------CCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 81 K--FERCFDSEVVTFEILS-----------DDYS-------------------SELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 81 k--~~r~~d~e~v~f~~LS-----------~D~s-------------------~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
. +..|. ..+....++ .|.. ..|++++|+|++++|++|+.||+|.+|
T Consensus 139 ~~~l~~h~--~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~ 216 (311)
T d1nr0a1 139 NGNLTGQA--RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 216 (311)
T ss_dssp CBCCCCCS--SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cccccccc--cccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccccccccc
Confidence 2 11111 111111111 1211 567777777777777777777777777
Q ss_pred eCCCCceeEEEeC-------CCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDC-------AFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~-------~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++++..+..+.. |...+ ++|+|+|++++|+| .| +|+|||..+|+
T Consensus 217 d~~~~~~~~~~~~~~~~~~~h~~~V-----------------~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 217 NGVDGTKTGVFEDDSLKNVAHSGSV-----------------FGLTWSPDGTKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp ETTTCCEEEECBCTTSSSCSSSSCE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ccccccccccccccccccccccccc-----------------cccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 7777776666542 22222 78999999999997 47 99999999988
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.72 E-value=2.5e-16 Score=142.20 Aligned_cols=137 Identities=9% Similarity=0.084 Sum_probs=106.6
Q ss_pred eeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC-------------
Q psy2085 36 IELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS------------- 101 (358)
Q Consensus 36 Ieliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s------------- 101 (358)
+.+.+.+. |.+.|++|+|+|||++| +||+.|++|+|||+.+......-..+...+....++++..
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~~~~~l-~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~ 123 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGTDSRLL-VSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEE-EEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred eeeeEEECCCCCCEEEEEECCCCCEE-EEEECCCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccceeec
Confidence 34555664 89999999999999987 6788999999999987643322111112222222233221
Q ss_pred -------------------------------------------------------------CCeeEEEEcCCCCEEEEEe
Q psy2085 102 -------------------------------------------------------------SELNSIAINPVHQLICVGT 120 (358)
Q Consensus 102 -------------------------------------------------------------~~In~i~~np~~~llasGs 120 (358)
..+.++.+.+.+.++++|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (340)
T d1tbga_ 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp EESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEee
Confidence 5688888999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.||+|++||+++++++.++.+|...+ ++|+|+|++++|++ .| +|++||..++.
T Consensus 204 ~d~~v~i~d~~~~~~~~~~~~h~~~i-----------------~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~ 259 (340)
T d1tbga_ 204 CDASAKLWDVREGMCRQTFTGHESDI-----------------NAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp TTTEEEEEETTTTEEEEEECCCSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cCceEEEEECCCCcEEEEEeCCCCCe-----------------EEEEECCCCCEEEEEeCCCeEEEEeecccc
Confidence 99999999999999999999888777 88999999999987 46 99999999876
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.72 E-value=2e-16 Score=149.24 Aligned_cols=168 Identities=11% Similarity=0.000 Sum_probs=106.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+...++.++.+..|+-.. ++.++++.|. |.+.|++|+|||||++| +||+.|++|+|||+.+...+..
T Consensus 21 ~la~~~~~~~i~iw~~~~-----------~~~~~~~~l~gH~~~V~~l~fsp~~~~l-~s~s~D~~i~vWd~~~~~~~~~ 88 (371)
T d1k8kc_ 21 QIAICPNNHEVHIYEKSG-----------NKWVQVHELKEHNGQVTGVDWAPDSNRI-VTCGTDRNAYVWTLKGRTWKPT 88 (371)
T ss_dssp EEEEECSSSEEEEEEEET-----------TEEEEEEEEECCSSCEEEEEEETTTTEE-EEEETTSCEEEEEEETTEEEEE
T ss_pred EEEEEeCCCEEEEEECCC-----------CCEEEEEEecCCCCCEEEEEECCCCCEE-EEEECCCeEEEEeecccccccc
Confidence 455677778888887322 3455666664 88899999999999987 5677899999999976543221
Q ss_pred eec--cCceEEEEEeecCCC---------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 84 RCF--DSEVVTFEILSDDYS---------------------------------SELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 84 r~~--d~e~v~f~~LS~D~s---------------------------------~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
... ....+....++|+.. ..|.+++|+|++.+||+|+.||+|++|
T Consensus 89 ~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~ 168 (371)
T d1k8kc_ 89 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 168 (371)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cccccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcEEEEE
Confidence 111 111122222222211 568888888888888888888888888
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccc------cCCCc-eeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGK------ASSDE-SSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~Gt------Rs~~P-~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|++.+............. ....|. .+... .+++|+|+|++|++ .| +|+|||..+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~ 234 (371)
T d1k8kc_ 169 SAYIKEVEERPAPTPWGS------KMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 234 (371)
T ss_dssp ECCCTTTSCCCCCBTTBS------CCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT
T ss_pred eeccCccccccccccccc------cccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeeccc
Confidence 876654221111000000 000000 00011 78999999999986 47 99999999887
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=2.2e-17 Score=153.71 Aligned_cols=164 Identities=16% Similarity=0.129 Sum_probs=109.2
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeE--EEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIEL--IQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIel--iqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|..+++.++.+..|+......+ .+++. .....|...|++++|+|+|++| ++|+.++.|++||+.+....
T Consensus 218 ~~l~~~~~d~~i~i~~~~~~~~~-------~~~~~~~~~~~~h~~~v~~l~~s~~~~~l-~s~~~d~~i~iwd~~~~~~~ 289 (388)
T d1erja_ 218 KYIAAGSLDRAVRVWDSETGFLV-------ERLDSENESGTGHKDSVYSVVFTRDGQSV-VSGSLDRSVKLWNLQNANNK 289 (388)
T ss_dssp CEEEEEETTSCEEEEETTTCCEE-------EEEC------CCCSSCEEEEEECTTSSEE-EEEETTSEEEEEEC------
T ss_pred CeEEEEcCCCeEEEeecccCccc-------eeeccccccccCCCCCEEEEEECCCCCEE-EEEECCCcEEEEeccCCccc
Confidence 47778889999999982221111 11111 1112367789999999999987 56788999999999864322
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCC
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASS 161 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~ 161 (358)
........ .........+...|.+++|+|++++|++|+.||+|++||+++++++.++.+|...+....-.
T Consensus 290 ~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~--------- 359 (388)
T d1erja_ 290 SDSKTPNS-GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA--------- 359 (388)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC---------
T ss_pred cccccccc-cceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEe---------
Confidence 11110000 01111223344789999999999999999999999999999999999999998876321000
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEECC
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTKE 187 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~~ 187 (358)
..+.|+|++.+|+| .| +|+|||++
T Consensus 360 --~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 360 --NGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp --SSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred --cCcccCCCCCEEEEEeCCCEEEEEeee
Confidence 23457889999997 47 99999975
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.71 E-value=2e-16 Score=147.11 Aligned_cols=129 Identities=17% Similarity=0.182 Sum_probs=101.1
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee---eeccCceEEEEEeecCCC------------------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE---RCFDSEVVTFEILSDDYS------------------ 101 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~---r~~d~e~v~f~~LS~D~s------------------ 101 (358)
+|...|++++|||||++| +||+.|++|+|||+.+....+. ......+.. ..+++|..
T Consensus 56 ~H~~~v~~~~~sp~g~~l-atg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~-v~~s~d~~~l~~~~~~~~~~~~v~~~ 133 (311)
T d1nr0a1 56 EHSHQTTVAKTSPSGYYC-ASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD-ISWDSESKRIAAVGEGRERFGHVFLF 133 (311)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSEEEEEESSSTTCCEEEEEECSSSCEEE-EEECTTSCEEEEEECCSSCSEEEEET
T ss_pred CCCCCEEEEEEeCCCCeE-eccccCceEeeeeeeccccccccccccccCcccc-cccccccccccccccccccccccccc
Confidence 477899999999999987 6888999999999987542211 111222222 11222211
Q ss_pred -------------CCeeEEEEcCCCC-EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeE
Q psy2085 102 -------------SELNSIAINPVHQ-LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEE 167 (358)
Q Consensus 102 -------------~~In~i~~np~~~-llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~ 167 (358)
..|++|+|+|+++ +|++|+.||+|++||+++++.+..+..|..++ .++.
T Consensus 134 ~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i-----------------~~v~ 196 (311)
T d1nr0a1 134 DTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV-----------------HSVR 196 (311)
T ss_dssp TTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE-----------------EEEE
T ss_pred ccccccccccccccccccccccccceeeecccccccccccccccccccccccccccccc-----------------cccc
Confidence 6799999999987 58999999999999999999999998887776 8899
Q ss_pred EcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 168 EEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 168 fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
|+|++++|++ .| .|+|||..++.
T Consensus 197 ~~p~~~~l~~~~~d~~v~~~d~~~~~ 222 (311)
T d1nr0a1 197 YNPDGSLFASTGGDGTIVLYNGVDGT 222 (311)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCcccccccccccccccccccccccc
Confidence 9999999987 47 99999999877
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=8.6e-17 Score=153.01 Aligned_cols=134 Identities=18% Similarity=0.139 Sum_probs=93.3
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCC---eEEEEEcCCCce
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKP---RVRCYETDNLSM 80 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~---~IrvwDl~~lsl 80 (358)
|..++|.|+++..|+-...+.+ ..++..+.+ .|...|++|+|||||++| ++|+.|+ .|+|||+.....
T Consensus 197 ~lasgs~Dg~i~iwd~~~~~~~-------~~~~~~~~l~~h~~~V~~l~~spdg~~l-~sgs~D~t~~~i~lwd~~~g~~ 268 (393)
T d1sq9a_ 197 LIATGFNNGTVQISELSTLRPL-------YNFESQHSMINNSNSIRSVKFSPQGSLL-AIAHDSNSFGCITLYETEFGER 268 (393)
T ss_dssp EEEEECTTSEEEEEETTTTEEE-------EEEECCC---CCCCCEEEEEECSSTTEE-EEEEEETTEEEEEEEETTTCCE
T ss_pred EEEEEeCCCcEEEEeecccccc-------cccccccccccccceEEEccccccccee-eeecCCCCcceeeeccccccee
Confidence 6789999999999983222111 112222222 377899999999999987 5566665 599999987643
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCI 146 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v 146 (358)
...-............-..|++.|++|+|+|++++|+|||.||+|++||+++++++.+|.+|...+
T Consensus 269 ~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 269 IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334 (393)
T ss_dssp EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred eeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcc
Confidence 321111111111111123455789999999999999999999999999999999999999998766
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=4.5e-16 Score=144.41 Aligned_cols=136 Identities=10% Similarity=0.096 Sum_probs=107.8
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
+.+.++.++.+..|+-... +.++.+.++..|.+++|+|+|++| ++|+.++.|++||+........
T Consensus 197 ~~~~~~~d~~v~i~d~~~~-------------~~~~~~~~~~~i~~l~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~- 261 (337)
T d1gxra_ 197 KLWTGGLDNTVRSWDLREG-------------RQLQQHDFTSQIFSLGYCPTGEWL-AVGMESSNVEVLHVNKPDKYQL- 261 (337)
T ss_dssp EEEEEETTSEEEEEETTTT-------------EEEEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEETTSSCEEEE-
T ss_pred ccccccccccccccccccc-------------eeecccccccceEEEEEccccccc-ceeccccccccccccccccccc-
Confidence 4556666777777762221 356678899999999999999987 5677899999999986532111
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCce
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDES 164 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~ 164 (358)
..+...|++|+|+|++++|++|+.||+|++||..+++++..+.. ...+ .
T Consensus 262 -------------~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v-----------------~ 310 (337)
T d1gxra_ 262 -------------HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE-SSSV-----------------L 310 (337)
T ss_dssp -------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSCE-----------------E
T ss_pred -------------cccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccC-CCCE-----------------E
Confidence 11226799999999999999999999999999999999888764 4444 7
Q ss_pred eeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 165 SEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 165 sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
+++|+|++++|+| .| +|+|||+
T Consensus 311 ~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 311 SCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 8999999999986 47 9999996
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.69 E-value=2.5e-16 Score=140.51 Aligned_cols=64 Identities=9% Similarity=0.132 Sum_probs=53.7
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCC
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDN 77 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ 77 (358)
.|..++|.|+++..|+ +... ...++++.+.|...|.+++|+|++..++++|+.|++|++|++..
T Consensus 24 ~~L~s~s~Dg~v~iwd~~~~~----------~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~ 88 (342)
T d1yfqa_ 24 SLLLITSWDGSLTVYKFDIQA----------KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp TEEEEEETTSEEEEEEEETTT----------TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CEEEEEECCCeEEEEEccCCC----------cceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccc
Confidence 5788999999999998 4332 23467778889999999999998877788999999999999874
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.69 E-value=9e-16 Score=135.71 Aligned_cols=130 Identities=11% Similarity=0.117 Sum_probs=103.4
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCC---------------------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYS--------------------- 101 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s--------------------- 101 (358)
.|.+.|++|+|+|+|++| +||+.|++|+|||+.+..+...-..+...|.....+++..
T Consensus 15 GH~~~I~~l~~sp~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (317)
T d1vyhc1 15 GHRSPVTRVIFHPVFSVM-VSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 93 (317)
T ss_dssp CCSSCEEEEEECSSSSEE-EEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred CCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccccc
Confidence 378899999999999976 6788999999999987543322111122233333333322
Q ss_pred --------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC
Q psy2085 102 --------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE 173 (358)
Q Consensus 102 --------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~ 173 (358)
..+.++.++|++..+++++.||++++||+++++.+.++.++...+ ..++|+|++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~ 156 (317)
T d1vyhc1 94 IRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV-----------------RMVRPNQDGT 156 (317)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCE-----------------EEEEECTTSS
T ss_pred ccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcc-----------------eeeecccCCC
Confidence 678999999999999999999999999999999999999887665 7899999999
Q ss_pred EEEE--ec-ceEEEECCCCc
Q psy2085 174 EEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 174 ~llS--aD-~IKIWD~~tG~ 190 (358)
+|++ .| .|++||..+++
T Consensus 157 ~l~~~~~d~~v~~~~~~~~~ 176 (317)
T d1vyhc1 157 LIASCSNDQTVRVWVVATKE 176 (317)
T ss_dssp EEEEEETTSCEEEEETTTCC
T ss_pred EEEEEeCCCeEEEEeeccce
Confidence 9987 46 99999999877
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.68 E-value=1.5e-15 Score=141.02 Aligned_cols=164 Identities=12% Similarity=0.083 Sum_probs=112.4
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEe-cCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGI-YKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~-~d~~IrvwDl~~lsl 80 (358)
.|..+++.|+++..|+ ...+. +.. ....+...+ .+.+.|.+++|+|||++|+++|. .+..+++|++.+...
T Consensus 78 ~~lasgs~Dg~i~iWd~~~~~~-~~~-----~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~ 151 (325)
T d1pgua1 78 QYLCSGDESGKVIVWGWTFDKE-SNS-----VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNS 151 (325)
T ss_dssp CEEEEEETTSEEEEEEEEEEGG-GTE-----EEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCE
T ss_pred CEEEEEeCCCCEEEeeecCCcc-eee-----eecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeeccccc
Confidence 5889999999999999 32221 110 001112222 36678999999999999876653 467899999875432
Q ss_pred eeeeeccCceEEEEEe-----------ecCCC----------------------CCeeEEEEcCC-CCEEEEEeCCCeEE
Q psy2085 81 KFERCFDSEVVTFEIL-----------SDDYS----------------------SELNSIAINPV-HQLICVGTIEGKVE 126 (358)
Q Consensus 81 k~~r~~d~e~v~f~~L-----------S~D~s----------------------~~In~i~~np~-~~llasGs~DGtV~ 126 (358)
......+...+..+.+ +.|.. ..|++++|+|+ +.+|++|+.||+|+
T Consensus 152 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~ 231 (325)
T d1pgua1 152 LGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 231 (325)
T ss_dssp EEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred ceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccccccee
Confidence 1110000111111111 12211 56999999997 67999999999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc---CCCCEEEE--ec-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE---EEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs---~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
+||+++++.+.+|.+|..++ ..+.|+ |+|++|+| .| +|+|||+.+|+
T Consensus 232 iwd~~~~~~~~~l~~~~~~v-----------------~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~ 284 (325)
T d1pgua1 232 CFDGKSGEFLKYIEDDQEPV-----------------QGGIFALSWLDSQKFATVGADATIRVWDVTTSK 284 (325)
T ss_dssp EEETTTCCEEEECCBTTBCC-----------------CSCEEEEEESSSSEEEEEETTSEEEEEETTTTE
T ss_pred eeeecccccccccccccccc-----------------ccceeeeeccCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999999998877665 344454 67888886 57 99999999988
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.65 E-value=3.2e-15 Score=134.67 Aligned_cols=130 Identities=10% Similarity=0.010 Sum_probs=94.2
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-eeeeccCceEEEEEeecCCC--------------------
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK-FERCFDSEVVTFEILSDDYS-------------------- 101 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk-~~r~~d~e~v~f~~LS~D~s-------------------- 101 (358)
.|...|++|+|||||++| +||+.|++|+|||+.+.... .....+...+....++++..
T Consensus 10 GH~~~V~~l~~s~dg~~l-~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~ 88 (299)
T d1nr0a2 10 GHNKAITALSSSADGKTL-FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGV 88 (299)
T ss_dssp CCSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSS
T ss_pred CCCCCcEEEEECCCCCEE-EEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEeccCCccc
Confidence 488999999999999987 67889999999999864322 11111112222222233221
Q ss_pred ------------------------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy2085 102 ------------------------------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMK 133 (358)
Q Consensus 102 ------------------------------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~ 133 (358)
..+.+++|+|++++|++|+.||.|++||++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~ 168 (299)
T d1nr0a2 89 DSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGA 168 (299)
T ss_dssp CTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46788889999999999999999999998877
Q ss_pred ceeEE-EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 134 VKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 134 ~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
..... ...|...+ .+++|+|++.+|+++ | .|++||..++.
T Consensus 169 ~~~~~~~~~~~~~i-----------------~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~ 212 (299)
T d1nr0a2 169 SVSEVKTIVHPAEI-----------------TSVAFSNNGAFLVATDQSRKVIPYSVANNF 212 (299)
T ss_dssp EEEEEEEEECSSCE-----------------EEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred cccccccccccccc-----------------cccccccccccccccccccccccccccccc
Confidence 65432 23344444 789999999999874 5 99999998876
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.63 E-value=2.6e-14 Score=127.28 Aligned_cols=63 Identities=14% Similarity=0.198 Sum_probs=51.0
Q ss_pred eEEEE-eecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 4 EYCYQ-TNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 4 ~~~~~-~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
.|+|= .+.+.++..|+.... ++++.+........++|||||++|++++..+++|++||+.+..
T Consensus 2 ~~~yV~~~~~~~v~v~D~~t~-------------~~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~ 65 (301)
T d1l0qa2 2 TFAYIANSESDNISVIDVTSN-------------KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65 (301)
T ss_dssp EEEEEEETTTTEEEEEETTTT-------------EEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred eEEEEEECCCCEEEEEECCCC-------------eEEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 58884 467788999984333 4667777777789999999999998888888999999998754
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.63 E-value=8.4e-15 Score=131.88 Aligned_cols=142 Identities=14% Similarity=0.155 Sum_probs=99.1
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER 84 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r 84 (358)
+.+.++.++.+..|+-... .+..+....|+..|++++|+|+|++| ++|+.++.|++||+.+.....
T Consensus 150 ~l~~g~~dg~i~~~d~~~~-----------~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~~~~~~~~~~-- 215 (299)
T d1nr0a2 150 FVAVGGQDSKVHVYKLSGA-----------SVSEVKTIVHPAEITSVAFSNNGAFL-VATDQSRKVIPYSVANNFELA-- 215 (299)
T ss_dssp EEEEEETTSEEEEEEEETT-----------EEEEEEEEECSSCEEEEEECTTSSEE-EEEETTSCEEEEEGGGTTEES--
T ss_pred ccccccccccccccccccc-----------cccccccccccccccccccccccccc-ccccccccccccccccccccc--
Confidence 5667777888888872211 12334445688899999999999987 567789999999987542210
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCC---CccccccCCCccccccCC
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAF---NCISNERDTEEKEGKASS 161 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~---~~v~~~~~i~gl~GtRs~ 161 (358)
.... -..+...|++++|+|++.+|++|+.||+|++||++++.....+.... ..+
T Consensus 216 ~~~~--------~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v--------------- 272 (299)
T d1nr0a2 216 HTNS--------WTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSV--------------- 272 (299)
T ss_dssp CCCC--------CCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCE---------------
T ss_pred cccc--------ccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcE---------------
Confidence 0000 01123679999999999999999999999999999876544443221 122
Q ss_pred CceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 162 DESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 162 ~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
..+.| +++.+|+| .| +|||||+
T Consensus 273 --~~~~~-~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 273 --NSVIW-LNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp --EEEEE-EETTEEEEEETTSCEEEEEC
T ss_pred --EEEEE-CCCCEEEEEeCCCEEEEEec
Confidence 44544 55678886 47 9999997
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.61 E-value=7.6e-15 Score=131.66 Aligned_cols=112 Identities=17% Similarity=0.271 Sum_probs=87.1
Q ss_pred CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCC----------C
Q psy2085 44 MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPV----------H 113 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~----------~ 113 (358)
+.+.+++++|+|||++| ++|+.++.|++||+.+......+ -..++..|++++|+|. .
T Consensus 161 ~~~~v~~~~~s~~~~~l-~~g~~dg~i~i~d~~~~~~~~~~------------~~~h~~~v~~~~~~p~~~~~~~~~~~~ 227 (287)
T d1pgua2 161 LRAKPSYISISPSETYI-AAGDVMGKILLYDLQSREVKTSR------------WAFRTSKINAISWKPAEKGANEEEIEE 227 (287)
T ss_dssp CSSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEEEECC------------SCCCSSCEEEEEECCCC------CCSC
T ss_pred cCCceeEEEeccCcccc-ccccccccccceeeccccccccc------------ccccccccceeeecccccccccccCCC
Confidence 55679999999999987 57788999999999875432110 0112256888888874 4
Q ss_pred CEEEEEeCCCeEEEEeCCC-CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEEC
Q psy2085 114 QLICVGTIEGKVEAWDPRM-KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs-~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~ 186 (358)
.+||+|+.||+|++||+++ +..+..+.+|...+ ++|.|+|++. |+| .| +|||||+
T Consensus 228 ~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V-----------------~~v~~~~~~~-l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGV-----------------NNLLWETPST-LVSSGADACIKRWNV 286 (287)
T ss_dssp CEEEEEETTSCEEEEESSCTTCCEEETTSSTTCE-----------------EEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred CeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCe-----------------EEEEECCCCE-EEEEECCCeEEEEEE
Confidence 5899999999999999977 45677778888777 8899999874 665 57 9999995
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.59 E-value=3.4e-14 Score=133.73 Aligned_cols=155 Identities=10% Similarity=0.010 Sum_probs=111.5
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee-
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK- 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk- 81 (358)
.|..++|.|+++..|+-... ..+....+ .+...+.+++|+|||++| ++|+.++.|++|++......
T Consensus 64 ~~l~s~s~D~~i~vWd~~~~-----------~~~~~~~~~~~~~~v~~i~~~p~~~~l-~~~s~d~~i~i~~~~~~~~~~ 131 (371)
T d1k8kc_ 64 NRIVTCGTDRNAYVWTLKGR-----------TWKPTLVILRINRAARCVRWAPNEKKF-AVGSGSRVISICYFEQENDWW 131 (371)
T ss_dssp TEEEEEETTSCEEEEEEETT-----------EEEEEEECCCCSSCEEEEEECTTSSEE-EEEETTSSEEEEEEETTTTEE
T ss_pred CEEEEEECCCeEEEEeeccc-----------ccccccccccccccccccccccccccc-eeecccCcceeeeeecccccc
Confidence 57889999999999983211 12223333 356789999999999987 56778999999998754321
Q ss_pred -ee---eeccCceEEEEEeecC----------C-------------------------------------CCCeeEEEEc
Q psy2085 82 -FE---RCFDSEVVTFEILSDD----------Y-------------------------------------SSELNSIAIN 110 (358)
Q Consensus 82 -~~---r~~d~e~v~f~~LS~D----------~-------------------------------------s~~In~i~~n 110 (358)
+. +.+...+ ....++|+ . ...|++++|+
T Consensus 132 ~~~~~~~~~~~~v-~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 210 (371)
T d1k8kc_ 132 VCKHIKKPIRSTV-LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS 210 (371)
T ss_dssp EEEEECTTCCSCE-EEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred ccccccccccccc-ccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEee
Confidence 11 1111111 11111221 1 1568999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 111 PVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 111 p~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
|++++|++|+.||+|++||++++.++..+..|..++ .+|.|+|++.+|++ .| .+++|+...
T Consensus 211 ~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v-----------------~s~~fs~d~~~la~g~d~~~~~~~~~~ 273 (371)
T d1k8kc_ 211 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPL-----------------LAVTFITESSLVAAGHDCFPVLFTYDS 273 (371)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCE-----------------EEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred cccccccccccCCcceEEeeecccceeeeecccccc-----------------eeeeecCCCCEEEEEcCCceEEEEeeC
Confidence 999999999999999999999999999999888777 88999999988887 47 666655443
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.57 E-value=1.8e-13 Score=122.87 Aligned_cols=153 Identities=12% Similarity=0.086 Sum_probs=105.1
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..++|.|+++..|+-... ++++.|. |.+.|++|+|+|++ +| +||+.|++|++|++.......
T Consensus 24 ~~l~tgs~Dg~i~vWd~~~~-------------~~~~~l~~H~~~V~~l~~s~~~-~l-~s~s~D~~i~iw~~~~~~~~~ 88 (355)
T d1nexb2 24 NYVITGADDKMIRVYDSINK-------------KFLLQLSGHDGGVWALKYAHGG-IL-VSGSTDRTVRVWDIKKGCCTH 88 (355)
T ss_dssp TEEEEEETTTEEEEEETTTT-------------EEEEEEECCSSCEEEEEEETTT-EE-EEEETTCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEECCCCCEEEEEEcCCC-EE-EEEeccccccccccccccccc
Confidence 58899999999999983222 3455665 78899999999976 44 678899999999987653221
Q ss_pred eeeccCc------------eEEEEEeecCCC-------------------------------------------------
Q psy2085 83 ERCFDSE------------VVTFEILSDDYS------------------------------------------------- 101 (358)
Q Consensus 83 ~r~~d~e------------~v~f~~LS~D~s------------------------------------------------- 101 (358)
....... ...+...+.|.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 168 (355)
T d1nexb2 89 VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168 (355)
T ss_dssp EECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEE
T ss_pred ccccccccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccccccccc
Confidence 1100000 000011111110
Q ss_pred ---------------------------------CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 102 ---------------------------------SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 102 ---------------------------------~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
..+.++.++|.+.++++|+.||+|++||.+++..+..+.+|...+
T Consensus 169 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v-- 246 (355)
T d1nexb2 169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV-- 246 (355)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCC--
T ss_pred cccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccccccccccccccccc--
Confidence 456677778888888888888888888888888888887777665
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.++.|++ ++|++ .| +|+|||..++.
T Consensus 247 ---------------~~~~~~~--~~l~~~~~dg~i~iwd~~~~~ 274 (355)
T d1nexb2 247 ---------------GLLRLSD--KFLVSAAADGSIRGWDANDYS 274 (355)
T ss_dssp ---------------CEEEECS--SEEEEECTTSEEEEEETTTCC
T ss_pred ---------------ccccccc--ceeeeeecccccccccccccc
Confidence 6788864 56776 46 99999998876
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.54 E-value=1.5e-14 Score=128.76 Aligned_cols=128 Identities=13% Similarity=0.057 Sum_probs=91.7
Q ss_pred eeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCC-
Q psy2085 36 IELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVH- 113 (358)
Q Consensus 36 Ieliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~- 113 (358)
++++|-.+ |...|++|+|||||++| +||+.|++|+|||+........ +. ....+.+.|.+|+|+|++
T Consensus 1 ~~~v~~~~~h~d~I~~l~fsp~~~~L-~s~s~Dg~v~iwd~~~~~~~~~---------~~-~~~~h~~~V~~v~f~~~~~ 69 (342)
T d1yfqa_ 1 MQIVQIEQAPKDYISDIKIIPSKSLL-LITSWDGSLTVYKFDIQAKNVD---------LL-QSLRYKHPLLCCNFIDNTD 69 (342)
T ss_dssp CEEEECSSCCSSCEEEEEEEGGGTEE-EEEETTSEEEEEEEETTTTEEE---------EE-EEEECSSCEEEEEEEESSS
T ss_pred CCeEEcCCCCCCCEEEEEEeCCCCEE-EEEECCCeEEEEEccCCCcceE---------EE-EecCCCCCEEEEEEeCCCC
Confidence 35666444 66789999999999987 6788999999999975432211 00 001233789999999874
Q ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 114 QLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 114 ~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
.+|++|+.||+|.+||+..+........+..... ....+.+++..+++ .| ++++||.+++.
T Consensus 70 ~~l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~ 133 (342)
T d1yfqa_ 70 LQIYVGTVQGEILKVDLIGSPSFQALTNNEANLG----------------ICRICKYGDDKLIAASWDGLIEVIDPRNYG 133 (342)
T ss_dssp EEEEEEETTSCEEEECSSSSSSEEECBSCCCCSC----------------EEEEEEETTTEEEEEETTSEEEEECHHHHT
T ss_pred CEEEEcccccceeeeecccccccccccccccccc----------------cccccccccccccccccccccceeeccccc
Confidence 5899999999999999998887766654433221 33455666677775 56 99999986544
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=6.1e-13 Score=118.71 Aligned_cols=139 Identities=8% Similarity=0.105 Sum_probs=95.8
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..+++.|+.+..|+.... ++++.+. +...+.++.+++ ++| ++|+.++.|+|||+.......
T Consensus 188 ~~l~s~~~dg~i~~~d~~~~-------------~~~~~~~~~~~~v~~~~~~~--~~l-~s~s~d~~i~iwd~~~~~~~~ 251 (342)
T d2ovrb2 188 IHVVSGSLDTSIRVWDVETG-------------NCIHTLTGHQSLTSGMELKD--NIL-VSGNADSTVKIWDIKTGQCLQ 251 (342)
T ss_dssp SEEEEEETTSCEEEEETTTC-------------CEEEEECCCCSCEEEEEEET--TEE-EEEETTSCEEEEETTTCCEEE
T ss_pred CEEEEEeCCCeEEEeecccc-------------eeeeEecccccceeEEecCC--CEE-EEEcCCCEEEEEecccccccc
Confidence 46677888888888872221 2333343 566777776655 555 678889999999998653221
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeC-----CCCccccccCCCcccc
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDC-----AFNCISNERDTEEKEG 157 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~-----~~~~v~~~~~i~gl~G 157 (358)
. ... ...+...+.+++++ +.++++|+.||+|++||+++++.+.++.. |...|
T Consensus 252 ~--~~~--------~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v----------- 308 (342)
T d2ovrb2 252 T--LQG--------PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVV----------- 308 (342)
T ss_dssp E--ECS--------TTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEE-----------
T ss_pred c--ccc--------cceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCE-----------
Confidence 1 100 01122456666665 47999999999999999999999988853 22333
Q ss_pred ccCCCceeeEEcCCCCEEEEe--c-----ceEEEECC
Q psy2085 158 KASSDESSEEEEEEEEEEESS--D-----DDQAWTKE 187 (358)
Q Consensus 158 tRs~~P~sI~fs~d~~~llSa--D-----~IKIWD~~ 187 (358)
.+|+|+|++..|+++ | .|++||.+
T Consensus 309 ------~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 309 ------WRIRASNTKLVCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp ------EEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred ------EEEEECCCCCEEEEEeCCCCCeeEEEEEeCC
Confidence 789999999888863 3 39999986
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.50 E-value=3e-13 Score=125.22 Aligned_cols=144 Identities=9% Similarity=0.032 Sum_probs=93.7
Q ss_pred EEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 6 CYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+.+++.|+.+..|. +..+ ....+..+ .+...|.+++|+||+..++++|+.|+.|+|||+.+....
T Consensus 175 ~~~~~~d~~v~~~d~~~~~-----------~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~-- 241 (325)
T d1pgua1 175 SMTVGDDGSVVFYQGPPFK-----------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL-- 241 (325)
T ss_dssp EEEEETTTEEEEEETTTBE-----------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE--
T ss_pred EEEeecccccccccccccc-----------cceecccccCCCCccEEeeeccccceeccccccccceeeeeecccccc--
Confidence 56677778888887 2111 00111112 356779999999986555678889999999999875432
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+.+..+. ......+.++++ |++++|++|+.||+|++||+++++++..+..+.+.+..
T Consensus 242 ~~l~~~~-------~~v~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~--------------- 298 (325)
T d1pgua1 242 KYIEDDQ-------EPVQGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN--------------- 298 (325)
T ss_dssp EECCBTT-------BCCCSCEEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGG---------------
T ss_pred ccccccc-------cccccceeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccC---------------
Confidence 1111000 000123445554 67889999999999999999999999998876654321
Q ss_pred eee--EEcCCCCEEEE--ec-ceEEEEC
Q psy2085 164 SSE--EEEEEEEEEES--SD-DDQAWTK 186 (358)
Q Consensus 164 ~sI--~fs~d~~~llS--aD-~IKIWD~ 186 (358)
..+ .|++++ .|+| .| +|+|||+
T Consensus 299 ~~~~~~~~~~~-~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 299 QQVGVVATGNG-RIISLSLDGTLNFYEL 325 (325)
T ss_dssp CEEEEEEEETT-EEEEEETTSCEEEEET
T ss_pred eEEEEEECCCC-EEEEEECCCEEEEEEC
Confidence 334 444443 6665 47 9999996
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.48 E-value=5.4e-13 Score=121.40 Aligned_cols=118 Identities=9% Similarity=-0.040 Sum_probs=96.6
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCC-eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKP-RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT 120 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~-~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs 120 (358)
+.|+..|.+++|||||++|+.+|..++ .|++||+.+..++.. . .+...|++++|+|++..|++++
T Consensus 39 ~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~~~--~------------~~~~~v~~~~~spdg~~l~~~~ 104 (360)
T d1k32a3 39 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKF--E------------ENLGNVFAMGVDRNGKFAVVAN 104 (360)
T ss_dssp CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEEC--C------------CCCCSEEEEEECTTSSEEEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEEEe--e------------CCCceEEeeeecccccccceec
Confidence 357889999999999999987776654 799999987543211 1 1226799999999999999999
Q ss_pred CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe------------c-ceEEEECC
Q psy2085 121 IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS------------D-DDQAWTKE 187 (358)
Q Consensus 121 ~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa------------D-~IKIWD~~ 187 (358)
.++.+.+||+.+++....+..+...+ .+++|+|+|++|+.+ + .+++||..
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~ 167 (360)
T d1k32a3 105 DRFEIMTVDLETGKPTVIERSREAMI-----------------TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 167 (360)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSSCC-----------------CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred cccccccccccccceeeeeecccccc-----------------cchhhccceeeeeeeccccccceeeccccceeeeccc
Confidence 99999999999999888888776554 679999999998731 3 68999999
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+++
T Consensus 168 ~~~ 170 (360)
T d1k32a3 168 GRK 170 (360)
T ss_dssp TTE
T ss_pred cCc
Confidence 887
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.5e-12 Score=114.64 Aligned_cols=152 Identities=11% Similarity=0.093 Sum_probs=100.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..++|.|+++..|+-... ++++.|. |...|.+++|+|+ + +++|+.|+.+++|+........
T Consensus 28 ~~l~sgs~Dg~i~vWd~~~~-------------~~~~~~~~h~~~V~~v~~~~~--~-l~s~s~D~~~~~~~~~~~~~~~ 91 (342)
T d2ovrb2 28 NRIVSGSDDNTLKVWSAVTG-------------KCLRTLVGHTGGVWSSQMRDN--I-IISGSTDRTLKVWNAETGECIH 91 (342)
T ss_dssp TEEEEEETTSCEEEEETTTC-------------CEEEECCCCSSCEEEEEEETT--E-EEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------CEEEEEeCCCCCEEEEEeCCC--c-cccceeccccccccccccccee
Confidence 57889999999999983222 2445554 7789999999986 4 5778899999999987643322
Q ss_pred eeeccCceEEEEE------------------------------------------------eecCCC-------------
Q psy2085 83 ERCFDSEVVTFEI------------------------------------------------LSDDYS------------- 101 (358)
Q Consensus 83 ~r~~d~e~v~f~~------------------------------------------------LS~D~s------------- 101 (358)
........+.... .+.|..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 171 (342)
T d2ovrb2 92 TLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLH 171 (342)
T ss_dssp EECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEE
T ss_pred cccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeEEEeecccceeeE
Confidence 1111111110000 000000
Q ss_pred ----CCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 102 ----SELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 102 ----~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.....+.+++++..|++|+.||+|++||+++++++..+.+|...+ ..+.|+ +++|++
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v-----------------~~~~~~--~~~l~s 232 (342)
T d2ovrb2 172 TLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT-----------------SGMELK--DNILVS 232 (342)
T ss_dssp EECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE-----------------EEEEEE--TTEEEE
T ss_pred EEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccce-----------------eEEecC--CCEEEE
Confidence 233444555667788888888888888888888888777776554 556665 467886
Q ss_pred --ec-ceEEEECCCCc
Q psy2085 178 --SD-DDQAWTKEIKK 190 (358)
Q Consensus 178 --aD-~IKIWD~~tG~ 190 (358)
.| .|+|||..+++
T Consensus 233 ~s~d~~i~iwd~~~~~ 248 (342)
T d2ovrb2 233 GNADSTVKIWDIKTGQ 248 (342)
T ss_dssp EETTSCEEEEETTTCC
T ss_pred EcCCCEEEEEeccccc
Confidence 57 99999998877
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.46 E-value=2.2e-12 Score=115.88 Aligned_cols=148 Identities=8% Similarity=0.006 Sum_probs=113.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeC---CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCce
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEM---PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSM 80 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~---~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lsl 80 (358)
+|.++++.+.++..|+-... +++..+.- ...+..++|||||++|+++|+.++.|.+||+.+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~-------------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~ 68 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM-------------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT-------------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE
T ss_pred eEEEEEcCCCEEEEEECCCC-------------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcE
Confidence 79999999999999993322 35555543 345679999999999988888899999999998654
Q ss_pred eeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCceeEEEeCCCCcccc
Q psy2085 81 KFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT------------IEGKVEAWDPRMKVKAGTLDCAFNCISN 148 (358)
Q Consensus 81 k~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~ 148 (358)
............. ..+..++|+|++..+++++ .++.+.+||..++..+..+..+..+
T Consensus 69 ~~~~~~~~~~~~~--------~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~--- 137 (337)
T d1pbyb_ 69 LGRIDLSTPEERV--------KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI--- 137 (337)
T ss_dssp EEEEECCBTTEEE--------ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC---
T ss_pred EEEEecCCCcccc--------cceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCc---
Confidence 3222221111110 3466899999999887775 4678999999999988888765443
Q ss_pred ccCCCccccccCCCceeeEEcCCCCEEEEec-ceEEEECCCCc
Q psy2085 149 ERDTEEKEGKASSDESSEEEEEEEEEEESSD-DDQAWTKEIKK 190 (358)
Q Consensus 149 ~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD-~IKIWD~~tG~ 190 (358)
..+.|+|+|.++++++ .+.+||..+++
T Consensus 138 ---------------~~~~~s~dg~~l~~~~~~~~~~d~~~~~ 165 (337)
T d1pbyb_ 138 ---------------TMLAWARDGSKLYGLGRDLHVMDPEAGT 165 (337)
T ss_dssp ---------------CCEEECTTSSCEEEESSSEEEEETTTTE
T ss_pred ---------------eEEEEcCCCCEEEEEcCCcceeeeecCc
Confidence 6799999999999988 88999999887
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.40 E-value=2.6e-12 Score=123.42 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=45.0
Q ss_pred EEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 7 YQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
-+.+.+.++..|+-... +++..|.....+..|+|||||++|+ +++.++.|++||+.+..
T Consensus 36 V~~~~dg~v~vwD~~t~-------------~~~~~l~~g~~~~~vafSPDGk~l~-~~~~d~~v~vwd~~t~~ 94 (426)
T d1hzua2 36 VTLRDAGQIALVDGDSK-------------KIVKVIDTGYAVHISRMSASGRYLL-VIGRDARIDMIDLWAKE 94 (426)
T ss_dssp EEETTTTEEEEEETTTC-------------SEEEEEECCSSEEEEEECTTSCEEE-EEETTSEEEEEETTSSS
T ss_pred EEEcCCCEEEEEECCCC-------------cEEEEEeCCCCeeEEEECCCCCEEE-EEeCCCCEEEEEccCCc
Confidence 45667888999983333 3566677667899999999999985 45678999999997643
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.40 E-value=1.2e-11 Score=110.62 Aligned_cols=139 Identities=7% Similarity=0.103 Sum_probs=97.5
Q ss_pred EEEEeecCCceeeeeeccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeee
Q psy2085 5 YCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFE 83 (358)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~ 83 (358)
+...++.+..+..|+.... +.++.+ .+...+.++.|+|++.++ ++|+.+++|++||+.+......
T Consensus 173 ~~~~~~~d~~i~~~d~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~i~i~d~~~~~~~~~ 238 (355)
T d1nexb2 173 IVVSGSYDNTLIVWDVAQM-------------KCLYILSGHTDRIYSTIYDHERKRC-ISASMDTTIRIWDLENGELMYT 238 (355)
T ss_dssp EEEEEETTSCEEEEETTTT-------------EEEEEECCCSSCEEEEEEETTTTEE-EEEETTSCEEEEETTTCCEEEE
T ss_pred eeeeecccceeeeeecccc-------------cceeeeeccccccccccccccceee-ecccccceEEeeeccccccccc
Confidence 4556666777777772221 123333 255678999999999987 5677899999999987543211
Q ss_pred eeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 84 RCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 84 r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
. ..+...|++++++| ++|++|+.||+|++||+++..... ..|...+.
T Consensus 239 --~-----------~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~---------------- 285 (355)
T d1nexb2 239 --L-----------QGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYSRKF--SYHHTNLS---------------- 285 (355)
T ss_dssp --E-----------CCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTCCEEE--EEECTTCC----------------
T ss_pred --c-----------cccccccccccccc--ceeeeeecccccccccccccceec--ccccCCce----------------
Confidence 1 12336789999975 689999999999999998876543 33333321
Q ss_pred eeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
....|++++.+|++ +| +|+|||+++|+
T Consensus 286 ~~~~~~~~~~~l~~g~d~~i~vwd~~tg~ 314 (355)
T d1nexb2 286 AITTFYVSDNILVSGSENQFNIYNLRSGK 314 (355)
T ss_dssp CCCEEEECSSEEEEEETTEEEEEETTTCC
T ss_pred EEEEEcCCCCEEEEEeCCEEEEEECCCCC
Confidence 22457788887776 67 99999999987
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.40 E-value=1.5e-11 Score=110.72 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=51.8
Q ss_pred ceEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCC--CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc
Q psy2085 3 VEYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMP--GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS 79 (358)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~--~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls 79 (358)
-+|.++++.+.++..|+-... ++++.+.++ ....+++|||||+++++++..+++|.+||+.+..
T Consensus 8 ~~~l~~~~~~~~v~v~D~~t~-------------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 8 HEYMIVTNYPNNLHVVDVASD-------------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CEEEEEEETTTEEEEEETTTT-------------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CcEEEEEcCCCEEEEEECCCC-------------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 479999999999999994333 355655544 3567999999999999999899999999998653
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=1.4e-11 Score=107.26 Aligned_cols=150 Identities=15% Similarity=0.116 Sum_probs=101.3
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.|..++|.|+++..|+-... ++++.|. |.+.|.+|+| |+++| +||+.|+.|++|++.......
T Consensus 26 ~~l~sgs~Dg~i~vWd~~~~-------------~~~~~l~~H~~~V~~v~~--~~~~l-~s~s~D~~i~~~~~~~~~~~~ 89 (293)
T d1p22a2 26 QKIVSGLRDNTIKIWDKNTL-------------ECKRILTGHTGSVLCLQY--DERVI-ITGSSDSTVRVWDVNTGEMLN 89 (293)
T ss_dssp SEEEEEESSSCEEEEESSSC-------------CEEEEECCCSSCEEEEEC--CSSEE-EEEETTSCEEEEESSSCCEEE
T ss_pred CEEEEEeCCCeEEEEECCCC-------------cEEEEEecCCCCEeeeec--cccee-ecccccccccccccccccccc
Confidence 57889999999999983222 3455564 7788988876 67766 678899999999998654332
Q ss_pred eeeccCceE-E-------EEEeec----------------------CCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy2085 83 ERCFDSEVV-T-------FEILSD----------------------DYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM 132 (358)
Q Consensus 83 ~r~~d~e~v-~-------f~~LS~----------------------D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs 132 (358)
......... . +..... .+...|.++.+. ...+++++.||+|++||+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~s~d~~i~~~d~~~ 167 (293)
T d1p22a2 90 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWNTST 167 (293)
T ss_dssp EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTT
T ss_pred cccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceec--ccccccccCCCceeeecCCC
Confidence 211111000 0 000011 111445555554 46788899999999999999
Q ss_pred CceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 133 KVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 133 ~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
++.+..+.++...+ ..+.++ +..|++ .| +|+|||..+++
T Consensus 168 ~~~~~~~~~~~~~v-----------------~~~~~~--~~~l~~~~~dg~i~i~d~~~~~ 209 (293)
T d1p22a2 168 CEFVRTLNGHKRGI-----------------ACLQYR--DRLVVSGSSDNTIRLWDIECGA 209 (293)
T ss_dssp CCEEEEEECCSSCE-----------------EEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEEEccccccc-----------------ccccCC--CCeEEEecCCCEEEEEecccce
Confidence 99999998876654 445554 456775 57 99999999887
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.37 E-value=1e-11 Score=110.79 Aligned_cols=122 Identities=15% Similarity=0.211 Sum_probs=87.1
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
.++.+.+... ..+++|++..+++++..++.|++|++.+...... +...+.+.|++|+|+|++.+|+
T Consensus 113 ~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~------------~~~~~~~~v~~~~~s~~~~~l~ 178 (287)
T d1pgua2 113 IIKSVRLNSP--GSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFD------------LKTPLRAKPSYISISPSETYIA 178 (287)
T ss_dssp EEEEEECSSC--EEEEEECSSEEEEEETTTSCEEEEETTEEEEEEE------------CSSCCSSCEEEEEECTTSSEEE
T ss_pred eeeeccccce--eeeeeccCcceeeeccccceeeeeeccccceeee------------eeeccCCceeEEEeccCccccc
Confidence 4445554443 4567888888876665556899999875432211 1112226799999999999999
Q ss_pred EEeCCCeEEEEeCCCCceeEE-EeCCCCccccccCCCccccccCCCceeeEEcCC----------CCEEEE--ec-ceEE
Q psy2085 118 VGTIEGKVEAWDPRMKVKAGT-LDCAFNCISNERDTEEKEGKASSDESSEEEEEE----------EEEEES--SD-DDQA 183 (358)
Q Consensus 118 sGs~DGtV~iWD~Rs~~~i~~-L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d----------~~~llS--aD-~IKI 183 (358)
+|+.||.|++||+.++..+.. +..|...+ ++|+|+|. +.+|+| .| +|+|
T Consensus 179 ~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v-----------------~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~i 241 (287)
T d1pgua2 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKI-----------------NAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241 (287)
T ss_dssp EEETTSCEEEEETTTTEEEECCSCCCSSCE-----------------EEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred cccccccccceeeccccccccccccccccc-----------------ceeeecccccccccccCCCCeeEeecCCCeEEE
Confidence 999999999999999886543 45666665 67778764 467776 57 9999
Q ss_pred EECCCCc
Q psy2085 184 WTKEIKK 190 (358)
Q Consensus 184 WD~~tG~ 190 (358)
||+.++.
T Consensus 242 w~~~~~~ 248 (287)
T d1pgua2 242 YSVKRPM 248 (287)
T ss_dssp EESSCTT
T ss_pred EECCCCC
Confidence 9997643
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=2.9e-11 Score=105.12 Aligned_cols=132 Identities=14% Similarity=0.122 Sum_probs=91.0
Q ss_pred eEEEEeecCCceeeeeeccCcccCCCcccccceeEEEEee-CCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceee
Q psy2085 4 EYCYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFE-MPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKF 82 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe-~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~ 82 (358)
.+.++.++|+.+..|+.... +++..+. ++..+..+.++ +.+| ++|+.|++|+|||+.+.....
T Consensus 149 ~~~~~~s~d~~i~~~d~~~~-------------~~~~~~~~~~~~v~~~~~~--~~~l-~~~~~dg~i~i~d~~~~~~~~ 212 (293)
T d1p22a2 149 KYIVSASGDRTIKVWNTSTC-------------EFVRTLNGHKRGIACLQYR--DRLV-VSGSSDNTIRLWDIECGACLR 212 (293)
T ss_dssp TEEEEEETTSEEEEEETTTC-------------CEEEEEECCSSCEEEEEEE--TTEE-EEEETTSCEEEEETTTCCEEE
T ss_pred cccccccCCCceeeecCCCC-------------cEEEEEcccccccccccCC--CCeE-EEecCCCEEEEEecccceeee
Confidence 46678888999999983222 2334443 44556666664 5565 567789999999998754321
Q ss_pred eeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCC---------CceeEEEeCCCCccccccCCC
Q psy2085 83 ERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRM---------KVKAGTLDCAFNCISNERDTE 153 (358)
Q Consensus 83 ~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs---------~~~i~~L~~~~~~v~~~~~i~ 153 (358)
... .+...|+ .+++++.+|++|+.||+|++||+++ ..++.++.+|...|
T Consensus 213 ~~~-------------~~~~~v~--~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V------- 270 (293)
T d1p22a2 213 VLE-------------GHEELVR--CIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV------- 270 (293)
T ss_dssp EEC-------------CCSSCEE--EEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC-------
T ss_pred eec-------------ccceeee--eccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCE-------
Confidence 111 1113344 4567788999999999999999754 23567888888776
Q ss_pred ccccccCCCceeeEEcCCCCEEEE--ec-ceEEEE
Q psy2085 154 EKEGKASSDESSEEEEEEEEEEES--SD-DDQAWT 185 (358)
Q Consensus 154 gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD 185 (358)
.+|+|+ +.+|+| .| +|+|||
T Consensus 271 ----------~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 271 ----------FRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp ----------CCEEEC--SSCEEECCSSSEEEEEC
T ss_pred ----------EEEEEc--CCEEEEEecCCEEEEeC
Confidence 778885 467887 47 999998
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.27 E-value=5.2e-11 Score=115.63 Aligned_cols=155 Identities=8% Similarity=-0.155 Sum_probs=106.6
Q ss_pred EEEeecCCceeeeeeccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeee
Q psy2085 6 CYQTNWHKQAVTLVIIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERC 85 (358)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~ 85 (358)
.-+++.++.+..|+.... +++..+.....+..++|||||++|++ ++.++.|++||+.+...+....
T Consensus 35 ~v~~~d~g~v~v~D~~t~-------------~v~~~~~~g~~~~~v~fSpDG~~l~~-~s~dg~v~~~d~~t~~~~~~~~ 100 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTY-------------EIKTVLDTGYAVHISRLSASGRYLFV-IGRDGKVNMIDLWMKEPTTVAE 100 (432)
T ss_dssp EEEETTTTEEEEEETTTC-------------CEEEEEECSSCEEEEEECTTSCEEEE-EETTSEEEEEETTSSSCCEEEE
T ss_pred EEEEcCCCEEEEEECCCC-------------cEEEEEeCCCCeeEEEECCCCCEEEE-EcCCCCEEEEEeeCCCceEEEE
Confidence 357788888888884333 35666666667999999999999864 5678999999998754332221
Q ss_pred ccC-ceEEEEEeecCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeEEEeCCCCcccc-ccCCCccccccCCC
Q psy2085 86 FDS-EVVTFEILSDDYSSELNSIAINPVHQL-ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISN-ERDTEEKEGKASSD 162 (358)
Q Consensus 86 ~d~-e~v~f~~LS~D~s~~In~i~~np~~~l-lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~-~~~i~gl~GtRs~~ 162 (358)
... .... +.+.+.+|+|+++. +++++.+++|++||..+++++.++..+...+.. .+.. ...
T Consensus 101 i~~~~~~~---------~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~-------~~~ 164 (432)
T d1qksa2 101 IKIGSEAR---------SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP-------EPR 164 (432)
T ss_dssp EECCSEEE---------EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEES-------CCC
T ss_pred EecCCCCC---------CeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccC-------CCc
Confidence 110 0000 23455677889985 588899999999999999999988865433211 1111 011
Q ss_pred ceeeEEcCCCCEEE-E-ec--ceEEEECCCCc
Q psy2085 163 ESSEEEEEEEEEEE-S-SD--DDQAWTKEIKK 190 (358)
Q Consensus 163 P~sI~fs~d~~~ll-S-aD--~IKIWD~~tG~ 190 (358)
+..|.++|+|..++ + .| .|.+||..+++
T Consensus 165 ~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~ 196 (432)
T d1qksa2 165 VAAILASHYRPEFIVNVKETGKILLVDYTDLN 196 (432)
T ss_dssp EEEEEECSSSSEEEEEETTTTEEEEEETTCSS
T ss_pred eeEEEECCCCCEEEEEEccCCeEEEEEccCCC
Confidence 16789999998765 4 23 99999988766
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=6.4e-11 Score=106.61 Aligned_cols=145 Identities=17% Similarity=0.126 Sum_probs=104.0
Q ss_pred EeecCCceeeee-eccCcccCCCcccccceeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee--eee
Q psy2085 8 QTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK--FER 84 (358)
Q Consensus 8 ~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk--~~r 84 (358)
+.+.+.++..|. ...+ .++++|.+++++.+..++|||||++|++++..++.|++|++...... ...
T Consensus 9 ~~~~~~~I~v~~~~~~~-----------~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~ 77 (333)
T d1ri6a_ 9 ASPESQQIHVWNLNHEG-----------ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA 77 (333)
T ss_dssp EEGGGTEEEEEEECTTS-----------CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred ECCCCCcEEEEEEcCCC-----------CeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEee
Confidence 345677888887 3222 35789999999999999999999999888888899999999754322 111
Q ss_pred eccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCc
Q psy2085 85 CFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDE 163 (358)
Q Consensus 85 ~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P 163 (358)
+. . ....+..++|+|+++.|++++ .+++|.+|+................. .|
T Consensus 78 ~~----------~--~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---------------~~ 130 (333)
T d1ri6a_ 78 ES----------A--LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---------------GC 130 (333)
T ss_dssp EE----------E--CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---------------TB
T ss_pred ec----------c--cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCc---------------cc
Confidence 11 0 113567899999999877776 57899999987776554443211110 01
Q ss_pred eeeEEcCCCCEEEEec----ceEEEECCCCc
Q psy2085 164 SSEEEEEEEEEEESSD----DDQAWTKEIKK 190 (358)
Q Consensus 164 ~sI~fs~d~~~llSaD----~IKIWD~~tG~ 190 (358)
.++.|+|+++.++..+ .|.+|+..+..
T Consensus 131 ~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~ 161 (333)
T d1ri6a_ 131 HSANISPDNRTLWVPALKQDRICLFTVSDDG 161 (333)
T ss_dssp CCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred eEEEeeecceeeeccccccceeeEEEeccCC
Confidence 6789999999888643 89999987654
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.24 E-value=1.8e-11 Score=111.02 Aligned_cols=105 Identities=8% Similarity=0.005 Sum_probs=80.2
Q ss_pred EEEcC-CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCC--eEEE
Q psy2085 51 VRISP-DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEG--KVEA 127 (358)
Q Consensus 51 v~~Sp-DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DG--tV~i 127 (358)
-.||| ||+++++ ++ .++|.|||+.+..... . .+...|.+++|+|+++.|++++.++ +|.+
T Consensus 8 ~~fSP~dG~~~a~-~~-~g~v~v~d~~~~~~~~---~------------~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v 70 (360)
T d1k32a3 8 EDFSPLDGDLIAF-VS-RGQAFIQDVSGTYVLK---V------------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGI 70 (360)
T ss_dssp EEEEECGGGCEEE-EE-TTEEEEECTTSSBEEE---C------------SCCSCEEEEEECSSSEEEEEEEETTEEEEEE
T ss_pred ccccCCCCCEEEE-EE-CCeEEEEECCCCcEEE---c------------cCCCCEEEEEECCCCCEEEEEEcCCCCEEEE
Confidence 46999 9998754 43 6799999997643211 1 1226799999999999888766543 8999
Q ss_pred EeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 128 WDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 128 WD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
||.+++... .+..+...+ ..+.|+|+|++|++ .| .+++|+..+++
T Consensus 71 ~d~~~~~~~-~~~~~~~~v-----------------~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 118 (360)
T d1k32a3 71 YDYRTGKAE-KFEENLGNV-----------------FAMGVDRNGKFAVVANDRFEIMTVDLETGK 118 (360)
T ss_dssp EETTTCCEE-ECCCCCCSE-----------------EEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EECCCCcEE-EeeCCCceE-----------------Eeeeecccccccceeccccccccccccccc
Confidence 999887654 455555554 78999999999996 45 99999999887
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.12 E-value=3.1e-10 Score=101.83 Aligned_cols=116 Identities=8% Similarity=0.019 Sum_probs=84.1
Q ss_pred EEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE-EEEeCCCeEEEEe
Q psy2085 51 VRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI-CVGTIEGKVEAWD 129 (358)
Q Consensus 51 v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll-asGs~DGtV~iWD 129 (358)
++||++|+|| ++++.+++|.|||+.+..+. +. ..+.. ...+.+++|+|+++.+ ++++.+|+|.+||
T Consensus 2 ~a~~~~~~~l-~~~~~~~~v~v~D~~t~~~~--~t--------~~~~~--~~~p~~l~~spDG~~l~v~~~~~~~v~~~d 68 (346)
T d1jmxb_ 2 PALKAGHEYM-IVTNYPNNLHVVDVASDTVY--KS--------CVMPD--KFGPGTAMMAPDNRTAYVLNNHYGDIYGID 68 (346)
T ss_dssp CCCCTTCEEE-EEEETTTEEEEEETTTTEEE--EE--------EECSS--CCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccCCCCCcEE-EEEcCCCEEEEEECCCCCEE--EE--------EEcCC--CCCcceEEECCCCCEEEEEECCCCcEEEEe
Confidence 4789999997 56778999999999875431 11 11111 1457899999999864 7777899999999
Q ss_pred CCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--------------c-ceEEEECCCCc
Q psy2085 130 PRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--------------D-DDQAWTKEIKK 190 (358)
Q Consensus 130 ~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--------------D-~IKIWD~~tG~ 190 (358)
+.+++.+..+............+ ..++|+|||++|+.+ + .+.+||..+|+
T Consensus 69 ~~t~~~~~~~~~~~~~~~~~~~~-----------~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 133 (346)
T d1jmxb_ 69 LDTCKNTFHANLSSVPGEVGRSM-----------YSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 133 (346)
T ss_dssp TTTTEEEEEEESCCSTTEEEECS-----------SCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CccCeeeeeecccccccccCCce-----------EEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccce
Confidence 99999998887544322111112 679999999988632 4 78899998877
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.09 E-value=1.6e-10 Score=110.52 Aligned_cols=111 Identities=12% Similarity=0.010 Sum_probs=79.0
Q ss_pred EEcCCCCE-EEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy2085 52 RISPDGQY-VLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDP 130 (358)
Q Consensus 52 ~~SpDG~~-LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~ 130 (358)
.+++|.+. ++++.+.+++|+|||+.+.... +.+.. . ..+..|+|||++++|++++.||+|++||+
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~--~~l~~----------g--~~~~~vafSPDGk~l~~~~~d~~v~vwd~ 90 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIV--KVIDT----------G--YAVHISRMSASGRYLLVIGRDARIDMIDL 90 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTCSEE--EEEEC----------C--SSEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECCCCcEE--EEEeC----------C--CCeeEEEECCCCCEEEEEeCCCCEEEEEc
Confidence 35666553 4477788999999999875432 11110 0 46899999999999999999999999999
Q ss_pred CCCceeEE--EeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 131 RMKVKAGT--LDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 131 Rs~~~i~~--L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
.++++..+ +.....+.... .++.|+|||++|+. .| +++|||..++.
T Consensus 91 ~t~~~~~~~~i~~~~~~~~~~--------------~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~ 142 (426)
T d1hzua2 91 WAKEPTKVAEIKIGIEARSVE--------------SSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 142 (426)
T ss_dssp TSSSCEEEEEEECCSEEEEEE--------------ECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cCCceeEEEEEeCCCCCcceE--------------EeeeecCCCCEEEEeecCCCeEEEEcCCccc
Confidence 99886543 33221110000 46778899998864 35 99999999876
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.07 E-value=6.1e-10 Score=107.90 Aligned_cols=158 Identities=9% Similarity=-0.001 Sum_probs=106.5
Q ss_pred eEEEEeecCCceeeee-eccCcccCCCcccccceeEEEEe-eCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCcee
Q psy2085 4 EYCYQTNWHKQAVTLV-IIGGRYLLPTNDIRRRIELIQDF-EMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMK 81 (358)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~r~lk~d~~~~~rIeliqdf-e~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk 81 (358)
.|+|+.|.|+++..|+ ...+. ..+--|+.. ++.+.+.++.|||||++|++++..++.|+|||+.+..+.
T Consensus 74 ~~l~~~s~dg~v~~~d~~t~~~---------~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~ 144 (432)
T d1qksa2 74 RYLFVIGRDGKVNMIDLWMKEP---------TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 144 (432)
T ss_dssp CEEEEEETTSEEEEEETTSSSC---------CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CEEEEEcCCCCEEEEEeeCCCc---------eEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccce
Confidence 5889999999999998 33221 011112222 233456777889999999999999999999999876543
Q ss_pred eeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEEeCCCCceeE--EEeCCCCccccccCCCccccc
Q psy2085 82 FERCFDSEVVTFEILSDDYSSELNSIAINPVHQL-ICVGTIEGKVEAWDPRMKVKAG--TLDCAFNCISNERDTEEKEGK 158 (358)
Q Consensus 82 ~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l-lasGs~DGtV~iWD~Rs~~~i~--~L~~~~~~v~~~~~i~gl~Gt 158 (358)
.........+....++++ +....|.++|++.. +++.+.+|.|.+||..+.+... .+.....+
T Consensus 145 ~~~~~~~~~~~~~~~~~~--~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~------------- 209 (432)
T d1qksa2 145 KIQSTRGMTYDEQEYHPE--PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFL------------- 209 (432)
T ss_dssp EEEECCEECTTTCCEESC--CCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSE-------------
T ss_pred eeeccCCccccceeccCC--CceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCcc-------------
Confidence 221111111111112222 56788999999875 5677789999999998877544 34332222
Q ss_pred cCCCceeeEEcCCCCEEEE--ec--ceEEEECCCCc
Q psy2085 159 ASSDESSEEEEEEEEEEES--SD--DDQAWTKEIKK 190 (358)
Q Consensus 159 Rs~~P~sI~fs~d~~~llS--aD--~IKIWD~~tG~ 190 (358)
..+.|+|+|++++. .+ .+.+||..+++
T Consensus 210 -----~~~~~spdg~~~~va~~~~~~v~v~d~~~~~ 240 (432)
T d1qksa2 210 -----HDGGLDGSHRYFITAANARNKLVVIDTKEGK 240 (432)
T ss_dssp -----EEEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred -----ccceECCCCCEEEEeccccceEEEeecccce
Confidence 67999999998775 33 99999998877
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.06 E-value=6.7e-09 Score=92.99 Aligned_cols=42 Identities=17% Similarity=0.278 Sum_probs=33.1
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCC
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNL 78 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~l 78 (358)
+++........+..++|||||++|++++..++.|.+|+....
T Consensus 74 ~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~ 115 (333)
T d1ri6a_ 74 TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 115 (333)
T ss_dssp EEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccc
Confidence 455555566667889999999999887767889999987654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.97 E-value=3.9e-09 Score=94.11 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=89.2
Q ss_pred eEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeec-----------c----------Cc--eEEE
Q psy2085 37 ELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCF-----------D----------SE--VVTF 93 (358)
Q Consensus 37 eliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~-----------d----------~e--~v~f 93 (358)
+.+..+.++..+.++.|+|||+++++++ +.+.+||+........... + .. ....
T Consensus 126 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (337)
T d1pbyb_ 126 SRRKAFEAPRQITMLAWARDGSKLYGLG---RDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPF 202 (337)
T ss_dssp EEEEEEECCSSCCCEEECTTSSCEEEES---SSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEE
T ss_pred eEEEeccccCCceEEEEcCCCCEEEEEc---CCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeee
Confidence 4556666777788999999999987653 3478899875432211000 0 00 0000
Q ss_pred E-------------------------------EeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 94 E-------------------------------ILSDDYSSELNSIAINPVHQLICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 94 ~-------------------------------~LS~D~s~~In~i~~np~~~llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
. .+++. ...+.+++++|++.+++.+ +++|++||+.+++.+..+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~~ 279 (337)
T d1pbyb_ 203 YTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM-DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP 279 (337)
T ss_dssp EEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC-SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS
T ss_pred eeeeeccceeeecccCccEEEEEcCCCcEEEEEecCC-CcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEcCC
Confidence 0 00010 0456677888888887765 589999999999999988765
Q ss_pred CCccccccCCCccccccCCCceeeEEcCCCCEEEE--ec-ceEEEECCCCc
Q psy2085 143 FNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--SD-DDQAWTKEIKK 190 (358)
Q Consensus 143 ~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--aD-~IKIWD~~tG~ 190 (358)
..+ .+|+|+|||++|++ .| +|.|||..+++
T Consensus 280 ~~~------------------~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~ 312 (337)
T d1pbyb_ 280 HSY------------------YSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp SCC------------------CEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCE------------------EEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 433 78999999999886 46 99999999988
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.89 E-value=1.5e-08 Score=89.17 Aligned_cols=101 Identities=6% Similarity=0.018 Sum_probs=79.8
Q ss_pred CEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE-EEEeCCCeEEEEeCCCCcee
Q psy2085 58 QYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI-CVGTIEGKVEAWDPRMKVKA 136 (358)
Q Consensus 58 ~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll-asGs~DGtV~iWD~Rs~~~i 136 (358)
.|+.++++.+++|.|||+.+..+ .+... +. ..+..++|+|+++.| ++++.+++|.+||+.+++.+
T Consensus 2 ~~~yV~~~~~~~v~v~D~~t~~~--~~~i~--------~g----~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~ 67 (301)
T d1l0qa2 2 TFAYIANSESDNISVIDVTSNKV--TATIP--------VG----SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI 67 (301)
T ss_dssp EEEEEEETTTTEEEEEETTTTEE--EEEEE--------CS----SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE
T ss_pred eEEEEEECCCCEEEEEECCCCeE--EEEEE--------CC----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcee
Confidence 37778888899999999987532 22111 11 357889999999855 67788999999999999999
Q ss_pred EEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE---ec-ceEEEECCCCc
Q psy2085 137 GTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES---SD-DDQAWTKEIKK 190 (358)
Q Consensus 137 ~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS---aD-~IKIWD~~tG~ 190 (358)
.++..+..+ ..+.|++++..++. .| .+.+||..+++
T Consensus 68 ~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (301)
T d1l0qa2 68 ATVPAGSSP------------------QGVAVSPDGKQVYVTNMASSTLSVIDTTSNT 107 (301)
T ss_dssp EEEECSSSE------------------EEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred eeeeccccc------------------cccccccccccccccccccceeeecccccce
Confidence 999877654 77999999997764 24 99999999887
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.78 E-value=8.1e-08 Score=87.88 Aligned_cols=141 Identities=6% Similarity=-0.022 Sum_probs=91.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeee--eccC---ce----------EEEEEeecCCC---------
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFER--CFDS---EV----------VTFEILSDDYS--------- 101 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r--~~d~---e~----------v~f~~LS~D~s--------- 101 (358)
....++.++|+|+.++++++.++++.+||+......... +... .. -.+...+++.+
T Consensus 165 ~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 244 (373)
T d2madh_ 165 SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred ccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCC
Confidence 345688999999998888889999999998754322110 0000 00 00001111100
Q ss_pred ----------------------CCeeEEEEcCCCC----------EEEEEeCCCeEEEEeCCCCceeEEEeCCCCccccc
Q psy2085 102 ----------------------SELNSIAINPVHQ----------LICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNE 149 (358)
Q Consensus 102 ----------------------~~In~i~~np~~~----------llasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~ 149 (358)
.....++++|++. .++++..++.|.+||..+++.+..+.....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~~~~---- 320 (373)
T d2madh_ 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDV---- 320 (373)
T ss_pred eEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEecCCCCe----
Confidence 1223345555544 3345566788999999999999888754433
Q ss_pred cCCCccccccCCCceeeEEcCCCCEE--EE--ec-ceEEEECCCCcE---E-ecCCCCCccccc
Q psy2085 150 RDTEEKEGKASSDESSEEEEEEEEEE--ES--SD-DDQAWTKEIKKT---Y-NLGPAPKWCGFL 204 (358)
Q Consensus 150 ~~i~gl~GtRs~~P~sI~fs~d~~~l--lS--aD-~IKIWD~~tG~~---y-~lgpap~Wcsfl 204 (358)
..++|+|||+.+ ++ .| +|+|||..+|+. . ..|..|.|-+..
T Consensus 321 --------------~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~ 370 (373)
T d2madh_ 321 --------------DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred --------------eEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEe
Confidence 779999999854 34 46 999999999993 3 578888875543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.68 E-value=7.3e-08 Score=89.36 Aligned_cols=58 Identities=5% Similarity=0.131 Sum_probs=40.6
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCC-EEE-E--ec-ceEEEECCCCcE---EecC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEE-EEE-S--SD-DDQAWTKEIKKT---YNLG 195 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~-~ll-S--aD-~IKIWD~~tG~~---y~lg 195 (358)
.|.+||..+++.+.++.....+ .+++|+|||+ +|+ + .| +|.|||..+|+. ..+|
T Consensus 295 ~v~v~D~~t~~~~~~~~~~~~~------------------~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g 356 (368)
T d1mdah_ 295 NTSSVTASVGQTSGPISNGHDS------------------DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEEEESSSCCEEECCEEEEEE------------------CEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred eEEEEECCCCcEeEEecCCCce------------------eEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEEECC
Confidence 4666777777666665533221 7799999997 344 4 36 999999999993 3777
Q ss_pred CCCC
Q psy2085 196 PAPK 199 (358)
Q Consensus 196 pap~ 199 (358)
..|.
T Consensus 357 ~~P~ 360 (368)
T d1mdah_ 357 KGPE 360 (368)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 7775
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.55 E-value=3.4e-07 Score=82.66 Aligned_cols=114 Identities=11% Similarity=-0.028 Sum_probs=80.4
Q ss_pred EEcCCCCEEEEEE----ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE--------
Q psy2085 52 RISPDGQYVLSTG----IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG-------- 119 (358)
Q Consensus 52 ~~SpDG~~LlatG----~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG-------- 119 (358)
+.||||+.++++. ....+|.|||..+..+. +..+ . +.+..++|+|++++|++.
T Consensus 8 a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~--~~~~----------~---g~~~~~a~SpDg~~l~v~~~~~~~~~ 72 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVI--GMID----------G---GFLPNPVVADDGSFIAHASTVFSRIA 72 (355)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEE--EEEE----------E---CSSCEEEECTTSSCEEEEEEEEEETT
T ss_pred eeCCCCCEEEEEecccCCCcCeEEEEECCCCcEE--EEEE----------C---CCCCceEEcCCCCEEEEEeCCCcccc
Confidence 5689999987763 23457999999875431 1110 1 345579999999977653
Q ss_pred --eCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE----ec-ceEEEECCCCc
Q psy2085 120 --TIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES----SD-DDQAWTKEIKK 190 (358)
Q Consensus 120 --s~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS----aD-~IKIWD~~tG~ 190 (358)
+.||.|.+||+.+++.+..+..+....... ...|..+.|+|+++.++. .+ .+.+||..+++
T Consensus 73 ~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~----------~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~ 140 (355)
T d2bbkh_ 73 RGERTDYVEVFDPVTLLPTADIELPDAPRFLV----------GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140 (355)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCB----------SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccCCCCEEEEEECCCCCEEEEEecCCcceeec----------CCCCceEEEecCCCeeEEecCCCCceeeeeecCCCc
Confidence 458999999999999998887544321110 011267999999998774 24 89999999987
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.52 E-value=4.1e-07 Score=86.99 Aligned_cols=128 Identities=13% Similarity=-0.027 Sum_probs=79.4
Q ss_pred CCCCEeEEEEcCCCCEEEEEE--------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 44 MPGVSTSVRISPDGQYVLSTG--------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 44 ~~~~v~~v~~SpDG~~LlatG--------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
+...+.++.|||||++|+.+. ++++.+.|||+.+..++.... ....+..+.|||+|+.
T Consensus 60 ~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~--------------~~~~~~~~~~SPDG~~ 125 (470)
T d2bgra1 60 FGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER--------------IPNNTQWVTWSPVGHK 125 (470)
T ss_dssp SSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC--------------CCTTEEEEEECSSTTC
T ss_pred ccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCccccccc--------------CCccccccccccCcce
Confidence 345789999999999987543 335678999998764321111 1156889999999999
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEeCCCCccccccCCCccc-cccCCCceeeEEcCCCCEEEE--ec--ceEEEEC
Q psy2085 116 ICVGTIEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKE-GKASSDESSEEEEEEEEEEES--SD--DDQAWTK 186 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~-GtRs~~P~sI~fs~d~~~llS--aD--~IKIWD~ 186 (358)
||.. .++.+.+|+..++..+.....+..........+.+. ..-......+.|||||++|+. .| .|+.|+.
T Consensus 126 ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 126 LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred eeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCCcCceEEE
Confidence 9995 578999999998876654432211110000000000 000000156889999999985 45 4555543
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.44 E-value=2.8e-06 Score=77.31 Aligned_cols=85 Identities=9% Similarity=-0.044 Sum_probs=62.8
Q ss_pred CCCEeEEEEcCCCCEEEE---------EEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC-
Q psy2085 45 PGVSTSVRISPDGQYVLS---------TGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ- 114 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~Lla---------tG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~- 114 (358)
|.....+.++|||..++. ++..++.|.+||+.+....- . +..+ ..+.+++|+|+++
T Consensus 266 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~--~----------~~~~--~~~~~~a~spDG~~ 331 (373)
T d2madh_ 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS--Q----------ISLG--HDVDAISVAQDGGP 331 (373)
T ss_pred cCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEE--E----------ecCC--CCeeEEEECCCCCE
Confidence 445567788888876553 34556789999987654221 1 1111 5688999999997
Q ss_pred -EEEEEeCCCeEEEEeCCCCceeEEEeCCC
Q psy2085 115 -LICVGTIEGKVEAWDPRMKVKAGTLDCAF 143 (358)
Q Consensus 115 -llasGs~DGtV~iWD~Rs~~~i~~L~~~~ 143 (358)
++++++.||+|++||+.+++.++++..+.
T Consensus 332 ~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g 361 (373)
T d2madh_ 332 DLYALSAGTEVLHIYDAGAGDQDQSTVELG 361 (373)
T ss_pred EEEEEeCCCCeEEEEECCCCCEEEEECCCC
Confidence 56899999999999999999999998653
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.40 E-value=7e-07 Score=80.50 Aligned_cols=83 Identities=12% Similarity=0.059 Sum_probs=62.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecC---------CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC--
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYK---------PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ-- 114 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d---------~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~-- 114 (358)
.....+.++|||..++++.... ..|.+||+.+.... +... . + ..+.+++|+|+++
T Consensus 249 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~--~~~~--------~--~--~~~~~~a~spDG~~~ 314 (355)
T d2bbkh_ 249 GGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFE--------M--G--HEIDSINVSQDEKPL 314 (355)
T ss_dssp CSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEE--------E--E--EEECEEEECCSSSCE
T ss_pred cceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEE--EEec--------C--C--CCEEEEEEcCCCCeE
Confidence 3456789999999887764332 47999999875422 1110 0 0 3578999999987
Q ss_pred EEEEEeCCCeEEEEeCCCCceeEEEeCC
Q psy2085 115 LICVGTIEGKVEAWDPRMKVKAGTLDCA 142 (358)
Q Consensus 115 llasGs~DGtV~iWD~Rs~~~i~~L~~~ 142 (358)
++++++.||+|.+||+++++.+++|..+
T Consensus 315 l~v~~~~d~~i~v~D~~tg~~~~~i~~~ 342 (355)
T d2bbkh_ 315 LYALSTGDKTLYIHDAESGEELRSVNQL 342 (355)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred EEEEECCCCEEEEEECCCCCEEEEEeCc
Confidence 6788888999999999999999999754
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.34 E-value=9.2e-07 Score=84.48 Aligned_cols=116 Identities=12% Similarity=0.066 Sum_probs=82.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC----
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI---- 121 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~---- 121 (358)
.....+.|++||+|+. . .++.|.+||+.+.... +-++... + .++...|.++.|||+++.|++++.
T Consensus 17 ~~~~~~~W~~d~~~~~-~--~~~~~~~~~~~t~~~~--~~~~~~~-----~-~~~~~~i~~~~~SpDg~~i~~~~~~~~~ 85 (470)
T d2bgra1 17 LKLYSLRWISDHEYLY-K--QENNILVFNAEYGNSS--VFLENST-----F-DEFGHSINDYSISPDGQFILLEYNYVKQ 85 (470)
T ss_dssp CCCCCCEECSSSEEEE-E--SSSCEEEEETTTCCEE--EEECTTT-----T-TTSSSCCCEEEECTTSSEEEEEEEEEEC
T ss_pred ccccCCEeCCCCEEEE-E--cCCcEEEEECCCCCEE--EEEchhh-----h-hhccCccceeEECCCCCEEEEEECCcce
Confidence 3445689999999874 3 4678999999876432 1111100 0 112257899999999998888754
Q ss_pred -----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCCCc
Q psy2085 122 -----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEIKK 190 (358)
Q Consensus 122 -----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~tG~ 190 (358)
+|.+.+||+.+++. ..+..+...+ ..+.|||||+.|+. .| .+.+|+..+|+
T Consensus 86 ~r~s~~~~~~l~d~~~~~~-~~l~~~~~~~-----------------~~~~~SPDG~~ia~~~~~~l~~~~~~~g~ 143 (470)
T d2bgra1 86 WRHSYTASYDIYDLNKRQL-ITEERIPNNT-----------------QWVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (470)
T ss_dssp SSSCEEEEEEEEETTTTEE-CCSSCCCTTE-----------------EEEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eeeccCceEEEEECCCCcc-cccccCCccc-----------------cccccccCcceeeEeecccceEEECCCCc
Confidence 57888999998864 3344444333 67899999999986 67 99999999887
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.25 E-value=1.7e-06 Score=79.77 Aligned_cols=119 Identities=5% Similarity=-0.158 Sum_probs=78.9
Q ss_pred CEeEEEEcCCCCE--EEEEEecCC--eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe--
Q psy2085 47 VSTSVRISPDGQY--VLSTGIYKP--RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-- 120 (358)
Q Consensus 47 ~v~~v~~SpDG~~--LlatG~~d~--~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-- 120 (358)
....++.++||+. +..+....+ +|.+||..+..+. +.. .. +....++|+|++..|++.+
T Consensus 21 ~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~--~~~----------~~---~~~~~~a~spDg~~i~~~~~~ 85 (368)
T d1mdah_ 21 SSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTL--GHS----------LG---AFLSLAVAGHSGSDFALASTS 85 (368)
T ss_dssp CCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEE--EEE----------EE---CTTCEEEECTTSSCEEEEEEE
T ss_pred CccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEE--EEE----------eC---CCCCcceECCCCCEEEEEccc
Confidence 3455567888885 433333334 4666687654321 111 01 2345789999999887754
Q ss_pred --------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe---c-ceEEEECCC
Q psy2085 121 --------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS---D-DDQAWTKEI 188 (358)
Q Consensus 121 --------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa---D-~IKIWD~~t 188 (358)
.|++|.+||+.+++++..+..+....... ...|..++|+|||++|+.+ + .|.+||+.+
T Consensus 86 ~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~----------g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~ 155 (368)
T d1mdah_ 86 FARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSV----------GPRVHIIGNCASSACLLFFLFGSSAAAGLSVPG 155 (368)
T ss_dssp ETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCB----------SCCTTSEEECTTSSCEEEEECSSSCEEEEEETT
T ss_pred CccccccccCCeEEEEECCCCcEeeeecCCccceecc----------cCCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 47889999999999999887654322110 0112679999999988742 4 999999999
Q ss_pred Cc
Q psy2085 189 KK 190 (358)
Q Consensus 189 G~ 190 (358)
++
T Consensus 156 ~~ 157 (368)
T d1mdah_ 156 AS 157 (368)
T ss_dssp TE
T ss_pred Cc
Confidence 87
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.86 E-value=5e-06 Score=81.18 Aligned_cols=126 Identities=16% Similarity=0.233 Sum_probs=82.3
Q ss_pred EEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEE
Q psy2085 38 LIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSE-VVTFEILSDDYSSELNSIAINPVHQLI 116 (358)
Q Consensus 38 liqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~ll 116 (358)
++..+.-+..-..|.+||||+|++++|..+++|.|||+..+...++.+++.. .+... +.-.-+....+|.+++..+
T Consensus 250 v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~---~~~glgplh~~fd~~g~~y 326 (441)
T d1qnia2 250 FTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAE---PELGLGPLHTTFDGRGNAY 326 (441)
T ss_dssp SEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEEC---CBCCSCEEEEEECSSSEEE
T ss_pred eEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEee---cccccCcccceecCCceEE
Confidence 4444444455678999999999999999999999999975422122222211 11111 1111245677999999999
Q ss_pred EEEeCCCeEEEEeCC----------CCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe
Q psy2085 117 CVGTIEGKVEAWDPR----------MKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS 178 (358)
Q Consensus 117 asGs~DGtV~iWD~R----------s~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa 178 (358)
.|.+-|.+|..|++. ....+..++.|.++- ....+ .+..|+|||++|+|.
T Consensus 327 ts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~G-H~~~~-----------~~~t~~pdGk~l~s~ 386 (441)
T d1qnia2 327 TTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPG-HNHAS-----------LTESRDADGKWLVVL 386 (441)
T ss_dssp EEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEET-----------TTTSTTCCCCEEEEE
T ss_pred EcccccceEEEeccchhhhhhccCCCceeEeccccccCCC-CCccc-----------cccccCCCCcEEEec
Confidence 999999999999973 122356676665431 10001 456789999999985
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.79 E-value=7.9e-05 Score=72.42 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=54.1
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCC--EEEEEeCCC
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQ--LICVGTIEG 123 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~--llasGs~DG 123 (358)
....+..++|||+||+++....++|.++|+.++.. ...+.- |. ..++..++|+|+++ ++++++++.
T Consensus 72 P~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~--~~ii~i---------P~-g~gphgi~~spdg~t~YV~~~~~~~ 139 (441)
T d1qnia2 72 PHISMTDGRYDGKYLFINDKANTRVARIRLDIMKT--DKITHI---------PN-VQAIHGLRLQKVPKTNYVFCNAEFV 139 (441)
T ss_dssp CEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE--EEEEEC---------TT-CCCEEEEEECCSSBCCEEEEEECSC
T ss_pred CCcceecccCCCCEEEEEcCCCCEEEEEECCCCcE--eeEEec---------CC-CCCccceEEeccCCEEEEEeccCCc
Confidence 35667778999999999988899999999987532 111110 11 14677888888776 455555442
Q ss_pred -----------------eEEEEeCCCCceeEEE
Q psy2085 124 -----------------KVEAWDPRMKVKAGTL 139 (358)
Q Consensus 124 -----------------tV~iWD~Rs~~~i~~L 139 (358)
.+..+|+.+.+....+
T Consensus 140 v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI 172 (441)
T d1qnia2 140 IPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQV 172 (441)
T ss_dssp EESSCSSSCCCGGGEEEEEEEEETTTCSEEEEE
T ss_pred ccccCcccccccccccceEEeecCccceeeEEE
Confidence 2455788777655433
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.75 E-value=0.00029 Score=63.37 Aligned_cols=123 Identities=10% Similarity=0.029 Sum_probs=83.3
Q ss_pred eeEEEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCE
Q psy2085 36 IELIQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQL 115 (358)
Q Consensus 36 Ieliqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~l 115 (358)
-+++..|.-+..+..++++|||+. ++|....++|..||.... ... +.. .. ..+++++|.|++++
T Consensus 18 ~~v~~~~p~~~~~e~iAv~pdG~l-~vt~~~~~~I~~i~p~g~-~~~----------~~~--~~--~~~~gla~~~dG~l 81 (302)
T d2p4oa1 18 AKIITSFPVNTFLENLASAPDGTI-FVTNHEVGEIVSITPDGN-QQI----------HAT--VE--GKVSGLAFTSNGDL 81 (302)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCE-EEEETTTTEEEEECTTCC-EEE----------EEE--CS--SEEEEEEECTTSCE
T ss_pred ccEEEECCCCCCcCCEEECCCCCE-EEEeCCCCEEEEEeCCCC-EEE----------EEc--CC--CCcceEEEcCCCCe
Confidence 356777877777889999999985 567777888888875532 111 111 11 56899999999999
Q ss_pred EEEEeCCCeEEEEeCCCCce-eEEE-eCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe--c-ceEEEECCCCc
Q psy2085 116 ICVGTIEGKVEAWDPRMKVK-AGTL-DCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS--D-DDQAWTKEIKK 190 (358)
Q Consensus 116 lasGs~DGtV~iWD~Rs~~~-i~~L-~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa--D-~IKIWD~~tG~ 190 (358)
++++..++.+..|+...... ...+ ...... .|+.+.+.++++.+++. + .+..+|..++.
T Consensus 82 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~ 145 (302)
T d2p4oa1 82 VATGWNADSIPVVSLVKSDGTVETLLTLPDAI----------------FLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 145 (302)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEEEECTTCS----------------CEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEecCCceEEEEEecccccceeeccccCCcc----------------ccceeEEccCCCEEeeccccccceeeeccCCc
Confidence 99998899988888654322 2222 111110 11779999999877763 3 66677777665
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.64 E-value=0.0007 Score=62.84 Aligned_cols=122 Identities=7% Similarity=-0.000 Sum_probs=71.3
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCc-eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEE-EEEeCCCe
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLS-MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLI-CVGTIEGK 124 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~ls-lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~ll-asGs~DGt 124 (358)
.+.++.|+|||++|+++.....+|.+|++.... +..... .....+ ..+...++|+|+++++ +++-.+++
T Consensus 146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~-------~~~~~~--g~gPr~i~f~pdg~~~yv~~e~~~~ 216 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGS-------VDAPDP--GDHPRWVAMHPTGNYLYALMEAGNR 216 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEE-------EECSST--TCCEEEEEECTTSSEEEEEETTTTE
T ss_pred cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccc-------eeecCC--CCceEEEEECCCCceEEEeccCCCE
Confidence 468999999999999887667789999876432 111100 111111 1578999999999976 55556899
Q ss_pred EEEEeCCCCceeEEEeCCCCccccccCCCc-cc-cccCCCceeeEEcCCCCEEEE
Q psy2085 125 VEAWDPRMKVKAGTLDCAFNCISNERDTEE-KE-GKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 125 V~iWD~Rs~~~i~~L~~~~~~v~~~~~i~g-l~-GtRs~~P~sI~fs~d~~~llS 177 (358)
|.+||...+...........++........ .. ......+..|.++|+|++|++
T Consensus 217 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv 271 (365)
T d1jofa_ 217 ICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp EEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred EEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEE
Confidence 999998766543222211111000000000 00 000001157899999999985
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.56 E-value=0.0019 Score=55.33 Aligned_cols=37 Identities=19% Similarity=0.073 Sum_probs=24.7
Q ss_pred eCCCCEeEEEEcCCCCEEEEEEecCC--eEEEEEcCCCc
Q psy2085 43 EMPGVSTSVRISPDGQYVLSTGIYKP--RVRCYETDNLS 79 (358)
Q Consensus 43 e~~~~v~~v~~SpDG~~LlatG~~d~--~IrvwDl~~ls 79 (358)
+.+..+..-+|||||++|+-+....+ .+.+.+.....
T Consensus 36 ~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~ 74 (269)
T d2hqsa1 36 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 74 (269)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc
Confidence 34566788999999999976544343 45555655443
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.34 E-value=0.0023 Score=59.21 Aligned_cols=129 Identities=10% Similarity=0.027 Sum_probs=76.4
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeec--------CCC--CCeeEEEEcCCCCE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSD--------DYS--SELNSIAINPVHQL 115 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~--------D~s--~~In~i~~np~~~l 115 (358)
.....+.|+|||+++.+++..+++|.+|++........... -....+.+ ++. .....|.++|++..
T Consensus 193 ~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ 268 (365)
T d1jofa_ 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTH----HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE----EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSE
T ss_pred CceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEe----eeeccccccccccccccccccCCccceEECCCCCE
Confidence 46788999999999999998999999999976433211110 00000100 111 23567899999997
Q ss_pred EEEEeC------CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcC-CCCEEEEec----ceEEE
Q psy2085 116 ICVGTI------EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEE-EEEEEESSD----DDQAW 184 (358)
Q Consensus 116 lasGs~------DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~-d~~~llSaD----~IKIW 184 (358)
|.++.. .+.|-.|++.....+..+..-....+ ....|..|+|+| +|++|+.++ .|.||
T Consensus 269 lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~-----------~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~ 337 (365)
T d1jofa_ 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPT-----------SGGHSNAVSPCPWSDEWMAITDDQEGWLEIY 337 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSS-----------CCTTCCCEEECTTCTTEEEEECSSSCEEEEE
T ss_pred EEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEc-----------CCCCccEEEecCCCCCEEEEEeCCCCeEEEE
Confidence 766532 23477777654433322211000000 001237799998 789887542 99999
Q ss_pred ECCCC
Q psy2085 185 TKEIK 189 (358)
Q Consensus 185 D~~tG 189 (358)
+.+..
T Consensus 338 ~~~~~ 342 (365)
T d1jofa_ 338 RWKDE 342 (365)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 87543
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.25 E-value=0.0033 Score=56.93 Aligned_cols=113 Identities=11% Similarity=0.035 Sum_probs=75.9
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..+.|+|+|||+.|..+-+..++|..||+.......... ........... ..-..+++.+++++.++....|.|.
T Consensus 178 ~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~----~~~~~~~~~~~-~~PdGl~vD~~G~l~Va~~~~g~V~ 252 (319)
T d2dg1a1 178 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF----GATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVL 252 (319)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEE----EEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred eeeeeeeccccceEEEecccCCceEEEEEcCCCceeccc----cceeeeccCCc-cceeeeeEcCCCCEEEEEcCCCEEE
Confidence 358899999999887887788899999986431110000 00000100000 2346799999999999988999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
++|+ .++.+..+..+....+.+... .+++|.+++..++
T Consensus 253 ~~~p-~G~~l~~i~~P~~~~~~~~~~-----------~~~~~~~~~~~~~ 290 (319)
T d2dg1a1 253 VFNK-RGYPIGQILIPGRDEGHMLRS-----------THPQFIPGTNQLI 290 (319)
T ss_dssp EECT-TSCEEEEEECTTGGGTCSCBC-----------CEEEECTTSCEEE
T ss_pred EECC-CCcEEEEEeCCCcCCCcCcee-----------eeEEEeCCCCEEE
Confidence 9997 688999998765432211111 6789998887766
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.25 E-value=0.0042 Score=56.29 Aligned_cols=105 Identities=8% Similarity=0.147 Sum_probs=72.0
Q ss_pred EeEEEEcCCCC----EEEEEEecCCeEEEEEcCCC-ceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC
Q psy2085 48 STSVRISPDGQ----YVLSTGIYKPRVRCYETDNL-SMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE 122 (358)
Q Consensus 48 v~~v~~SpDG~----~LlatG~~d~~IrvwDl~~l-slk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D 122 (358)
.|.++|+||+. +|.++-+..++|..||+... .+...+ + +..+..........+++.+++++.++....
T Consensus 174 pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~-----~--~~~~~~~~~~~pdGiavD~~GnlyVa~~~~ 246 (314)
T d1pjxa_ 174 PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKK-----V--WGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEE-----E--EEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred eeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceee-----E--EEEccccccccceeeEEecCCcEEEEEcCC
Confidence 37899999875 66666667788988887532 221110 0 111111111235679999999999888888
Q ss_pred CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEE
Q psy2085 123 GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEE 176 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~ll 176 (358)
|.|.+||+..+..+..+..+.... .+++|.|+++.|+
T Consensus 247 g~I~~~dp~~g~~~~~i~~p~~~~-----------------t~~afg~d~~~ly 283 (314)
T d1pjxa_ 247 SHIEVFGPDGGQPKMRIRCPFEKP-----------------SNLHFKPQTKTIF 283 (314)
T ss_dssp TEEEEECTTCBSCSEEEECSSSCE-----------------EEEEECTTSSEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCCE-----------------EEEEEeCCCCEEE
Confidence 999999999888888787654322 7799999998664
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.54 E-value=0.11 Score=45.23 Aligned_cols=115 Identities=7% Similarity=0.031 Sum_probs=78.6
Q ss_pred CCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-CCC
Q psy2085 45 PGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT-IEG 123 (358)
Q Consensus 45 ~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs-~DG 123 (358)
......+++.++|.. .++....+.|++||.....+ + .+-++........|++.|+++++++-+ .++
T Consensus 156 ~~~~~~i~~d~~g~i-~v~d~~~~~V~~~d~~G~~~---~---------~~g~~g~~~~P~giavD~~G~i~Vad~~~~~ 222 (279)
T d1q7fa_ 156 LEFPNGVVVNDKQEI-FISDNRAHCVKVFNYEGQYL---R---------QIGGEGITNYPIGVGINSNGEILIADNHNNF 222 (279)
T ss_dssp CSSEEEEEECSSSEE-EEEEGGGTEEEEEETTCCEE---E---------EESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred ccccceeeeccceeE-EeeeccccceeeeecCCcee---e---------eecccccccCCcccccccCCeEEEEECCCCc
Confidence 345788999999974 45666778999999764211 1 111122224567899999999888765 456
Q ss_pred eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-ec-ceEEEECCC
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-SD-DDQAWTKEI 188 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-aD-~IKIWD~~t 188 (358)
.|.++|+ +++.+.++...... ..|..|++.|+|..+++ .+ .|++|....
T Consensus 223 ~v~~f~~-~G~~~~~~~~~~~~---------------~~p~~vav~~dG~l~V~~~n~~v~~fr~~~ 273 (279)
T d1q7fa_ 223 NLTIFTQ-DGQLISALESKVKH---------------AQCFDVALMDDGSVVLASKDYRLYIYRYVQ 273 (279)
T ss_dssp EEEEECT-TSCEEEEEEESSCC---------------SCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred EEEEECC-CCCEEEEEeCCCCC---------------CCEeEEEEeCCCcEEEEeCCCeEEEEEeee
Confidence 8999995 68777777543221 12278999999986665 34 999998764
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.53 E-value=0.0065 Score=58.24 Aligned_cols=127 Identities=11% Similarity=-0.049 Sum_probs=74.2
Q ss_pred CEeEEEEcCCCCEEEEEE--------ecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTG--------IYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG--------~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
.+....|||||++|+... ++.+.+-|||+.+...+........ ...+....|||+|..||.
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~-----------~~~l~~~~wSPDG~~iaf 130 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVS-----------NAKLQYAGWGPKGQQLIF 130 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCC-----------SCCCSBCCBCSSTTCEEE
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccCccCC-----------ccccceeeeccCCceEEE
Confidence 466788999999987653 3456788999987654321111100 034566889999999998
Q ss_pred EeCCCeEEEEeCCCCceeEEEeCCC-CccccccCCCcccccc-CCCceeeEEcCCCCEEEE--ec--ceEEEEC
Q psy2085 119 GTIEGKVEAWDPRMKVKAGTLDCAF-NCISNERDTEEKEGKA-SSDESSEEEEEEEEEEES--SD--DDQAWTK 186 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs~~~i~~L~~~~-~~v~~~~~i~gl~GtR-s~~P~sI~fs~d~~~llS--aD--~IKIWD~ 186 (358)
.. ++.|-+.+..++..+....... ..+... ..+.+.... ......+.|||||++|+. .| .|+.+.+
T Consensus 131 v~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG-~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s~V~~~~~ 202 (465)
T d1xfda1 131 IF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNG-LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMEL 202 (465)
T ss_dssp EE-TTEEEEESSSSSCCEEEECCCBTTTEEEE-ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEE
T ss_pred Ee-cceEEEEecCCCceEEEecccCcceeecc-ccchhhhhhhccccceEEECCCCCeEEEEEecccccceeec
Confidence 66 5778888887776665443221 111000 000000000 000056889999999984 45 5666554
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.23 E-value=0.17 Score=42.35 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=21.4
Q ss_pred eEEcCCCCEEE-Eec-ceEEEECCCCc
Q psy2085 166 EEEEEEEEEEE-SSD-DDQAWTKEIKK 190 (358)
Q Consensus 166 I~fs~d~~~ll-SaD-~IKIWD~~tG~ 190 (358)
..|+|||+.|+ +++ .|.++|+.+|+
T Consensus 238 ~~~SpDG~~I~f~~~~~l~~~d~~~g~ 264 (281)
T d1k32a2 238 RHLNTDGRRILFSKGGSIYIFNPDTEK 264 (281)
T ss_dssp EEEEESSSCEEEEETTEEEEECTTTCC
T ss_pred ccCcCCCCEEEEEeCCEEEEEECCCCC
Confidence 47999999877 578 99999999887
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.18 E-value=0.073 Score=46.82 Aligned_cols=84 Identities=18% Similarity=0.146 Sum_probs=59.8
Q ss_pred eeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 42 FEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 42 fe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
...++.+++++|+|||+.+ +++...+.+.+|+......... ....+ ++. ...|.+++.+++.++++.+.
T Consensus 64 ~~~~~~~~gla~~~dG~l~-v~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~-~~~n~i~~~~~g~~~v~~~~ 132 (302)
T d2p4oa1 64 ATVEGKVSGLAFTSNGDLV-ATGWNADSIPVVSLVKSDGTVE--------TLLTL-PDA-IFLNGITPLSDTQYLTADSY 132 (302)
T ss_dssp EECSSEEEEEEECTTSCEE-EEEECTTSCEEEEEECTTSCEE--------EEEEC-TTC-SCEEEEEESSSSEEEEEETT
T ss_pred EcCCCCcceEEEcCCCCeE-EEecCCceEEEEEeccccccee--------ecccc-CCc-cccceeEEccCCCEEeeccc
Confidence 4577889999999999955 5555667788888654321111 11111 111 56899999999999999999
Q ss_pred CCeEEEEeCCCCcee
Q psy2085 122 EGKVEAWDPRMKVKA 136 (358)
Q Consensus 122 DGtV~iWD~Rs~~~i 136 (358)
++.|..+|+..+...
T Consensus 133 ~~~i~~~~~~~~~~~ 147 (302)
T d2p4oa1 133 RGAIWLIDVVQPSGS 147 (302)
T ss_dssp TTEEEEEETTTTEEE
T ss_pred cccceeeeccCCcce
Confidence 999999999887643
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=96.07 E-value=0.019 Score=48.68 Aligned_cols=98 Identities=9% Similarity=0.027 Sum_probs=57.4
Q ss_pred EEcCC--CCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC-CC-----
Q psy2085 52 RISPD--GQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI-EG----- 123 (358)
Q Consensus 52 ~~SpD--G~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~-DG----- 123 (358)
.+||| |++|+-+. ++.|-+.|+.....+ +-+.. .+.+...+|||+++.||..+. ++
T Consensus 5 ~~sPdi~G~~v~f~~--~~dl~~~d~~~g~~~--~Lt~~------------~~~~~~p~~SPDG~~iaf~~~~~~~~~~~ 68 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC--CDDLWEHDLKSGSTR--KIVSN------------LGVINNARFFPDGRKIAIRVMRGSSLNTA 68 (281)
T ss_dssp CEEEEEETTEEEEEE--TTEEEEEETTTCCEE--EEECS------------SSEEEEEEECTTSSEEEEEEEESTTCCEE
T ss_pred ccCCCCCCCEEEEEe--CCcEEEEECCCCCEE--EEecC------------CCcccCEEECCCCCEEEEEEeeCCCCCce
Confidence 46899 99987654 567888898864322 11111 145678899999998886542 22
Q ss_pred eEEEEeCCCCceeEEEeCCCCcc-ccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 124 KVEAWDPRMKVKAGTLDCAFNCI-SNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 124 tV~iWD~Rs~~~i~~L~~~~~~v-~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
.|.+.+..++.... |....... ...... ..+.|+|+|+.|+.
T Consensus 69 ~i~~~~~~~g~~~~-lt~~~~~~~~~~~~~-----------~~~~~spdg~~l~~ 111 (281)
T d1k32a2 69 DLYFYNGENGEIKR-ITYFSGKSTGRRMFT-----------DVAGFDPDGNLIIS 111 (281)
T ss_dssp EEEEEETTTTEEEE-CCCCCEEEETTEECS-----------EEEEECTTCCEEEE
T ss_pred EEEEEEecCCceEE-eeecCCCccCccccc-----------cccccCCCCCEEEE
Confidence 36666766665432 22111110 000111 56889999998874
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.98 E-value=0.15 Score=44.96 Aligned_cols=107 Identities=11% Similarity=0.025 Sum_probs=74.2
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
..+.+.||||++.+..+.+..+.|..|++........ .+...+..+. +-.+....+++.+++++.++.-..|.|.
T Consensus 149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~----~~~~~~~~~~-~~~g~pdG~~vD~~GnlWva~~~~g~V~ 223 (295)
T d2ghsa1 149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPT----GKAEVFIDST-GIKGGMDGSVCDAEGHIWNARWGEGAVD 223 (295)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBS----SCCEEEEECT-TSSSEEEEEEECTTSCEEEEEETTTEEE
T ss_pred CcceeeecCCCceEEEeecccceeeEeeecccccccc----cceEEEeccC-cccccccceEEcCCCCEEeeeeCCCceE
Confidence 4689999999998888888888999999863211100 0111111111 1114577889999999988877889999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEc-CCCCEEE
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEE-EEEEEEE 176 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs-~d~~~ll 176 (358)
.||+ .++.+..+..+...+ ++++|- ++.+.|+
T Consensus 224 ~~dp-~G~~~~~i~lP~~~~-----------------T~~~FGG~d~~~Ly 256 (295)
T d2ghsa1 224 RYDT-DGNHIARYEVPGKQT-----------------TCPAFIGPDASRLL 256 (295)
T ss_dssp EECT-TCCEEEEEECSCSBE-----------------EEEEEESTTSCEEE
T ss_pred EecC-CCcEeeEecCCCCce-----------------EEEEEeCCCCCEEE
Confidence 9997 578888888765433 778896 5666654
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=95.56 E-value=0.27 Score=43.59 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=44.4
Q ss_pred EeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC----CC
Q psy2085 48 STSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI----EG 123 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~----DG 123 (358)
...+.|.++|+ |..+-...++|..|+....... . .+... ....+.++++|++.++++... .+
T Consensus 42 lEG~~~D~~G~-Ly~~D~~~g~I~ri~p~g~~~~----------~-~~~~~--~~~p~gla~~~dG~l~va~~~~~~~~~ 107 (319)
T d2dg1a1 42 LEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIK----------R-PFVSH--KANPAAIKIHKDGRLFVCYLGDFKSTG 107 (319)
T ss_dssp EEEEEECTTSC-EEEEETTTCEEEEECTTTCCEE----------E-EEECS--SSSEEEEEECTTSCEEEEECTTSSSCC
T ss_pred cEeCEECCCCC-EEEEECCCCEEEEEECCCCeEE----------E-EEeCC--CCCeeEEEECCCCCEEEEecCCCccce
Confidence 36899999998 5566667788888887643211 0 01111 145788888888888776543 23
Q ss_pred eEEEEeCCCC
Q psy2085 124 KVEAWDPRMK 133 (358)
Q Consensus 124 tV~iWD~Rs~ 133 (358)
.|...|...+
T Consensus 108 ~i~~~~~~~~ 117 (319)
T d2dg1a1 108 GIFAATENGD 117 (319)
T ss_dssp EEEEECTTSC
T ss_pred eEEEEcCCCc
Confidence 4555555444
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.28 E-value=0.084 Score=44.46 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC---C
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI---E 122 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~---D 122 (358)
.......|||||++++.+....+...+|-......... .+... .......|+|+|+.|+..+. .
T Consensus 171 ~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~-----------~~~~~--~~~~~p~~SPDG~~i~f~s~~~~~ 237 (269)
T d2hqsa1 171 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-----------VLSST--FLDETPSLAPNGTMVIYSSSQGMG 237 (269)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-----------ECCCS--SSCEEEEECTTSSEEEEEEEETTE
T ss_pred ccccccccccccceeEEEeecCCceeeeEeecccccce-----------EeecC--ccccceEECCCCCEEEEEEcCCCC
Confidence 34567799999999987766555555554432211111 11111 34567789999998876654 3
Q ss_pred CeEEEEeCCCCceeEEEe
Q psy2085 123 GKVEAWDPRMKVKAGTLD 140 (358)
Q Consensus 123 GtV~iWD~Rs~~~i~~L~ 140 (358)
+.+.+||+..+.. ..|.
T Consensus 238 ~~l~~~~~dg~~~-~~lt 254 (269)
T d2hqsa1 238 SVLNLVSTDGRFK-ARLP 254 (269)
T ss_dssp EEEEEEETTSCCE-EECC
T ss_pred cEEEEEECCCCCE-EEEe
Confidence 4678889876654 3343
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.11 E-value=0.099 Score=49.57 Aligned_cols=78 Identities=10% Similarity=0.103 Sum_probs=43.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccC--ceEEEEEeecCCC------CCeeEEEEcCCCCEEEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDS--EVVTFEILSDDYS------SELNSIAINPVHQLICV 118 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~--e~v~f~~LS~D~s------~~In~i~~np~~~llas 118 (358)
.+...+|||||++|+-+ .++.|.+.+....... ....+. ..+ +- --+||. +.-.++-|||++..||+
T Consensus 115 ~l~~~~wSPDG~~iafv--~~~nl~~~~~~~~~~~-~lt~~g~~~~i-~n-G~~d~vyeee~~~~~~a~~WSPDgk~iaf 189 (465)
T d1xfda1 115 KLQYAGWGPKGQQLIFI--FENNIYYCAHVGKQAI-RVVSTGKEGVI-YN-GLSDWLYEEEILKTHIAHWWSPDGTRLAY 189 (465)
T ss_dssp CCSBCCBCSSTTCEEEE--ETTEEEEESSSSSCCE-EEECCCBTTTE-EE-EECCHHHHHTTSSSSEEEEECTTSSEEEE
T ss_pred ccceeeeccCCceEEEE--ecceEEEEecCCCceE-EEecccCccee-ec-cccchhhhhhhccccceEEECCCCCeEEE
Confidence 34568999999998654 3667888777643211 001111 111 10 012221 12257889999999998
Q ss_pred EeC-CCeEEEEe
Q psy2085 119 GTI-EGKVEAWD 129 (358)
Q Consensus 119 Gs~-DGtV~iWD 129 (358)
... +..|..+.
T Consensus 190 ~~~D~s~V~~~~ 201 (465)
T d1xfda1 190 AAINDSRVPIME 201 (465)
T ss_dssp EEEECTTSCEEE
T ss_pred EEecccccceee
Confidence 763 45455543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.92 E-value=0.18 Score=44.43 Aligned_cols=119 Identities=8% Similarity=-0.057 Sum_probs=71.9
Q ss_pred EEEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 39 IQDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 39 iqdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
...+.+|..+.++.+.+||..++++ . ..|.++|..+...+..-..... .-...+|.+.+.|++.+.++
T Consensus 52 ~~~~~~~~~~~~i~~~~dg~l~va~--~-~gl~~~d~~tg~~~~l~~~~~~---------~~~~~~nd~~vd~~G~iw~~ 119 (295)
T d2ghsa1 52 KTVHALPFMGSALAKISDSKQLIAS--D-DGLFLRDTATGVLTLHAELESD---------LPGNRSNDGRMHPSGALWIG 119 (295)
T ss_dssp EEEEECSSCEEEEEEEETTEEEEEE--T-TEEEEEETTTCCEEEEECSSTT---------CTTEEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCcEEEEEecCCCEEEEE--e-CccEEeecccceeeEEeeeecC---------CCcccceeeEECCCCCEEEE
Confidence 3446788889999999999877653 3 3689999886543211111000 00035799999999998776
Q ss_pred EeC----CCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEEECC
Q psy2085 119 GTI----EGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAWTKE 187 (358)
Q Consensus 119 Gs~----DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIWD~~ 187 (358)
... .+.-.+|.+..++....+.....+ +.+.|+++++.++-+| .|..++.+
T Consensus 120 ~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~------------------Ng~~~s~d~~~l~~~dt~~~~I~~~~~d 178 (295)
T d2ghsa1 120 TMGRKAETGAGSIYHVAKGKVTKLFADISIP------------------NSICFSPDGTTGYFVDTKVNRLMRVPLD 178 (295)
T ss_dssp EEETTCCTTCEEEEEEETTEEEEEEEEESSE------------------EEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred eccccccccceeEeeecCCcEEEEeeccCCc------------------ceeeecCCCceEEEeecccceeeEeeec
Confidence 543 223345555455433222211111 7799999999877554 56556653
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=94.61 E-value=0.4 Score=41.32 Aligned_cols=114 Identities=8% Similarity=0.012 Sum_probs=76.1
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVE 126 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~ 126 (358)
....+++.++|+.+++. ....++.+++.+...+ .. +-...+......+++.++++++++....+.|.
T Consensus 115 ~p~~~avd~~G~i~v~~-~~~~~~~~~~~~g~~~---~~---------~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~ 181 (279)
T d1q7fa_ 115 HPRGVTVDNKGRIIVVE-CKVMRVIIFDQNGNVL---HK---------FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK 181 (279)
T ss_dssp CEEEEEECTTSCEEEEE-TTTTEEEEECTTSCEE---EE---------EECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred ccceeccccCCcEEEEe-eccceeeEeccCCcee---ec---------ccccccccccceeeeccceeEEeeecccccee
Confidence 45788888999866544 4556788887553211 11 01111225678899999999999999999999
Q ss_pred EEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE--e-c-ceEEEECCCCc
Q psy2085 127 AWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES--S-D-DDQAWTKEIKK 190 (358)
Q Consensus 127 iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS--a-D-~IKIWD~~tG~ 190 (358)
++|+ +++.+.++..... ...|..|++.++|+.+++ . + .|.+++. +|+
T Consensus 182 ~~d~-~G~~~~~~g~~g~---------------~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~ 232 (279)
T d1q7fa_ 182 VFNY-EGQYLRQIGGEGI---------------TNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQ 232 (279)
T ss_dssp EEET-TCCEEEEESCTTT---------------SCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSC
T ss_pred eeec-CCceeeeeccccc---------------ccCCcccccccCCeEEEEECCCCcEEEEECC-CCC
Confidence 9997 5666666632111 112378999999997775 2 3 6899985 476
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.59 E-value=0.18 Score=43.18 Aligned_cols=108 Identities=7% Similarity=-0.020 Sum_probs=64.8
Q ss_pred eEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeEEEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKVEAW 128 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV~iW 128 (358)
..|++++||...++.....++|..++........ ...... .....|++++++.++++....+.|+++
T Consensus 17 ~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~------------~~~~~~-~~p~gvav~~~g~i~v~d~~~~~i~~~ 83 (260)
T d1rwia_ 17 SGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV------------LPFNGL-YQPQGLAVDGAGTVYVTDFNNRVVTLA 83 (260)
T ss_dssp EEEEECTTCCEEEEECSSSCEEEEEC----CEEE------------CCCCSC-CSCCCEEECTTCCEEEEETTTEEEEEC
T ss_pred CEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEE------------eccCCc-cCceEEEEcCCCCEEEeeeeeceeeee
Confidence 7899999999555544445677777665421110 000100 234678999999999998888899888
Q ss_pred eCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECC
Q psy2085 129 DPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKE 187 (358)
Q Consensus 129 D~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~ 187 (358)
+..+...+........ |..|++.++++..++ . . .+.+++..
T Consensus 84 ~~~~~~~~~~~~~~~~------------------p~~iavd~~g~i~v~d~~~~~~~~~~~~ 127 (260)
T d1rwia_ 84 AGSNNQTVLPFDGLNY------------------PEGLAVDTQGAVYVADRGNNRVVKLAAG 127 (260)
T ss_dssp TTCSCCEECCCCSCCS------------------EEEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eeccceeeeeeeeeee------------------cccccccccceeEeeccccccccccccc
Confidence 7666544432222222 277888888876554 2 2 45555554
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.50 E-value=0.36 Score=41.11 Aligned_cols=113 Identities=6% Similarity=-0.020 Sum_probs=72.0
Q ss_pred CCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCCCeE
Q psy2085 46 GVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIEGKV 125 (358)
Q Consensus 46 ~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~DGtV 125 (358)
...+.|++.++|... ++-....++.+++.....+.... ..+. ...+.|+++|++.++++...++.|
T Consensus 98 ~~p~~iavd~~g~i~-v~d~~~~~~~~~~~~~~~~~~~~------------~~~~-~~p~~i~~~~~g~~~v~~~~~~~i 163 (260)
T d1rwia_ 98 NYPEGLAVDTQGAVY-VADRGNNRVVKLAAGSKTQTVLP------------FTGL-NDPDGVAVDNSGNVYVTDTDNNRV 163 (260)
T ss_dssp CSEEEEEECTTCCEE-EEEGGGTEEEEECTTCSSCEECC------------CCSC-CSCCEEEECTTCCEEEEEGGGTEE
T ss_pred eecccccccccceeE-eeccccccccccccccceeeeee------------eccc-CCcceeeecCCCCEeeeccccccc
Confidence 346889999999855 44455667777776543221110 0011 345789999999999998999999
Q ss_pred EEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE-e-c-ceEEEECCCC
Q psy2085 126 EAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES-S-D-DDQAWTKEIK 189 (358)
Q Consensus 126 ~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS-a-D-~IKIWD~~tG 189 (358)
..+|+............. ..|..|++.++|.+.++ . . .|..++...+
T Consensus 164 ~~~d~~~~~~~~~~~~~~-----------------~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~ 213 (260)
T d1rwia_ 164 VKLEAESNNQVVLPFTDI-----------------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 213 (260)
T ss_dssp EEECTTTCCEEECCCSSC-----------------CSEEEEEECTTCCEEEEETTTTEEEEECTTCS
T ss_pred cccccccceeeeeecccc-----------------CCCccceeeeeeeeeeeecCCCEEEEEeCCCC
Confidence 999987654332111111 11277999999987666 2 2 5666666543
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=93.55 E-value=0.061 Score=51.37 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=65.4
Q ss_pred EEeeCCCCEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCc-eEEEEEeecCCCCCeeEEEEcCCCCEEEE
Q psy2085 40 QDFEMPGVSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSE-VVTFEILSDDYSSELNSIAINPVHQLICV 118 (358)
Q Consensus 40 qdfe~~~~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e-~v~f~~LS~D~s~~In~i~~np~~~llas 118 (358)
....-|..-..|.+||||+|++++|.-+++|.|+|+..+..-+....+.. ++-. .+.-.-+=..-+|...+....|
T Consensus 269 ~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~---e~elglgPLht~fd~~g~ayts 345 (459)
T d1fwxa2 269 RYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA---EPELGLGPLHTAFDGRGNAYTS 345 (459)
T ss_dssp EEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEE---CCBCCSCEEEEEECTTSEEEEE
T ss_pred EEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEe---ecccCcCccccccCCCceEEEE
Confidence 33444556678999999999999999999999999975422121111111 1100 0100023356678787766666
Q ss_pred EeCCCeEEEEeCCC----------CceeEEEeCCCCc
Q psy2085 119 GTIEGKVEAWDPRM----------KVKAGTLDCAFNC 145 (358)
Q Consensus 119 Gs~DGtV~iWD~Rs----------~~~i~~L~~~~~~ 145 (358)
---|..|--|++.. ...+..++.|.++
T Consensus 346 lfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~ 382 (459)
T d1fwxa2 346 LFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 382 (459)
T ss_dssp ETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred eeccceEEEEecchhhhhhccccCCcceeccccccCC
Confidence 66899999999732 2446778877665
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=91.63 E-value=1.2 Score=39.23 Aligned_cols=78 Identities=4% Similarity=-0.068 Sum_probs=47.4
Q ss_pred EeEEEEcCCCCEEEEEEe------cCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeC
Q psy2085 48 STSVRISPDGQYVLSTGI------YKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTI 121 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~------~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~ 121 (358)
...++|.|||+..+++.. -.++|..||..+............. ..+.-+.++|.++++++.++..
T Consensus 20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~---------~~g~P~Gl~~~~dg~~l~vad~ 90 (314)
T d1pjxa_ 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNG---------YGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETT---------EECCEEEEEECSSSSEEEEEET
T ss_pred CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCcccc---------CCCcceeEEEeCCCCEEEEEEC
Confidence 356799999997655421 1357888887764322111100000 0023578999999987777666
Q ss_pred CCeEEEEeCCCCc
Q psy2085 122 EGKVEAWDPRMKV 134 (358)
Q Consensus 122 DGtV~iWD~Rs~~ 134 (358)
.+.|...|+..+.
T Consensus 91 ~~~i~~~~~~g~~ 103 (314)
T d1pjxa_ 91 RLGLLVVQTDGTF 103 (314)
T ss_dssp TTEEEEEETTSCE
T ss_pred CCeEEEEeCCCcE
Confidence 6678888876553
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=86.14 E-value=2.6 Score=39.68 Aligned_cols=98 Identities=12% Similarity=0.091 Sum_probs=62.8
Q ss_pred EEEEcC---CCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcC--CCCEEEEEeCCC-
Q psy2085 50 SVRISP---DGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINP--VHQLICVGTIEG- 123 (358)
Q Consensus 50 ~v~~Sp---DG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np--~~~llasGs~DG- 123 (358)
.+.++. ||+||++.-...++|-+-|+..+ ++.....- |.. .++..+...+ ...++++++++.
T Consensus 89 ~~S~TdGtyDGrylFVNDkan~RVAvIdl~~f--kt~kIi~i---------Pn~-~~~HG~r~~~~p~T~YV~~~~e~~v 156 (459)
T d1fwxa2 89 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVM--KCDAILEI---------PNA-KGIHGLRPQKWPRSNYVFCNGEDET 156 (459)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTT--EEEEEEEC---------SSC-CSEEEEEECCSSBCSEEEEEECSCE
T ss_pred cccccCCccceeEEEEEcCCCceEEEEECcce--eeeEEEec---------CCC-CCCceeecccCCCeEEEEccCcccc
Confidence 455555 99999999888999999999864 22221111 111 3455555543 445677766633
Q ss_pred -----------------eEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEE
Q psy2085 124 -----------------KVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEES 177 (358)
Q Consensus 124 -----------------tV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llS 177 (358)
++.++|..+.+....+.....+ ..+.++++|+++++
T Consensus 157 P~pndg~~l~d~~~y~~~~t~ID~~tm~V~~QV~V~g~l------------------d~~~~s~dGK~af~ 209 (459)
T d1fwxa2 157 PLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNL------------------DNCDADYEGKWAFS 209 (459)
T ss_dssp ESSCSSSSTTCGG-EEEEEEEEETTTTEEEEEEEESSCC------------------CCEEECSSSSEEEE
T ss_pred ccCCCCccccchhhcceEEEEEecCCceEEEEeeeCCCh------------------hccccCCCCCEEEE
Confidence 3677888877766555543332 45888899888874
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=85.03 E-value=6.2 Score=34.07 Aligned_cols=115 Identities=9% Similarity=0.054 Sum_probs=66.0
Q ss_pred eEEEEcCCCCEEEEEEecCC-----------eEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEE
Q psy2085 49 TSVRISPDGQYVLSTGIYKP-----------RVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLIC 117 (358)
Q Consensus 49 ~~v~~SpDG~~LlatG~~d~-----------~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~lla 117 (358)
.......||+.++ -|++.+ .+.+||..+.+-...... ..+ ......++++.+++.+++
T Consensus 23 ~~a~~~~~gkv~v-~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~---------~~~-~~~~~~~~~~~~~g~i~v 91 (387)
T d1k3ia3 23 AAAIEPTSGRVLM-WSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVT---------VTK-HDMFCPGISMDGNGQIVV 91 (387)
T ss_dssp EEEEETTTTEEEE-EEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEE---------ECS-CCCSSCEEEECTTSCEEE
T ss_pred EEEEEeeCCEEEE-EEeecCcccCCCCCceeEEEEEECCCCcEeecCCC---------CCC-cccceeEEEEecCCcEEE
Confidence 4455667887554 454432 367899876432110000 000 001234567889999999
Q ss_pred EEeCC-CeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEe-------c--ceEEEECC
Q psy2085 118 VGTIE-GKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESS-------D--DDQAWTKE 187 (358)
Q Consensus 118 sGs~D-GtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSa-------D--~IKIWD~~ 187 (358)
.|+.+ .++.+||+.+..-...-..+..... ...+..+||..++.. . .+.+||..
T Consensus 92 ~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~----------------~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~ 155 (387)
T d1k3ia3 92 TGGNDAKKTSLYDSSSDSWIPGPDMQVARGY----------------QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 155 (387)
T ss_dssp ECSSSTTCEEEEEGGGTEEEECCCCSSCCSS----------------CEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred eecCCCcceeEecCccCcccccccccccccc----------------cceeeecCCceeeeccccccccccceeeeecCC
Confidence 99765 6899999988765321111110000 346677788877641 1 68899998
Q ss_pred CCc
Q psy2085 188 IKK 190 (358)
Q Consensus 188 tG~ 190 (358)
+.+
T Consensus 156 ~~~ 158 (387)
T d1k3ia3 156 SKT 158 (387)
T ss_dssp TTE
T ss_pred CCc
Confidence 775
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=83.77 E-value=13 Score=32.74 Aligned_cols=108 Identities=8% Similarity=-0.002 Sum_probs=61.7
Q ss_pred EEEcCCCCEEEEEEe---cCCeEEEEEcCCCc--eeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEe-----
Q psy2085 51 VRISPDGQYVLSTGI---YKPRVRCYETDNLS--MKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGT----- 120 (358)
Q Consensus 51 v~~SpDG~~LlatG~---~d~~IrvwDl~~ls--lk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs----- 120 (358)
+.-.+||++.+..-. ...+|.+|++...+ +.+.++...+ .....|.|++..++.+++|=.
T Consensus 104 l~~~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~----------~~~~pNDv~~~~~g~fy~Tnd~~~~~ 173 (340)
T d1v04a_ 104 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK----------LLPSVNDIVAVGPEHFYATNDHYFID 173 (340)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT----------TCSSEEEEEEEETTEEEEEESCSCCS
T ss_pred EEEcCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCCc----------cccCccceEEecCCCEEEecCccCcC
Confidence 344678885443322 34579999986432 3333332211 114579999988888888721
Q ss_pred ------------CCCeEEEEeCCCCceeEEEeCCCCccccccCCCccccccCCCceeeEEcCCCCEEEEec----ceEEE
Q psy2085 121 ------------IEGKVEAWDPRMKVKAGTLDCAFNCISNERDTEEKEGKASSDESSEEEEEEEEEEESSD----DDQAW 184 (358)
Q Consensus 121 ------------~DGtV~iWD~Rs~~~i~~L~~~~~~v~~~~~i~gl~GtRs~~P~sI~fs~d~~~llSaD----~IKIW 184 (358)
.-|.|-.||....+. ..++-.. |+.|+++|++++|+-++ .|++|
T Consensus 174 ~~~~~~e~~~~~~~g~v~~~~~~~~~~--~~~~l~~------------------pNGI~~s~d~~~lyVa~t~~~~i~~y 233 (340)
T d1v04a_ 174 PYLKSWEMHLGLAWSFVTYYSPNDVRV--VAEGFDF------------------ANGINISPDGKYVYIAELLAHKIHVY 233 (340)
T ss_dssp HHHHHHHHHTTCCCEEEEEECSSCEEE--EEEEESS------------------EEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred hhhhhhhHhhcCCceeEEEEcCCceEE--EcCCCCc------------------cceeEECCCCCEEEEEeCCCCeEEEE
Confidence 123455555432221 1221111 17899999999887433 88888
Q ss_pred ECCC
Q psy2085 185 TKEI 188 (358)
Q Consensus 185 D~~t 188 (358)
++..
T Consensus 234 ~~~~ 237 (340)
T d1v04a_ 234 EKHA 237 (340)
T ss_dssp EECT
T ss_pred EeCC
Confidence 8763
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.54 E-value=7.6 Score=35.07 Aligned_cols=58 Identities=10% Similarity=0.028 Sum_probs=36.8
Q ss_pred EeEEEEcCCCCEEEEEEecC----CeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEE
Q psy2085 48 STSVRISPDGQYVLSTGIYK----PRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVG 119 (358)
Q Consensus 48 v~~v~~SpDG~~LlatG~~d----~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasG 119 (358)
+..+++||||++++.+-+.. .+|+++|+.+.... ...+-. .....++|.++++.|.-.
T Consensus 127 ~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~----------~~~i~~----~~~~~~~W~~D~~~~~Y~ 188 (430)
T d1qfma1 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL----------PDVLER----VKFSCMAWTHDGKGMFYN 188 (430)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE----------EEEEEE----ECSCCEEECTTSSEEEEE
T ss_pred ecceEecCCCCEEEEEeccccCchheeEEeccCcceec----------cccccc----ccccceEEcCCCCEEEEE
Confidence 44678999999988664433 47999999975321 111100 112568899998866543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=81.29 E-value=2.1 Score=37.32 Aligned_cols=77 Identities=17% Similarity=0.194 Sum_probs=49.4
Q ss_pred CEeEEEEcCCCCEEEEEEecCCeEEEEEcCCCceeeeeeccCceEEEEEeecCCCCCeeEEEEcCCCCEEEEEeCC----
Q psy2085 47 VSTSVRISPDGQYVLSTGIYKPRVRCYETDNLSMKFERCFDSEVVTFEILSDDYSSELNSIAINPVHQLICVGTIE---- 122 (358)
Q Consensus 47 ~v~~v~~SpDG~~LlatG~~d~~IrvwDl~~lslk~~r~~d~e~v~f~~LS~D~s~~In~i~~np~~~llasGs~D---- 122 (358)
.+..+.+.+||+.++..|.....+.+||..+.. +....+.. .+ ..-.+++..+++.+++.|+.+
T Consensus 77 ~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~--w~~~~~~~-------~~---r~~~~~~~~~dG~v~v~GG~~~~~~ 144 (387)
T d1k3ia3 77 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS--WIPGPDMQ-------VA---RGYQSSATMSDGRVFTIGGSWSGGV 144 (387)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE--EEECCCCS-------SC---CSSCEEEECTTSCEEEECCCCCSSS
T ss_pred ceeEEEEecCCcEEEeecCCCcceeEecCccCc--cccccccc-------cc---ccccceeeecCCceeeecccccccc
Confidence 345678999998765444444689999987542 11111100 00 122456777889999998753
Q ss_pred --CeEEEEeCCCCce
Q psy2085 123 --GKVEAWDPRMKVK 135 (358)
Q Consensus 123 --GtV~iWD~Rs~~~ 135 (358)
..|++||+.+++-
T Consensus 145 ~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 145 FEKNGEVYSPSSKTW 159 (387)
T ss_dssp CCCCEEEEETTTTEE
T ss_pred ccceeeeecCCCCce
Confidence 3699999998763
|