Psyllid ID: psy2273

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430----
Protein Sequence
MQKPVKRTMSKSRGVSTHSLETLEECPHTSTQSITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNFANNVVSTEKIR
Secondary Structure (PSIPRED)
cccccHHHcccccccccccccccccccccccccEEEEcccccccEEEEEccccccccccccccccccEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEccEEEccEEEEEEEcccccccccEEEEEEEcccccEEEEEEEEEccccEEEEEEEcccccccccccccccccccccEEEEEEEEccccEEEcccccccEEEccccEEEEEcccccccccEEEEEEEccEEEEEEcccEEEEEEEccccccccccccccccHHHHHHHHHHHHccccccccccccccccccEEEccccccccccccccEEEccccccccccccccccccHHEEEEEEEEEEEcccccccccHHHHHcccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccEEEcccc
Secondary Structure Prediction (SSPRO)
ccccccEccEcccccEEccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccEEEEEEEEEccccEEEEEccEEEEEEEEEEccccccccccEEEEEEcHHcccccEEEEEEEEEEEEcccEEEEEEEccccEEEEEEEccccHHHHHHcccccccccEEEEEEEEEEccccEEEcccccEcEEcccccEEEEccccccccEEEEEEEEEcccEEEEccccEEEEEEEcHHHHHHHcccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccHccccccccccccccEEEEEEEEcHHHHHHHcccEEEEEEHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHcccccccccccccccccHHHHcHHHHHHcccccccccccEcccccc
Coil and Loop (DISEMBL)
mqkpvkrtmsksrgvsthsletleecphtstqsitevnlccrgsvrfqstsidgVHYVWtqlrpathyqvdltggtyqpylsglpdsdLLALVLSThevqsqssvevgqsfvnpnvvpifdghsglpdsdllALDVFEKVAAKFFEHCSKRLWVSERYVAstvfepnlarnvfpcfdephfKAYFSLMirrphhmsslsnmpllktaedgesrvdhfqesmpmspyllCFTVGsfesltlwdnsiqykvyaprndstswtknpdgstwenarnstsswtknldrttwdniekgpqnyssswtnkpagswenaiqkssqndssswtknpnsifsdkSQYALVKNLmsvpgsnkpagswenAIQKssqndssswtknpnstfsdksqYALGHniaegswpipvpsnkavkrlpsekfderswtnfannvvstekir
Flexible Loop (DISEMBL)
mqkpvkrtmsksrgvsthsletleecphtstqsiteVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKvyaprndstswtknpdgstwenarnstsswtknldrttwdniekgpqnyssswtnKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPIPVPSNKAVKRlpsekfderswtnfannvvstekir
Low Complexity Region (SEG)
MQKPVKRTMSKSRGVSTHSLETLEECPHTSTQSITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEvqsqssvevgqsfvNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNFANNVVSTEKIR
Disordered region (IsUnstruct)
********************************SITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQ***SVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR********************************SPYLLCFTVGSFESLTLWDNSIQYKVYAP*******************************************************************************************************************************************I******************************************
Disordered Region (DISOPRED)
******************************TQSITEVNLCCRG*V****TSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTK************ALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPI*V************KFDERSWTNFANNVV*TE***
Disordered Region (DISEMBL)
*********************************ITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENA*************KNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENA*****************STFSDKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNFANNVVSTEKIR
Disordered Region (DISPRO)
*****KRTMSKSRGVSTHSLETLEECPHT****************RFQS**IDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNF***********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQKPVKRTMSKSRGVSTHSLETLEECPHTSTQSITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNFANNVVSTEKIR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	434	2.2.26 [Sep-21-2011]
Q9NZ08	941	Endoplasmic reticulum ami	yes	N/A	0.216	0.099	0.479	4e-17
Q6P179	960	Endoplasmic reticulum ami	no	N/A	0.248	0.112	0.436	5e-16
Q9JJ22	930	Endoplasmic reticulum ami	yes	N/A	0.216	0.101	0.438	3e-15
A6QPT7	954	Endoplasmic reticulum ami	no	N/A	0.248	0.113	0.428	3e-15
Q9EQH2	930	Endoplasmic reticulum ami	yes	N/A	0.216	0.101	0.438	4e-15
Q5RFP3	960	Endoplasmic reticulum ami	no	N/A	0.248	0.112	0.409	5e-15
Q8C129	1025	Leucyl-cystinyl aminopept	no	N/A	0.218	0.092	0.469	8e-15
P97629	1025	Leucyl-cystinyl aminopept	no	N/A	0.211	0.089	0.462	6e-14
Q9UIQ6	1025	Leucyl-cystinyl aminopept	no	N/A	0.218	0.092	0.438	9e-14
Q96ZT9	786	Probable aminopeptidase 1	yes	N/A	0.188	0.104	0.426	5e-13

>sp|Q9NZ08|ERAP1_HUMAN Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3

 Score = 89.7 bits (221), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 233

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Strongly prefers substrates 9-16 residues long. Rapidly degrades 13-mer to a 9-mer and then stops. Preferentially hydrolyzes the residue Leu and peptides with a hydrophobic C-terminus, while it has weak activity toward peptides with charged C-terminus. May play a role in the inactivation of peptide hormones. May be involved in the regulation of blood pressure through the inactivation of angiotensin II and/or the generation of bradykinin in the kidney.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: -

>sp|Q6P179|ERAP2_HUMAN Endoplasmic reticulum aminopeptidase 2 OS=Homo sapiens GN=ERAP2 PE=1 SV=2

 Score = 85.9 bits (211), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
           F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238

Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
           +KT E +G    DHF+ ++ MS YL+ + V  F SL+ + +S ++  +YA
Sbjct: 239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9JJ22|ERAP1_RAT Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus GN=Erap1 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +A+T FEP  AR  FPCFDEP  KA FS+ I+R P H+ ++SNMPL+K+    E  + 
Sbjct: 164 RILAATQFEPTAARMAFPCFDEPALKASFSIKIKRDPRHL-AISNMPLVKSVTVAEGLIE 222

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  F+S++ +  + ++  VYA
Sbjct: 223 DHFDITVKMSTYLVAFIISDFKSVSKMTKSGVKVSVYA 260

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Strongly prefers substrates 9-16 residues long. Rapidly degrades 13-mer to a 9-mer and then stops. Preferentially hydrolyzes the residue Leu and peptides with a hydrophobic C-terminus, while it has weak activity toward peptides with charged C-terminus. May play a role in the inactivation of peptide hormones. May be involved in the regulation of blood pressure through the inactivation of angiotensin II and/or the generation of bradykinin in the kidney.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|A6QPT7|ERAP2_BOVIN Endoplasmic reticulum aminopeptidase 2 OS=Bos taurus GN=ERAP2 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 132 LALDVFEKVA---AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLM 188
           +A+D   K+A     F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ 
Sbjct: 158 VAIDFQAKLADGFEGFYKSTYRTLGGETRTIAVTDFEPTEARMAFPCFDEPLFKANFSIK 217

Query: 189 IRRPHHMSSLSNMPLLKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLT 239
           IRR     +LSNMP +KT E +G    DHF+ ++ MS YL+ + V  F S++
Sbjct: 218 IRRESRHIALSNMPKVKTIELEGGLLEDHFETTVRMSTYLVAYIVCDFTSVS 269

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9EQH2|ERAP1_MOUSE Endoplasmic reticulum aminopeptidase 1 OS=Mus musculus GN=Erap1 PE=2 SV=2

 Score = 83.2 bits (204), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +A+T FEP  AR  FPCFDEP  KA FS+ I+R P H+ ++SNMPL+K+    E  + 
Sbjct: 164 RILAATQFEPTAARMAFPCFDEPALKASFSIKIKRDPRHL-AISNMPLVKSVNVAEGLIE 222

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  F+S++ +  + ++  VYA
Sbjct: 223 DHFDITVKMSTYLVAFIISDFKSVSKMTKSGVKVSVYA 260

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Strongly prefers substrates 9-16 residues long. Rapidly degrades 13-mer to a 9-mer and then stops. Preferentially hydrolyzes the residue Leu and peptides with a hydrophobic C-terminus, while it has weak activity toward peptides with charged C-terminus. May play a role in the inactivation of peptide hormones. May be involved in the regulation of blood pressure through the inactivation of angiotensin II and/or the generation of bradykinin in the kidney.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q5RFP3|ERAP2_PONAB Endoplasmic reticulum aminopeptidase 2 OS=Pongo abelii GN=ERAP2 PE=2 SV=1

 Score = 82.8 bits (203), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 2/110 (1%)

Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
           F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESGHIALSNMPK 238

Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           ++T E +G    DHF+ ++ MS YL+ + V  F S++ +  + ++  +YA
Sbjct: 239 VRTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSVSGITSSGVKVSIYA 288

Aminopeptidase that plays a central role in peptide trimming, a step required for the generation of most HLA class I-binding peptides. Peptide trimming is essential to customize longer precursor peptides to fit them to the correct length required for presentation on MHC class I molecules. Preferentially hydrolyzes the basic residues Arg and Lys.

Pongo abelii (taxid: 9601)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q8C129|LCAP_MOUSE Leucyl-cystinyl aminopeptidase OS=Mus musculus GN=Lnpep PE=1 SV=1

 Score = 82.0 bits (201), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 3/98 (3%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT--AEDGESR 213
           ++Y A+T FEP  AR+ FPCFDEP FKA F + I R  H ++LSNMP   +  AE+G  +
Sbjct: 286 KKYFAATQFEPLAARSAFPCFDEPAFKATFIIKITRNEHHTALSNMPKKSSVPAEEGLIQ 345

Query: 214 VDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYA 251
            D F ES+ MS YL+ F VG   +L+   N     VYA
Sbjct: 346 -DEFSESVKMSTYLVAFIVGEMRNLSQDVNGTLVSVYA 382

Release of an N-terminal amino acid, cleave before cysteine, leucine as well as other amino acids. Degrades peptide hormones such as oxytocin, vasopressin and angiotensin III, and plays a role in maintaining homeostasis during pregnancy. May be involved in the inactivation of neuronal peptides in the brain. Cleaves Met-enkephalin and dynorphin. Binds angiotensin IV and may be the angiotensin IV receptor in the brain.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 3

>sp|P97629|LCAP_RAT Leucyl-cystinyl aminopeptidase OS=Rattus norvegicus GN=Lnpep PE=1 SV=1

 Score = 79.0 bits (193), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 1/93 (1%)

Query: 160 ASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRV-DHFQ 218
           A+T FEP  AR+ FPCFDEP FKA F + I R  H ++LSNMP   +    E  + D F 
Sbjct: 290 AATQFEPLAARSAFPCFDEPAFKATFIIKITRDEHHTALSNMPKKSSVPTEEGLIQDEFS 349

Query: 219 ESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYA 251
           ES+ MS YL+ F VG   +L+   N     VYA
Sbjct: 350 ESVKMSTYLVAFIVGEMRNLSQDVNGTLVSVYA 382

Release of an N-terminal amino acid, cleave before cysteine, leucine as well as other amino acids. Degrades peptide hormones such as oxytocin, vasopressin and angiotensin III, and plays a role in maintaining homeostasis during pregnancy. May be involved in the inactivation of neuronal peptides in the brain. Cleaves Met-enkephalin and dynorphin. Binds angiotensin IV and may be the angiotensin IV receptor in the brain.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 3

>sp|Q9UIQ6|LCAP_HUMAN Leucyl-cystinyl aminopeptidase OS=Homo sapiens GN=LNPEP PE=1 SV=3

 Score = 78.6 bits (192), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTA--EDGESR 213
           ++Y A+T FEP  AR+ FPCFDEP FKA F + I R    ++LSNMP   +   +DG  +
Sbjct: 286 KKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNMPKKSSVVLDDGLVQ 345

Query: 214 VDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYA 251
            D F ES+ MS YL+ F VG  ++L+   N     +YA
Sbjct: 346 -DEFSESVKMSTYLVAFIVGEMKNLSQDVNGTLVSIYA 382

Release of an N-terminal amino acid, cleaves before cysteine, leucine as well as other amino acids. Degrades peptide hormones such as oxytocin, vasopressin and angiotensin III, and plays a role in maintaining homeostasis during pregnancy. May be involved in the inactivation of neuronal peptides in the brain. Cleaves Met-enkephalin and dynorphin. Binds angiotensin IV and may be the angiotensin IV receptor in the brain.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 3

>sp|Q96ZT9|APE1_SULTO Probable aminopeptidase 1 OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=ape1 PE=3 SV=1

 Score = 76.3 bits (186), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 46/82 (56%)

Query: 158 YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHF 217
           Y+ +T FEP  AR   PCFD P  KA F L +R       +SNMP++   +DGE  V  F
Sbjct: 96  YLITTQFEPIYARKFIPCFDSPDMKAVFKLSVRVNRGQKVISNMPIISIRDDGEKIVYEF 155

Query: 218 QESMPMSPYLLCFTVGSFESLT 239
            E+  MS YLL   +G FE ++
Sbjct: 156 DETPRMSTYLLYLGIGDFEEIS 177

Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (taxid: 273063)

EC: 3

EC: .

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
242016965	987	Aminopeptidase N precursor, putative [Pe	0.209	0.092	0.452	2e-15
195394924	1017	GJ10417 [Drosophila virilis] gi|19414279	0.218	0.093	0.436	2e-15
334325772	941	PREDICTED: endoplasmic reticulum aminope	0.216	0.099	0.479	2e-15
402872144	941	PREDICTED: endoplasmic reticulum aminope	0.216	0.099	0.479	2e-15
94818901	948	endoplasmic reticulum aminopeptidase 1 i	0.216	0.099	0.479	3e-15
20521069	951	KIAA0525 protein [Homo sapiens]	0.216	0.098	0.479	3e-15
397494219	948	PREDICTED: endoplasmic reticulum aminope	0.216	0.099	0.479	3e-15
327200570	921	Chain A, Er Aminopeptidase, Erap1, Bound	0.216	0.102	0.479	3e-15
328877128	897	Chain A, Crystal Structure Of The Solubl	0.216	0.104	0.479	3e-15
158256704	941	unnamed protein product [Homo sapiens]	0.216	0.099	0.479	3e-15

>gi|242016965|ref|XP_002428965.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis] gi|212513794|gb|EEB16227.1| Aminopeptidase N precursor, putative [Pediculus humanus corporis]

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 4/95 (4%)

Query: 155 SERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRV 214
           ++R++A+T F+   AR  FPCFDEP  KA F + I RP +MSS+SNMPL KT E  +   
Sbjct: 215 TKRWIATTQFQATDARRAFPCFDEPEMKAKFKINIGRPKNMSSISNMPLNKTGEPVQGLE 274

Query: 215 DH----FQESMPMSPYLLCFTVGSFESLTLWDNSI 245
           D+    F+ES+PMS YL+ F V  F ++T +++++
Sbjct: 275 DYVWDEFEESLPMSTYLVAFVVSDFANITNFNDTV 309

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195394924|ref|XP_002056089.1| GJ10417 [Drosophila virilis] gi|194142798|gb|EDW59201.1| GJ10417 [Drosophila virilis]

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 8/103 (7%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRP----HHMSSLSNMPLLKTAEDGE 211
           +R++AST  EP  AR  FPCFDEPH KA F++ I RP    +H+  LSNMP+     DG+
Sbjct: 259 KRWIASTKLEPTYARQAFPCFDEPHLKAQFAITIARPSGDDYHV--LSNMPVASEYIDGD 316

Query: 212 SRVDHFQESMPMSPYLLCFTVGSFE--SLTLWDNSIQYKVYAP 252
                F+E++PMS YL  F +  F   + T+ D +I+ +V+AP
Sbjct: 317 LTEVTFEETLPMSTYLAAFVISDFAHTTTTVGDTNIELRVFAP 359

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|334325772|ref|XP_001363584.2| PREDICTED: endoplasmic reticulum aminopeptidase 1 [Monodelphis domestica]

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 176 RILASTQFEPTAARMAFPCFDEPAFKANFSIKIRREPRHL-AISNMPLVKSVNIAEGLIE 234

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 235 DHFDVTVKMSTYLVAFIISDFESVSKMTKSGVKVSVYA 272

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402872144|ref|XP_003899994.1| PREDICTED: endoplasmic reticulum aminopeptidase 1 isoform 1 [Papio anubis] gi|402872146|ref|XP_003899995.1| PREDICTED: endoplasmic reticulum aminopeptidase 1 isoform 2 [Papio anubis]

 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 233

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|94818901|ref|NP_057526.3| endoplasmic reticulum aminopeptidase 1 isoform a precursor [Homo sapiens]

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 233

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|20521069|dbj|BAA25451.2| KIAA0525 protein [Homo sapiens]

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 178 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 236

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 237 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 274

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397494219|ref|XP_003817982.1| PREDICTED: endoplasmic reticulum aminopeptidase 1 [Pan paniscus]

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 233

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|327200570|pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin gi|327200571|pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin gi|327200572|pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 139 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 197

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 198 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 235

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328877128|pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 130 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 188

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 189 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 226

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|158256704|dbj|BAF84325.1| unnamed protein product [Homo sapiens]

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 233

Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	434
UNIPROTKB|Q9NZ08	941	ERAP1 "Endoplasmic reticulum a	0.216	0.099	0.479	3.9e-15
UNIPROTKB|E2R302	942	ERAP1 "Uncharacterized protein	0.216	0.099	0.479	4.8e-15
UNIPROTKB|F1NRS5	391	ERAP1 "Uncharacterized protein	0.214	0.237	0.474	7.9e-15
UNIPROTKB|F1RNU0	313	LOC100525036 "Uncharacterized	0.276	0.383	0.408	1.5e-14
UNIPROTKB|F1NB92	799	ERAP1 "Uncharacterized protein	0.214	0.116	0.474	4e-14
UNIPROTKB|D6RGW0	694	ERAP2 "Endoplasmic reticulum a	0.248	0.155	0.436	4.1e-14
UNIPROTKB|K7GLU6	863	K7GLU6 "Uncharacterized protei	0.216	0.108	0.5	4.3e-14
UNIPROTKB|F1RNU1	947	F1RNU1 "Uncharacterized protei	0.216	0.099	0.5	5.7e-14
UNIPROTKB|Q6P179	960	ERAP2 "Endoplasmic reticulum a	0.248	0.112	0.436	6.7e-14
UNIPROTKB|F1MU34	942	ERAP1 "Uncharacterized protein	0.285	0.131	0.406	1.8e-13

UNIPROTKB|Q9NZ08 ERAP1 "Endoplasmic reticulum aminopeptidase 1" [Homo sapiens (taxid:9606)]

 Score = 223 (83.6 bits), Expect = 3.9e-15, P = 3.9e-15
 Identities = 47/98 (47%), Positives = 65/98 (66%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H++ +SNMPL+K+    E  + 
Sbjct:   175 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLA-ISNMPLVKSVTVAEGLIE 233

Query:   215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
             DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct:   234 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 271

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0004177 "aminopeptidase activity" evidence=IDA

GO:0005829 "cytosol" evidence=NAS

GO:0045444 "fat cell differentiation" evidence=NAS

GO:0008270 "zinc ion binding" evidence=NAS

GO:0008217 "regulation of blood pressure" evidence=NAS;TAS

GO:0005138 "interleukin-6 receptor binding" evidence=IPI

GO:0008235 "metalloexopeptidase activity" evidence=IDA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IDA

GO:0005576 "extracellular region" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=NAS

GO:0019885 "antigen processing and presentation of endogenous peptide antigen via MHC class I" evidence=NAS;TAS

GO:0016021 "integral to membrane" evidence=NAS

GO:0045088 "regulation of innate immune response" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

GO:0001525 "angiogenesis" evidence=TAS

GO:0005151 "interleukin-1, Type II receptor binding" evidence=TAS

GO:0005788 "endoplasmic reticulum lumen" evidence=TAS

GO:0002474 "antigen processing and presentation of peptide antigen via MHC class I" evidence=TAS

GO:0009617 "response to bacterium" evidence=IEP

UNIPROTKB|E2R302 ERAP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 223 (83.6 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
 Identities = 47/98 (47%), Positives = 65/98 (66%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H++ +SNMPL+K+    E  + 
Sbjct:   176 RVLASTHFEPTAARMAFPCFDEPAFKANFSVKIRREPRHVA-ISNMPLVKSVTVAEGLLE 234

Query:   215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
             DHF  ++ MS YL+ F +  FES++ +  N ++  +YA
Sbjct:   235 DHFDVTVKMSTYLVAFIISDFESISKMTKNGVKVSIYA 272

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005138 "interleukin-6 receptor binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|F1NRS5 ERAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 7.9e-15, P = 7.9e-15
 Identities = 46/97 (47%), Positives = 64/97 (65%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R +AST FEP  AR  FPCFDEP FKA FS+ IRR P+H++ LSNMPL+K+       V 
Sbjct:    30 RVLASTHFEPTSARMAFPCFDEPAFKAMFSVKIRREPYHLA-LSNMPLVKSVNIASWLVE 88

Query:   215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVY 250
             DHF  ++ MS YL+ F V  F+S++ +  + ++  +Y
Sbjct:    89 DHFDTTVKMSTYLVAFIVSDFKSISKVTSHGVKISIY 125

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005138 "interleukin-6 receptor binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

UNIPROTKB|F1RNU0 LOC100525036 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 206 (77.6 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 51/125 (40%), Positives = 73/125 (58%)

Query:   132 LALDVFEKVA---AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLM 188
             +A+D   K+A     F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ 
Sbjct:   154 VAIDFQAKLADGFEGFYKSTYRTLGGETRTIAVTDFEPTHARMAFPCFDEPLFKANFSIK 213

Query:   189 IRRPHHMSSLSNMPLLKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQ 246
             IRR     +LSNMP +KT E +G    DHF+ ++ MS YL+ + V  F S++   +S ++
Sbjct:   214 IRRESRHIALSNMPKVKTIEREGGLLEDHFETTVKMSTYLVAYIVCDFASVSGTASSGVK 273

Query:   247 YKVYA 251
               +YA
Sbjct:   274 VSIYA 278

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1NB92 ERAP1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 213 (80.0 bits), Expect = 4.0e-14, P = 4.0e-14
 Identities = 46/97 (47%), Positives = 64/97 (65%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R +AST FEP  AR  FPCFDEP FKA FS+ IRR P+H++ LSNMPL+K+       V 
Sbjct:    30 RVLASTHFEPTSARMAFPCFDEPAFKAMFSVKIRREPYHLA-LSNMPLVKSVNIASWLVE 88

Query:   215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVY 250
             DHF  ++ MS YL+ F V  F+S++ +  + ++  +Y
Sbjct:    89 DHFDTTVKMSTYLVAFIVSDFKSISKVTSHGVKISIY 125

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005138 "interleukin-6 receptor binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

UNIPROTKB|D6RGW0 ERAP2 "Endoplasmic reticulum aminopeptidase 2" [Homo sapiens (taxid:9606)]

 Score = 212 (79.7 bits), Expect = 4.1e-14, P = 4.1e-14
 Identities = 48/110 (43%), Positives = 67/110 (60%)

Query:   144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
             F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct:   179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238

Query:   204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
             +KT E +G    DHF+ ++ MS YL+ + V  F SL+ + +S ++  +YA
Sbjct:   239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288

GO:0006508 "proteolysis" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|K7GLU6 K7GLU6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 220 (82.5 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
 Identities = 49/98 (50%), Positives = 63/98 (64%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R  AST FEP  AR  FPCFDEP FKA FS+ IRR P H++ +SNMPL+K+    E  V 
Sbjct:   176 RIFASTQFEPTSARMAFPCFDEPAFKASFSIKIRREPRHLA-ISNMPLVKSVTLAEGLVE 234

Query:   215 DHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
             DHF  S+ MS YL+ F V  F+S++    S ++  +YA
Sbjct:   235 DHFDVSVKMSTYLVAFIVSDFKSISKMTKSGVKVSIYA 272

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|F1RNU1 F1RNU1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 220 (82.5 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
 Identities = 49/98 (50%), Positives = 63/98 (64%)

Query:   157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
             R  AST FEP  AR  FPCFDEP FKA FS+ IRR P H++ +SNMPL+K+    E  V 
Sbjct:   176 RIFASTQFEPTSARMAFPCFDEPAFKASFSIKIRREPRHLA-ISNMPLVKSVTLAEGLVE 234

Query:   215 DHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
             DHF  S+ MS YL+ F V  F+S++    S ++  +YA
Sbjct:   235 DHFDVSVKMSTYLVAFIVSDFKSISKMTKSGVKVSIYA 272

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005138 "interleukin-6 receptor binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q6P179 ERAP2 "Endoplasmic reticulum aminopeptidase 2" [Homo sapiens (taxid:9606)]

 Score = 212 (79.7 bits), Expect = 6.7e-14, P = 6.7e-14
 Identities = 48/110 (43%), Positives = 67/110 (60%)

Query:   144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
             F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct:   179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238

Query:   204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
             +KT E +G    DHF+ ++ MS YL+ + V  F SL+ + +S ++  +YA
Sbjct:   239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005788 "endoplasmic reticulum lumen" evidence=TAS

GO:0019885 "antigen processing and presentation of endogenous peptide antigen via MHC class I" evidence=TAS

GO:0008270 "zinc ion binding" evidence=TAS

GO:0004177 "aminopeptidase activity" evidence=IDA

GO:0008237 "metallopeptidase activity" evidence=IDA

GO:0008217 "regulation of blood pressure" evidence=TAS

GO:0002474 "antigen processing and presentation of peptide antigen via MHC class I" evidence=TAS

UNIPROTKB|F1MU34 ERAP1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 208 (78.3 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 54/133 (40%), Positives = 76/133 (57%)

Query:   125 GLPDSDLLALDVFEKVAAKF--FEHCSKRLWVSE-RYVASTVFEPNLARNVFPCFDEPHF 181
             GLP +  + +D    ++  F  F   + R    E R +AST FEP  AR  FPCFDEP  
Sbjct:   143 GLPYT--IVIDYAGNLSESFHGFYKSTYRTKEGEVRILASTQFEPTAARMAFPCFDEPAL 200

Query:   182 KAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV-DHFQESMPMSPYLLCFTVGSFESLT 239
             KA F + IRR P H++ +SNMPL+K+    E  + DHF  ++ MS YL+ F V  F+S++
Sbjct:   201 KASFLIKIRREPRHLA-ISNMPLVKSVTVAEGLIEDHFDVTVRMSTYLVAFIVSDFKSVS 259

Query:   240 LWDNS-IQYKVYA 251
                 S ++  VYA
Sbjct:   260 KMTKSGVKVSVYA 272

GO:0045766 "positive regulation of angiogenesis" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEA

GO:0008235 "metalloexopeptidase activity" evidence=IEA

GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005138 "interleukin-6 receptor binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	434
cd09601	446	cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f	2e-30
pfam01433	390	pfam01433, Peptidase_M1, Peptidase family M1	9e-24
COG0308	859	COG0308, PepN, Aminopeptidase N [Amino acid transp	4e-16
cd09602	438	cd09602, M1_APN_3, Peptidase M1 family containing	6e-12
cd09603	415	cd09603, M1_APN_4, Peptidase M1 family Aminopeptid	2e-11
TIGR02412	831	TIGR02412, pepN_strep_liv, aminopeptidase N, Strep	1e-06
cd09599	442	cd09599, M1_LTA4H, Peptidase M1 family contains le	2e-05
cd09595	407	cd09595, M1, Peptidase M1 family contains aminopep	2e-04
TIGR02411	602	TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola	0.001

>gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ)

 Score =  121 bits (306), Expect = 2e-30
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 2/102 (1%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLK-TAEDGESRV 214
            RY+A+T FEP  AR  FPCFDEP FKA F++ I  P   ++LSNMP+          + 
Sbjct: 113 TRYLAATQFEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKT 172

Query: 215 DHFQESMPMSPYLLCFTVGSFESLTLW-DNSIQYKVYAPRND 255
             F+ + PMS YL+ F VG F+ +     N +  +VYA    
Sbjct: 173 TEFETTPPMSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGK 214

This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446

>gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1

 Score =  101 bits (255), Expect = 9e-24
 Identities = 59/217 (27%), Positives = 92/217 (42%), Gaps = 31/217 (14%)

Query: 66  THYQVDLTGGTYQPYLSG------LPDSDLLALVLSTHEVQSQSSVEVGQSFVNPNVVPI 119
            HY + LT    +P  SG         +    +VL + +++  S    G+     N++ +
Sbjct: 9   IHYDLTLTPDFEKPTFSGSVTITLQAKAATNEIVLHSKDLEITSVTLRGEPVSVNNLISV 68

Query: 120 FDGHSGLPDSDLLALDVFEKVAAK-----FFEHCSK---------RLWVSE------RYV 159
           F       + + L +++   + A        E+  K         R    +      + +
Sbjct: 69  FQLD---DEDEFLVINLASTLQAGQPYTLEIEYEGKLNDDMRGFYRSQYLDQTNGEKKPM 125

Query: 160 ASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRV-DHFQ 218
           A+T FEP  AR  FPCFDEP  KA F + I  P   ++LSNMP +++    + RV   F+
Sbjct: 126 ATTQFEPTDARRAFPCFDEPSVKATFDITINHPADYTALSNMPEIESEPLDDGRVITEFE 185

Query: 219 ESMPMSPYLLCFTVGSFESLTLWDNSIQ-YKVYAPRN 254
            +  MS YLL F VG  E L     S    +VYA   
Sbjct: 186 TTPKMSTYLLAFAVGDLEYLETKTKSGVPVRVYARPG 222

Members of this family are aminopeptidases. The members differ widely in specificity, hydrolysing acidic, basic or neutral N-terminal residues. This family includes leukotriene-A4 hydrolase, this enzyme also has an aminopeptidase activity. Length = 390

>gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism]

 Score = 80.6 bits (199), Expect = 4e-16
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 5/109 (4%)

Query: 158 YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD-H 216
               T  E   AR +FPC DEP  KA F+L IR       +SN  L+      + R    
Sbjct: 134 PYLITQCEAEGARRIFPCIDEPDVKATFTLTIRADKGPKLISNGNLIDGGTLVDGRKIVK 193

Query: 217 FQESMPMSPYLLCFTVGSFESLTLW----DNSIQYKVYAPRNDSTSWTK 261
           F+++ PM  YL     G  E            +  ++Y P         
Sbjct: 194 FEDTPPMPTYLFALVAGDLEVFRDKFDTRSRDVPLEIYVPPGVLDRAKY 242

Length = 859

>gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N

 Score = 66.5 bits (163), Expect = 6e-12
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 162 TVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT-AEDGESRVDHFQES 220
           T FEP+ AR VFPCFD+P  KA F+L +  P   + +SN    +            F E+
Sbjct: 113 TQFEPDDARRVFPCFDQPDLKAPFTLTVTAPKDWTVISNTAATEQSTIRNGYVRWEFPET 172

Query: 221 MPMSPYLLCFTVGSFESLTLWD-NSIQYKVYAPRNDSTSWTKNPD 264
            P+S YL  F  G +  ++  + + I   +Y   + + +  ++ D
Sbjct: 173 PPLSTYLFAFVAGPYHVISDKEHDGIPLGLYCRESLAQALDRDAD 217

This family contains bacterial and eukaryotic aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease belonging to the M1 gluzincin family. APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets, Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 438

>gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N

 Score = 65.3 bits (160), Expect = 2e-11
 Identities = 26/88 (29%), Positives = 38/88 (43%)

Query: 153 WVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES 212
           W        T  +P  A   FPC D P  KA F + +  P   + +SN  L+   + G  
Sbjct: 100 WEEGPDGVWTAGQPEGASTWFPCNDHPSDKATFDISVTVPAGYTVVSNGRLVSRTDLGGR 159

Query: 213 RVDHFQESMPMSPYLLCFTVGSFESLTL 240
              H++   PM+ YL+   VG +E L  
Sbjct: 160 TTWHWRMDEPMATYLVTLAVGRYEVLED 187

This family contains mostly bacterial and some archaeal aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease belonging to the M1 gluzincin family. APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets, Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 415

>gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 29/92 (31%), Positives = 40/92 (43%)

Query: 162 TVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESM 221
           T FEP  AR VF  FD+P  KA F   ++ P   + +SN        +   R   F E+ 
Sbjct: 122 TQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISNSRETDVTPEPADRRWEFPETP 181

Query: 222 PMSPYLLCFTVGSFESLTLWDNSIQYKVYAPR 253
            +S YL     G + S+     S    +YA R
Sbjct: 182 KLSTYLTAVAAGPYHSVQDESRSYPLGIYARR 213

This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site). Length = 831

>gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 4/75 (5%)

Query: 165 EPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--RVDHFQESMP 222
           +   AR++FPC D P  K+ +S  +  P  +++L  M  +   EDGE   +  HF++ +P
Sbjct: 132 QAIHARSLFPCQDTPSVKSTYSATVTVPKELTAL--MSAIPPVEDGEEPRKTYHFEQPVP 189

Query: 223 MSPYLLCFTVGSFES 237
           +  YL+   VG  ES
Sbjct: 190 IPSYLIAIAVGDLES 204

This family includes leukotriene A4 hydrolase (LTA4H; E.C. 3.3.2.6) and the close homolog cold-active aminopeptidase (Colwellia psychrerythraea-type peptidase; ColAP), both members of the aminopeptidase M1 family. LTA4H, is a bifunctional enzyme possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase is as yet unknown while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals. It accepts a variety of substrates, including some opioid, di- and tripeptides, as well as chromogenic aminoacyl-p-nitroanilide derivatives. The aminopeptidase activity of LTA4H is possibly involved in the processing of peptides related to inflammation and host defense. Kinetic analysis shows that LTA4H hydrolyzes arginyl tripeptides with high efficiency and specificity, indicating its function as an arginyl aminopeptidase. LTA4H is overexpressed in certain human cancers, and has been identified as a functionally important target for mediating anticancer properties of resveratrol, a well known red wine polyphenolic compound with cancer chemopreventive activity. Length = 442

>gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase

 Score = 43.2 bits (102), Expect = 2e-04
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKA-YFSLMIRRPHHMSSLSNMPLLKTAEDGESR-- 213
            ++ S   E   AR+ FPC D P   A Y++ +      + + SN       +DGE R  
Sbjct: 105 AFLFSQ-GEAIGARSWFPCQDRPDSVATYYTTVTVPDKTLVAASNGN----KDDGEVRRK 159

Query: 214 VDHFQESMPMSPYLLCFTVGSFESL 238
              F   +P++PYL+   VG  E  
Sbjct: 160 WVEFSPPIPIAPYLIALVVGDLEYP 184

M1 Peptidase family includes aminopeptidase N (APN) and leukotriene A4 hydrolase (LTA4H). All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. APN consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types. APN expression is dysregulated in many inflammatory diseases and is enhanced in numerous tumor cells, making it a lead target in the development of anti-cancer and anti-inflammatory drugs. LTA4H is a bifunctional enzyme, possessing an aminopeptidase as well as an epoxide hydrolase activity. The two activities occupy different, but overlapping sites. The activity and physiological relevance of the aminopeptidase in LTA4H is as yet unknown while the epoxide hydrolase converts leukotriene A4 (LTA4) into leukotriene B4 (LTB4), a potent chemotaxin that is fundamental to the inflammatory response of mammals. Length = 407

>gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase

 Score = 40.5 bits (95), Expect = 0.001
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLL 228
           AR++FPC D P  K+ ++  +  P     +S +   +T+ D       F++ +P+  YL+
Sbjct: 135 ARSLFPCQDTPSVKSTYTAEVESP-LPVLMSGIRDGETSND--PGKYLFKQKVPIPAYLI 191

Query: 229 CFTVGSFESLTLWDNSIQY 247
               G   S  +   S  Y
Sbjct: 192 AIASGDLASAPIGPRSTVY 210

Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known. Length = 602

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	434
KOG1046|consensus	882		100.0
PF01433	390	Peptidase_M1: Peptidase family M1 This is family M	100.0
TIGR02412	831	pepN_strep_liv aminopeptidase N, Streptomyces livi	100.0
TIGR02411	601	leuko_A4_hydro leukotriene A-4 hydrolase/aminopept	100.0
COG0308	859	PepN Aminopeptidase N [Amino acid transport and me	100.0
PRK14015	875	pepN aminopeptidase N; Provisional	100.0
TIGR02414	863	pepN_proteo aminopeptidase N, Escherichia coli typ	100.0
KOG1047|consensus	613		100.0
KOG1932|consensus	1180		99.51

>KOG1046|consensus

Probab=100.00  E-value=2.8e-61  Score=538.67  Aligned_cols=347  Identities=23%  Similarity=0.303  Sum_probs=289.8

Q ss_pred             cccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE------EeccccceeeeeeEEEcceecC--C------------
Q psy2273          55 VHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQSFVN--P------------  114 (434)
Q Consensus        55 ~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~~~n--g------------  114 (434)
                      ..++||....|.||+|.|.+++....|.|++.|.+++      |.||+.+|+ +.++.+......  +            
T Consensus        27 ~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~-i~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (882)
T KOG1046|consen   27 NEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLK-ITSASLVSRPSSGSVQLEVSVEEKEQE  105 (882)
T ss_pred             ccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhcc-ceeEEEEecCCCCcccccccccccccc
Confidence            6789999999999999999999999999999999984      789999998 776766431101  0            


Q ss_pred             ceeeeecCCCCCCCCC--eEEEEEeeecc---cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEE
Q psy2273         115 NVVPIFDGHSGLPDSD--LLALDVFEKVA---AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMI  189 (434)
Q Consensus       115 ~~l~~~~~~~~lp~~~--~L~I~y~g~~~---~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI  189 (434)
                      ..+. +.....+..+.  .|.|.|.|...   .|+|++.|.+..+..+|+++|||||++||++|||||+|++||+|+++|
T Consensus       106 ~~l~-~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~Itl  184 (882)
T KOG1046|consen  106 ETLV-FPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTITL  184 (882)
T ss_pred             eEEE-EEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEEEE
Confidence            1111 11222333333  58999999773   599999998877666899999999999999999999999999999999


Q ss_pred             EecCCceEEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee-CCeeEEEEecCCCccccccCCCchh
Q psy2273         190 RRPHHMSSLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD-NSIQYKVYAPRNDSTSWTKNPDGST  267 (434)
Q Consensus       190 ~~P~~~~alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~-~g~~~~v~~~~~~~~~~~~ald~~~  267 (434)
                      .||++++|+|||++.+.... +|+++.+|++||+|||||+||+||+|++.+... .|+++++|++|+.+++..++++...
T Consensus       185 ~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~~~  264 (882)
T KOG1046|consen  185 VHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEVAT  264 (882)
T ss_pred             EecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHHHH
Confidence            99999999999999877665 669999999999999999999999999999877 6799999999999999999888653


Q ss_pred             -----hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCCcccccc-------
Q psy2273         268 -----WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDK-------  335 (434)
Q Consensus       268 -----le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~si~~~~-------  335 (434)
                           |++|      |..+||++|+|+|+  +|||++    |||||||||+|||+.|++.    +..+..++|       
T Consensus       265 ~~L~~~e~~------f~i~yPLpK~D~ia--vPdf~~----GAMENwGLvtyre~~lL~~----~~~ss~~~k~~va~vI  328 (882)
T KOG1046|consen  265 KVLEFYEDY------FGIPYPLPKLDLVA--VPDFSA----GAMENWGLVTYRETALLYD----PQTSSSSNKQRVAEVI  328 (882)
T ss_pred             HHHHHHHHH------hCCCCCCccccEEe--cCCccc----cchhcCcceeeeehhhccC----CCcCcHHHHHHHHHHH
Confidence                 4554      56667888888887  799996    9999999999999999952    223333343       


Q ss_pred             ---chhheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc----ccc-cccccccccccccCCcCeeccCCccc
Q psy2273         336 ---SQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS----TFS-DKSQYALGHNIAEGSWPIPVPSNKAV  407 (434)
Q Consensus       336 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~s~~i~~~~~~~~  407 (434)
                         -.+.|+|||+||.||++   +|+|||+++|+++...-..+|++    +|+ +....+|+.|++.+||||++|+.++.
T Consensus       329 aHElAHQWFGNLVTm~wW~d---LWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~  405 (882)
T KOG1046|consen  329 AHELAHQWFGNLVTMKWWND---LWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPS  405 (882)
T ss_pred             HHHHHHHHhcCcccHhhhhh---hhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcc
Confidence               34667899999999999   99999999999988888888888    334 44558999999999999999999999


Q ss_pred             ccCcccccccchhHhhh
Q psy2273         408 KRLPSEKFDERSWTNFA  424 (434)
Q Consensus       408 ~~~~~~~~~~~~~~~~~  424 (434)
                      +  |+|+||+++|+.=|
T Consensus       406 e--i~e~fd~i~Y~KGa  420 (882)
T KOG1046|consen  406 E--IDEIFDEISYQKGA  420 (882)
T ss_pred             h--hhhhhhhhhhhHHH
Confidence            9  99999999998644

>PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification

Probab=100.00  E-value=2.3e-54  Score=441.11  Aligned_cols=345  Identities=23%  Similarity=0.289  Sum_probs=269.2

Q ss_pred             ccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE------EeccccceeeeeeEEEcceecCCc-------------eee
Q psy2273          58 VWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQSFVNPN-------------VVP  118 (434)
Q Consensus        58 ~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~~~ng~-------------~l~  118 (434)
                      |||....|.||+|+|+++++...|+|+++|+|+.      |.||+..|+ |.+|.+.+......             .+.
T Consensus         1 RLp~~v~p~~Y~L~L~~~~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~-I~~v~~~~~~~~~~~~~~~~~~~~~~~~l~   79 (390)
T PF01433_consen    1 RLPDDVDPLHYDLDLTPDFEKRTFSGTVTITFEVTEPTNSIVLHAKDLS-ISSVSLNGNDSSSEYKSSPFEYDDENEKLT   79 (390)
T ss_dssp             S--TTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSTECEEEEEESSEE-EEEEEETTEECSCTECCEEEEEECCBTEEE
T ss_pred             CCCCCeEEEEEEEEEEEeCCCCEEEEEEEEEEEEecCCCEEEEEeeccE-EEEEeecCccccccccccceeeccccceee
Confidence            6899999999999999999999999999999995      889998888 88888865322211             121


Q ss_pred             eecCCCCCCCCC--eEEEEEeeec---ccceeeeeeee-cCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEec
Q psy2273         119 IFDGHSGLPDSD--LLALDVFEKV---AAKFFEHCSKR-LWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRP  192 (434)
Q Consensus       119 ~~~~~~~lp~~~--~L~I~y~g~~---~~G~y~~~~~~-~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P  192 (434)
                      + .....+..+.  .|+|.|+|.+   ..|+|++.|.+ .+|+.+++++|||||.+||+||||||+|++||+|+++|++|
T Consensus        80 I-~l~~~l~~g~~~~L~I~y~g~~~~~~~G~~~~~y~~~~~~~~~~~~~t~~~p~~ar~~fPc~D~p~~ka~f~~~i~~p  158 (390)
T PF01433_consen   80 I-TLPKPLPPGSNYTLRIEYSGKISDDSSGLYRSSYTDQTNGNTRWYIYTQFEPNGARRWFPCFDEPSFKATFDLTITHP  158 (390)
T ss_dssp             E-EEEEECSTTEEEEEEEEEEEECBSSSSEEEEEEEE-GTSSSETCEEEEE-TTTTGGGTSSB--STTSEEEEEEEEEEE
T ss_pred             h-hhhhhcccCcEEEEEEEEeecccccccccccceeecccccccCCceeecccccccceeeeeeccCCccceEEEeeecc
Confidence            1 2223344453  5999999975   46999887876 56666666669999999999999999999999999999999


Q ss_pred             CCceEEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeC-CeeEEEEecCCCccccccCCCchh---
Q psy2273         193 HHMSSLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWDN-SIQYKVYAPRNDSTSWTKNPDGST---  267 (434)
Q Consensus       193 ~~~~alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~-g~~~~v~~~~~~~~~~~~ald~~~---  267 (434)
                      ++++|+|||++.+.... +|+++++|+.++|||+||+||+||+|...+.... |+++++|++|+..+.+.++++...   
T Consensus       159 ~~~~~~sng~~~~~~~~~~~~~~~~f~~t~p~~~yl~a~~vg~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l  238 (390)
T PF01433_consen  159 KDYTALSNGPLEEEESNDDGWKTTTFETTPPMPTYLFAFAVGDFESVEVTTKSGVPVRVYARPGDEEQLQFALDIAPKAL  238 (390)
T ss_dssp             TTTEEEESSEEEEEEEETTTEEEEEEEEEEEEEGGG--EEEESEEEEEEETTTEEEEEEEEECTCGGGHHHHHHHHHHHH
T ss_pred             ccceeeccccccccccccccceeEeeecccccCchhhhhhcCcccccccccccccchheeehhhhHHHHHHHHHhhHHHH
Confidence            99999999999887765 6999999999999999999999999999987775 499999999999988877666442   


Q ss_pred             --hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccc------cCCCccccccchhh
Q psy2273         268 --WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWT------KNPNSIFSDKSQYA  339 (434)
Q Consensus       268 --le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t------~~~~si~~~~~~~~  339 (434)
                        |+++      ++.+||+.|+|+|+  +|+|..    |||||||+|+|+|+.+++..-.      ..--.++.++-.+.
T Consensus       239 ~~~~~~------~g~~yp~~k~~~v~--~p~~~~----~~me~~g~i~~~~~~l~~~~~~~~~~~~~~~~~~iahElahq  306 (390)
T PF01433_consen  239 EYYEEY------FGIPYPFKKLDIVA--VPDFPF----GGMENWGLITYRESYLLYDPDISTIGDKQEIASLIAHELAHQ  306 (390)
T ss_dssp             HHHHHH------HTS--SSSEEEEEE--EST-SS----SEE--TTEEEEEGGGTS-STTTS-HHHHHHHHHHHHHHHHTT
T ss_pred             HHHHhh------ccccceecceeEEE--Eecccc----ccccccccccccccccccCcccccchhhhhhHHHHHHHHHHH
Confidence              4444      55677899999998  599994    9999999999999998842000      00123455777778


Q ss_pred             eeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc----ccc-cccccccccccccCCcCeeccCCcccccCcccc
Q psy2273         340 LVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS----TFS-DKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEK  414 (434)
Q Consensus       340 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~  414 (434)
                      |+|||+++.||.+   .|++|+++.|++....-...+.+    .|. +..+.+|..|+...+|||..+++++.+  |..+
T Consensus       307 WfGn~vt~~~w~d---~WL~Eg~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~~~~~~~~--~~~~  381 (390)
T PF01433_consen  307 WFGNLVTPKWWSD---LWLNEGFATYLEYLILEKLFGEWQMMELFLVQEMQRALREDALPNSHPLSSEVEDPSD--IDDM  381 (390)
T ss_dssp             TBTTTEEESSGGG---HHHHHHHHHHHHHHHHHHHHGHHHHHHHHHHHHHHHHHHHHTSTTCCCSSSSSSSESC--GGGG
T ss_pred             HhccCCccccchh---hhHHHHHHHHHHHHhHhhccCcccchhhhhhhhHHHHHHHhhcCCCcceEeCCCCCCC--hHHh
Confidence            8999999999998   99999999999766555555533    233 344689999999999999999999999  9999


Q ss_pred             cccchhH
Q psy2273         415 FDERSWT  421 (434)
Q Consensus       415 ~~~~~~~  421 (434)
                      ||.++|+
T Consensus       382 f~~~~Y~  388 (390)
T PF01433_consen  382 FDDISYN  388 (390)
T ss_dssp             SSHHHHH
T ss_pred             cCccccC
Confidence            9999996

; InterPro: IPR014782 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M1 (clan MA(E)), the type example being aminopeptidase N from Homo sapiens (Human). The protein fold of the peptidase domain for members of this family resembles that of thermolysin, the type example for clan MA. Membrane alanine aminopeptidase (3.4.11.2 from EC) is part of the HEXXH+E group; it consists entirely of aminopeptidases, spread across a wide variety of species []. Functional studies show that CD13/APN catalyzes the removal of single amino acids from the amino terminus of small peptides and probably plays a role in their final digestion; one family member (leukotriene-A4 hydrolase) is known to hydrolyse the epoxide leukotriene-A4 to form an inflammatory mediator []. This hydrolase has been shown to have aminopeptidase activity [], and the zinc ligands of the M1 family were identified by site-directed mutagenesis on this enzyme [] CD13 participates in trimming peptides bound to MHC class II molecules [] and cleaves MIP-1 chemokine, which alters target cell specificity from basophils to eosinophils []. CD13 acts as a receptor for specific strains of RNA viruses (coronaviruses) which cause a relatively large percentage of upper respiratory trace infections. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0008237 metallopeptidase activity, 0008270 zinc ion binding; PDB: 2XQ0_A 2XPY_A 2XPZ_A 3SE6_B 3EBH_A 3EBG_A 3T8V_A 3Q44_A 3Q43_A 3EBI_A ....

>TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type

Probab=100.00  E-value=1.8e-53  Score=474.68  Aligned_cols=333  Identities=17%  Similarity=0.196  Sum_probs=259.1

Q ss_pred             ceEEEEEEEEcCCCC--cEEEEEEEEEEE------EeccccceeeeeeEEEcce-e----cCCceeeeecCCCCCCCC-C
Q psy2273          65 ATHYQVDLTGGTYQP--YLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQS-F----VNPNVVPIFDGHSGLPDS-D  130 (434)
Q Consensus        65 p~hYdL~L~ld~~~~--~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~-~----~ng~~l~~~~~~~~lp~~-~  130 (434)
                      +.||+|+|+++.+..  .+.|+++|+|++      +.||...++ |.+|++.+. .    .+|..+.   ... ++.| .
T Consensus        16 ~~~Y~l~l~l~~~~~~~~~~~~~~i~~~~~~~~~~l~LD~~~l~-I~~v~vng~~~~~~~~~~~~i~---l~~-l~~g~~   90 (831)
T TIGR02412        16 VEHYEIALDLTGADEFFATRCVSTNTVRLSEPGADTFLDLLAAQ-IESVTLNGILDVAPVYDGSRIP---LPG-LLTGEN   90 (831)
T ss_pred             ceeEEEEEEccCCccccccceEEEEEEEEcCCCCcEEEEccCCE-EEEEEECCcccCccccCCCEEE---ccC-CCCCce
Confidence            899999999986655  458888998774      667777777 888888431 0    1222222   111 3343 3


Q ss_pred             eEEEEEeeec---ccceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCCceEEeecCcccee
Q psy2273         131 LLALDVFEKV---AAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTA  207 (434)
Q Consensus       131 ~L~I~y~g~~---~~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~~~alSN~~l~~~~  207 (434)
                      .|+|.|.+..   ..|+|+. ....+|+ .|++ |||||.+||+||||||+|++||+|+++|++|++|+|+|||++.+..
T Consensus        91 ~l~i~~~~~~~~~~~Gl~~~-~~~~~g~-~~~~-Tq~ep~~Ar~~fPcfDeP~~KAtf~ltit~p~~~~v~sNg~~~~~~  167 (831)
T TIGR02412        91 TLRVEATRAYTNTGEGLHRF-VDPVDGE-VYLY-TQFEPADARRVFAVFDQPDLKANFKFSVKAPEDWTVISNSRETDVT  167 (831)
T ss_pred             EEEEEEEEEecCCCceEEEE-EeCCCCe-EEEE-ECCCCcCceeeEecCCCCCCceeEEEEEEECCCceEECCCcccccc
Confidence            5889987765   4788872 2234564 6666 9999999999999999999999999999999999999999987665


Q ss_pred             ecCCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCcccc--ccCCCch-----hhhhhhccccccCC
Q psy2273         208 EDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSW--TKNPDGS-----TWENARNSTSSWTK  280 (434)
Q Consensus       208 ~~~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~--~~ald~~-----~le~yf~~~~~~~~  280 (434)
                      ..++.++++|++|+||||||+||++|+|+.++....|+++++|++|+..+..  +++++..     +|+++      |+.
T Consensus       168 ~~~~~~~~~F~~t~pmstYL~a~~vG~f~~~~~~~~gvpi~v~~~~~~~~~~~~~~al~~~~~~l~~~e~~------fg~  241 (831)
T TIGR02412       168 PEPADRRWEFPETPKLSTYLTAVAAGPYHSVQDESRSYPLGIYARRSLAQYLDADAIFTITRQGLAFFHRK------FGY  241 (831)
T ss_pred             ccCCCeEEEecCCCCcccceEEEEEeceEEEeecCCCEEEEEEECcchhhhhhHHHHHHHHHHHHHHHHHH------hCC
Confidence            5567789999999999999999999999999876678999999999976643  3444432     14444      666


Q ss_pred             CCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCccccccccc----CCCccccccchhheeccceeecCCCCCcch
Q psy2273         281 NLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTK----NPNSIFSDKSQYALVKNLMSVPGSNKPAGS  356 (434)
Q Consensus       281 kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~----~~~si~~~~~~~~~~~~l~~~~~~~~~~~~  356 (434)
                      +||+.|||+|+  +|+|++    |||||||+|+|+|+.+..+..+.    .-..+..++-.|.|+||||||.||++   .
T Consensus       242 pYP~~k~d~V~--vP~f~~----GaMEn~Glit~~e~~l~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~~wW~d---l  312 (831)
T TIGR02412       242 PYPFKKYDQIF--VPEFNA----GAMENAGCVTFAENFLHRAEATRAEKENRAGVILHEMAHMWFGDLVTMRWWND---L  312 (831)
T ss_pred             CCCcccCCEEE--cCCCCC----CcccccceeeechhhccCCcCCHHHHHHHHHHHHHHHHHHHhCCEeccccccc---h
Confidence            77999999998  699995    99999999999999765422110    00146778889999999999999999   9


Q ss_pred             hhhhhhhhhcCCCCCcccCCCc----ccc-cccccccccccccCCcCeeccCCcccccCcccccccchhHh
Q psy2273         357 WENAIQKSSQNDSSSWTKNPNS----TFS-DKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTN  422 (434)
Q Consensus       357 ~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~~  422 (434)
                      |+||+|++|+++...-...|..    .|. .....+|..|.+.++|||..|++++.+  +.++||.++|..
T Consensus       313 WLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~a~~~D~~~~t~Pi~~~~~~~~~--~~~~fd~isY~K  381 (831)
T TIGR02412       313 WLNESFAEYMGTLASAEATEYTDAWTTFAAQGKQWAYEADQLPTTHPIVADVADLAD--ALSNFDGITYAK  381 (831)
T ss_pred             hHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHhcccCCCCCccCCCCHHH--HHHhccCccchh
Confidence            9999999999765554444433    343 334578889999999999999999998  899999999975

This family is a subset of the members of the zinc metallopeptidase family M1 (pfam01433), with a single member characterized in Streptomyces lividans 66 and designated aminopeptidase N. The spectrum of activity may differ somewhat from the aminopeptidase N clade of E. coli and most other Proteobacteria, well separated phylogenetically within the M1 family. The M1 family also includes leukotriene A-4 hydrolase/aminopeptidase (with a bifunctional active site).

>TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase

Probab=100.00  E-value=1.3e-49  Score=429.34  Aligned_cols=346  Identities=12%  Similarity=0.093  Sum_probs=252.4

Q ss_pred             cccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE-------EeccccceeeeeeEEEccee----------cCCcee
Q psy2273          55 VHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA-------LVLSTHEVQSQSSVEVGQSF----------VNPNVV  117 (434)
Q Consensus        55 ~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~-------i~l~~~~L~~i~sV~v~~~~----------~ng~~l  117 (434)
                      ++|.-++...|.||+|+|++|+++++|+|+++|++++       |.||..+|+ |.+|.+.+..          ..|+.+
T Consensus         3 ~s~sn~~~~~~~hy~L~L~vd~~~~~~~G~v~i~l~~~~~~~~~i~Ld~~~L~-I~~V~v~g~~~~~~~~~~~~~~g~~L   81 (601)
T TIGR02411         3 SSLSNYKDFRTSHTDLNLSVDFTKRKLSGSVTFTLQSLTDNLNSLVLDTSYLD-IQKVTINGLPADFAIGERKEPLGSPL   81 (601)
T ss_pred             ccccCCCCcEEEEEEEEEEEeecCCEEEEEEEEEEEECCCCCcEEEEECCCCE-EEEEEECCcccceEeccccCCCCCeE
Confidence            3444467778999999999999999999999999984       678888888 8888874310          113333


Q ss_pred             eeecCCCCCCCCC--eEEEEEeeec-ccceeeeeeeecCC-CeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecC
Q psy2273         118 PIFDGHSGLPDSD--LLALDVFEKV-AAKFFEHCSKRLWV-SERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPH  193 (434)
Q Consensus       118 ~~~~~~~~lp~~~--~L~I~y~g~~-~~G~y~~~~~~~dG-~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~  193 (434)
                      .+ .....++.+.  .|+|.|.+.+ ..|++...+...+| +.+|++ |||||++||+||||||+|++||+|+++|++| 
T Consensus        82 ~I-~l~~~l~~g~~~~l~I~Y~~~~~~~gl~~~~~~~t~g~~~py~~-Tq~qp~~AR~~fPC~D~P~~Katf~~~I~~P-  158 (601)
T TIGR02411        82 TI-SLPIATSKNKELVLNISFSTTPKCTALQWLTPEQTSGKKHPYLF-SQCQAIHARSVIPCQDTPSVKSTYTAEVESP-  158 (601)
T ss_pred             EE-EeCCccCCCceEEEEEEEeecCCCceeEEecccccCCCCCCEEE-ECCcccchheeeeecCCcccceEEEEEEeeC-
Confidence            32 2223333343  4899999987 46775433333344 447887 9999999999999999999999999999999 


Q ss_pred             CceEEeecCccceeecCCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCccccccCCC-ch--hhhh
Q psy2273         194 HMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPD-GS--TWEN  270 (434)
Q Consensus       194 ~~~alSN~~l~~~~~~~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~~~ald-~~--~le~  270 (434)
                       +.|++|+...... .++..+++|++++|||+||+||+||+|+....   |+++++|++|+..+++.+++. ..  +++.
T Consensus       159 -~~av~sg~~~~~~-~~~~~~~~F~~t~pmptYLia~avG~~~~~~~---g~~~~v~~~p~~~~~~~~~~~~~~~~~l~~  233 (601)
T TIGR02411       159 -LPVLMSGIPDGET-SNDPGKYLFKQKVPIPAYLIALASGDLASAPI---GPRSSVYSEPEQLEKCQYEFEHDTENFIKT  233 (601)
T ss_pred             -cceeccCCccccc-cCCCceEEEEeCCCcchhhheeeeccceeccc---CCceEEEccchhHHHHHHHHHHhHHHHHHH
Confidence             8888655433322 24556899999999999999999999998764   788999999998888766554 21  2222


Q ss_pred             hhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCCccccccchhheeccceeecCC
Q psy2273         271 ARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGS  350 (434)
Q Consensus       271 yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~si~~~~~~~~~~~~l~~~~~~  350 (434)
                         .+. +..+||+.|||+|++ +|+|++    ||||||| ++|+|..++.+  +...-++..++-.|.|+|||||+.||
T Consensus       234 ---~e~-~~~pYp~~k~d~vvl-pp~f~~----GgMEN~~-ltf~~~~ll~~--d~s~~~viaHElAHqWfGNlVT~~~W  301 (601)
T TIGR02411       234 ---AED-LIFPYEWGQYDLLVL-PPSFPY----GGMENPN-LTFATPTLIAG--DRSNVDVIAHELAHSWSGNLVTNCSW  301 (601)
T ss_pred             ---HHH-hCCCCcCccceEEEe-cCcccc----ccccccc-ceeeccccccC--ChhhhhhHHHHHHhhccCceeecCCc
Confidence               233 467899999999987 799995    9999999 57888777642  12234678899999999999999999


Q ss_pred             CCCcchhhhhhhhhhcCCCCCcccCCCc--cccccc-cccc--ccccccCCcCeeccCCcccccCcccccccchhHhhh
Q psy2273         351 NKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSDKS-QYAL--GHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNFA  424 (434)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~--~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~~~~  424 (434)
                      ++   .|+|||+++|++....-...|+.  .|.... ...+  .++.+...||+..++.+....-|++.||.++|+.=|
T Consensus       302 ~d---~WLnEGfaty~e~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~dp~~~f~~i~Y~KGa  377 (601)
T TIGR02411       302 EH---FWLNEGWTVYLERRIVGRLYGEKTRHFSALIGWGELQESVKTLGEDPEYTKLVVDLKDNDPDDAFSSVPYEKGF  377 (601)
T ss_pred             hH---HHHHhhHHHHHHHHHHHHhcCcHHHHHHHHHhHHHHHHHHHhhcCCCCCCcccccCCCCChhhhccccchhhHH
Confidence            99   99999999999765443333332  122100 0111  112345678887777665432388999999998633

Members of this family represent a distinctive subset within the zinc metallopeptidase family M1 (pfam01433). The majority of the members of pfam01433 are aminopeptidases, but the sequences in this family for which the function is known are leukotriene A-4 hydrolase. A dual epoxide hydrolase and aminopeptidase activity at the same active site is indicated. The physiological substrate for aminopeptidase activity is not known.

>COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism]

Probab=100.00  E-value=2.2e-46  Score=418.39  Aligned_cols=336  Identities=19%  Similarity=0.236  Sum_probs=254.0

Q ss_pred             ceE--EEEEEEE--cCCCCcEEEEEEEEEEE--------EeccccceeeeeeEEEcce------ecCCceeeeec-CCCC
Q psy2273          65 ATH--YQVDLTG--GTYQPYLSGLPDSDLLA--------LVLSTHEVQSQSSVEVGQS------FVNPNVVPIFD-GHSG  125 (434)
Q Consensus        65 p~h--YdL~L~l--d~~~~~fsG~vtI~~~~--------i~l~~~~L~~i~sV~v~~~------~~ng~~l~~~~-~~~~  125 (434)
                      |.+  |+++|++  ++++.+|+|+++|+++.        +.|+...|+ |.+|++++.      ..++..+.+.. ...+
T Consensus        20 ~~~~i~~~~Ld~~~~~~~~~~~g~~~i~~~~~~~~~~~~lvld~~~l~-i~~v~idg~~~~~~~~~~~~~~~i~~~~~~~   98 (859)
T COG0308          20 PEYAIYDIDLDLDLDPEKTTFEGSVTIRLDAGWRSGADPLVLDAVGLE-IRSVKIDGKALTAWYRLDGDALTITVAPPIP   98 (859)
T ss_pred             ccccccceEEEeeecCCccEEEEEEEEEEeccccCCCCeEEEeccccE-EEEEEEcCccccccccccCccceeeeccccc
Confidence            444  5555554  44458999999999963        788888998 889998642      12222222211 1111


Q ss_pred             CCC-C--C-eEEEEEeeec----ccceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCCceE
Q psy2273         126 LPD-S--D-LLALDVFEKV----AAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSS  197 (434)
Q Consensus       126 lp~-~--~-~L~I~y~g~~----~~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~~~a  197 (434)
                      ... .  . .+.+.+++..    ..|+|...    .+.+.|++ ||||+.+||+||||+|+|++||+|+++|++++.+.+
T Consensus        99 ~~~~~~~~l~i~~~~~~~~s~~~~~Gly~~~----~~~~~~~~-TQ~Ea~~aR~~fpc~D~P~~katf~~~i~~~k~~~~  173 (859)
T COG0308          99 ERSERPFTLAITYEFTGPVSNDTLEGLYRSG----YGGKPYLI-TQCEAEGARRIFPCIDEPDVKATFTLTIRADKGPKL  173 (859)
T ss_pred             cccCCCccEEEEEEecccccCccccceeecC----CCCCeeEE-eecccCCCceeeecCCCCCCcceeEEEEEecCccee
Confidence            111 1  1 2455555433    35777643    23335665 999999999999999999999999999999999999


Q ss_pred             EeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee----CCeeEEEEecCCCccccccCCCchh-----
Q psy2273         198 LSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD----NSIQYKVYAPRNDSTSWTKNPDGST-----  267 (434)
Q Consensus       198 lSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~----~g~~~~v~~~~~~~~~~~~ald~~~-----  267 (434)
                      +|||+....... +|+++++|++++||||||+||++|+|+.+++..    .++++++|++++..+.+.++.+...     
T Consensus       174 iSN~~~~~~~~~~~g~~~~~f~~~~~mptYL~al~~G~~~~~~~~~~~~~~~v~l~iy~~~g~~~~a~~~~~~~~~~~~~  253 (859)
T COG0308         174 ISNGNLIDGGTLVDGRKIVKFEDTPPMPTYLFALVAGDLEVFRDKFDTRSRDVPLEIYVPPGVLDRAKYALDETKRSIEF  253 (859)
T ss_pred             eecCCccccccccCCcEEEEEcCCCCcchHhhheeeecceeeeeeeccCCCCeeEEEEecCcchhhhhhhHHHHHHHhhh
Confidence            999998877666 778999999999999999999999999998887    3899999999988888888877542     


Q ss_pred             hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCC-------ccccccchhhe
Q psy2273         268 WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPN-------SIFSDKSQYAL  340 (434)
Q Consensus       268 le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~-------si~~~~~~~~~  340 (434)
                      ++.|      |+.+|++.+ ++|.  +|+|++    |||||||+++|++..++-.-.+ ...       ++..++--|+|
T Consensus       254 ~e~~------fg~~y~l~~-~~V~--v~~f~~----GaMEN~Gl~tf~~~~ll~~~~~-at~~~~~~~~~viaHElaHqW  319 (859)
T COG0308         254 YEEY------FGLPYALPI-DIVA--VPDFSA----GAMENWGLVTFREKYLLADPET-ATDSDYENVEEVIAHELAHQW  319 (859)
T ss_pred             HHHh------cCCCCCCcc-cEEe--ccCCCC----ccccccceeEEeeeEEeeCccc-chhHHHHHHHHHHHHHHhhhc
Confidence            5555      455556666 5555  799995    9999999999999987743222 122       26789999999


Q ss_pred             eccceeecCCCCCcchhhhhhhhhhcCCCCCcccCC-Cc----ccc-cccccccccccccCCcCeeccCCcccccCcccc
Q psy2273         341 VKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNP-NS----TFS-DKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEK  414 (434)
Q Consensus       341 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~  414 (434)
                      +||||||.||..   .|+||+++.|++....-...+ .+    .|. .....+|.-|+...+|||.+.+.+|.+  |.++
T Consensus       320 fGnlVT~~~W~~---lWLnEgfat~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~hPi~~~~~~~~e--i~~~  394 (859)
T COG0308         320 FGNLVTMKWWDD---LWLNEGFATFREVLWSEDLGGRAWKRWEDFRTLRTSIALAEDSLPSSHPIRVDVYDPKE--INDF  394 (859)
T ss_pred             ccceeeccCHHH---HHHhhhhHHHHHHHHHHHhcchHHHHHHHHHHHhhhHHHhhccccccCCcccCCCCccc--hhhh
Confidence            999999999988   999999999986554443343 11    222 223348888999999999999999999  9999


Q ss_pred             cccchhHhhhh
Q psy2273         415 FDERSWTNFAN  425 (434)
Q Consensus       415 ~~~~~~~~~~~  425 (434)
                      ||.++|+.=|.
T Consensus       395 fD~i~Y~KGs~  405 (859)
T COG0308         395 FDAIVYEKGAS  405 (859)
T ss_pred             cchhhcchhHH
Confidence            99999986443

>PRK14015 pepN aminopeptidase N; Provisional

Probab=100.00  E-value=4.1e-46  Score=414.82  Aligned_cols=332  Identities=11%  Similarity=0.102  Sum_probs=243.9

Q ss_pred             CceEEEEEEEEcCCCCcEEEEEEEEEEE-------EeccccceeeeeeEEEccee-------cCCceeeeecCCCCCCCC
Q psy2273          64 PATHYQVDLTGGTYQPYLSGLPDSDLLA-------LVLSTHEVQSQSSVEVGQSF-------VNPNVVPIFDGHSGLPDS  129 (434)
Q Consensus        64 lp~hYdL~L~ld~~~~~fsG~vtI~~~~-------i~l~~~~L~~i~sV~v~~~~-------~ng~~l~~~~~~~~lp~~  129 (434)
                      .+.||+|+|+++++...++|+++|+...       +.||...|+ |.+|.+.+..       .+|+.+.+ .   .++.+
T Consensus        20 ~V~h~dL~l~ld~~~~~v~g~~~i~~~~~~~~~~~l~LD~~~L~-I~sV~v~G~~~~~~~~~~~~~~L~I-~---~l~~~   94 (875)
T PRK14015         20 LIDTVDLDFDLDPDKTRVTARLQVRRNPDAAHSAPLVLDGEDLE-LLSLALDGQPLAPSAYELDEEGLTI-E---NLPDR   94 (875)
T ss_pred             EEEEEEEEEEEcCCCcEEEEEEEEEEccCCCCCceEEEEcCCCE-EEEEEECCEEcCccceEEcCCEEEE-e---cCCcc
Confidence            3699999999999999999999998763       678888888 8888874311       12233332 1   22333


Q ss_pred             CeEEEEEeeecc-----cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecC-Cc-eEEeecC
Q psy2273         130 DLLALDVFEKVA-----AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPH-HM-SSLSNMP  202 (434)
Q Consensus       130 ~~L~I~y~g~~~-----~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~-~~-~alSN~~  202 (434)
                      ..|+|.|.+.+.     .|+|.+     +|   ++ +|||||++||+||||+|+|++||+|+++|++|+ .| +++|||+
T Consensus        95 ~~l~I~y~~~P~~n~~l~Gly~s-----~~---~~-~TQ~Ep~gAR~~fPc~D~P~~KAtf~itI~~p~~~~~~~lSNG~  165 (875)
T PRK14015         95 FTLEIETEIDPEANTALEGLYRS-----GG---MF-CTQCEAEGFRRITYFLDRPDVLARYTVRIEADKAKYPVLLSNGN  165 (875)
T ss_pred             EEEEEEEEEecCCCCCceeeEEE-----CC---EE-EEeccccCcCCcccCCCCCCCCeeEEEEEEEccccCeEEecCCc
Confidence            358899988763     488863     22   34 599999999999999999999999999999999 58 5799999


Q ss_pred             ccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee-----CCeeEEEEecCCCccccccCCCchhhhhhhcccc
Q psy2273         203 LLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD-----NSIQYKVYAPRNDSTSWTKNPDGSTWENARNSTS  276 (434)
Q Consensus       203 l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~-----~g~~~~v~~~~~~~~~~~~ald~~~le~yf~~~~  276 (434)
                      +++..+. +|+++++|+.++|||+||+||+||+|+.++...     .++++++|++|+..++++++++... +.+..++.
T Consensus       166 l~~~~~~~~g~~~~~w~~~~PmpsYL~Al~aGdf~~~~d~~~~~~g~~vpl~iy~~p~~~~~~~~al~~~~-~~L~~~E~  244 (875)
T PRK14015        166 LVESGELPDGRHWATWEDPFPKPSYLFALVAGDLDVLEDTFTTRSGREVALEIYVEPGNLDKCDHAMDSLK-KSMKWDEE  244 (875)
T ss_pred             cccceeccCCeEEEEEEeCCCcccceEEEEEeCCEEEEEEeeccCCCeEEEEEEEeCCcHHHHHHHHHHHH-HHHHHHHH
Confidence            8877643 789999999999999999999999999988643     3489999999999888877766442 11111233


Q ss_pred             ccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccC------CCccccccchhheeccceeecCC
Q psy2273         277 SWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKN------PNSIFSDKSQYALVKNLMSVPGS  350 (434)
Q Consensus       277 ~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~------~~si~~~~~~~~~~~~l~~~~~~  350 (434)
                      +|+.+||+.+||+|+  +|+|+.    ||||||||++|+|..++...-+..      -.++..++--|.|+||+||+.||
T Consensus       245 ~FG~pYP~~k~diVa--vp~f~~----GaMEN~Gl~~f~~~~lL~~~~~~t~~~~~~i~~vIaHElaHqWFGNlVT~~~W  318 (875)
T PRK14015        245 RFGLEYDLDIFMIVA--VDDFNM----GAMENKGLNIFNSKYVLADPETATDADYERIESVIAHEYFHNWTGNRVTCRDW  318 (875)
T ss_pred             HhCCCCChhhhCEEe--CCCCCC----cccccccccccccceEecCcccCCHHHHHHHHHHHHHHHHHHHHhCcceecch
Confidence            366678999999876  699994    999999999999998864211111      12577899999999999999999


Q ss_pred             CCCcchhhhhhhhhhcCCCCC-cccCCCc-ccccc---cccccccccccCCcCeeccCCcccccCcccccccchhHhh
Q psy2273         351 NKPAGSWENAIQKSSQNDSSS-WTKNPNS-TFSDK---SQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTNF  423 (434)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~---~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~~~  423 (434)
                      ..   .|+|||++.|++..-. ....+.. .+.+.   ...++..|+...+|||.-  +...+  |.++||.++|+.=
T Consensus       319 ~d---LWLnEGFAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~a~pi~p--~~~~~--i~~~f~~~~Y~KG  389 (875)
T PRK14015        319 FQ---LSLKEGLTVFRDQEFSADLGSRAVKRIEDVRVLRAAQFAEDAGPMAHPVRP--DSYIE--INNFYTATVYEKG  389 (875)
T ss_pred             hh---hhhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhhcccccccccCCCCCC--cchhh--HHhcccchhhhHH
Confidence            98   9999999999842111 0000100 01100   112345577677788752  22334  7889999999763

>TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type

Probab=100.00  E-value=4.3e-46  Score=413.80  Aligned_cols=337  Identities=11%  Similarity=0.096  Sum_probs=246.4

Q ss_pred             cccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE------EeccccceeeeeeEEEccee-------cCCceeeeecCC
Q psy2273          57 YVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQSF-------VNPNVVPIFDGH  123 (434)
Q Consensus        57 y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~~-------~ng~~l~~~~~~  123 (434)
                      |+.|... +.||+|+|+++++...++|+++|+++.      +.||..+|+ |.+|.+++..       .+++.+.+ .  
T Consensus         2 y~~~~~~-v~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~~l~Ld~~~L~-I~sV~v~g~~~~~~~~~~~~~~L~I-~--   76 (863)
T TIGR02414         2 YKPPPFL-IEKTHLDFDLHEEETVVRARLTVRRNPDGNGAPLVLDGEELK-LLSIAIDGKPLAAGDYQLDDETLTI-A--   76 (863)
T ss_pred             CCCCCce-EEEEEEEEEEeCCCeEEEEEEEEEEecCCCCCcEEEEecCCE-EEEEEECCEecCcceEEEcCCEEEE-e--
Confidence            4444444 599999999999999999999999873      778888888 8888884321       11222222 1  


Q ss_pred             CCCCCCCeEEEEEeeecc-----cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCC-c-e
Q psy2273         124 SGLPDSDLLALDVFEKVA-----AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHH-M-S  196 (434)
Q Consensus       124 ~~lp~~~~L~I~y~g~~~-----~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~-~-~  196 (434)
                       .++....|+|.|.+.+.     .|+|.+.     +    +++|||||++||++|||||+|++||+|+++|++|++ | +
T Consensus        77 -~~~~~~~l~i~~~~~p~~n~~l~GlY~s~-----~----~~~TQ~Ep~gaR~ifpc~DeP~~kAtf~vtI~~p~~~y~v  146 (863)
T TIGR02414        77 -SVPESFTLEIETEIHPEENTSLEGLYKSG-----G----NFCTQCEAEGFRRITYFPDRPDVMSRYTVTITADKKKYPV  146 (863)
T ss_pred             -eCCccEEEEEEEEeecccCCCCeEEEEeC-----C----eEEEEecCCCCCcCCCCCCCCCCceEEEEEEEECCCcceE
Confidence             12322248888876542     4888742     2    445999999999999999999999999999999986 6 5


Q ss_pred             EEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee-----CCeeEEEEecCCCccccccCCCchhhhh
Q psy2273         197 SLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD-----NSIQYKVYAPRNDSTSWTKNPDGSTWEN  270 (434)
Q Consensus       197 alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~-----~g~~~~v~~~~~~~~~~~~ald~~~le~  270 (434)
                      ++|||+++..... +|+++++|+.++|||+||+||+||+|++++...     .++++++|++|+..+++.++++... +.
T Consensus       147 ~lSNg~~~~~~~~~~g~~~~~f~~t~pmptYLfA~vaGdf~~~~~~~~t~sg~~v~l~iy~~p~~~~~~~~al~~~~-~~  225 (863)
T TIGR02414       147 LLSNGNKIASGELPDGRHWAEWEDPFPKPSYLFALVAGDLDVLEDTFTTKSGREVALRVYVEEGNKDKCDHAMESLK-KA  225 (863)
T ss_pred             EEeCCccccceecCCCeEEEEEeCCCCcChhHheEEEeCCEEEEEEeeccCCCceEEEEEEccCcHHHHHHHHHHHH-HH
Confidence            6899987765544 788999999999999999999999999988653     3589999999999888888776542 11


Q ss_pred             hhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccC------CCccccccchhheeccc
Q psy2273         271 ARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKN------PNSIFSDKSQYALVKNL  344 (434)
Q Consensus       271 yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~------~~si~~~~~~~~~~~~l  344 (434)
                      +..++.+|+.+||+.|||+|+  +|+|+.    ||||||||++|+|..++...-+..      -.++..++--|.|+|||
T Consensus       226 L~~~E~~fG~pYPl~k~diVa--vpdf~~----GaMEN~GLi~f~e~~lL~~~~~~td~~~~~i~~VIaHElaHqWfGNl  299 (863)
T TIGR02414       226 MKWDEEVFGLEYDLDIFMIVA--VDDFNM----GAMENKGLNIFNSKYVLADPETATDADYERIESVIAHEYFHNWTGNR  299 (863)
T ss_pred             HHHHHHHhCCCCChhhccEEe--cCCCCC----ccccccceeccccceEEeCCCCCCHHHHHHHHHHHHHHHHHHHhcce
Confidence            111233366678999999887  699994    999999999999999874322111      12567788899999999


Q ss_pred             eeecCCCCCcchhhhhhhhhhcCCCCCcccCCC-c-ccccc---cccccccccccCCcCeeccCCcccccCcccccccch
Q psy2273         345 MSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPN-S-TFSDK---SQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERS  419 (434)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~  419 (434)
                      ||+.||+.   .|+|||+++|++..-....... . .+.+.   ...++.-|+...+|||..  ....+  |.+.||.++
T Consensus       300 VT~~~W~~---LWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~lr~~~f~~D~~p~~~Pi~~--~~~~~--i~~~y~~i~  372 (863)
T TIGR02414       300 VTCRDWFQ---LSLKEGLTVFRDQEFSADMTSRAVKRIEDVRLLRAHQFPEDAGPMAHPVRP--ESYVE--INNFYTATV  372 (863)
T ss_pred             eeecchhh---hhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhcccccccCCCCCC--cchhh--HHhccchHH
Confidence            99999998   9999999999863211100100 0 01100   112344577777888863  23344  789999999


Q ss_pred             hHh
Q psy2273         420 WTN  422 (434)
Q Consensus       420 ~~~  422 (434)
                      |+.
T Consensus       373 Y~K  375 (863)
T TIGR02414       373 YEK  375 (863)
T ss_pred             hHH
Confidence            985

The M1 family of zinc metallopeptidases contains a number of distinct, well-separated clades of proteins with aminopeptidase activity. Several are designated aminopeptidase N, EC 3.4.11.2, after the Escherichia coli enzyme, suggesting a similar activity profile. This family consists of all aminopeptidases closely related to E. coli PepN and presumed to have similar (not identical) function. Nearly all are found in Proteobacteria, but members are found also in Cyanobacteria, plants, and apicomplexan parasites. This family differs greatly in sequence from the family of aminopeptidases typified by Streptomyces lividans PepN (TIGR02412), from the membrane bound aminopeptidase N family in animals, etc.

>KOG1047|consensus

Probab=100.00  E-value=5.5e-37  Score=316.40  Aligned_cols=347  Identities=15%  Similarity=0.141  Sum_probs=254.4

Q ss_pred             cCCCCCCCcccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE------EeccccceeeeeeEEEcceecCCceeee-
Q psy2273          47 FQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQSFVNPNVVPI-  119 (434)
Q Consensus        47 ~~~t~~~~~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~~~ng~~l~~-  119 (434)
                      |+++.+|++      ...+.|++|++++||+.+.++|+|.+++++      +.||.++|. |.+|.+++     .+.++ 
T Consensus         6 Dp~s~sn~~------~~~~~H~~l~~~vdF~~~~i~G~a~l~l~~~~~~~~~~LDt~~l~-i~~v~i~~-----~~~~~~   73 (613)
T KOG1047|consen    6 DPSSASNYR------DVTVLHLALNLRVDFEKRGISGSALLTLRLLEDNLKLVLDTRDLS-IRNVTING-----EEPPFR   73 (613)
T ss_pred             CcccccChh------hhhhheeeeeEEEecccceecceEEEEEEeccCCceeEeeeccee-eEEeeccC-----CCCCCc
Confidence            677777754      344789999999999999999999999984      568888888 88888854     22211 


Q ss_pred             ------e---------cCCCCCCCCC-eEEEEEeeec-cccee-eeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCC
Q psy2273         120 ------F---------DGHSGLPDSD-LLALDVFEKV-AAKFF-EHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHF  181 (434)
Q Consensus       120 ------~---------~~~~~lp~~~-~L~I~y~g~~-~~G~y-~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~  181 (434)
                            +         .....-..+. .|.|.|.+.+ +.++- ....++.+++.+|++ ||||+++||.+|||+|+|++
T Consensus        74 i~~~~~~~g~~~~~~l~~~~~~a~~~~~l~i~y~Ts~~atalqwL~peQT~gk~~Pylf-sQCQAIhaRsi~PC~DTPav  152 (613)
T KOG1047|consen   74 IGFRQPFLGSGQKLVLPAPSSKAGERLQLLIWYETSPSATALQWLNPEQTSGKKHPYLF-SQCQAIHARSIFPCQDTPAV  152 (613)
T ss_pred             cCcccCCCCCceEEEeccccccccCceEEEEEEeccCCcceeEEeccccccCCCCCchH-HHHHHhHHheeccccCCCcc
Confidence                  1         1111111122 3889998766 44552 234566666669999 99999999999999999999


Q ss_pred             cceEEEEEEecCCceEEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCccccc
Q psy2273         182 KAYFSLMIRRPHHMSSLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWT  260 (434)
Q Consensus       182 KAtf~lsI~~P~~~~alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~~  260 (434)
                      |.||++.|.+|.++.+++.+-....+.. +|...++|++..|||+||+||++|++++.+.   |++.+||++|...+.|.
T Consensus       153 K~ty~a~v~vp~~l~a~mSai~~~~~~~~~~~~~f~f~q~~pIP~YLiai~~G~L~s~eI---gpRs~VwaEp~~~~a~~  229 (613)
T KOG1047|consen  153 KSTYTAEVEVPMGLTALMSAIPAGEKPGSNGRAIFRFKQEVPIPSYLIAIAVGDLESREI---GPRSRVWAEPCLLDACQ  229 (613)
T ss_pred             eeEEEEEEEcCCcceeeeeccccccCCCCCCcceEEEEeccCchhhhHHHhhcccccccc---CCccceecchhhhHHHH
Confidence            9999999999999999855544333322 6788999999999999999999999999998   89999999999998886


Q ss_pred             cCCCchhhhhhhcc-ccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCCccccccchhh
Q psy2273         261 KNPDGSTWENARNS-TSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYA  339 (434)
Q Consensus       261 ~ald~~~le~yf~~-~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~si~~~~~~~~  339 (434)
                      .+....+ +.+... +. ..-+|.|..||-+++ +|.|++    |||||.-+++..-+-|..   +..--.+++++-.+.
T Consensus       230 ~ef~~~~-e~~L~~Ae~-l~GpY~WgryDllvl-PpSFP~----gGMENPcltF~TpTllaG---Drsl~~vIaHEIAHS  299 (613)
T KOG1047|consen  230 EEFAGET-EDFLKAAEK-LFGPYVWGRYDLLVL-PPSFPF----GGMENPCLTFVTPTLLAG---DRSLVDVIAHEIAHS  299 (613)
T ss_pred             HHHHhhh-HHHHHHHHH-HcCCcccccceEEEe-cCCCCc----ccccCcceeeecchhhcC---CcchhhHHHHHhhhh
Confidence            5544222 111111 22 446789999999888 999996    999998887666655542   112234566888888


Q ss_pred             eeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc--ccccc-cccccc--cccccCCcCeeccCCcccccCcccc
Q psy2273         340 LVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSDK-SQYALG--HNIAEGSWPIPVPSNKAVKRLPSEK  414 (434)
Q Consensus       340 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~--~~~~~~s~~i~~~~~~~~~~~~~~~  414 (434)
                      |.|||||=.=|..   -|+|||++-|++....=......  +|..- .-..|+  .|....-||....|++=.-+-|+..
T Consensus       300 WtGNlVTN~sWeh---fWLNEGfTvylErrI~g~~~g~~~~~f~a~~gw~~L~~~~d~~g~~~~~tkLv~kl~~~dPDda  376 (613)
T KOG1047|consen  300 WTGNLVTNASWEH---FWLNEGFTVYLERRIVGRLYGEAYRQFEALIGWRELRPSMDLFGETSEFTKLVVKLENVDPDDA  376 (613)
T ss_pred             hcccccccCccch---hhhcccchhhhhhhhhhhhcchhHHHHHHhcChhhhhhHHHhcCCCcccchhhhhccCCChHHh
Confidence            8899988776676   89999999999875553333322  33311 112233  3778888888888877666668889


Q ss_pred             cccchhHh
Q psy2273         415 FDERSWTN  422 (434)
Q Consensus       415 ~~~~~~~~  422 (434)
                      |..+-|+.
T Consensus       377 fs~VpYeK  384 (613)
T KOG1047|consen  377 FSQVPYEK  384 (613)
T ss_pred             hhcCchhh
Confidence            99998874

>KOG1932|consensus

Probab=99.51  E-value=4.7e-13  Score=148.18  Aligned_cols=299  Identities=14%  Similarity=0.117  Sum_probs=186.6

Q ss_pred             ceEEEEEEE-EcCCCCcEEEEEEEEEE-------EEeccccceeeeeeEEEcce----ecCCce------------eee-
Q psy2273          65 ATHYQVDLT-GGTYQPYLSGLPDSDLL-------ALVLSTHEVQSQSSVEVGQS----FVNPNV------------VPI-  119 (434)
Q Consensus        65 p~hYdL~L~-ld~~~~~fsG~vtI~~~-------~i~l~~~~L~~i~sV~v~~~----~~ng~~------------l~~-  119 (434)
                      ..|=.+.|+ +|+.++.|.|.++|++.       .+.||+..+. |.+|.|.+.    ..++-.            +.. 
T Consensus        27 ~~hQkv~l~~Idf~~rsi~G~tEitI~P~~~nL~~i~l~~kql~-I~sV~V~~~~~~f~y~d~~q~~~~~~~~~~~l~~~  105 (1180)
T KOG1932|consen   27 VLHQKVSLSNIDFSKRSIIGFTEITIQPLVPNLSVIVLHSKQLR-ILSVLVNGSPTKFIYNDPTQNDCTDEIWQRVLDPA  105 (1180)
T ss_pred             ceEEEEEeecccceeeEEEeEEEEEEecCCCCcceEEEeccccE-EEEEEecCcccceeecchhhhhhhhhhhhhhhhhh
Confidence            788899999 99999999999999997       3778998888 888888652    001100            000 


Q ss_pred             ---------e------cCCC--CCCCC------C--e--EEEEEee-ecccce--eeeee-eecCCCeeEEEEecccc-C
Q psy2273         120 ---------F------DGHS--GLPDS------D--L--LALDVFE-KVAAKF--FEHCS-KRLWVSERYVASTVFEP-N  167 (434)
Q Consensus       120 ---------~------~~~~--~lp~~------~--~--L~I~y~g-~~~~G~--y~~~~-~~~dG~~~yl~~Tq~ep-~  167 (434)
                               +      ++..  .+|..      .  .  +.|.|+- .+..|+  ++..+ ....+  ..++.+..|- .
T Consensus       106 s~~~~~~~~y~~l~~~~g~L~I~ipk~~~~~~ee~~~lr~~I~~s~~~pk~gi~Fv~~~~~~~~~~--~hvft~~~~~~s  183 (1180)
T KOG1932|consen  106 SQSHFLAVQYEDLDEDNGELLIKIPKESKKVGEELKALRLRIDFSVREPKDGIKFVRPNYIVSPRD--KHVFTNNTQISS  183 (1180)
T ss_pred             hhhhhHHHhhhccccCCCeEEEEcCchhhhhhhhccceEEEEEEEccCCCCCeEEeccCcccCccc--CceEeecCcccc
Confidence                     0      0000  11211      1  1  5588864 444564  33322 11222  2355334333 4


Q ss_pred             CccEEEEcCCCCCCcceEEEEEEecCCceEEeecCccceeec--CCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCe
Q psy2273         168 LARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAED--GESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSI  245 (434)
Q Consensus       168 ~AR~~FPCfDeP~~KAtf~lsI~~P~~~~alSN~~l~~~~~~--~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~  245 (434)
                      +||.||||.|.+.-++||+|.+++|+.++++|+|.+......  -+.++++|..+.|+++.-+|||||.|+..... .++
T Consensus       184 ~ar~WfPCvD~~~e~~tWeLeftvp~~~~av~~geLl~~v~~~D~~Kkt~~ys~tvPvA~~~I~~AiG~F~~~~~P-~~~  262 (1180)
T KOG1932|consen  184 SARSWFPCVDSSYERCTWELEFTVPKNLVAVSCGELLEQVETPDLRKKTYHYSLTVPVAPSNIGFAIGPFKSYVEP-SMI  262 (1180)
T ss_pred             ccceEEeecCCccccceEEEEEEecccceeccchhhhheeecccccccEEEEEEeccCCccccceeeccccccCCC-ccC
Confidence            689999999999999999999999999999999988765544  35679999999999999999999999998432 367


Q ss_pred             eEEEEecCCCccccccCCCchh-hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCccccccc
Q psy2273         246 QYKVYAPRNDSTSWTKNPDGST-WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSW  324 (434)
Q Consensus       246 ~~~v~~~~~~~~~~~~ald~~~-le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~  324 (434)
                      ++..+|-|+..+-+...  ... .+.+-.++++++..|||..|-+|+| .+...     .-|.-.-|.++.-+. +++.-
T Consensus       263 ~i~~f~LP~~~~~v~nt--~~~l~k~iefye~~ls~rYPF~~~k~VFv-d~~~~-----~i~~~asl~I~st~l-Ly~~~  333 (1180)
T KOG1932|consen  263 DITHFCLPGLEPLVKNT--TVYLHKAIEFYEEELSSRYPFSCYKTVFV-DEAAV-----EISSYASLSIFSTSL-LYSKN  333 (1180)
T ss_pred             cceeEecCcchHHhhhH--HHHHHHHHHHHHHHhccCCCcceeeEEEe-cCCcc-----eeeecceeeeeeccc-cchHh
Confidence            88999999765433211  111 1111123444778899999999996 33322     233333344444433 33211


Q ss_pred             ccCCCccccccch----hheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCcc
Q psy2273         325 TKNPNSIFSDKSQ----YALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNST  379 (434)
Q Consensus       325 t~~~~si~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  379 (434)
                      ..+...+.+.+-.    ..|+|=..|--=|++   .|+-+|.+-|+-+..+-++-.+-+
T Consensus       334 iIDq~~~tr~~La~aLA~Q~fg~yIsp~~wsD---~Wl~~GiagYl~~l~~kk~lGNNE  389 (1180)
T KOG1932|consen  334 IIDQTFLTRRKLAWALASQWFGVYISPVDWSD---FWLLKGIAGYLTGLFVKKFLGNNE  389 (1180)
T ss_pred             hhhHHHHHHHHHHHHHHHhhhEEEeeccchhh---hHHHHhHHHHHHHHHHHHHhCchH
Confidence            1122222222111    133554444433344   899999999996655555445443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	434
3mdj_A	921	Er Aminopeptidase, Erap1, Bound To The Zinc Aminope		3e-18
2yd0_A	897	Crystal Structure Of The Soluble Domain Of Human En		3e-18
3qnf_A	954	Crystal Structure Of The Open State Of Human Endopl		3e-18
3se6_A	967	Crystal Structure Of The Human Endoplasmic Reticulu		3e-17
4e36_A	967	Crystal Structure Of The Human Endoplasmic Reticulu		3e-17
4f5c_A	959	Crystal Structure Of The Spike Receptor Binding Dom		6e-10
4hol_A	908	Crystal Structure Of Porcine Aminopeptidase-N Compl		7e-10
4fke_A	909	Crystal Structure Of Porcine Aminopeptidase-N Lengt		7e-10
4h5h_A	908	Crystal Structure Of Porcine Aminopeptidase-N Compl		7e-10
4fyq_A	903	Human Aminopeptidase N (Cd13) Length = 903		6e-09
1z1w_A	780	Crystal Structures Of The Tricorn Interacting Facor		2e-08
3q7j_A	780	Engineered Thermoplasma Acidophilum F3 Factor Mimic		4e-08

>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 139 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 197
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 198 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 235

>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 130 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 188
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 189 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 226

>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
           R +AST FEP  AR  FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+    E  + 
Sbjct: 181 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 239
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
           DHF  ++ MS YL+ F +  FES++ +  + ++  VYA
Sbjct: 240 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 277

>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
           F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238
Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
           +KT E +G    DHF+ ++ MS YL+ + V  F SL+ + +S ++  +YA
Sbjct: 239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288

>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967

Iteration: 1
 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
           F++   + L    R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP 
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238
Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
           +KT E +G    DHF+ ++ MS YL+ + V  F SL+ + +S ++  +YA
Sbjct: 239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288

>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
           ++ +A+T  +   AR  FPCFDEP  KA F++ +  P+++++LSNMP   +    AED  
Sbjct: 181 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 240
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
             V  F+ +  MS YLL + V  F+S+
Sbjct: 241 WSVTEFETTPVMSTYLLAYIVSEFQSV 267

>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
           ++ +A+T  +   AR  FPCFDEP  KA F++ +  P+++++LSNMP   +    AED  
Sbjct: 137 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 196
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
             V  F+ +  MS YLL + V  F+S+
Sbjct: 197 WSVTEFETTPVMSTYLLAYIVSEFQSV 223

>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
           ++ +A+T  +   AR  FPCFDEP  KA F++ +  P+++++LSNMP   +    AED  
Sbjct: 138 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 197
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
             V  F+ +  MS YLL + V  F+S+
Sbjct: 198 WSVTEFETTPVMSTYLLAYIVSEFQSV 224

>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
           ++ +A+T  +   AR  FPCFDEP  KA F++ +  P+++++LSNMP   +    AED  
Sbjct: 137 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 196
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
             V  F+ +  MS YLL + V  F+S+
Sbjct: 197 WSVTEFETTPVMSTYLLAYIVSEFQSV 223

>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNM----PLLKTAEDGES 212
           + VA+T  +   AR  FPCFDEP  KA F++ +  P  +++LSNM    P     ED   
Sbjct: 141 KVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW 200
Query: 213 RVDHFQESMPMSPYLLCFTVGSFE 236
            V  F  +  MS YLL F V  F+
Sbjct: 201 NVTEFHTTPKMSTYLLAFIVSEFD 224

>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
           E  + +T FE   AR +FPC D P +KA F++ +       ++SNMP  K  E  E +V 
Sbjct: 92  ENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMP-PKRIEVSERKVV 150
Query: 216 HFQESMPMSPYLLCFTVGSF 235
            FQ++  MS YLL   +G F
Sbjct: 151 EFQDTPRMSTYLLYVGIGKF 170

>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
           E  + +T F+   AR +FPC D P +KA F++ +       ++SNMP  K  E  E +V 
Sbjct: 92  ENGMITTHFQATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMP-PKRIEVSERKVV 150
Query: 216 HFQESMPMSPYLLCFTVGSF 235
            FQ++  MS YLL   +G F
Sbjct: 151 EFQDTPRMSTYLLYVGIGKF 170

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	434
1z5h_A	780	Tricorn protease interacting factor F3; zinc amino	3e-31
2xdt_A	897	Endoplasmic reticulum aminopeptidase 1; glycoprote	4e-29
3se6_A	967	Endoplasmic reticulum aminopeptidase 2; thermolysi	2e-28
3b7s_A	616	Leukotriene A-4 hydrolase; transition state, analo	8e-23
3cia_A	605	Cold-active aminopeptidase; psychrohilic, hydrolas	3e-22
2xq0_A	632	LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B	2e-20
3ebh_A	889	PFA-M1, M1 family aminopeptidase; hydrolase, metal	1e-17
2gtq_A	867	Aminopeptidase N; alanine aminopeptidase, M1 famil	2e-15
3b34_A	891	Aminopeptidase N; protease, hydrolase, thermolysin	5e-14

>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780

 Score =  125 bits (317), Expect = 3e-31
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 1/104 (0%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
           E  + +T FE   AR +FPC D P +KA F++ +       ++SNMP  +  E  E +V 
Sbjct: 92  ENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRI-EVSERKVV 150

Query: 216 HFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSW 259
            FQ++  MS YLL   +G F         I   + + ++  + +
Sbjct: 151 EFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSKY 194

>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967

 Score =  117 bits (295), Expect = 2e-28
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 2/101 (1%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRV- 214
            R +A T FEP  AR  FPCFDEP FKA FS+ IRR     +LSNMP +KT E     + 
Sbjct: 191 TRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGGLLE 250

Query: 215 DHFQESMPMSPYLLCFTVGSFESLTLW-DNSIQYKVYAPRN 254
           DHF+ ++ MS YL+ + V  F SL+ +  + ++  +YA  +
Sbjct: 251 DHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPD 291

>3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616

 Score = 99.9 bits (249), Expect = 8e-23
 Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT---AEDGES 212
           E     +  +    R + PC D P  K  ++  +  P  + +L +          ED   
Sbjct: 133 EHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSR 192

Query: 213 RVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPR 253
           ++  F + +P+  YL+   VG+ ES        +  V++ +
Sbjct: 193 KIYKFIQKVPIPCYLIALVVGALESR---QIGPRTLVWSEK 230

>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605

 Score = 98.3 bits (245), Expect = 3e-22
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
           E+    +  +   AR+  P  D P  +  ++  I     + ++ +       E       
Sbjct: 137 EKPFLFSQNQAIHARSWIPIQDTPSVRVTYTARITTDKDLLAVMSANNEPGTE--RDGDY 194

Query: 216 HFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPR 253
            F     + PYL+   VG  E   +   +    +YA  
Sbjct: 195 FFSMPQAIPPYLIAIGVGDLEFKAMSHQT---GIYAES 229

>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632

 Score = 93.4 bits (232), Expect = 2e-20
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
            +    +  E   AR++FPCFD P  K+ F+  I  P  +   S + +  T++D  + + 
Sbjct: 138 GKPYVFSQLEAIHARSLFPCFDTPSVKSTFTASIESPLPV-VFSGIRIEDTSKD--TNIY 194

Query: 216 HFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAP 252
            F++ +P+  YL+    G   S        +  VY  
Sbjct: 195 RFEQKVPIPAYLIGIASGDLSSA---PIGPRSTVYTE 228

>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889

 Score = 84.5 bits (209), Expect = 1e-17
 Identities = 16/109 (14%), Positives = 31/109 (28%), Gaps = 9/109 (8%)

Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRP--HHMSSLSNMPLLKTAEDGESR- 213
           + +  +  E    R +    D P   A + + +      +   LSN   +   E    R 
Sbjct: 116 KNIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRH 175

Query: 214 VDHFQESMPMSPYLLCFTVGSFESL------TLWDNSIQYKVYAPRNDS 256
              F +      YL     G  + L            ++  V++     
Sbjct: 176 GARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYV 224

>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867

 Score = 77.6 bits (191), Expect = 2e-15
 Identities = 19/106 (17%), Positives = 34/106 (32%), Gaps = 8/106 (7%)

Query: 158 YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIR--RPHHMSSLSNMPLLKTAEDGESR-V 214
               T  EP   R +    D P   + F+  I   +  +   LSN   +   E  + R  
Sbjct: 110 GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDGGEFSDGRHW 169

Query: 215 DHFQESMPMSPYLLCFTVGSFESL-----TLWDNSIQYKVYAPRND 255
             +++      YL     G          T+   +++ + Y    D
Sbjct: 170 VKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEAD 215

>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891

 Score = 73.4 bits (180), Expect = 5e-14
 Identities = 23/106 (21%), Positives = 36/106 (33%), Gaps = 8/106 (7%)

Query: 158 YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIR--RPHHMSSLSNMPLLKTAEDGESR-V 214
               T  E    R++    D P   A F+  I   +  +   LSN   +   E    R  
Sbjct: 135 DALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPFLLSNGNRVAQGELENGRHW 194

Query: 215 DHFQESMPMSPYLLCFTVGSFESL-----TLWDNSIQYKVYAPRND 255
             +Q+  P   YL     G F+ L     T     +  ++Y  R +
Sbjct: 195 VQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGN 240

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	434
3se6_A	967	Endoplasmic reticulum aminopeptidase 2; thermolysi	100.0
4fke_A	909	Aminopeptidase N; zinc aminopeptidase, hydrolase;	100.0
2xdt_A	897	Endoplasmic reticulum aminopeptidase 1; glycoprote	100.0
3u9w_A	608	Leukotriene A-4 hydrolase; hydrolase-hydrolase inh	100.0
1z5h_A	780	Tricorn protease interacting factor F3; zinc amino	100.0
3ebh_A	889	PFA-M1, M1 family aminopeptidase; hydrolase, metal	100.0
2xq0_A	632	LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B	100.0
3cia_A	605	Cold-active aminopeptidase; psychrohilic, hydrolas	100.0
2gtq_A	867	Aminopeptidase N; alanine aminopeptidase, M1 famil	100.0
3b34_A	891	Aminopeptidase N; protease, hydrolase, thermolysin	100.0
4fgm_A	597	Aminopeptidase N family protein; structural genomi	97.88

>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*

Probab=100.00  E-value=9e-60  Score=530.61  Aligned_cols=348  Identities=22%  Similarity=0.300  Sum_probs=288.5

Q ss_pred             CCcccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE------EeccccceeeeeeEEEcceec-----CCc------
Q psy2273          53 DGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA------LVLSTHEVQSQSSVEVGQSFV-----NPN------  115 (434)
Q Consensus        53 ~~~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~------i~l~~~~L~~i~sV~v~~~~~-----ng~------  115 (434)
                      ....||||....|.||+|+|++++++.+|+|+|+|++++      |.||+.+|+ |.+|++.+...     .+.      
T Consensus        63 p~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~-I~~v~v~~~~~~~~~~~~~~~~~~~  141 (967)
T 3se6_A           63 PWQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLE-ITNATLQSEEDSRYMKPGKELKVLS  141 (967)
T ss_dssp             SCCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCE-EEEEEEEECC---CCSSCEECEEEE
T ss_pred             CcccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCE-EEEEEEeccCCcccccccceeeeEE
Confidence            466789999989999999999999999999999999984      889999999 88888753110     122      


Q ss_pred             -----eeeeecCCCCCCCCC--eEEEEEeeecc---cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceE
Q psy2273         116 -----VVPIFDGHSGLPDSD--LLALDVFEKVA---AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYF  185 (434)
Q Consensus       116 -----~l~~~~~~~~lp~~~--~L~I~y~g~~~---~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf  185 (434)
                           .+.+ .....++.|.  .|.|.|+|.+.   .|||++.|.+.+|+++|+++|||||.+||+||||||+|++||+|
T Consensus       142 ~~~~~~l~i-~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf  220 (967)
T 3se6_A          142 YPAHEQIAL-LVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANF  220 (967)
T ss_dssp             EGGGTEEEE-ECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEE
T ss_pred             ecCCCEEEE-EcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEE
Confidence                 2222 2334455553  49999999874   59999888887888888888999999999999999999999999


Q ss_pred             EEEEEecCCceEEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee-CCeeEEEEecCCCccccccCC
Q psy2273         186 SLMIRRPHHMSSLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD-NSIQYKVYAPRNDSTSWTKNP  263 (434)
Q Consensus       186 ~lsI~~P~~~~alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~-~g~~~~v~~~~~~~~~~~~al  263 (434)
                      +++|++|++|+|+|||++.+.... +|+++++|++|+||||||+||+||+|+.++... .|+++++|++|+..+++++++
T Consensus       221 ~itI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al  300 (967)
T 3se6_A          221 SIKIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYAL  300 (967)
T ss_dssp             EEEEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHH
T ss_pred             EEEEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHH
Confidence            999999999999999998765544 789999999999999999999999999988754 789999999999988888887


Q ss_pred             Cch-----hhhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCC---------C
Q psy2273         264 DGS-----TWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNP---------N  329 (434)
Q Consensus       264 d~~-----~le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~---------~  329 (434)
                      +..     +|+++      |+.+||+.|||+|+  +|+|++    |||||||||+|+|+.|++   +.+.         .
T Consensus       301 ~~~~~~l~~~e~~------fg~~YP~~k~d~v~--vPdf~~----GaMEn~Glity~e~~ll~---d~~~s~~~~k~~~~  365 (967)
T 3se6_A          301 QASLKLLDFYEKY------FDIYYPLSKLDLIA--IPDFAP----GAMENWGLITYRETSLLF---DPKTSSASDKLWVT  365 (967)
T ss_dssp             HHHHHHHHHHHHH------HTCCCCSSEEEEEE--ESSCSS----SEECCTTEEEEEGGGTCC---CTTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHh------cCCCCCcccccEEE--ecCCCC----cccccCCccccchhheec---CcccCCHHhhHhHH
Confidence            654     24555      55567889999998  599996    999999999999998873   2111         1


Q ss_pred             ccccccchhheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc----ccccccccccccccccCCcCeeccCCc
Q psy2273         330 SIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS----TFSDKSQYALGHNIAEGSWPIPVPSNK  405 (434)
Q Consensus       330 si~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~i~~~~~~  405 (434)
                      .+..++-.+.|+|||||+.||++   .|+||||++|+++...-...|.+    +|..+...+|..|++.++|||..|+++
T Consensus       366 ~vIaHElAHqWFGnlVT~~wW~d---lWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~  442 (967)
T 3se6_A          366 RVIAHELAHQWFGNLVTMEWWND---IWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAET  442 (967)
T ss_dssp             HHHHHHHGGGTBTTTEEESSGGG---THHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCS
T ss_pred             HHHHHHHHHHHhcCccccCCCcc---ccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCC
Confidence            45667778889999999999999   99999999999765443344443    455556789999999999999999999


Q ss_pred             ccccCcccccccchhHh
Q psy2273         406 AVKRLPSEKFDERSWTN  422 (434)
Q Consensus       406 ~~~~~~~~~~~~~~~~~  422 (434)
                      |.+  |.++||.++|..
T Consensus       443 ~~~--i~~~Fd~i~Y~K  457 (967)
T 3se6_A          443 PTQ--IQEMFDEVSYNK  457 (967)
T ss_dssp             HHH--HHHTSSHHHHHH
T ss_pred             HHH--HHHhcchhhhhH
Confidence            999  999999999964

>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*

Probab=100.00  E-value=7.6e-59  Score=521.30  Aligned_cols=348  Identities=19%  Similarity=0.253  Sum_probs=276.6

Q ss_pred             CCcccccCCCCCceEEEEEEEEcCCC-----CcEEEEEEEEEEE------Eeccccceeeeee----EEEccee------
Q psy2273          53 DGVHYVWTQLRPATHYQVDLTGGTYQ-----PYLSGLPDSDLLA------LVLSTHEVQSQSS----VEVGQSF------  111 (434)
Q Consensus        53 ~~~~y~lp~~~lp~hYdL~L~ld~~~-----~~fsG~vtI~~~~------i~l~~~~L~~i~s----V~v~~~~------  111 (434)
                      ....||||....|.||+|+|+++++.     .+|+|+|+|++++      |.||+.+|+ |.+    +.+.+..      
T Consensus         5 P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~-i~~~~~~~~~~~~~~~~~~~   83 (909)
T 4fke_A            5 PWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLN-YTTQGHMVVLRGVGDSQVPE   83 (909)
T ss_dssp             GGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCE-ECCSSSSCEEEESTTCCCCC
T ss_pred             CcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCE-EEeeeeEEEEecCCCcceec
Confidence            46789999999999999999988643     4799999999984      789998888 532    2222100      


Q ss_pred             -------cCCceeeeecCCCCCCCCC--eEEEEEeeecc---cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCC
Q psy2273         112 -------VNPNVVPIFDGHSGLPDSD--LLALDVFEKVA---AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEP  179 (434)
Q Consensus       112 -------~ng~~l~~~~~~~~lp~~~--~L~I~y~g~~~---~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP  179 (434)
                             ..++.+.+ .....++.|.  .|.|.|+|.+.   .|+|+++|.+. |.++|+++|||||.+||+||||||+|
T Consensus        84 ~~~~~~~~~~~~l~i-~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~-~~~~~~~~Tqfep~~AR~~FPc~DeP  161 (909)
T 4fke_A           84 IDRTELVELTEYLVV-HLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEG-NVKKVLATTQMQSTDARKSFPCFDEP  161 (909)
T ss_dssp             EEEEEEETTTTEEEE-EEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEET-TEEEEEEEEECTTTTGGGTSCBCCST
T ss_pred             ccceEEecCCcEEEE-EcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEEC-CceEEEEEEcCcccCcCEEEEeCCcc
Confidence                   01111221 2223455554  49999999874   69999888764 44578888999999999999999999


Q ss_pred             CCcceEEEEEEecCCceEEeecCccceee----cCCeEEEEEEccCCCCceeeEEEEeeeeEeeeee-CCeeEEEEecCC
Q psy2273         180 HFKAYFSLMIRRPHHMSSLSNMPLLKTAE----DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWD-NSIQYKVYAPRN  254 (434)
Q Consensus       180 ~~KAtf~lsI~~P~~~~alSN~~l~~~~~----~~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~-~g~~~~v~~~~~  254 (434)
                      ++||+|+++|++|++|+|+|||++.....    .+|+++++|++|+||||||+||+||+|+.++... +|+++++|++|+
T Consensus       162 ~~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~  241 (909)
T 4fke_A          162 AMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPN  241 (909)
T ss_dssp             TSCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHH
T ss_pred             ccceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecc
Confidence            99999999999999999999999875543    2789999999999999999999999999988776 689999999999


Q ss_pred             Ccccc--ccCCCchh-----hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccC
Q psy2273         255 DSTSW--TKNPDGST-----WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKN  327 (434)
Q Consensus       255 ~~~~~--~~ald~~~-----le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~  327 (434)
                      ..+++  .++++...     |++|      ++.+||+.|||+|+  +|+|++    |||||||||+|+|+.|++   ..+
T Consensus       242 ~~~~~~~~~al~~~~~~l~~~e~~------~~~~Yp~~k~d~v~--vpdf~~----gaMEn~glit~~e~~ll~---d~~  306 (909)
T 4fke_A          242 AIAEGHGMYALNVTGPILNFFANH------YNTSYPLPKSDQIA--LPDFNA----GAMENWGLVTYRENALLF---DPQ  306 (909)
T ss_dssp             HHHTTTTHHHHHHHHHHHHHHHHH------TTSCCSSSEEEEEE--ETTCTT----CEECCTTEEEEEHHHHCC---CTT
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHh------ccCCCCCCcccEEE--ecCCCC----cccccCcccccccceeec---Ccc
Confidence            76544  46665432     3444      56677999999998  599996    999999999999999874   211


Q ss_pred             CC---------ccccccchhheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc----ccc-cccccccccccc
Q psy2273         328 PN---------SIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS----TFS-DKSQYALGHNIA  393 (434)
Q Consensus       328 ~~---------si~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~  393 (434)
                      ..         .+..++-.+.|+|||||+.||++   .|+||||++|+++...-...|.+    .|. .....+|..|++
T Consensus       307 ~s~~~~~~~~~~viaHElAHqWFGnlVT~~~W~d---lWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~  383 (909)
T 4fke_A          307 SSSISNKERVVTVIAHELAHQWFGNLVTLAWWND---LWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDAL  383 (909)
T ss_dssp             TCCHHHHHHHHHHHHHHHHTTTBTTTEEESSGGG---HHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTS
T ss_pred             cCChHHHHHHHHHHHHHHHhhhhcCeecccccCc---ceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhh
Confidence            11         24567778889999999999999   99999999999765544445554    333 456689999999


Q ss_pred             cCCcCeecc---CCcccccCcccccccchhHhh
Q psy2273         394 EGSWPIPVP---SNKAVKRLPSEKFDERSWTNF  423 (434)
Q Consensus       394 ~~s~~i~~~---~~~~~~~~~~~~~~~~~~~~~  423 (434)
                      .++|||.+|   +++|.+  |+++||.++|..=
T Consensus       384 ~~~~pi~~~~~~v~~~~~--i~~~fd~i~Y~KG  414 (909)
T 4fke_A          384 ASSHPLTTPAEEVNTPAQ--ISEMFDSISYSKG  414 (909)
T ss_dssp             TTCCCSCCCGGGCCSHHH--HHTTSSHHHHHHH
T ss_pred             cccCCccccccccCChhh--HHhhhhhHHHHHH
Confidence            999999997   778888  9999999999753

>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...

Probab=100.00  E-value=6.9e-54  Score=462.52  Aligned_cols=349  Identities=12%  Similarity=0.116  Sum_probs=271.8

Q ss_pred             CCcccccCCCCC-ceEEEEEEEEcCCCCcEEEEEEEEEEE-------EeccccceeeeeeEEEcceec----------CC
Q psy2273          53 DGVHYVWTQLRP-ATHYQVDLTGGTYQPYLSGLPDSDLLA-------LVLSTHEVQSQSSVEVGQSFV----------NP  114 (434)
Q Consensus        53 ~~~~y~lp~~~l-p~hYdL~L~ld~~~~~fsG~vtI~~~~-------i~l~~~~L~~i~sV~v~~~~~----------ng  114 (434)
                      |..+|+.|.... +.||+|+|++|+++++|+|+++|++++       |.||+.+|+ |.+|++++..+          +|
T Consensus         3 d~~s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~-I~~V~v~g~~~~~~~~~~~~~~~   81 (608)
T 3u9w_A            3 DTCSLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLT-IEKVVINGQEVKYALGERQSYKG   81 (608)
T ss_dssp             CTTCCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCE-EEEEEETTEECCEEECCCCGGGC
T ss_pred             CcccccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCE-EEEEEECCEEcceeccccccccC
Confidence            556778887664 899999999999999999999999973       778888998 88898843110          12


Q ss_pred             ceeeeecCCCCCCCCC--eEEEEEeeecc-cceeeeeeeecCCCe-eEEEEeccccCCccEEEEcCCCCCCcceEEEEEE
Q psy2273         115 NVVPIFDGHSGLPDSD--LLALDVFEKVA-AKFFEHCSKRLWVSE-RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIR  190 (434)
Q Consensus       115 ~~l~~~~~~~~lp~~~--~L~I~y~g~~~-~G~y~~~~~~~dG~~-~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~  190 (434)
                      ..+.+ ..+..++.+.  .|+|.|.+++. .|++...+.+.+|+. +|++ |||||.+||+||||||+|++||+|+++|+
T Consensus        82 ~~l~I-~l~~~l~~g~~~~l~I~y~~~~~~~~~~~~~~~~~~g~~~~~~~-Tq~ep~~AR~~fPc~D~P~~Katf~i~I~  159 (608)
T 3u9w_A           82 SPMEI-SLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLF-SQCQAIHCRAILPCQDTPSVKLTYTAEVS  159 (608)
T ss_dssp             EEEEE-EEEEEECTTCEEEEEEEEECCTTCTTEEEECGGGSSSSSSCEEE-ECCTTTTGGGTSCBCCSTTCCEEEEEEEE
T ss_pred             ceEEE-EcCCCCCCCCEEEEEEEEEEEcCCCceeeecccccCCCcceEEE-EcccCCCCCEEEEecCccceeEEEEEEee
Confidence            22222 1222334444  38999999874 566554444555554 5665 99999999999999999999999999999


Q ss_pred             ecCCceEEeecCccceeec---CCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCccccccCCCchh
Q psy2273         191 RPHHMSSLSNMPLLKTAED---GESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGST  267 (434)
Q Consensus       191 ~P~~~~alSN~~l~~~~~~---~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~~~ald~~~  267 (434)
                      +|++|+|+|||++......   +++++++|++++|||+||+||+||+|+..+.   |+++++|++|+..+.+.++++...
T Consensus       160 ~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~---~~~~~v~~~p~~~~~~~~~~~~~~  236 (608)
T 3u9w_A          160 VPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQI---GPRTLVWSEKEQVEKSAYEFSETE  236 (608)
T ss_dssp             EETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEEE---ETTEEEEECHHHHHHHHHHTTTHH
T ss_pred             CCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEec---CCceEEEeChhhHHHHHHHHHHHH
Confidence            9999999999987655433   5789999999999999999999999998876   788999999999888877766432


Q ss_pred             --hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCCccccccchhheeccce
Q psy2273         268 --WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLM  345 (434)
Q Consensus       268 --le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~si~~~~~~~~~~~~l~  345 (434)
                        ++.|   +.++ -+||+.++|+|++ +|+|++    ||||||||++++|+.+..   ...-..+..++-.|.|+||||
T Consensus       237 ~~l~~~---e~~~-g~Yp~~~~~~vv~-~p~f~~----GgMEn~gl~~~~~~~l~~---~~~~~~viaHElAHqWfGnlV  304 (608)
T 3u9w_A          237 SMLKIA---EDLG-GPYVWGQYDLLVL-PPSFPY----GGMENPCLTFVTPTLLAG---DKSLSNVIAHEISHSWTGNLV  304 (608)
T ss_dssp             HHHHHH---HHHH-CCCCSSCCEEEEC-CTTCSS----SEECCTTEEEECGGGCCS---SSTTTHHHHHHHHTTTBTTTE
T ss_pred             HHHHhH---HhcC-CCCCchhhceeee-cccccc----hhhhcCcceeeeeeeecc---cchhHHHHHHHhhhhhhcCcC
Confidence              2111   2223 3689999999887 799995    999999999999998874   233456788999999999999


Q ss_pred             eecCCCCCcchhhhhhhhhhcCCCCCcccCCCcc----cc-cccccccccccccCCcCeeccCCcccccCcccccccchh
Q psy2273         346 SVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNST----FS-DKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSW  420 (434)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~~  420 (434)
                      |+.||++   .|+|||+++|++........++..    +. .....+...|++.++||+..|+.++.+.-+.++||.++|
T Consensus       305 T~~~W~d---~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y  381 (608)
T 3u9w_A          305 TNKTWDH---FWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPY  381 (608)
T ss_dssp             EESSGGG---HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHH
T ss_pred             ccccccc---hhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHH
Confidence            9999999   999999999997554433333321    11 112244556889999999999999888556789999999


Q ss_pred             Hh
Q psy2273         421 TN  422 (434)
Q Consensus       421 ~~  422 (434)
                      ..
T Consensus       382 ~K  383 (608)
T 3u9w_A          382 EK  383 (608)
T ss_dssp             HH
T ss_pred             hH
Confidence            75

>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*

Probab=100.00  E-value=8.4e-53  Score=465.58  Aligned_cols=324  Identities=20%  Similarity=0.260  Sum_probs=261.2

Q ss_pred             CceEEEEEEEEcCCCCcEEEEEEEEEE---EEeccccceeeeeeEEEcce----ecCCceeeeecCCCCCCCCCeEEEEE
Q psy2273          64 PATHYQVDLTGGTYQPYLSGLPDSDLL---ALVLSTHEVQSQSSVEVGQS----FVNPNVVPIFDGHSGLPDSDLLALDV  136 (434)
Q Consensus        64 lp~hYdL~L~ld~~~~~fsG~vtI~~~---~i~l~~~~L~~i~sV~v~~~----~~ng~~l~~~~~~~~lp~~~~L~I~y  136 (434)
                      .|.||+|+|++++++.+|+|+++|+ .   .|.||...|+ |.+|++.+.    ..++..+.+ ...   ++...|.|.|
T Consensus         2 ~p~hY~l~l~~~~~~~~f~G~v~I~-~~~~~i~L~~~~l~-I~~v~~~g~~~~~~~~~~~l~i-~~~---~g~~~l~i~y   75 (780)
T 1z5h_A            2 EVEKYDLTLDFDIQKRTFNGTETIT-ADAGDIVLDAVGLQ-INWMKVNGRDTAFTYDGQTVRA-PGD---SQPQKIEISF   75 (780)
T ss_dssp             CEEEEEEEEEEETTTTEEEEEEEEE-ECSSCEEEECSSCE-EEEEEETTEECCCEECSSEEEE-CCC---SSSEEEEEEE
T ss_pred             EEEEEEEEEEEECCCCEEEEEEEEE-cCCCEEEEEccCCE-EEEEEEeceeccEEEECCEEEE-EeC---CccEEEEEEE
Confidence            4899999999999999999999993 3   3788988898 888888431    112222322 221   2222599999


Q ss_pred             eeec---ccceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCCceEEeecCccceeecCCeE
Q psy2273         137 FEKV---AAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESR  213 (434)
Q Consensus       137 ~g~~---~~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~~~alSN~~l~~~~~~~g~~  213 (434)
                      +|.+   ..|+|++.|.      +++++|||||.+||+||||||+|++||+|+++|++|++|+|+|||++.+. ..+|++
T Consensus        76 ~g~~~~~~~G~y~~~y~------~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN~~~~~~-~~~g~~  148 (780)
T 1z5h_A           76 AGKVSDSLSGIYYAGRE------NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMPPKRI-EVSERK  148 (780)
T ss_dssp             EEECBSSSSEEEEESST------TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEESSCEEEE-EESSSE
T ss_pred             EEEeCCCcccceecccc------ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeCCccccc-cCCCce
Confidence            9986   3689986542      33555999999999999999999999999999999999999999998764 347889


Q ss_pred             EEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCccccccCCCch-----hhhhhhccccccCCCCCcccee
Q psy2273         214 VDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGS-----TWENARNSTSSWTKNLDRTTWD  288 (434)
Q Consensus       214 ~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~~~ald~~-----~le~yf~~~~~~~~kyp~~k~D  288 (434)
                      +++|++++|||+||+||+||+|+.++....|+++++|++|+  ++++++++..     +++++      |+.+||+.|||
T Consensus       149 ~~~f~~t~~mstYL~a~~vg~f~~~~~~~~gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~------fg~~YP~~k~d  220 (780)
T 1z5h_A          149 VVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKD--IRSKYPLDMARKSVEFYENY------FGIPYALPKMH  220 (780)
T ss_dssp             EEEECCCCSBCGGGCCEEEECCEEEEEEETTEEEEEEESSC--CCCSHHHHHHHHHHHHHHHH------HSSCCSSSEEE
T ss_pred             EEEEecCCcccceEEEEEEeccEEEeeccCCeeEEEEEccc--hhHHHHHHHHHHHHHHHHHH------hCCCCCCccCC
Confidence            99999999999999999999999998776789999999999  6677776643     24555      55567899999


Q ss_pred             eeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCC--------CccccccchhheeccceeecCCCCCcchhhhh
Q psy2273         289 NIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNP--------NSIFSDKSQYALVKNLMSVPGSNKPAGSWENA  360 (434)
Q Consensus       289 qV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~--------~si~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  360 (434)
                      +|+  +|+|++    |||||||+++|+|+.+++.   ...        ..+..++-.|.|+|||||+.||++   .|+||
T Consensus       221 ~v~--vpdf~~----GaMEn~glit~~e~~ll~~---~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~d---lWLnE  288 (780)
T 1z5h_A          221 LIS--VPEFGA----GAMENWGAITFREIYMDIA---ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWND---LWLNE  288 (780)
T ss_dssp             EEE--ETTCTT----CEECCTTEEEEEHHHHSCC---TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGG---HHHHH
T ss_pred             EEE--cCCCCC----CcccccCeeEeecceEeec---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCccc---ccccH
Confidence            998  599985    9999999999999988742   111        146678888899999999999999   99999


Q ss_pred             hhhhhcCCCCCcccCCCc----ccc-cccccccccccccCCcCeeccCCcccccCcccccccchhHh
Q psy2273         361 IQKSSQNDSSSWTKNPNS----TFS-DKSQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERSWTN  422 (434)
Q Consensus       361 ~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~~~~  422 (434)
                      |+++|+++...-...|++    .|. .....+|..|++.++|||..++.+|.+  |+++||.++|..
T Consensus       289 GfA~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~--~~~~fd~i~Y~K  353 (780)
T 1z5h_A          289 SFATFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDE--ISQIFDEISYGK  353 (780)
T ss_dssp             HHHHHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCC--TTTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHH--HHHhcchhhhhh
Confidence            999999765443344544    344 345678899999999999999999999  999999999964

>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*

Probab=100.00  E-value=2e-49  Score=441.42  Aligned_cols=328  Identities=11%  Similarity=0.084  Sum_probs=249.5

Q ss_pred             ceEEEEEEEEcCCCCcEEEEEEEEEE------EEeccccceeeeeeEEEccee--------cCCceeeeecCCCCCCCCC
Q psy2273          65 ATHYQVDLTGGTYQPYLSGLPDSDLL------ALVLSTHEVQSQSSVEVGQSF--------VNPNVVPIFDGHSGLPDSD  130 (434)
Q Consensus        65 p~hYdL~L~ld~~~~~fsG~vtI~~~------~i~l~~~~L~~i~sV~v~~~~--------~ng~~l~~~~~~~~lp~~~  130 (434)
                      +.||+|+|+++++++.++|+++|+++      .+.||..+|+ |.+|++++..        .+|+.+.+ .... ++.+.
T Consensus        16 V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~-I~sV~vnG~~l~~~~~~~~~~~~L~I-~l~~-l~~~~   92 (889)
T 3ebh_A           16 INQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLK-INEISINNKKLVEGEEYTYDNEFLTI-FSKF-VPKSK   92 (889)
T ss_dssp             EEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCE-EEEEEETTEECCBTTTEEECSSEEEE-CGGG-SCSSS
T ss_pred             EEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCE-EEEEEECCEEcCcccceEecCCEEEE-ecCC-CCCCc
Confidence            69999999999999999999999986      3778888888 8889885421        12333433 2121 44344


Q ss_pred             -eEEEEEeeecc-----cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCC-ce-EEeecC
Q psy2273         131 -LLALDVFEKVA-----AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHH-MS-SLSNMP  202 (434)
Q Consensus       131 -~L~I~y~g~~~-----~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~-~~-alSN~~  202 (434)
                       .|+|.|.+.+.     .|+|++     ++   +++ |||||++||+||||||+|++||+|+++|++|++ |. ++|||+
T Consensus        93 ~~l~I~y~~~p~~~~~l~Gly~s-----~~---~~~-TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~~~valSNg~  163 (889)
T 3ebh_A           93 FAFSSEVIIHPETNYALTGLYKS-----KN---IIV-SQCEATGFRRITFFIDRPDMMAKYDVTVTADKEKYPVLLSNGD  163 (889)
T ss_dssp             EEEEEEEEECGGGCTTCSEEEEE-----TT---EEE-EECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTTCCEEEESSE
T ss_pred             EEEEEEEEecCccCCCceeeEEE-----CC---eEE-EcccCCCCCEEEEEcCCCCcceEEEEEEEEccccCeEEEccCc
Confidence             48999988762     488863     22   455 999999999999999999999999999999997 85 699998


Q ss_pred             ccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee----CC--eeEEEEecCCCccccccCCCchh-----hhh
Q psy2273         203 LLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD----NS--IQYKVYAPRNDSTSWTKNPDGST-----WEN  270 (434)
Q Consensus       203 l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~----~g--~~~~v~~~~~~~~~~~~ald~~~-----le~  270 (434)
                      +.+.... +|+++++|++++|||+||+||+||+|+.++...    +|  +++++|++|+..++++++++...     |+.
T Consensus       164 l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~~~~l~~~e~  243 (889)
T 3ebh_A          164 KVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECLKKSMAFDED  243 (889)
T ss_dssp             EEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHHHHHHHHHHH
T ss_pred             cccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHHHHHHHHHHH
Confidence            8776543 789999999999999999999999999987642    33  78999999999988888776542     455


Q ss_pred             hhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCC------Cccccccchhheeccc
Q psy2273         271 ARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNP------NSIFSDKSQYALVKNL  344 (434)
Q Consensus       271 yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~------~si~~~~~~~~~~~~l  344 (434)
                      +      |+.+||+.|||+|+  +|+|+.    ||||||||++|+|+.+++..-+...      ..+..++--|.|+|||
T Consensus       244 ~------fG~pYP~~kyd~Va--vPdF~~----GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNl  311 (889)
T 3ebh_A          244 Y------FGLEYDLSRLNLVA--VSDFNV----GAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNR  311 (889)
T ss_dssp             H------HCCCCCSSEEEEEE--ESCCSS----SEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTT
T ss_pred             H------HCCCCCCCceEEEE--eccccc----hhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCe
Confidence            5      55667899999988  599995    9999999999999988742111011      2467788899999999


Q ss_pred             eeecCCCCCcchhhhhhhhhhcCCCCCccc-CCCc-ccccc---cccccccccccCCcCeeccCCcccccCcccccccch
Q psy2273         345 MSVPGSNKPAGSWENAIQKSSQNDSSSWTK-NPNS-TFSDK---SQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFDERS  419 (434)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~---~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~~  419 (434)
                      ||+.||++   .|+|||+++|++....... .+.. .+.+.   ...++..|+...+|||..  +.+.+  |.++||.++
T Consensus       312 VT~~~W~d---lWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~e--i~~~f~~i~  384 (889)
T 3ebh_A          312 VTLRDWFQ---LTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVS--MENFYTTTV  384 (889)
T ss_dssp             BEESSGGG---HHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESC--GGGCCCHHH
T ss_pred             eeeccccc---ceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhh--hhhhccchh
Confidence            99999999   9999999999852211111 1111 11110   113456688889999863  34455  889999999


Q ss_pred             hHhh
Q psy2273         420 WTNF  423 (434)
Q Consensus       420 ~~~~  423 (434)
                      |..=
T Consensus       385 Y~KG  388 (889)
T 3ebh_A          385 YDKG  388 (889)
T ss_dssp             HHHH
T ss_pred             hhHH
Confidence            9753

>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*

Probab=100.00  E-value=3.5e-49  Score=427.64  Aligned_cols=354  Identities=16%  Similarity=0.158  Sum_probs=258.5

Q ss_pred             CCccchhhccccCCCCccCCCCCCCcccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE----------Eeccccce
Q psy2273          30 STQSITEVNLCCRGSVRFQSTSIDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA----------LVLSTHEV   99 (434)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~t~~~~~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~----------i~l~~~~L   99 (434)
                      ||+++++++++...|..|      ..+|++|....|.||+|+|++|+++++|+|+++|++++          |.||...|
T Consensus         1 ~~~~~~~~~~~~~~~~~d------~~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l   74 (632)
T 2xq0_A            1 MLPLSIEQRRPSRSPEYD------QSTLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYL   74 (632)
T ss_dssp             CCCHHHHHHSCSSSSCCC------TTCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSE
T ss_pred             CcchhhhhcccccCCCCC------cccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCC
Confidence            688999999999998765      45667788888999999999999999999999999862          56777788


Q ss_pred             eeeeeEEEcceecCCceeee-ec------CCC---CCC--CCC-eEEEEEeeecc-cceeeeeeeecCCCeeEEEEeccc
Q psy2273         100 QSQSSVEVGQSFVNPNVVPI-FD------GHS---GLP--DSD-LLALDVFEKVA-AKFFEHCSKRLWVSERYVASTVFE  165 (434)
Q Consensus       100 ~~i~sV~v~~~~~ng~~l~~-~~------~~~---~lp--~~~-~L~I~y~g~~~-~G~y~~~~~~~dG~~~yl~~Tq~e  165 (434)
                      + |.+|++.     |+.+.+ .+      +..   .++  ++. .|+|.|+|.+. .|++.......+|+.+|++ ||||
T Consensus        75 ~-I~~v~v~-----g~~~~~~~~~~~~~~~~~l~I~l~~~g~~~~l~I~Y~g~~~~~gl~~~~~~~~~g~~~~~~-Tq~e  147 (632)
T 2xq0_A           75 D-VQEVHID-----GSKADFQIEQRKEPLGSRLVINNASCNDNFTLNIQFRTTDKCTALQWLNSKQTKGGKPYVF-SQLE  147 (632)
T ss_dssp             E-EEEEEET-----TEECCEEECCCBTTTBCCEEEECCCSSSEEEEEEEEEECTTCSSEEEECTTTSTTSSCEEE-ECCT
T ss_pred             E-EEEEEEC-----CeecceEEcccccccCcEEEEEecCCCCEEEEEEEEeeecCcCcceeecccccCCCceEEE-eccc
Confidence            8 8888873     433322 00      000   112  222 48999999874 5664322222345446666 9999


Q ss_pred             cCCccEEEEcCCCCCCcceEEEEEEecCCceEEeec-CccceeecCCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCC
Q psy2273         166 PNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNM-PLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS  244 (434)
Q Consensus       166 p~~AR~~FPCfDeP~~KAtf~lsI~~P~~~~alSN~-~l~~~~~~~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g  244 (434)
                      |.+||+||||||+|++||+|+++|++|  ++|++|+ +.......++  +++|++++|||+||+||+||+|+..+.   |
T Consensus       148 p~~AR~~fPc~D~P~~Katf~i~I~~p--~~vv~sg~~~~~~~~~~~--~~~F~~t~pmstYLva~~vg~f~~~~~---g  220 (632)
T 2xq0_A          148 AIHARSLFPCFDTPSVKSTFTASIESP--LPVVFSGIRIEDTSKDTN--IYRFEQKVPIPAYLIGIASGDLSSAPI---G  220 (632)
T ss_dssp             TTTGGGTSCBCCSTTCCEEEEEEEECS--SCEEESSEECCCC----C--EEEEEEEEEECGGGCCEEESSCEEEEE---E
T ss_pred             cCCcceeeeecCCcccceEEEEEEEEc--hHHhccCccccceecCCC--eEEEEeCCccchhheeeeEecceeecc---C
Confidence            999999999999999999999999999  8888554 4433322223  799999999999999999999999886   6


Q ss_pred             eeEEEEecCCCccccccCCC-ch--hhhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccc
Q psy2273         245 IQYKVYAPRNDSTSWTKNPD-GS--TWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDS  321 (434)
Q Consensus       245 ~~~~v~~~~~~~~~~~~ald-~~--~le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~  321 (434)
                      +++++|++|+..+.+.++++ ..  .++.|   +.+|+ +||+.+||+|++ .|+|++    |||||||++ |++..++.
T Consensus       221 ~~~~v~~~p~~~~~~~~~~~~~~~~~l~~~---e~~fG-pYP~~k~d~v~~-pp~f~~----GgMEn~glt-~~~~~ll~  290 (632)
T 2xq0_A          221 PRSTVYTEPFRLKDCQWEFENDVEKFIQTA---EKIIF-EYEWGTYDILVN-VDSYPY----GGMESPNMT-FATPTLLA  290 (632)
T ss_dssp             TTEEEEECHHHHHHHHHHHTTTHHHHHHHH---HHHSC-CCCSSCCCEEEC-CTTCCS----SEECCTTCE-EECGGGCC
T ss_pred             CeeEEEEccchHHHHHHHHHHHHHHHHHHH---HHhcc-cCCcccccEEEE-CCCCCC----CccccceEE-Eeeceecc
Confidence            78999999998777765554 22  12111   33366 789999999885 579995    999999985 55555443


Q ss_pred             cccccCCCccccccchhheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc--cccc-----cccccccccccc
Q psy2273         322 SSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSD-----KSQYALGHNIAE  394 (434)
Q Consensus       322 ~~~t~~~~si~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~  394 (434)
                      .  ......+..++-.+.|+|||||+.||++   .|+|||+++|+++...-...|+.  .|..     ....+  +|.+.
T Consensus       291 ~--~~~~~~viaHElAHqWfGnlVT~~~W~d---lWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~  363 (632)
T 2xq0_A          291 H--DRSNIDVIAHELAHSWSGNLVTNCSWNH---FWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMK  363 (632)
T ss_dssp             S--SSCSTHHHHHHHHHTTBTTTEEESSGGG---THHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCS
T ss_pred             C--chhHHHHHHHHHHHHHhcCCCccCCcch---hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcc
Confidence            1  1233467789999999999999999999   99999999999755444334432  2221     01122  25667


Q ss_pred             CCcC---eeccCCcccccCcccccccchhHh
Q psy2273         395 GSWP---IPVPSNKAVKRLPSEKFDERSWTN  422 (434)
Q Consensus       395 ~s~~---i~~~~~~~~~~~~~~~~~~~~~~~  422 (434)
                      ++||   |..++..+..  +.++||.++|..
T Consensus       364 ~~~pl~~l~~~~~~~~~--~~~~f~~i~Y~K  392 (632)
T 2xq0_A          364 DPERFSTLVQNLNDNTD--PDDAFSTVPYEK  392 (632)
T ss_dssp             SHHHHTSSSCCCCSSSC--GGGGCSSHHHHH
T ss_pred             cCCCCcccccCCCCCCC--hHHhccchhhHH
Confidence            8899   5566654555  789999999974

>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}

Probab=100.00  E-value=2.9e-48  Score=418.47  Aligned_cols=343  Identities=14%  Similarity=0.111  Sum_probs=250.8

Q ss_pred             CCCcccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEEE-------EeccccceeeeeeEEE-cceecCC--ceeee-e
Q psy2273          52 IDGVHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLLA-------LVLSTHEVQSQSSVEV-GQSFVNP--NVVPI-F  120 (434)
Q Consensus        52 ~~~~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~~-------i~l~~~~L~~i~sV~v-~~~~~ng--~~l~~-~  120 (434)
                      .|..+|++|....|.||+|+|++|+++++|+|+++|++++       |.||...|+ |.+|++ ..   +|  +.+.+ .
T Consensus        15 ~d~~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~-I~~v~v~~~---~g~~~~~~~~~   90 (605)
T 3cia_A           15 TDAYTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLV-IHRVMAKNS---QGQWVKVNYDL   90 (605)
T ss_dssp             CCSSCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEE-EEEEEEECT---TCCEEEECEEE
T ss_pred             CCcccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCE-EEEEEEEcC---CCCccceeEEe
Confidence            4667788898888999999999999999999999999973       678888888 888887 30   13  33221 0


Q ss_pred             c------CC---CCCCCCC-eEEEEEeeecc-cceeeeeeeecCCC-eeEEEEeccccCCccEEEEcCCCCCCcceEEEE
Q psy2273         121 D------GH---SGLPDSD-LLALDVFEKVA-AKFFEHCSKRLWVS-ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLM  188 (434)
Q Consensus       121 ~------~~---~~lp~~~-~L~I~y~g~~~-~G~y~~~~~~~dG~-~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~ls  188 (434)
                      +      +.   ..++.+. .|+|.|+|.+. .|++...+...+|+ .+|++ |||||.+||+||||||+|++||+|+++
T Consensus        91 ~~~~~~~~~~l~i~l~~~~~~l~i~y~~~~~~~gl~~~~~~~~~g~~~~~~~-Tq~ep~~AR~~fPc~D~P~~katf~i~  169 (605)
T 3cia_A           91 AKRDDVLGSKLTINTPLNAKKVRVYYNSTEKATGLQWLSAEQTAGKEKPFLF-SQNQAIHARSWIPIQDTPSVRVTYTAR  169 (605)
T ss_dssp             EEECSSSCEEEEECCCTTCSEEEEEEEECTTCTTEEEECGGGSSSSSSCEEE-ECCTTTTGGGTSCBCCCTTCCEEEEEE
T ss_pred             cCccccCCCeEEEEeCCceEEEEEEEEEecCCCceEEecccccCCCcccEEE-ecCcccChhhceecCCCcCceeEEEEE
Confidence            0      00   0122233 59999999874 57654322223444 45665 999999999999999999999999999


Q ss_pred             EEecCCceEEeecCccceeecCCeEEEEEEccCCCCceeeEEEEeeeeEeeeeeCCeeEEEEecCCCccccccCCCchh-
Q psy2273         189 IRRPHHMSSLSNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQYKVYAPRNDSTSWTKNPDGST-  267 (434)
Q Consensus       189 I~~P~~~~alSN~~l~~~~~~~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~~g~~~~v~~~~~~~~~~~~ald~~~-  267 (434)
                      |++|++|+|+||+........+|  +++|++++|||+||+||+||+|+..+.   |+++++|++|+..+.++++++... 
T Consensus       170 i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~~---g~~~~v~~~p~~~~~~~~~~~~~~~  244 (605)
T 3cia_A          170 ITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKAM---SHQTGIYAESYILDAAVAEFDDTQA  244 (605)
T ss_dssp             EECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEES---SSSEEEEECSTTHHHHHHHSTTHHH
T ss_pred             EEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEecC---CCeEEEEeccChHHHHHHHHHHHHH
Confidence            99999999998774332222244  799999999999999999999999875   788999999999887766665331 


Q ss_pred             -hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccCCCccccccchhheecccee
Q psy2273         268 -WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMS  346 (434)
Q Consensus       268 -le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~~~si~~~~~~~~~~~~l~~  346 (434)
                       ++.   ++.+|+ +||+.+||+|++ .|+|++    |||||||+ +|++..++.+  ...-..+..++-.+.|+|||||
T Consensus       245 ~l~~---~e~~fG-~YP~~k~d~v~~-p~~f~~----GgMEn~gl-tf~~~~ll~~--~~~~~~viaHElaHqWfGnlVT  312 (605)
T 3cia_A          245 MIDK---AEQMYG-KYRWGRYDLLML-PPSFPF----GGMENPRL-SFITPTVVAG--DKSLVNLIAHELAHSWSGNLVT  312 (605)
T ss_dssp             HHHH---HHHHHC-CCTTSCEEEEEC-CTTCSS----SEECCTTE-EEECGGGCCS--SSCSTHHHHHHHHHTTBTTTEE
T ss_pred             HHHH---HHHHhC-CCCCccccEEEE-CCccCC----CcccCCcE-EEecchhccC--cHHHHHHHHHHHHHHhhccccc
Confidence             111   123356 689999999885 579995    99999997 5777666532  1233467789999999999999


Q ss_pred             ecCCCCCcchhhhhhhhhhcCCCCCcccCCCc--cccccc-cccc--ccccc-cCCcCeeccCCcccccCcccccccchh
Q psy2273         347 VPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSDKS-QYAL--GHNIA-EGSWPIPVPSNKAVKRLPSEKFDERSW  420 (434)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~--~~~~~-~~s~~i~~~~~~~~~~~~~~~~~~~~~  420 (434)
                      +.||++   .|+|||+++|+++...-...|+.  .|.... ...|  .+|.+ .++|||.+++. +..  +.++||.++|
T Consensus       313 ~~~W~d---lWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~pl~~~~~-~~~--~~~~f~~i~Y  386 (605)
T 3cia_A          313 NESWRD---LWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEILELDASDTQLYIDLK-GRD--PDDAFSGVPY  386 (605)
T ss_dssp             ESSTTS---THHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSCTTTTSSSCCCT-TCC--TTTSCCSHHH
T ss_pred             cCcchH---hHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhhccCCCCcccCCC-CCC--hhHhhCccch
Confidence            999999   99999999999754443323332  222100 0111  11445 78999988876 344  7789999999


Q ss_pred             Hh
Q psy2273         421 TN  422 (434)
Q Consensus       421 ~~  422 (434)
                      ..
T Consensus       387 ~K  388 (605)
T 3cia_A          387 VK  388 (605)
T ss_dssp             HH
T ss_pred             hH
Confidence            75

>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}

Probab=100.00  E-value=2.5e-46  Score=417.54  Aligned_cols=333  Identities=11%  Similarity=0.073  Sum_probs=250.6

Q ss_pred             cccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEE----EEeccccceeeeeeEEEccee----cCCceeeeecCCCCC
Q psy2273          55 VHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLL----ALVLSTHEVQSQSSVEVGQSF----VNPNVVPIFDGHSGL  126 (434)
Q Consensus        55 ~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~----~i~l~~~~L~~i~sV~v~~~~----~ng~~l~~~~~~~~l  126 (434)
                      ..|++|+..+ .||+|+++++++.++++|+++|++.    .+.||..+ + |.+|++.+..    .++..+.+ .   .+
T Consensus         9 ~~y~~~~~~v-~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~i~Ld~~~-~-I~sv~v~g~~~~~~~~~~~L~I-~---~l   81 (867)
T 2gtq_A            9 KDYQTPAYHI-LKTDLHFDINEPQTVVKSRLTVEPQRVGEPLVLDGSA-K-LLSVKINGAAADYVLEGETLTI-A---GV   81 (867)
T ss_dssp             GGCCCCSEEE-EEEEEEEEECSSCEEEEEEEEEEESSTTSCEEEECCS-E-EEEEEETTEECCCEEETTEEEE-S---CC
T ss_pred             cccCCCCCce-eEEEEEEEEECCcEEEEEEEEEEEeCCCCEEEEecCC-C-EEEEEECCeecceEeeCCEEEE-E---ec
Confidence            4567777666 4899999999988899999999874    47888888 7 8888884321    12223332 1   24


Q ss_pred             CCCC-eEEEEEeeec-----ccceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCC-c-eEE
Q psy2273         127 PDSD-LLALDVFEKV-----AAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHH-M-SSL  198 (434)
Q Consensus       127 p~~~-~L~I~y~g~~-----~~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~-~-~al  198 (434)
                      |.+. .|+|.|.+.+     ..|+|++     ++    +++|||||.+||+||||||+|++||+|+++|++|++ | +++
T Consensus        82 p~g~~~l~I~y~~~p~~~~~~~Gly~s-----~~----~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt~p~~~y~~~l  152 (867)
T 2gtq_A           82 PSERFTVEVETEILPAENKSLMGLYAS-----GG----NLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLL  152 (867)
T ss_dssp             CSSCEEEEEEEEECGGGCCSCSEEEEE-----TT----EEEEECTTTTGGGTSCBCCSTTCCBEEEEEEEEETTTCCEEE
T ss_pred             CCCcEEEEEEEEEeccCCCCCcEEEEE-----CC----EEEEeeccCCCceeeccCCCCCcceEEEEEEEEccccceEEE
Confidence            5344 4889998765     2488863     12    445999999999999999999999999999999997 6 899


Q ss_pred             eecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee---C--CeeEEEEecCCCccccccCCCch-----h
Q psy2273         199 SNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD---N--SIQYKVYAPRNDSTSWTKNPDGS-----T  267 (434)
Q Consensus       199 SN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~---~--g~~~~v~~~~~~~~~~~~ald~~-----~  267 (434)
                      |||++.+.... +|+++++|+.++|||+||+||++|+|+.++...   +  ++++++|++|+..++++++++..     .
T Consensus       153 SNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l~~  232 (867)
T 2gtq_A          153 SNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFAVESLKNAMKW  232 (867)
T ss_dssp             ESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHHHHHHHHHHHH
T ss_pred             eCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHHHHHHHHHHHH
Confidence            99998776543 788999999999999999999999999988742   2  48999999999988887776644     2


Q ss_pred             hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccC------CCccccccchhhee
Q psy2273         268 WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKN------PNSIFSDKSQYALV  341 (434)
Q Consensus       268 le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~------~~si~~~~~~~~~~  341 (434)
                      ++.+      |+.+||+.+||+|+  +|+|+.    ||||||||++|+|+.++...-+..      -..+..++--|.|+
T Consensus       233 ~e~~------fG~pYP~~k~d~Va--vpdf~~----GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWf  300 (867)
T 2gtq_A          233 DETR------FGLEYDLDIFMVVA--VGDFNM----GAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWT  300 (867)
T ss_dssp             HHHH------HCCCCCSSEEEEEE--ESSCSS----SEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTB
T ss_pred             HHHH------hCCCCCCcceeEEE--cCCCCc----cccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhc
Confidence            4555      55567999999987  699995    999999999999998874211100      02566788889999


Q ss_pred             ccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc--ccccc---cccccccccccCCcCeeccCCcccccCcccccc
Q psy2273         342 KNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSDK---SQYALGHNIAEGSWPIPVPSNKAVKRLPSEKFD  416 (434)
Q Consensus       342 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~  416 (434)
                      ||+||+.||+.   .|+|||+++|++...........  .+.+.   ...++..|+...+|||..  .++.+  |.++||
T Consensus       301 GnlVT~~~W~d---lWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~--i~~~f~  373 (867)
T 2gtq_A          301 GNRVTCRDWFQ---LSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEE--MNNFYT  373 (867)
T ss_dssp             TTTBEESSGGG---HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESC--GGGGCS
T ss_pred             CcEEEeccccc---ccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhh--hhhhcc
Confidence            99999999998   99999999998421111111100  11110   123466788889999975  34555  889999


Q ss_pred             cchhHh
Q psy2273         417 ERSWTN  422 (434)
Q Consensus       417 ~~~~~~  422 (434)
                      .++|..
T Consensus       374 ~i~Y~K  379 (867)
T 2gtq_A          374 MTVYEK  379 (867)
T ss_dssp             HHHHHH
T ss_pred             chhhhH
Confidence            999975

>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*

Probab=100.00  E-value=1.9e-46  Score=418.74  Aligned_cols=333  Identities=12%  Similarity=0.067  Sum_probs=250.3

Q ss_pred             cccccCCCCCceEEEEEEEEcCCCCcEEEEEEEEEE-----EEeccccceeeeeeEEEcceecCCcee-ee-ecCC----
Q psy2273          55 VHYVWTQLRPATHYQVDLTGGTYQPYLSGLPDSDLL-----ALVLSTHEVQSQSSVEVGQSFVNPNVV-PI-FDGH----  123 (434)
Q Consensus        55 ~~y~lp~~~lp~hYdL~L~ld~~~~~fsG~vtI~~~-----~i~l~~~~L~~i~sV~v~~~~~ng~~l-~~-~~~~----  123 (434)
                      ..|++|...+ .||+|+|+++++.++++|+++|+++     .+.||...|+ |.+|++.     |+++ .+ .+..    
T Consensus        32 ~~y~~~~~~v-~~~~L~l~l~~~~~~v~g~~~i~~~~~~~~~l~Ld~~~L~-I~sV~v~-----G~~l~~y~~~~~~L~I  104 (891)
T 3b34_A           32 HDYRAPDYQI-TDIDLTFDLDAQKTVVTAVSQAVRHGASDAPLRLNGEDLK-LVSVHIN-----DEPWTAWKEEEGALVI  104 (891)
T ss_dssp             GGCCCCSEEE-EEEEEEEECCSSCEEEEEEEEEEECSCTTCCEEEECSSCE-EEEEEET-----TEECCSEEEETTEEEE
T ss_pred             hhCCCCCcee-EEEEEEEEEECCceEEEEEEEEEEccCCCCEEEEECCCCE-EEEEEEc-----CEEcceEEeeCCEEEE
Confidence            4455666555 5899999999988899999999875     3788888888 8888884     4433 21 0111    


Q ss_pred             CCCCCCCeEEEEEeeecc-----cceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEecCC-c-e
Q psy2273         124 SGLPDSDLLALDVFEKVA-----AKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHH-M-S  196 (434)
Q Consensus       124 ~~lp~~~~L~I~y~g~~~-----~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~P~~-~-~  196 (434)
                      ..+|....|+|.|.+.+.     .|+|++     +|    +++|||||.+||+||||||+|++||+|+++|++|++ | +
T Consensus       105 ~~lp~~~~l~I~y~~~p~~~~~l~Gly~s-----~~----~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~~p~~~y~~  175 (891)
T 3b34_A          105 SNLPERFTLKIINEISPAANTALEGLYQS-----GD----ALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKIKYPF  175 (891)
T ss_dssp             CSCCSEEEEEEEEEECGGGCCSCCEEEEE-----TT----EEEEECTTTTGGGTSSBCCSTTCCEEEEEEEEEETTTCCE
T ss_pred             EeCCCeEEEEEEEEEeecccCCCceEEEe-----CC----EEEeccccCCCCccccCCCCcccceEEEEEEEeccccceE
Confidence            024432348999988652     488873     22    445999999999999999999999999999999997 6 8


Q ss_pred             EEeecCccceeec-CCeEEEEEEccCCCCceeeEEEEeeeeEeeeee---C--CeeEEEEecCCCccccccCCCch----
Q psy2273         197 SLSNMPLLKTAED-GESRVDHFQESMPMSPYLLCFTVGSFESLTLWD---N--SIQYKVYAPRNDSTSWTKNPDGS----  266 (434)
Q Consensus       197 alSN~~l~~~~~~-~g~~~~~F~~t~pmstYLvA~~vGdf~~~~~~~---~--g~~~~v~~~~~~~~~~~~ald~~----  266 (434)
                      ++|||++.+.... +|+++++|+.++|||+||+||+||+|+.++...   +  ++++++|++|+..++++++++..    
T Consensus       176 alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~al~~~~~~l  255 (891)
T 3b34_A          176 LLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWAMTSLKNSM  255 (891)
T ss_dssp             EEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHHHHHHHHHH
T ss_pred             EEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHHHHHHHHHH
Confidence            9999998776553 788999999999999999999999999988642   2  48999999999988887776644    


Q ss_pred             -hhhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccccccccC------CCccccccchhh
Q psy2273         267 -TWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDSSSWTKN------PNSIFSDKSQYA  339 (434)
Q Consensus       267 -~le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~~~~t~~------~~si~~~~~~~~  339 (434)
                       .++++      |+.+||+.+||+|+  +|+|+.    ||||||||++|+|+.++...-+..      -..+..++--+.
T Consensus       256 ~~~e~~------fG~pYP~~k~diVa--vPdf~~----GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHq  323 (891)
T 3b34_A          256 KWDEER------FGLEYDLDIYMIVA--VDFFNM----GAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHN  323 (891)
T ss_dssp             HHHHHH------HCCCCCSSEEEEEE--ESCCSS----SEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHH------hCCCCCCcceeEEE--cCCCCc----CccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHH
Confidence             24555      55577999999987  699995    999999999999998874211100      025667888899


Q ss_pred             eeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCc--ccccc---cccccccccccCCcCeeccCCcccccCcccc
Q psy2273         340 LVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNS--TFSDK---SQYALGHNIAEGSWPIPVPSNKAVKRLPSEK  414 (434)
Q Consensus       340 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~  414 (434)
                      |+||+||+.||++   .|+|||+++|++...........  .+.+.   ...++..|+...+|||..  +++.+  |.++
T Consensus       324 WFGNlVT~~~W~d---lWLnEGFAtY~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~--i~~~  396 (891)
T 3b34_A          324 WTGNRVTCRDWFQ---LSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRP--DMVIE--MNNF  396 (891)
T ss_dssp             TBTTTEEESSGGG---HHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESC--GGGG
T ss_pred             HhCCCCcccchhh---ceehHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhhhhhccccCCCCcc--ccccc--cccc
Confidence            9999999999998   99999999998422111111100  11110   112456688889999965  34555  8899


Q ss_pred             cccchhHh
Q psy2273         415 FDERSWTN  422 (434)
Q Consensus       415 ~~~~~~~~  422 (434)
                      ||.++|..
T Consensus       397 f~~i~Y~K  404 (891)
T 3b34_A          397 YTLTVYEK  404 (891)
T ss_dssp             CCHHHHHH
T ss_pred             cccchhhH
Confidence            99999975

>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}

Probab=97.88  E-value=6.8e-06  Score=88.35  Aligned_cols=168  Identities=10%  Similarity=-0.000  Sum_probs=101.4

Q ss_pred             CcceEEEEEEecCC---ceEEeecCccceeecCCeEEEEEEccCCCCcee--eEEEEeeeeEeeeeeCCeeEEEEecCCC
Q psy2273         181 FKAYFSLMIRRPHH---MSSLSNMPLLKTAEDGESRVDHFQESMPMSPYL--LCFTVGSFESLTLWDNSIQYKVYAPRND  255 (434)
Q Consensus       181 ~KAtf~lsI~~P~~---~~alSN~~l~~~~~~~g~~~~~F~~t~pmstYL--vA~~vGdf~~~~~~~~g~~~~v~~~~~~  255 (434)
                      -+.+++++|..|++   |++.+..+...... .+..  +|....-  -.|  --+.+|+|+..+.+..|++++++.....
T Consensus       119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~-~~~~--~f~a~~y--d~LvDsPv~~G~~~~~~~~~~g~p~~l~v~~~~  193 (597)
T 4fgm_A          119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQP-HSWG--CFRADNY--DALIDYPFLIGDLTIEEFIAHGIKHSLVLSGRH  193 (597)
T ss_dssp             TTSCEEEEECCCTTCTTCEEEESSCBCSSCT-TSSE--EEEESSH--HHHTTCCEEEESCEEEEEEETTEEEEEEEESSC
T ss_pred             cCCcEEEEEECCCCCCcceEEecCCccCCCC-Ccce--EEEcCCH--HHHhcchhcccCcEEEEeccCCeEEEEEEEcCC
Confidence            45679999999999   99888876543211 1322  3333110  001  1247899998887778888776444321


Q ss_pred             ccccccCC-Cch----hhhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccc--eEeecCccccccccc--
Q psy2273         256 STSWTKNP-DGS----TWENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWEN--AIQKSSQNDSSSWTK--  326 (434)
Q Consensus       256 ~~~~~~al-d~~----~le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGl--i~~rEs~l~~~~~t~--  326 (434)
                      ....+... +..    .++.+      |+ +||+.+|+.++. ++++.    .|||||.+.  +++.+..+.....+.  
T Consensus       194 ~~d~~~~~~~~~~~~~~~~~~------fG-~yP~~~Y~fl~~-~~~~~----~GgmEh~~st~l~~~~~~l~~~~~~~~~  261 (597)
T 4fgm_A          194 YADTSRITADLAKICETQISL------FE-EAPFQSYTFLTM-VVGNG----FGGLEHRNSTALLCSRKDLISAHQYEMN  261 (597)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHH------HT-SCSCSEEEEEEE-EESSC----CEEEECSSEEEEEEEGGGSCCTTCCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHH------hC-CCCCCceEEEEE-ccCCC----CcccccCCceEEEeCchhccccccccch
Confidence            11111111 111    13333      44 689999998876 45556    499999987  447776554221110  


Q ss_pred             ----CCCccccccchhheecccee-----------ecCCCCCcchhhhhhhhhhcCC
Q psy2273         327 ----NPNSIFSDKSQYALVKNLMS-----------VPGSNKPAGSWENAIQKSSQND  368 (434)
Q Consensus       327 ----~~~si~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~  368 (434)
                          ..-+++.++--+.|++|.++           ..||..   .|++||+++|+.+
T Consensus       262 ~~~~~~~~liaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~---lWl~EG~t~Y~~~  315 (597)
T 4fgm_A          262 DNYQTFLSLCCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQ---LWFYEGMTSYFDD  315 (597)
T ss_dssp             HHHHHHHHHHHHHHHHTTBTTTBCBGGGSSCCCSSCCCCST---HHHHTHHHHHHHH
T ss_pred             hhhhchhhhHhhhhheeeccccccccccccccccccccccc---chhhhhHHHHHHH
Confidence                11356778888888886654           445565   9999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	434
d3b7sa2	208	b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term	2e-15

>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208

class: All beta proteins
fold: Leukotriene A4 hydrolase N-terminal domain
superfamily: Leukotriene A4 hydrolase N-terminal domain
family: Leukotriene A4 hydrolase N-terminal domain
domain: Leukotriene A4 hydrolase N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 153 WVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT---AED 209
              E     +  +    R + PC D P  K  ++  +  P  + +L +          ED
Sbjct: 124 SGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPED 183

Query: 210 GESRVDHFQESMPMSPYLLCFTVGS 234
              ++  F + +P+  YL+   VG+
Sbjct: 184 PSRKIYKFIQKVPIPCYLIALVVGA 208

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	434
d3b7sa2	208	Leukotriene A4 hydrolase N-terminal domain {Human	100.0
d3b7sa3	252	Leukotriene A4 hydrolase catalytic domain {Human (	99.67

>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Leukotriene A4 hydrolase N-terminal domain
superfamily: Leukotriene A4 hydrolase N-terminal domain
family: Leukotriene A4 hydrolase N-terminal domain
domain: Leukotriene A4 hydrolase N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=281.41  Aligned_cols=179  Identities=16%  Similarity=0.212  Sum_probs=141.1

Q ss_pred             CCcccccCCCC-CceEEEEEEEEcCCCCcEEEEEEEEEEE-------EeccccceeeeeeEEEcceec----------CC
Q psy2273          53 DGVHYVWTQLR-PATHYQVDLTGGTYQPYLSGLPDSDLLA-------LVLSTHEVQSQSSVEVGQSFV----------NP  114 (434)
Q Consensus        53 ~~~~y~lp~~~-lp~hYdL~L~ld~~~~~fsG~vtI~~~~-------i~l~~~~L~~i~sV~v~~~~~----------ng  114 (434)
                      |.-+|+.|... .+.||+|+|++|+++++|+|+++|++++       |.||+.+|+ |.+|.+++...          .|
T Consensus         5 d~~~~~~p~~~~~v~Hy~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~-I~~v~~~g~~~~~~~~~~~~~~~   83 (208)
T d3b7sa2           5 DTCSLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLT-IEKVVINGQEVKYALGERQSYKG   83 (208)
T ss_dssp             CTTCCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCE-EEEEEETTEECCEEECCCCGGGC
T ss_pred             CccccCCccccceEEEEEEEEEEcCCCCEEEEEEEEEEEECcCCccEeeeeccCCE-EEEEEECCcccceEeccceeecc
Confidence            44566777655 4999999999999999999999999983       778888888 88888844210          11


Q ss_pred             ceeeeecCCCCCCCCC--eEEEEEeeec-ccceeeeeeeecCCCeeEEEEeccccCCccEEEEcCCCCCCcceEEEEEEe
Q psy2273         115 NVVPIFDGHSGLPDSD--LLALDVFEKV-AAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR  191 (434)
Q Consensus       115 ~~l~~~~~~~~lp~~~--~L~I~y~g~~-~~G~y~~~~~~~dG~~~yl~~Tq~ep~~AR~~FPCfDeP~~KAtf~lsI~~  191 (434)
                      +.+.+ .....+..+.  .|+|.|.+.+ ..|+|...+.+.+|+..++++|||||.+||+||||||+|++||+|+++|++
T Consensus        84 ~~l~i-~~~~~~~~g~~~~l~i~y~~~~~~~g~~~~~~~~~~~~~~~~~~Tq~ep~~AR~~fPC~DeP~~Katf~l~i~~  162 (208)
T d3b7sa2          84 SPMEI-SLPIALSKNQEIVIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSV  162 (208)
T ss_dssp             EEEEE-EEEEEECTTCEEEEEEEEECCTTCTTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEEEEE
T ss_pred             ceeee-ecccccCCCCEEEEEEEEEEecCCCCccEEeeecCCCccceEEEEcCCCccceEEEEcCCCCCeeeEEEEEEEE
Confidence            12221 1112233343  3899999987 478887666666666655666999999999999999999999999999999


Q ss_pred             cCCceEEeecCccceeec---CCeEEEEEEccCCCCceeeEEEEe
Q psy2273         192 PHHMSSLSNMPLLKTAED---GESRVDHFQESMPMSPYLLCFTVG  233 (434)
Q Consensus       192 P~~~~alSN~~l~~~~~~---~g~~~~~F~~t~pmstYLvA~~vG  233 (434)
                      |++|+|+|||++.+....   +++++++|++++|||+||+||+||
T Consensus       163 p~~~~~vsn~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~af~vG  207 (208)
T d3b7sa2         163 PKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVG  207 (208)
T ss_dssp             ETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEE
T ss_pred             CCCCEEEeCCCcccceecccCCCcEEEEEeCCCCcchHheeEEEc
Confidence            999999999988755432   678999999999999999999999

>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=9.8e-19  Score=165.30  Aligned_cols=165  Identities=7%  Similarity=-0.019  Sum_probs=126.1

Q ss_pred             CeeEEEEecCCCccccccCCCchh--hhhhhccccccCCCCCccceeeeEEcCCCCCCCCCCCcccCccceEeecCcccc
Q psy2273         244 SIQYKVYAPRNDSTSWTKNPDGST--WENARNSTSSWTKNLDRTTWDNIEKGPQNYSSSWTNKPAGSWENAIQKSSQNDS  321 (434)
Q Consensus       244 g~~~~v~~~~~~~~~~~~ald~~~--le~yf~~~~~~~~kyp~~k~DqV~v~vPdF~~~~~~gamENwGli~~rEs~l~~  321 (434)
                      |++++||++|+..+.++++++...  ++.|   +.+++ +||+.|||+|++ .|+|..    |||||||+++++|+.+..
T Consensus         7 g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~---e~~~g-~YP~~k~d~v~~-~~~~~~----ggmE~~~l~~~~~~~~~~   77 (252)
T d3b7sa3           7 GPRTLVWSEKEQVEKSAYEFSETESMLKIA---EDLGG-PYVWGQYDLLVL-PPSFPY----GGMENPCLTFVTPTLLAG   77 (252)
T ss_dssp             ETTEEEEECGGGHHHHHHHTTTHHHHHHHH---HHHHC-CCCSSCCEEEEC-CTTCSS----SEECCTTEEEECGGGCCS
T ss_pred             CCceEEEEccchHHHHHHHHHHHHHHHHHH---HHhCC-CCCchhcCEEEe-CCCccc----cccccceeeeecchhccc
Confidence            899999999999999988877652  2221   23354 689999999986 688884    999999999999987763


Q ss_pred             cccccCCCccccccchhheeccceeecCCCCCcchhhhhhhhhhcCCCCCcccCCCcc-----cccccccccccccccCC
Q psy2273         322 SSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNST-----FSDKSQYALGHNIAEGS  396 (434)
Q Consensus       322 ~~~t~~~~si~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~s  396 (434)
                      .   .....+..++-.+.|+||+||+.||++   .|++|++++|++........+...     +..-...++..|+....
T Consensus        78 ~---~~~~~~iaHE~aHqWfG~~Vt~~~w~~---~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (252)
T d3b7sa3          78 D---KSLSNVIAHQISHSWTGNLVTNKTWDH---FWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGET  151 (252)
T ss_dssp             S---STTTHHHHHHHHTTTBTTTEEESSGGG---HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred             c---chHHHHHHHHHHHHHHhhhceeccccc---hHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhcc
Confidence            2   223457789999999999999999999   999999999997554443333321     11223456777999999


Q ss_pred             cCeeccCCcccccCcccccccchhHhh
Q psy2273         397 WPIPVPSNKAVKRLPSEKFDERSWTNF  423 (434)
Q Consensus       397 ~~i~~~~~~~~~~~~~~~~~~~~~~~~  423 (434)
                      ||+..++..+...-+...|+.++|..=
T Consensus       152 ~~~~~~~~~~~~~~~~~~f~~~~Y~Kg  178 (252)
T d3b7sa3         152 HPFTKLVVDLTDIDPDVAYSSVPYEKG  178 (252)
T ss_dssp             CGGGSSSCCCTTCCHHHHCSSHHHHHH
T ss_pred             CCcceeeccccccchhhcccceeecch
Confidence            999999887776546678999998753